diff --git a/.buildinfo b/.buildinfo new file mode 100644 index 0000000..44ceeaa --- /dev/null +++ b/.buildinfo @@ -0,0 +1,4 @@ +# Sphinx build info version 1 +# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done. +config: 1ef645928583e3be67b1bde0474e3121 +tags: 645f666f9bcd5a90fca523b33c5a78b7 diff --git a/.cruft.json b/.cruft.json deleted file mode 100644 index 58337c3..0000000 --- a/.cruft.json +++ /dev/null @@ -1,46 +0,0 @@ -{ - "template": "https://codebase.helmholtz.cloud/psyplot/psyplot-plugin-template.git", - "commit": "63fa8a2b3c1bab8e173cb91b9fca045639a243dd", - "checkout": null, - "context": { - "cookiecutter": { - "project_authors": "Philipp S. Sommer", - "project_author_emails": "philipp.sommer@hereon.de", - "project_maintainers": "Philipp S. Sommer", - "project_maintainer_emails": "philipp.sommer@hereon.de", - "gitlab_host": "codebase.helmholtz.cloud", - "gitlab_username": "psyplot", - "git_remote_protocoll": "ssh", - "institution": "Helmholtz-Zentrum Hereon", - "institution_url": "https://www.hereon.de", - "copyright_holder": "Helmholtz-Zentrum hereon GmbH", - "copyright_year": "2021-2024", - "use_reuse": "yes", - "code_license": "LGPL-3.0-only", - "documentation_license": "CC-BY-4.0", - "supplementary_files_license": "CC0-1.0", - "project_title": "psyplot-gui", - "project_slug": "psyplot-gui", - "package_folder": "psyplot_gui", - "project_short_description": "Graphical user interface for the psyplot package", - "keywords": "visualization,psyplot,netcdf,raster,cartopy,earth-sciences,pyqt,qt,ipython,jupyter,qtconsole", - "documentation_url": "https://psyplot.github.io/psyplot-gui", - "use_markdown_for_documentation": "no", - "ci_build_stage": "no", - "ci_matrix": "pipenv", - "use_pytest_xdist": "no", - "requires_gui": "yes", - "deploy_package_in_ci": "yes", - "deploy_pages_in_ci": "git-push", - "_extensions": [ - "local_extensions.UnderlinedExtension" - ], - "_template": "https://codebase.helmholtz.cloud/psyplot/psyplot-plugin-template.git" - } - }, - "directory": null, - "skip": [ - ".git", - ".mypy_cache" - ] -} diff --git a/.cruft.json.license b/.cruft.json.license deleted file mode 100644 index 919c9c1..0000000 --- a/.cruft.json.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH - -SPDX-License-Identifier: CC0-1.0 diff --git a/.flake8 b/.flake8 deleted file mode 100644 index 18607ff..0000000 --- a/.flake8 +++ /dev/null @@ -1,10 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -[flake8] -extend-ignore = - E203 - E402 - E501 - W503 diff --git a/.gitattributes b/.gitattributes deleted file mode 100644 index 9e178d0..0000000 --- a/.gitattributes +++ /dev/null @@ -1,5 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -psyplot_gui/_version.py export-subst diff --git a/.gitignore b/.gitignore deleted file mode 100644 index 0407d0f..0000000 --- a/.gitignore +++ /dev/null @@ -1,158 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -# Byte-compiled / optimized / DLL files -__pycache__/ -*.py[cod] -*$py.class - -# C extensions -*.so - -# Distribution / packaging -.Python -build/ -develop-eggs/ -dist/ -downloads/ -eggs/ -.eggs/ -lib/ -lib64/ -parts/ -sdist/ -var/ -wheels/ -share/python-wheels/ -*.egg-info/ -.installed.cfg -*.egg -MANIFEST - -# PyInstaller -# Usually these files are written by a python script from a template -# before PyInstaller builds the exe, so as to inject date/other infos into it. -*.manifest -*.spec - -# Installer logs -pip-log.txt -pip-delete-this-directory.txt - -# Unit test / coverage reports -htmlcov/ -.tox/ -.nox/ -.coverage -.coverage.* -.cache -nosetests.xml -coverage.xml -*.cover -*.py,cover -.hypothesis/ -.pytest_cache/ -cover/ - -# Translations -*.mo -*.pot - -# Django stuff: -*.log -local_settings.py -db.sqlite3 -db.sqlite3-journal - -# Flask stuff: -instance/ -.webassets-cache - -# Scrapy stuff: -.scrapy - -# Sphinx documentation -docs/_build/ - -# PyBuilder -.pybuilder/ -target/ - -# Jupyter Notebook -.ipynb_checkpoints - -# IPython -profile_default/ -ipython_config.py - -# pyenv -# For a library or package, you might want to ignore these files since the code is -# intended to run in multiple environments; otherwise, check them in: -# .python-version - -# pipenv -# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control. -# However, in case of collaboration, if having platform-specific dependencies or dependencies -# having no cross-platform support, pipenv may install dependencies that don't work, or not -# install all needed dependencies. -#Pipfile.lock - -# PEP 582; used by e.g. github.com/David-OConnor/pyflow -__pypackages__/ - -# Celery stuff -celerybeat-schedule -celerybeat.pid - -# SageMath parsed files -*.sage.py - -# Environments -.env -.venv -env/ -venv/ -ENV/ -env.bak/ -venv.bak/ - -# Spyder project settings -.spyderproject -.spyproject - -# Rope project settings -.ropeproject - -# mkdocs documentation -/site - -# mypy -.mypy_cache/ -.dmypy.json -dmypy.json - -# Pyre type checker -.pyre/ - -# pytype static type analyzer -.pytype/ - -# Cython debug symbols -cython_debug/ - -static/ - -docs/api -psyplot_gui/migrations/00*.py -docs/_static/orcid.