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So I kind of fixed it on my own. After rebooting my NAS system again and also starting the project container new I've got it working with the following compose file:

services:
    otbr:
        image: openthread/border-router:latest
        container_name: otbr
        network_mode: host
        privileged: true
        restart: always
        volumes:
            - /volume1/docker/otbr/:/data/
        environment:
            - TZ:Europe/Berlin
            - OT_RCP_DEVICE=spinel+hdlc+uart:///dev/ttyACM0?uart-baudrate=460800
            - OT_INFRA_IF=eth0
            - OT_THREAD_IF=wpan0
            - OT_LOG_LEVEL=7
            - OT_REST_LISTEN_ADDR=0.0.0.0
            - OT_REST_LISTEN_PO…

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Answer selected by Antiunfall
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