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kepra3/README.md
  • 👋 Hi, I’m Kat Prata.
  • 👀 I’m interested in population genomics, dispersal, demographic history inference, and conservation.
  • 🌱 I’m currently working on using ancestral recombination graphs to study drivers of adaptation and diversity in coral reefs and Southern Ocean benthos in Antarctica.
  • 💞️ I’m looking to collaborate on pop gen studies or programming and bioinfomatics teaching.
  • 📫 How to reach me katharine.prata@jcu.edu.au

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  1. dispersal-distances dispersal-distances Public

    A pipeline for estimating dispersal distance and local effective population size from georeferenced genetic and genomic data.

    R 1

  2. popgen_rad_shallow_agaricia popgen_rad_shallow_agaricia Public

    Analysis scripts and datasets for Prata et al (2024)

    R 4

  3. kp_dadi kp_dadi Public

    A workflow for manually optimising the Diffusion Approximations for Demographic Inference (dadi) regarding population genomics analyses.

    Python 6 3

  4. coralscape coralscape Public

    Custom scripts for measuring coral reef microhabitat structural complexity using open3D and numpy.

    Python 3 1