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Microscopy
By- Kanhaya Kumawat
M.Tech. ICT Mumbai
Three branches of Microscopy
• Optical
• Electron
• Scanning Probe
• Optical and Electron microscopy measure
refraction, diffraction, and reflection of the
source radiation
– Optical uses white light, fluorescent light, or
lasers
– EM uses electron beams
• Scanning uses a physical probe to interact
with the surface of the specimen
Type Probe Technique Best Resolution Penetration Uses and Constraints
Optical Microscopy Visible Light Detect reflected light (opaque
samples) or transmitted light
(transparent samples).
Light focused using lenses.
~200 nm Surface or volume
(can probe through
transparent
materials)
Near-Field Optical Microscopy (NSOM) Visible Light Detect reflected light (opaque
samples) or transmitted light
(transparent samples).
Uses an aperture very close to the
sample surface.
~10 nm Surface or volume
(can probe through
transparent
materials)
Biological samples.
X-Ray Microscopy (TXM, SXM, STXM) X-Rays Image derived from x-ray scattering or
interference patterns.
X-rays focused using a “zone plate”
(Fresnel lens).
~20 nm Surface or volume
(x-rays can
penetrate some
materials)
Can be tuned to specific frequencies
to provide element identification and
mapping.
Scanning Electron Microscopy (SEM) Electrons Detect electrons back-scattered by
the sample.
Electrons focused using
electromagnets.
~1 nm Surface Sample must be in a vacuum.
Transmission Electron Microscopy (TEM, STEM) Electrons Detect electrons scattered as they
move through the sample.
Electrons focused using
electromagnets.
~0.05 nm Volume Samples must be <100 nm thick.
Focused Ion Beam (FIB) Ions Detect ions back-scattered by the
sample.
Ions focused using electromagnets.
~10 nm Surface Due to the large masses of the ions,
this probe can be destructive to the
surface of the sample. Therefore, it
can also be used to etch the
sample.
Scanning Tunneling Microscopy (STM) Cantilever Tip Detect the quantum tunneling current
of electrons from the sample to the
probe tip.
~0.1 nm Surface Sample must be conductive material
and must be in a vacuum.
Can be used to manipulate atoms
on the sample surface.
Atomic Force Microscopy (AFM) Cantilever Tip Detect the electrostatic force between
the sample and the probe tip.
~0.1 nm Surface Can be used to manipulate atoms
on the sample surface.
Magnetic Force Microscopy (MFM) Cantilever Tip Detect the magnetic force between
the sample and the probe tip.
~10 nm Surface Sample must be ferromagnetic or
paramagnetic.
Types of Microscopy
Note: this table is intended as a simple guide. Actual performance and usage may be different in certain
applications.
AFM
Atomic Force Microscopy
Motivation
• Digitally image a topographical surface
• Determine the roughness of a surface sample or
to measure the thickness of a crystal growth
layer
• Image non-conducting surfaces such as proteins
and DNA
• Study the dynamic behavior of living and fixed
cells
History
• The Scanning Tunneling Microscope (STM) was
invented by G. Binnig and H. Rohrer, for which
they were awarded the Nobel Prize in 1984
• A few years later, the first Atomic Force
Microscope (AFM) was developed by G. Binnig,
Ch. Gerber, and C. Quate at Stanford University
by gluing a tiny shard of diamond onto one end
of a tiny strip of gold foil
• Currently AFM is the most common form of
scanning probe microscopy
How the AFM Works
• The AFM brings a probe
in close proximity to the
surface
• The force is detected by
the deflection of a spring,
usually a cantilever.
• Forces between the
probe tip and the sample
are sensed to control the
distance between the tip
and the sample.
van der Waals force curve
Two Modes
Repulsive (contact)
• At short probe-sample
distances, the forces are
repulsive
Attractive Force (non-contact)
• At large probe-sample
distances, the forces are
attractive
The AFM cantelever can be used
to measure both attractive
force mode and repulsive
forces.
