pharmacogenomics

The Pharmacogenomic Clinical Annotation Tool

A Python package for pharmacogenomics (PGx) research

A tool to genotype CYP2D6 with WGS data

PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction prediction

This repository is the collection point of reference data for the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G protein-coupled receptors (GPCRs).

Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G protein-coupled receptors (GPCRs).

Text mining for pharmacogenomic associations for PharmGKB

A phase-aware pharmacogenomic diplotyper for PacBio datasets

💊🧬 PharMe - Pharmaceutical insights tailored to your personal genome

Velodrome combines semi-supervised learning and out-of-distribution generalization (domain generalization) for drug response prediction and pharmacogenomics

rvDNA — AI-native genomic analysis in pure Rust + WASM: biomarker risk scoring, 23andMe genotyping, CYP2D6/CYP2C19 pharmacogenomics, variant calling, protein prediction, epigenomics, and HNSW vector search.

Whole genome sequencing analysis pipeline for consumer hardware. 100% local, Docker-powered, free and open source.

A clinical decision-support system to identify pharmacogenomics profiles based on subjects genotype of five core genes. The paper has been published in the Journal of Personalized Medicine.

PGxCorpus, a manually annotated corpus, designed for the extraction of pharmacogenomic relations from text.

Local-first DNA and VCF analysis copilot for evidence-bound genomics workflows, confidence tiers, and Claude/Codex support.

Clinical VCF variant annotation platform integrating Ensembl VEP, ClinVar, 3D PDB structural mapping, pharmacogenomics (PGx), and precision oncology clinical trials.

DWFA consensus algorithm for pb-StarPhase

R scripts included in a bioinformatics pipeline for differential PGx analysis of cancer drug response

Privacy-first pharmacogenomics web app. Your DNA never leaves your device.