rephetio

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Here are 42 public repositories matching this topic...

hetio / hetionet

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Hetionet: an integrative network of disease

neo4j network rephetio hetionet hetnet drug-repurposing data-integration

Updated Apr 3, 2023
HTML

dhimmel / drugbank

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User-friendly extensions of the DrugBank database

rephetio drugbank drugs compounds terminology

Updated May 17, 2019
HTML

dhimmel / obonet

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OBO-formatted ontologies → networkx (Python 3)

python parser network ontology networkx rephetio obo obo-formatted-ontologies obo-files

Updated Jun 3, 2026
Python

hetio / hetnetpy

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Hetnets in Python (relocated from dhimmel/hetio)

python graph rephetio hetnet heterogeneous-network edge-prediction

Updated Sep 4, 2025
Python

dhimmel / integrate

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Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing

neo4j network rephetio hetionet hetnet drug-repurposing data-integration

Updated Sep 22, 2017
Jupyter Notebook

dhimmel / lincs

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Library of Integrated Cellular Signatures L1000

gene-expression lincs l1000 rephetio

Updated Apr 21, 2022
Jupyter Notebook

dhimmel / clintrials

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Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov

gov rephetio drug-repurposing disease clinical-trials drug indications

Updated Jun 17, 2016
Jupyter Notebook

dhimmel / disgenet

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Processing the DisGeNET database of disease–gene association

rephetio hetionet genes disease disgenet disease-gene-association associations

Updated Mar 26, 2016
Jupyter Notebook

dhimmel / SIDER4

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Processing SIDER 4.1: the side effect resource

rephetio drug side-effect compound sider sider4

Updated Feb 3, 2016
Jupyter Notebook

dhimmel / hsdn

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Analysis of the human symptoms–disease network

network rephetio disease medline symptoms hsdn

Updated Feb 23, 2017
HTML

dhimmel / indications

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Processing high-throughput drug indication resources.

medicine rephetio drug-repurposing indications pharmacotherapydb

Updated Mar 15, 2016
HTML

dhimmel / disease-ontology

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User-friendly extensions to the Disease Ontology

human ontology rephetio hetionet disease-ontology do-slim

Updated Sep 9, 2016
Web Ontology Language

hetio / medline

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Computing term cooccurrence in MEDLINE

text-mining pubmed rephetio hetionet literature diseases medline cooccurrence symptoms anatomy

Updated Apr 13, 2021
Jupyter Notebook

dhimmel / mesh

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User-friendly extensions to MeSH

ontology mesh rephetio hetionet medical-subject-headings

Updated Feb 4, 2016
Jupyter Notebook

dhimmel / bindingdb

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Process BindingDB

tsv binding protein rephetio hetionet drug compound bindingdb

Updated Nov 19, 2015
HTML

dhimmel / gene-ontology

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User-friendly Gene Ontology annotations

github-pages annotations ontology gene-ontology rephetio genes

Updated Dec 6, 2024
Jupyter Notebook

hetio / het.io

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Source code for https://het.io website

github-pages website rephetio hetionet hetnet hetio

Updated Jun 23, 2026
HTML

dhimmel / rephetio-manuscript

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Markdown source for the Project Rephetio Manuscript https://doi.org/10.7554/eLife.26726

markdown rephetio manuscript manubot

Updated Jan 31, 2023
HTML

dhimmel / rephetio

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Miscellaneous Content for Project Rephetio to repurpose drugs

rephetio thinklab drug-repurposing disease miscellaneous

Updated Jan 9, 2023
Jupyter Notebook

dhimmel / drugcentral

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Converting DrugCentral data to Rephetio identifiers

tsv data rephetio hetionet disease indications drugs compounds mappings drugcentral pharmacologic-class

Updated Mar 9, 2017
Jupyter Notebook

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