* - -# ignore Pipfile.lock files in ci -# if a lock-file needs to be added, add it with `git add -f` -ci/matrix/*/Pipfile.lock - -# rc files -*matplotlibrc -*psyplotguirc.yml -*psyplotrc.yml -*debug_psyplot.log* diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml deleted file mode 100644 index 46916ff..0000000 --- a/.gitlab-ci.yml +++ /dev/null @@ -1,134 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -image: python:3.9 - -variables: - PIP_CACHE_DIR: "$CI_PROJECT_DIR/.cache/pip" - -cache: - paths: - - .cache/pip - -before_script: - # replace git internal paths in order to use the CI_JOB_TOKEN - - apt-get update -y && apt-get install -y pandoc graphviz - - python -m pip install -U pip - -test-package: - stage: test - script: - - pip install build twine - - make dist - - twine check dist/* - artifacts: - name: python-artifacts - paths: - - "dist/*" - expire_in: 7 days - -test: - stage: test - image: "${IMAGE}" - variables: - PIPENV_PIPFILE: "ci/matrix/${SCENARIO}/Pipfile" - # disable sandboxing, otherwise chrome reports errors when the - # container runs as root - # https://doc.qt.io/qt-5/qtwebengine-platform-notes.html#sandboxing-support - QTWEBENGINE_DISABLE_SANDBOX: "true" - script: - # install necessary libraries for pyqt - - apt-get install -y xvfb python3-pyqt5.qtwebengine - - pip install pipenv - - pipenv install - - xvfb-run make pipenv-test - parallel: - matrix: - - SCENARIO: default - IMAGE: python:3.9 - # python scenarios - - SCENARIO: mpl_38_py39 - IMAGE: python:3.9 - - SCENARIO: mpl_38_py310 - IMAGE: python:3.10 - - SCENARIO: mpl_38_py311 - IMAGE: python:3.11 - - SCENARIO: mpl_38_py312 - IMAGE: python:3.12 - # matplotlib scenarios - - SCENARIO: mpl_35_py39 - IMAGE: python:3.9 - - SCENARIO: mpl_36_py310 - IMAGE: python:3.10 - - SCENARIO: mpl_37_py311 - IMAGE: python:3.11 - artifacts: - name: pipfile - paths: - - "ci/matrix/${SCENARIO}/*" - expire_in: 30 days - coverage: '/(?i)total.*? (100(?:\.0+)?\%|[1-9]?\d(?:\.\d+)?\%)$/' - -test-docs: - stage: test - variables: - # disable sandboxing, otherwise chrome reports errors when the - # container runs as root - # https://doc.qt.io/qt-5/qtwebengine-platform-notes.html#sandboxing-support - QTWEBENGINE_DISABLE_SANDBOX: "true" - script: - # install necessary libraries for pyqt - - apt-get install -y xvfb python3-pyqt5.qtwebengine - - make dev-install - # install PyQt5 (not part of requirements.txt because this is complicated - # to install on different platforms) - - pip install PyQt5 PyQtWebEngine - - xvfb-run make -C docs html - - xvfb-run make -C docs linkcheck - artifacts: - paths: - - docs/_build - - -deploy-package: - stage: deploy - needs: - - test-package - - test-docs - - test - only: - - master - script: - - pip install twine - - TWINE_PASSWORD=${CI_JOB_TOKEN} TWINE_USERNAME=gitlab-ci-token python -m twine upload --repository-url ${CI_API_V4_URL}/projects/${CI_PROJECT_ID}/packages/pypi dist/* - - - -deploy-docs: - stage: deploy - only: - - master - needs: - - test-docs - image: node:21 - before_script: - - npm install -g gh-pages@6.1.1 - - mkdir .gh-pages-cache - script: - # make sure, the DEPLOY_TOKEN is defined - - >- - [ ${CI_DEPLOY_TOKEN} ] || - echo "The CI_DEPLOY_TOKEN variable is not set. Please create an access - token with scope 'read_repository' and 'write_repository'" && - [ ${CI_DEPLOY_TOKEN} ] - - >- - CACHE_DIR=$(realpath .gh-pages-cache) - gh-pages - --dotfiles - --nojekyll - --branch gh-pages - --repo https://ci-user:${CI_DEPLOY_TOKEN}@${CI_SERVER_HOST}/${CI_PROJECT_PATH}.git - --user "${CI_COMMIT_AUTHOR}" - --message "CI Pipeline ${CI_PIPELINE_ID}, commit ${CI_COMMIT_SHORT_SHA}" - --dist docs/_build/html diff --git a/psyplot_gui/sphinx_supp/_static/.gitignore b/.nojekyll similarity index 100% rename from psyplot_gui/sphinx_supp/_static/.gitignore rename to .nojekyll diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml deleted file mode 100644 index 48de8fe..0000000 --- a/.pre-commit-config.yaml +++ /dev/null @@ -1,62 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -# https://pre-commit.com/ -repos: - - repo: https://github.com/pre-commit/pre-commit-hooks - rev: v4.4.0 - hooks: - - id: trailing-whitespace - - id: end-of-file-fixer - - id: check-yaml - # isort should run before black as black sometimes tweaks the isort output - - repo: https://github.com/PyCQA/isort - rev: 5.12.0 - hooks: - - id: isort - args: - - --profile - - black - - --line-length - - "79" - - --filter-files - - -skip-gitignore - - --float-to-top - # https://github.com/python/black#version-control-integration - - repo: https://github.com/psf/black - rev: 23.1.0 - hooks: - - id: black - args: - - --line-length - - "79" - - --exclude - - venv - # - repo: https://github.com/keewis/blackdoc - # rev: v0.3.8 - # hooks: - # - id: blackdoc - - repo: https://github.com/pycqa/flake8 - rev: 6.0.0 - hooks: - - id: flake8 - # - repo: https://github.com/pre-commit/mirrors-mypy - # rev: v1.0.1 - # hooks: - # - id: