research-software

AIPOCH Open-Science is an open-source, local-first, model-agnostic AI research workbench for macOS, Windows, and Linux, with scientific agents, Python/R notebooks, data connectors, and reproducible provenance.

Autonomous LLM Trading Asterism — a research-only virtual trading platform with specialized LLM agents, evidence-first opportunity discovery, replayable decisions, and a bilingual operator console.

Deterministic, resource-governed per-locus genomics analyses with transactional artifacts, receipts, replay, Arrow, and reproducible sharding.

Netherlands eScience Center Python Template

Relational Workflows: where database schemas define executable data pipelines.

The Simulation and Image Processing for Photonics and Acoustics (SIMPA) toolkit.

A research python package for detecting, categorizing, and assessing the severity of personal identifiable information (PII)

Python library for simulating heat transfer processes

VeriRepro: Evidence-grounded reproduction for computational papers.

Softcite software mention recognizer, finding mentions and citations to software from within the academic literature

PyTorch research stack for ML multi-factor trading: 213 factors, bias correction, portfolio optimization, and vectorized backtesting.

Free open collaborative qualitative data analysis software

Command line tool to analyze a GitHub or GitLab repository's compliance with the fair-software.eu recommendations

An unofficial, source-backed AI Agent Skill for generating and auditing Elsevier-style manuscript figures.

Research Software Quality Kit - a resource for helping researchers improve the quality of software they write

NovoWeave — a conceptual generative protein-design framework (non-functional pseudocode).

Python package template for new research software projects

Software Development Guide

Unified Python/CLI time-series decomposition library with native acceleration, multivariate workflows, and machine-readable outputs.

Open-source quantum Agent workspace with a desktop client, Web UI, messaging, Qiskit/MCP tools, and scientific validation