Our projects
Current projects
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Completed projects
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Gap analysis, training materials development and training delivery
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Alignment of the Interoperability Platform FAIR Service Architecture Framework with the Data Platform, Communities, and ELIXIR Projects
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FAIR-IMPACT
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BioDT
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BY-COVID
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FAIRplus
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European Joint Programme on Rare Diseases
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EOSC-life
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ELIXIR-CONVERGE
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Leading
BioFAIR
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Leading
ELIXIR-UK DaSH
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Biodiversity networks for ELIXIR
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Tools Platform Ecosystem
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Food and nutrition: microbiome – diet – health
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Metrics discovery and implementation in life sciences
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Bioschemas
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ELIXIR integration from a user perspective
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Mapping the landscape of biocuration in ELIXIR: Practice, capability and training requirements
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Bioschemas: community adoption and training
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Enabling the reuse, extension, scaling, and reproducibility of scientific workflows
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FAIRness of the current ELIXIR core resources: Application (and test) of newly available FAIR metrics, and identification of steps to increase interoperability
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Developing learning paths for users of ELIXIR services
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Increasing interoperability between ELIXIR protein structure and sequence resources and expanding these resources with 3D-Models of CATH domains, built by SWISS-MODEL
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Data validation
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Exploiting Bioschemas markup to support ELIXIR Communities
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Container orchestration
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FAIR service architecture
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Interoperability with a purpose
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Training capacity building
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ELIXIR Federated Human Data
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Expanding the Galaxy: meeting (the needs of) ELIXIR Communities
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First hCNV Community implementation study
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Standardising the fluxomics workflows
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Training toolkit
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Training technical infrastructure – TeSS
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Capacity building
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3D-BioInfo Community implementation study
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Microbial Biotechnology Community implementation study
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Beacon and beyond — Implementation-driven standards and protocols for CNV discovery and data exchange
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Building on PDBe-KB to chart and characterize the conformational landscape of native proteins
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Making container services integratable, sustainable and widely adopted
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Strengthen data management in Galaxy
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Reference hCNV datasets, use-case workflows and benchmarking
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Impact evaluation at Node-level – getting it done
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Increasing plant data findability and reuse beyond ELIXIR
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APICURON integration with curation databases
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ELIXIR Beacon Implementation Study: disseminating the Beacon and ELIXIR Beacon Network (EBN)
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ELIXIR Beacon infrastructure service plan
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ELIXIR hybrid cloud
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Data integration
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An ELIXIR Interoperability Platform Knowledge Hub
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Packaging, containerisation and deployment
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The Federated EGA framework: supporting sensitive data management across the ELIXIR Nodes
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Scalable extraction of human genetic and phenotypic data from peer-reviewed literature
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Curation of Lipid Pathways by domain experts to generate open access biology resources
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ELIXIR Rare Disease Community services and international collaborations
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TeSS – The ELIXIR training portal
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Training toolkit
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Consolidating quality and impact of the TeSS training resources
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Training capacity building
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A framework to standardize Machine Learning in life sciences
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Single-Cell Omics Network for ELIXIR (SCONE)
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Systems Biology for ELIXIR (SYBEL)
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DATAREX – Data Management for Research in ELIXIR
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Integrating the Toxicology Community into ELIXIR