mypy - # additional_dependencies: - # - types-PyYAML - # args: - # - --ignore-missing-imports - - - repo: https://github.com/fsfe/reuse-tool - rev: v1.1.2 - hooks: - - id: reuse - - - repo: https://github.com/citation-file-format/cff-converter-python - # there is no release with this hook yet - rev: "44e8fc9" - hooks: - - id: validate-cff diff --git a/.reuse/add_license.py b/.reuse/add_license.py deleted file mode 100644 index 3757325..0000000 --- a/.reuse/add_license.py +++ /dev/null @@ -1,118 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -"""Helper script to add licenses to files. - -This script can be used to apply the licenses and default copyright holders -to files in the repository. - -It uses the short cuts from the ``.reuse/shortcuts.yaml`` file and -adds them to the call of ``reuse annotate``. Any command line option however -overwrites the config in ``shortcuts.yaml`` - -Usage:: - - python .reuse/add_license.py [OPTIONS] -""" - -import os.path as osp -from argparse import ArgumentParser -from pathlib import Path -from textwrap import dedent -from typing import Dict, Optional, TypedDict - -import yaml -from reuse.project import Project - -try: - from reuse._annotate import add_arguments as _orig_add_arguments - from reuse._annotate import run -except ImportError: - # reuse < 3.0 - from reuse.header import add_arguments as _orig_add_arguments - from reuse.header import run - - -class LicenseShortCut(TypedDict): - """Shortcut to add a copyright statement""" - - #: The copyright statement - copyright: str - - #: year of copyright statement - year: str - - #: SPDX Identifier of the license - license: Optional[str] - - -def load_shortcuts() -> Dict[str, LicenseShortCut]: - """Load the ``shortcuts.yaml`` file.""" - - with open(osp.join(osp.dirname(__file__), "shortcuts.yaml")) as f: - return yaml.safe_load(f) - - -def add_arguments( - parser: ArgumentParser, shortcuts: Dict[str, LicenseShortCut] -): - parser.add_argument( - "shortcut", - choices=[key for key in shortcuts if not key.startswith(".")], - help=( - "What license should be applied? Shortcuts are loaded from " - ".reuse/shortcuts.yaml. Possible shortcuts are %(choices)s" - ), - ) - - _orig_add_arguments(parser) - - parser.set_defaults(func=run) - parser.set_defaults(parser=parser) - - -def main(argv=None): - shortcuts = load_shortcuts() - - parser = ArgumentParser( - prog=".reuse/add_license.py", - description=dedent( - """ - Add copyright and licensing into the header of files with shortcuts - - This script uses the ``reuse annotate`` command to add copyright - and licensing information into the header the specified files. - - It accepts the same arguments as ``reuse annotate``, plus an - additional required `shortcuts` argument. The given `shortcut` - comes from the file at ``.reuse/shortcuts.yaml`` to fill in - copyright, year and license identifier. - - For further information, please type ``reuse annotate --help``""" - ), - ) - add_arguments(parser, shortcuts) - - args = parser.parse_args(argv) - - shortcut = shortcuts[args.shortcut] - - if args.year is None: - args.year = [] - if args.copyright is None: - args.copyright = [] - - if args.license is None and shortcut.get("license"): - args.license = [shortcut["license"]] - elif args.license and shortcut.get("license"): - args.license.append(shortcut["license"]) - args.year.append(shortcut["year"]) - args.copyright.append(shortcut["copyright"]) - - project = Project(Path(__file__).parent.parent) - args.func(args, project) - - -if __name__ == "__main__": - main() diff --git a/.reuse/shortcuts.yaml b/.reuse/shortcuts.yaml deleted file mode 100644 index 43a4548..0000000 --- a/.reuse/shortcuts.yaml +++ /dev/null @@ -1,23 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -.defaults: &defaults - year: "2021-2024" - copyright: "Helmholtz-Zentrum hereon GmbH" - -# The following dictionaries items map to dictionaries with three possible -# keys: -# -# copyright: The copyright statement -# year: year of copyright statement -# license: SPDX Identifier -docs: - <<: *defaults - license: "CC-BY-4.0" -code: - <<: *defaults - license: "LGPL-3.0-only" -supp: - <<: *defaults - license: "CC0-1.0" diff --git a/.vscode/settings.json b/.vscode/settings.json deleted file mode 100644 index 5010f37..0000000 --- a/.vscode/settings.json +++ /dev/null @@ -1,13 +0,0 @@ -{ - "editor.formatOnSave": true, - "editor.defaultFormatter": "ms-python.python", - "gitlab.featureFlags": {"securityScansFlag": false}, - "python.formatting.provider": "black", - "python.formatting.blackArgs": [ - "--line-length", - "79" - ], - "python.linting.mypyCategorySeverity.note": "Hint", - "python.linting.mypyEnabled": true, - -} diff --git a/.vscode/settings.json.license b/.vscode/settings.json.license deleted file mode 100644 index 919c9c1..0000000 --- a/.vscode/settings.json.