Non-Contact Mode
• Uses attractive forces to
interact surface with tip
• Operates within the
van der Waal radii of the
atoms
• Oscillates cantilever near
its resonant frequency
(~ 200 kHz) to improve
sensitivity
• Advantages over contact:
no lateral forces,
non-destructive/no
contamination to sample,
etc.
van der Waals force curve
Contact Mode
• Contact mode operates in
the repulsive regime of
the van der Waals curve
• Tip attached to cantilever
with low spring constant
(lower than effective
spring constant binding
the atoms of the sample
together).
• In ambient conditions
there is also a capillary
force exerted by the thin
water layer present
(2-50 nm thick). van der Waals force curve
Force Measurement
• The cantilever is designed with
a very low spring constant (easy
to bend) so it is very sensitive to
force.
• The laser is focused to reflect off
the cantilever and onto the
sensor
• The position of the beam in the
sensor measures the deflection
of the cantilever and in turn the
force between the tip and the
sample.
Raster the Tip: Generating an Image
• The tip passes back and forth in
a straight line across the sample
(think old typewriter or CRT)
• In the typical imaging mode, the
tip-sample force is held constant
by adjusting the vertical position
of the tip (feedback).
• A topographic image is built up
by the computer by recording the
vertical position as the tip is
rastered across the sample.
ScanningTipRasterMotion
Scanning the Sample
• Tip brought within nanometers
of the sample (van der Waals)
 Radius of tip limits the
accuracy of analysis/
resolution
 Stiffer cantilevers protect
against sample damage
because they deflect less in
response to a small force
 This means a more sensitive
detection scheme is needed
 measure change in resonance
frequency and amplitude of
oscillation
OU NanoLab/NSF NUE/Bumm & Johnson
AFM Machine
Some Pictures
2D topographical image of
Atomic Step 3D Image
The Good Examples
View of Silicon Surface Reconstruction
Carbon Nanotube Used as a Conducting
AFM Tip for Local Oxidation of Si.
The Bad Examples
Histogram shows level surface, but
scan is very streaky
Typically the sample will have a slight tilt
with respect to the AFM. The AFM can
compensate for this tilt.
The horizontal lines are due to tip hops –
where the tip picks up or loses a small
“nanodust”
In this image the tilt have not yet
been removed.
Topography Scanning
Example of generated
image upon scanning
Pd thermally evaporated on Si
OU NanoLab/NSF NUE/Bumm & Johnson
This targets the highest points of the
sample and eliminates them
It then manipulates the image to
create a smaller dynamic depth
extreme
(Height)
Centering on pt.
Elimination of Extreme Points
A Better View
Now:
• Removed extreme points
• Digitally decreased the
height of analysis
• Less than 1/3 as high
as initial scan
•Lose resolution and data
by clipping off extreme
points
OU NanoLab/NSF NUE/Bumm & Johnson
Si/Pd step
Thickness of a Thin Layer
of Pd on Si Wafer
Step (where Pd coating ends)
Systematic error
Surface Roughness
Roughness typically measured
as root mean squared (RMS)
10/10
CW
10/25
10/50
29
Mean Surface Roughness
30
Other Types of SPM Techniques
• Lateral Force Microscopy (LFM)
– Frictional forces measured by twisting or “sideways” forces on
cantilever.
• Magnetic Force Microscopy (MFM)
– Magnetic tip detects magnetic fields/measures magnetic properties
of the sample.
• Electrostatic Force Microscopy (EFM)
– Electrically charged Pt tip detects electric fields/measures dielectric
and electrostatic properties of the sample
• Chemical Force Microscopy (CFM)
– Chemically functionalized tip can interact with molecules on the
surface – giving info on bond strengths, etc.
• Near Field Scanning Optical Microscopy (NSOM)
– Optical technique in which a very small aperture is scanned very
close to sample
– Probe is a quartz fiber pulled to a sharp point and coated with
aluminum to give a sub-wavelength aperture (~100 nm)
STM modes
constant current
constant height
AFM modes
contact
non-contact
SPM lithography
STM lithography
AFM lithography – scratching
AFM lithography – Dynamic Plowing
SPM techniques (NT-MDT)
visit these links for animations
Carbon Nanotube Tips
 Well defined shape and composition.
 High aspect ratio and small radius of curvature (“perfect” tip would be a delta
function tip).
 Mechanically robust.
 Chemical functionalization at tip.
DNA
CNT Tips
Cantilever Gas Sensors (Noses)
Thank
you