Name	Name	Last commit message	Last commit date
Latest commit History 3 Commits
20120313_evaluate_duplication_for_RefSeq_gene.py	20120313_evaluate_duplication_for_RefSeq_gene.py
CE_events.py	CE_events.py
LICENSE	LICENSE
PIC_to_genefile.py	PIC_to_genefile.py
README.md	README.md
add_exons_to_flanking_intron_file.py	add_exons_to_flanking_intron_file.py
all_to_fasta.py	all_to_fasta.py
allelic_power.py	allelic_power.py
calcExonInclRate.py	calcExonInclRate.py
calc_PSI.py	calc_PSI.py
check_dinucl.py	check_dinucl.py
clean_fasta.py	clean_fasta.py
collate_expr.py	collate_expr.py
compare_t_stats.py	compare_t_stats.py
compute_rho.py	compute_rho.py
contingency_test.py	contingency_test.py
conv2bin.py	conv2bin.py
count_dinucleotides.py	count_dinucleotides.py
count_in_features.py	count_in_features.py
count_in_features_v2.py	count_in_features_v2.py
createGTF.py	createGTF.py
create_ps_detail_pic.py	create_ps_detail_pic.py
dec2bin.py	dec2bin.py
dinucleotide_proportions.py	dinucleotide_proportions.py
estimate_inc_excl_rate.py	estimate_inc_excl_rate.py
excl_genes.py	excl_genes.py
exon_lengths.py	exon_lengths.py
exon_stats_by_class.py	exon_stats_by_class.py
exons_enumerate.py	exons_enumerate.py
exons_to_genes.py	exons_to_genes.py
extend_data.py	extend_data.py
fasta_from_gtf.py	fasta_from_gtf.py
filter_by_list.py	filter_by_list.py
filter_column_valued.py	filter_column_valued.py
filter_gtf.py	filter_gtf.py
find_motifs.py	find_motifs.py
find_next_exonic_probeset.py	find_next_exonic_probeset.py
find_next_exonic_probeset2.py	find_next_exonic_probeset2.py
find_next_exonic_probeset3.py	find_next_exonic_probeset3.py
fix_GTF.py	fix_GTF.py
gene2exons.py	gene2exons.py
geneProteins.py	geneProteins.py
gene_exons.py	gene_exons.py
gene_introns_from_gene_exons.py	gene_introns_from_gene_exons.py
gene_lengths.py	gene_lengths.py
genefile_to_PIC.py	genefile_to_PIC.py
generate_paired_samples_from_shuffles.py	generate_paired_samples_from_shuffles.py
generate_qqplots.py	generate_qqplots.py
generate_shuffles.py	generate_shuffles.py
generate_uniques_from_shuffles.py	generate_uniques_from_shuffles.py
genes.py	genes.py
get_const_alt_exons.py	get_const_alt_exons.py
get_exon_coords_and_sequence.py	get_exon_coords_and_sequence.py
get_feature_length.py	get_feature_length.py
get_features.py	get_features.py
get_genes.py	get_genes.py
get_lowinc_ps.py	get_lowinc_ps.py
get_random_lines.py	get_random_lines.py
gtf_from_exonic.py	gtf_from_exonic.py
gtf_to_params.py	gtf_to_params.py
intronLen2ExonInclRate.py	intronLen2ExonInclRate.py
intron_length.py	intron_length.py
intron_scores_by_flank.py	intron_scores_by_flank.py
intron_scores_by_flank2.py	intron_scores_by_flank2.py
isolate_introns_by_length.py	isolate_introns_by_length.py
key_functions.py	key_functions.py
key_functions.pyc	key_functions.pyc
make_full_dinucls.py	make_full_dinucls.py
metaprobeset_to_gene.py	metaprobeset_to_gene.py
minimal_ID_list.py	minimal_ID_list.py
modified_exon_lengths.py	modified_exon_lengths.py
mps_to_gene.py	mps_to_gene.py
mr_jxns.py	mr_jxns.py
n-ary_arithmethic.py	n-ary_arithmethic.py
name_change.py	name_change.py
no_ps_and_length.py	no_ps_and_length.py
p_value.py	p_value.py
perform_stat_test.py	perform_stat_test.py
pick_random_from_col.py	pick_random_from_col.py
platform_comparison.py	platform_comparison.py
prepare_subjob.py	prepare_subjob.py
probeset_to_exon.py	probeset_to_exon.py
probeset_to_gene.py	probeset_to_gene.py
quick_logFC_exonlength.py	quick_logFC_exonlength.py
random_genes.py	random_genes.py
rank_samples_by_expression.py	rank_samples_by_expression.py
readPickles.py	readPickles.py
regions_from_jxn_reads.py	regions_from_jxn_reads.py
remove_duplicate_probesets.py	remove_duplicate_probesets.py
remove_duplicate_probesets2.py	remove_duplicate_probesets2.py
rpkm.py	rpkm.py
separate_splice_sites.py	separate_splice_sites.py
shuffle_test.py	shuffle_test.py
simple_non_redundant_exons.py	simple_non_redundant_exons.py
subsample_reads.py	subsample_reads.py
tableTex.py	tableTex.py
tableTex2.py	tableTex2.py
test_multiproc.py	test_multiproc.py
test_no_multiproc.py	test_no_multiproc.py
ttest_with_averaging.py	ttest_with_averaging.py

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3 Commits

20120313_evaluate_duplication_for_RefSeq_gene.py

add_exons_to_flanking_intron_file.py

all_to_fasta.py

allelic_power.py