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH - -SPDX-License-Identifier: CC0-1.0 diff --git a/CHANGELOG.rst b/CHANGELOG.rst deleted file mode 100644 index bc3c45a..0000000 --- a/CHANGELOG.rst +++ /dev/null @@ -1,134 +0,0 @@ -.. SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -.. -.. SPDX-License-Identifier: CC-BY-4.0 - -v1.5.0 -====== -Compatibility and bug fixes, cli improvements and code formatting - -Changed -------- -- migrate to psyplot-plugin-template `!34 `__ -- Update psyplot min version `!38 `__ - -Fixed ------ -- fix updating current projects in console `!35 `__ - -Added ------ -- implement decoder command-line argument `!36 `__ - -v1.4.0 -====== -Compatibility fixes and LGPL license - -As with psyplot 1.4.0, psyplot-gui is now continuously tested and deployed with -CircleCI. - - -Added ------ -- psyplot-gui does now have a CITATION.cff file, see https://citation-file-format.github.io - - -Changed -------- -- psyplot is now officially licensed under LGPL-3.0-only, - see `#29 `__ -- Documentation is now hosted with Github Pages at https://psyplot.github.io/psyplot-gui. - Redirects from the old documentation at `https://psyplot-gui.readthedocs.io` have been - configured. -- We use CicleCI now for a standardized CI/CD pipeline to build and test - the code and docs all at one place, see `#28 `__ - - - -v1.3.0 -====== -Presets and more variable info - -Changed -------- -- psyplot-gui has been moved from https://github.com/Chilipp/psyplot-gui to https://github.com/psyplot/psyplot-gui, - see `#10 `__ -- variables in the dataset tree show now more content, - see `#16 `__ -- setting the rcparam ``help_explorer.use_intersphinx`` to None, will not use - intersphinx on windows, see `#20 `__ - -Added ------ -- The psyplot gui can now load and save preset files, - see `psyplot#24 `__ and - `#17 https://github.com/psyplot/psyplot-gui/pull/17`__ -- Add option to start the GUI without importing QtWebEngineWidgets - `#11 `__ -- Dockmixins (i.e. plugins) can now reimplement the `position_dock` method that - controls where the dock is exactly placed in the GUI - (see `#12 `__) - -v1.2.4 -====== -New release with better OpenGL support (see ``psyplot --help``) - -v1.2.3 -====== -Minor release without major API changes. - -v1.2.2 -====== -From now one, python 2.7 is not supported anymore. - -Added ------ -- Added the possibility to change the central widget of the GUI -- Added `remove_plugin` method for psyplot GUI plugins - -Changed -------- -- removed MacOS app folder in python dist - -v1.2.1 -====== -monkey patch for ipykernel < 5.1.1 to fix -https://github.com/ipython/ipykernel/issues/370 - -v1.2.0 -====== -Changed -------- -- The HTML help explorer now also shows a table of contents in the intro - and in the side bar to navigate to previously visited objects - -v1.1.0 -====== -This release mainly adds the possibility to create plugins into the -psyplot-gui and it adds a new framework to allow the formatoptions to provide -a custom interface to the formatoptions widget. - -Added ------ -- Added layout windows menu and default layout -- Added ``script`` and ``command`` command line arguments -- The ``pwd`` command line arguments now changes the working directory of the - running GUI -- Added callbacks to the ``MainWindow`` class. This framework can be used on a - low level to interact with the current GUI. -- The DataFrameEditor. A widget to display dataframes -- The implementation of the ``psyplot.plotter.Formatoption.get_fmt_widget`` - method. Formatoptions now can add a custom widget to the formatoptions widget - - -v1.0.1 -====== -.. image:: https://zenodo.org/badge/55793611.svg - :target: https://zenodo.org/badge/latestdoi/55793611 - -Added ------ -- added changelog - -Changed -------- -- fixed bug that prevented startup on Windows diff --git a/CITATION.cff b/CITATION.cff deleted file mode 100644 index aa17bfe..0000000 --- a/CITATION.cff +++ /dev/null @@ -1,63 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -# YAML 1.2 ---- -cff-version: "1.2.0" -message: "If you use this software, please cite both the article from preferred-citation and the software itself." -title: "psyplot-gui: Graphical user interface for the psyplot package" -authors: - - family-names: Sommer - given-names: "Philipp S." - affiliation: "Helmholtz-Zentrum Hereon" - orcid: "https://orcid.org/0000-0001-6171-7716" - website: "https://www.philipp-s-sommer.de" - post-code: 21502 - city: Geesthacht - country: DE - email: philipp.sommer@hereon.de -doi: "10.5281/zenodo.845725" -contact: - - email: psyplot@hereon.de - name: "Psyplot developers at hereon" -license: "LGPL-3.0-only" -repository-code: https://github.com/psyplot/psyplot -type: software -keywords: - - psyplot - - python - - visualization - - xarray - - matplotlib - - netcdf4 - - interactive - - climate models - - unstructured - - earth-sciences - - pyqt - - qt - - ipython - - jupyter - - qtconsole - - raster - - cartopy -preferred-citation: - title: "The psyplot interactive visualization framework" - authors: - - family-names: Sommer - given-names: "Philipp S." - affiliation: "Helmholtz-Zentrum Hereon" - orcid: "https://orcid.org/0000-0001-6171-7716" - year: 2017 - type: article - doi: "10.21105/joss.00363" - date-published: 2017-08-22 - journal: Journal of Open Source Software - volume: 2 - number: 16 - pages: 363 - publisher: - name: The Open Journal - license: CC-BY-4.0 -... diff --git a/LICENSES/CC-BY-4.0.txt b/LICENSES/CC-BY-4.0.txt deleted file mode 100644 index 13ca539..0000000 --- a/LICENSES/CC-BY-4.0.txt +++ /dev/null @@ -1,156 +0,0 @@ -Creative Commons Attribution 4.0 International - - Creative Commons Corporation (“Creative Commons”) is not a law firm and does not provide legal services or legal advice. Distribution of Creative Commons public licenses does not create a lawyer-client or other relationship. Creative Commons makes its licenses and related information available on an “as-is” basis. Creative Commons gives no warranties regarding its licenses, any material licensed under their terms and conditions, or any related information. Creative Commons disclaims all liability for damages resulting from their use to the fullest extent possible. - -Using Creative Commons Public Licenses - -Creative Commons public licenses provide a standard set of terms and conditions that creators and other rights holders may use to share original works of authorship and other material subject to copyright and certain other rights specified in the public license below. 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To the extent this Public License may be interpreted as a contract, You are granted the Licensed Rights in consideration of Your acceptance of these terms and conditions, and the Licensor grants You such rights in consideration of benefits the Licensor receives from making the Licensed Material available under these terms and conditions. - -Section 1 – Definitions. - - a. Adapted Material means material subject to Copyright and Similar Rights that is derived from or based upon the Licensed Material and in which the Licensed Material is translated, altered, arranged, transformed, or otherwise modified in a manner requiring permission under the Copyright and Similar Rights held by the Licensor. For purposes of this Public License, where the Licensed Material is a musical work, performance, or sound recording, Adapted Material is always produced where the Licensed Material is synched in timed relation with a moving image. - - b. 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If your program is a subroutine library, you may consider it more useful to permit linking proprietary applications with the library. If this is what you want to do, use the GNU Lesser General Public License instead of this License. But first, please read . diff --git a/MANIFEST.in b/MANIFEST.in deleted file mode 100644 index e456215..0000000 --- a/MANIFEST.in +++ /dev/null @@ -1,14 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -include README.rst -include LICENSES/* -include psyplot_gui/sphinx_supp/_static/* -include psyplot_gui/sphinx_supp/conf.py -include psyplot_gui/sphinx_supp/psyplot.rst -include psyplot_gui/icons/*.png -include psyplot_gui/icons/*.png.license -include psyplot_gui/icons/*.svg -include psyplot_gui/icons/*.svg.license -include psyplot_gui/_version.py diff --git a/Makefile b/Makefile deleted file mode 100644 index ebecc99..0000000 --- a/Makefile +++ /dev/null @@ -1,124 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -.PHONY: clean clean-build clean-pyc clean-test coverage dist docs help install lint lint/flake8 lint/black -.DEFAULT_GOAL := help - -define BROWSER_PYSCRIPT -import os, webbrowser, sys - -from urllib.request import pathname2url - -webbrowser.open("file://" + pathname2url(os.path.abspath(sys.argv[1]))) -endef -export BROWSER_PYSCRIPT - -define PRINT_HELP_PYSCRIPT -import re, sys - -for line in sys.stdin: - match = re.match(r'^([a-zA-Z_-]+):.*?## (.*)$$', line) - if match: - target, help = match.groups() - print("%-20s %s" % (target, help)) -endef -export PRINT_HELP_PYSCRIPT - -BROWSER := python -c "$$BROWSER_PYSCRIPT" - -help: - @python -c "$$PRINT_HELP_PYSCRIPT" < $(MAKEFILE_LIST) - -clean: clean-build clean-pyc clean-test clean-venv ## remove all build, virtual environments, test, coverage and Python artifacts - -clean-build: ## remove build artifacts - rm -fr build/ - rm -fr dist/ - rm -fr .eggs/ - find . -name '*.egg-info' -exec rm -fr {} + - find . -name '*.egg' -exec rm -f {} + - -clean-pyc: ## remove Python file artifacts - find . -name '*.pyc' -exec rm -f {} + - find . -name '*.pyo' -exec rm -f {} + - find . -name '*~' -exec rm -f {} + - find . -name '__pycache__' -exec rm -fr {} + - -clean-test: ## remove test and coverage artifacts - rm -fr .tox/ - rm -f .coverage - rm -fr htmlcov/ - rm -fr .pytest_cache - -clean-venv: # remove the virtual environment - rm -rf venv - -lint/isort: ## check style with flake8 - isort --check psyplot_gui tests -lint/flake8: ## check style with flake8 - flake8 psyplot_gui tests -lint/black: ## check style with black - black --check psyplot_gui tests -lint/reuse: ## check licenses - reuse lint - -lint: lint/isort lint/black lint/flake8 lint/reuse ## check style - -formatting: - isort psyplot_gui tests - black psyplot_gui tests - blackdoc psyplot_gui tests - -quick-test: ## run tests quickly with the default Python - python -m pytest - -pipenv-test: ## run tox - pipenv run isort --check psyplot_gui - pipenv run black --line-length 79 --check psyplot_gui - pipenv run flake8 psyplot_gui - pipenv run pytest -v --cov=psyplot_gui -x - pipenv run reuse lint - pipenv run cffconvert --validate - -test: ## run tox - tox - -test-all: test test-docs ## run tests and test the docs - -coverage: ## check code coverage quickly with the default Python - python -m pytest --cov psyplot_gui --cov-report=html - $(BROWSER) htmlcov/index.html - -docs: ## generate Sphinx HTML documentation, including API docs - $(MAKE) -C docs clean - $(MAKE) -C docs html - $(BROWSER) docs/_build/html/index.html - -test-docs: ## generate Sphinx HTML documentation, including API docs - $(MAKE) -C docs clean - $(MAKE) -C docs linkcheck - -servedocs: docs ## compile the docs watching for changes - watchmedo shell-command -p '*.rst' -c '$(MAKE) -C docs html' -R -D . - -release: dist ## package and upload a release - twine upload dist/* - -dist: clean ## builds source and wheel package - python -m build - ls -l dist - -install: clean ## install the package to the active Python's site-packages - python -m pip install . - -dev-install: clean - python -m pip install -r docs/requirements.txt - python -m pip install -e .[dev] - pre-commit install - -venv-install: clean - python -m venv venv - venv/bin/python -m pip install -r docs/requirements.txt - venv/bin/python -m pip install -e .[dev] - venv/bin/pre-commit install diff --git a/README.rst b/README.rst deleted file mode 100644 index 3d9fdc7..0000000 --- a/README.rst +++ /dev/null @@ -1,78 +0,0 @@ -.. SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -.. -.. SPDX-License-Identifier: CC-BY-4.0 - -Graphical User Interface for the psyplot package -================================================ - -.. start-badges - -|CI| -|Code coverage| -|Latest Release| -|PyPI version| -|Code style: black| -|Imports: isort| -|PEP8| -|REUSE status| - - -.. end-badges - -Welcome! This package enhances the interactive visualization framework -psyplot_ with a graphical user interface using PyQt_. See the homepage of the -main project on examples on the possibilities with psyplot_. - -You can see the full documentation under -`psyplot.github.io/psyplot-gui/ `__ - -.. _PyQt: https://riverbankcomputing.com/software/pyqt/intro -.. _psyplot: http://psyplot.github.io/ - - -Copyright ---------- -Copyright © 2024 Helmholtz-Zentrum Hereon, 2020-2021 Helmholtz-Zentrum -Geesthacht, 2016-2024 University of Lausanne - -Code files in this repository are licensed under the -LGPL-3.0-only, if not stated otherwise in the file. - -Documentation files in this repository are licensed under CC-BY-4.0, if not -stated otherwise in the file. - -Supplementary and configuration files in this repository are licensed -under CC0-1.0, if not stated otherwise -in the file. - -Please check the header of the individual files for more detailed -information. - -This program is free software: you can redistribute it and/or modify -it under the terms of the GNU Lesser General Public License version 3.0 as -published by the Free Software Foundation. - -This program is distributed in the hope that it will be useful, -but WITHOUT ANY WARRANTY; without even the implied warranty of -MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -GNU LGPL-3.0 license for more details. - -You should have received a copy of the GNU LGPL-3.0 license -along with this program. If not, see https://www.gnu.org/licenses/. - -.. |CI| image:: https://codebase.helmholtz.cloud/psyplot/psyplot-gui/badges/master/pipeline.svg - :target: https://codebase.helmholtz.cloud/psyplot/psyplot-gui/-/pipelines?page=1&scope=all&ref=master -.. |Code coverage| image:: https://codebase.helmholtz.cloud/psyplot/psyplot-gui/badges/master/coverage.svg - :target: https://codebase.helmholtz.cloud/psyplot/psyplot-gui/-/graphs/master/charts -.. |Latest Release| image:: https://codebase.helmholtz.cloud/psyplot/psyplot-gui/-/badges/release.svg - :target: https://codebase.helmholtz.cloud/psyplot/psyplot-gui -.. |PyPI version| image:: https://img.shields.io/pypi/v/psyplot-gui.svg - :target: https://pypi.python.org/pypi/psyplot-gui/ -.. |Code style: black| image:: https://img.shields.io/badge/code%20style-black-000000.svg - :target: https://github.com/psf/black -.. |Imports: isort| image:: https://img.shields.io/badge/%20imports-isort-%231674b1?style=flat&labelColor=ef8336 - :target: https://pycqa.github.io/isort/ -.. |PEP8| image:: https://img.shields.io/badge/code%20style-pep8-orange.svg - :target: https://www.python.org/dev/peps/pep-0008/ -.. |REUSE status| image:: https://api.reuse.software/badge/codebase.helmholtz.cloud/psyplot/psyplot-gui - :target: https://api.reuse.software/info/codebase.helmholtz.cloud/psyplot/psyplot-gui diff --git a/docs/explained_screenshot.png b/_images/explained_screenshot.png similarity index 100% rename from docs/explained_screenshot.png rename to _images/explained_screenshot.png diff --git a/docs/ipython_console.png b/_images/ipython_console.png similarity index 100% rename from docs/ipython_console.png rename to _images/ipython_console.png diff --git a/docs/world.png b/_images/world.png similarity index 100% rename from docs/world.png rename to _images/world.png diff --git a/_modules/index.html b/_modules/index.html new file mode 100644 index 0000000..2b5671e --- /dev/null +++ b/_modules/index.html @@ -0,0 +1,310 @@ + + + + + + Overview: module code — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
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Source code for psyplot_gui

+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+"""psyplot-gui
+
+Graphical user interface for the psyplot package
+"""
+
+from __future__ import annotations
+
+import argparse
+import atexit
+import datetime as dt
+import logging
+import os
+import os.path as osp
+import pickle
+import socket
+import sys
+import tempfile
+import time
+from itertools import chain
+
+import fasteners
+import psyplot
+import six
+import xarray as xr
+import yaml
+from psyplot.__main__ import make_plot
+from psyplot.config.rcsetup import get_configdir, safe_list
+from psyplot.docstring import docstrings
+from psyplot.utils import get_default_value
+from psyplot.warning import warn
+
+import psyplot_gui.config as config
+from psyplot_gui.config.rcsetup import rcParams
+
+from . import _version
+
+__version__ = _version.get_versions()["version"]
+
+__author__ = "Philipp S. Sommer"
+__copyright__ = "2021-2024 Helmholtz-Zentrum hereon GmbH"
+__credits__ = [
+    "Philipp S. Sommer",
+]
+__license__ = "LGPL-3.0-only"
+
+__maintainer__ = "Philipp S. Sommer"
+__email__ = "philipp.sommer@hereon.de"
+
+__status__ = "Production"
+
+logger = logging.getLogger(__name__)
+logger.debug(
+    "%s: Initializing psyplot gui, version %s",
+    dt.datetime.now().isoformat(),
+    __version__,
+)
+logger.debug("psyplot version: %s", psyplot.__version__)
+logger.debug("Logging configuration file: %s", config.logcfg_path)
+logger.debug("Configuration file: %s", config.config_path)
+
+
+rcParams.HEADER += "\n\npsyplot gui version: " + __version__
+
+
+logger = logging.getLogger(__name__)
+
+
+

+[docs]
+def get_versions(requirements=True):
+    ret = {"version": __version__}
+    if requirements:
+        req = ret["requirements"] = {}
+        try:
+            import qtconsole
+        except Exception:
+            logger.error("Could not load qtconsole!", exc_info=True)
+        else:
+            req["qtconsole"] = qtconsole.__version__
+        try:
+            from psyplot_gui.compat.qtcompat import PYQT_VERSION, QT_VERSION
+        except Exception:
+            logger.error("Could not load qt and pyqt!", exc_info=True)
+        else:
+            req["qt"] = QT_VERSION
+            req["pyqt"] = PYQT_VERSION
+    return ret

+
+
+
+

+[docs]
+@docstrings.get_sections(base="psyplot_gui.start_app")
+@docstrings.dedent
+def start_app(
+    fnames=[],
+    name=[],
+    dims=None,
+    plot_method=None,
+    output=None,
+    project=None,
+    engine=None,
+    formatoptions=None,
+    tight=False,
+    encoding=None,
+    enable_post=False,
+    seaborn_style=None,
+    output_project=None,
+    concat_dim=get_default_value(xr.open_mfdataset, "concat_dim"),
+    chname={},
+    backend=False,
+    new_instance=False,
+    rc_file=None,
+    rc_gui_file=None,
+    include_plugins=rcParams["plugins.include"],
+    exclude_plugins=rcParams["plugins.exclude"],
+    offline=False,
+    pwd=None,
+    script=None,
+    command=None,
+    exec_=True,
+    use_all=False,
+    callback=None,
+    preset=None,
+    opengl_implementation=None,
+    webengineview=True,
+    decoder=None,
+):
+    """
+    Eventually start the QApplication or only make a plot
+
+    Parameters
+    ----------
+    %(make_plot.parameters)s
+    backend: None or str
+        The backend to use. By default, the ``'gui.backend'`` key in the
+        :attr:`~psyplot_gui.config.rcsetup.rcParams` dictionary is used.
+        Otherwise it can be None to use the standard matplotlib backend or a
+        string identifying the backend
+    new_instance: bool
+        If True/set and the `output` parameter is not set, a new application is
+        created
+    rc_gui_file: str
+        The path to a yaml configuration file that can be used to update  the
+        :attr:`~psyplot_gui.config.rcsetup.rcParams`
+    include_plugins: list of str
+        The plugin widget to include. Can be either None to load all that are
+        not explicitly excluded by `exclude_plugins` or a list of
+        plugins to include. List items can be either module names, plugin
+        names or the module name and widget via ``'<module_name>:<widget>'``
+    exclude_plugins: list of str
+        The plugin widgets to exclude. Can be either ``'all'`` to exclude
+        all plugins or a list like in `include_plugins`.
+    offline: bool
+        If True/set, psyplot will be started in offline mode without
+        intersphinx and remote access for the help explorer
+    pwd: str
+        The path to the working directory to use. Note if you do not provide
+        any `fnames` or `project`, but set the `pwd`, it will switch the
+        `pwd` of the current GUI.
+    script: str
+        The path to a python script that shall be run in the GUI. If the GUI
+        is already running, the commands will be executed in this GUI.
+    command: str
+        Python commands that shall be run in the GUI. If the GUI is already
+        running, the commands will be executed in this GUI
+    use_all: bool
+        If True, use all variables. Note that this is the default if the
+        `output` is specified and not `name`
+    exec_: bool
+        If True, the main loop is entered.
+    callback: str
+        A unique identifier for the method that should be used if psyplot is
+        already running. Set this parameter to None to avoid sending
+    opengl_implementation: {'software', 'desktop', 'gles', 'automatic'}
+        OpenGL implementation to pass to Qt. Possible options are
+        'software', 'desktop', 'gles' and 'automatic' (which let's PyQt
+        decide).
+    webengineview: bool
+        If True (default), use an HTML help widget. This might not be available
+        for all builds of PyQt5 under all circumstances. If not set, the
+        rcParams key ``'help_explorer.use_webengineview'`` is used.
+
+    Returns
+    -------
+    None or :class:`psyplot_gui.main.MainWindow`
+        ``None`` if `exec_` is True, otherwise the created
+        :class:`~psyplot_gui.main.MainWindow` instance
+    """
+    if pwd is not None:
+        os.chdir(pwd)
+    if script is not None:
+        script = osp.abspath(script)
+
+    if project is not None and (name != [] or dims is not None):
+        warn(
+            "The `name` and `dims` parameter are ignored if the `project`"
+            " parameter is set!"
+        )
+
+    # load rcParams from file
+    if rc_gui_file is not None:
+        rcParams.load_from_file(rc_gui_file)
+
+    # set plugins
+    rcParams["plugins.include"] = include_plugins
+    rcParams["plugins.exclude"] = exclude_plugins
+    if webengineview is not None:
+        rcParams["help_explorer.use_webengineview"] = webengineview
+
+    if offline:
+        rcParams["help_explorer.online"] = False
+        rcParams["help_explorer.use_intersphinx"] = False
+
+    if dims is not None and not isinstance(dims, dict):
+        dims = dict(chain(*map(six.iteritems, dims)))
+
+    if output is not None:
+        return make_plot(
+            fnames=fnames,
+            name=name,
+            dims=dims,
+            plot_method=plot_method,
+            output=output,
+            project=project,
+            engine=engine,
+            formatoptions=formatoptions,
+            tight=tight,
+            rc_file=rc_file,
+            encoding=encoding,
+            enable_post=enable_post,
+            seaborn_style=seaborn_style,
+            output_project=output_project,
+            concat_dim=concat_dim,
+            chname=chname,
+            preset=preset,
+            decoder=decoder,
+        )
+    if use_all:
+        name = "all"
+    else:
+        name = safe_list(name)
+
+    if formatoptions is not None:
+        if not isinstance(formatoptions, dict):
+            # list of dicts
+            for fmt in formatoptions[1:]:
+                formatoptions[0].update(fmt)
+            formatoptions = formatoptions[0]
+        if preset is not None:
+            import psyplot.project as psy
+
+            preset_data = psy.Project._load_preset(preset)
+        else:
+            preset_data = {}
+        preset_data.update(formatoptions)
+        preset = tempfile.NamedTemporaryFile(prefix="psy_", suffix=".yml").name
+        with open(preset, "w") as f:
+            yaml.dump(preset_data, f)
+
+    # make preset path absolute
+    if (
+        preset is not None
+        and not isinstance(preset, dict)
+        and osp.exists(preset)
+    ):
+        preset = osp.abspath(preset)
+
+    # Lock file creation
+    if not new_instance:
+        lock_file = osp.join(get_configdir(), "psyplot.lock")
+        lock = fasteners.InterProcessLock(lock_file)
+
+        # Try to lock psyplot.lock. If it's *possible* to do it, then
+        # there is no previous instance running and we can start a
+        # new one. If *not*, then there is an instance already
+        # running, which is locking that file
+        lock_created = lock.acquire(False)
+    else:
+        lock_created = False
+
+    chname = dict(chname)
+
+    if lock_created:
+        # Start a new instance
+        atexit.register(lock.release)
+    elif not new_instance:
+        if callback is None:
+            if fnames or project:
+                callback = "new_plot"
+            elif pwd is not None:
+                callback = "change_cwd"
+                fnames = [pwd]
+            elif script is not None:
+                callback = "run_script"
+                fnames = [script]
+            elif command is not None:
+                callback = "command"
+                engine = command
+        if callback:
+            send_files_to_psyplot(
+                callback,
+                fnames,
+                project,
+                engine,
+                plot_method,
+                name,
+                dims,
+                encoding,
+                enable_post,
+                seaborn_style,
+                concat_dim,
+                chname,
+                preset,
+                decoder,
+            )
+        return
+    elif new_instance:
+        rcParams["main.listen_to_port"] = False
+    if backend is not False:
+        rcParams["backend"] = backend
+    from psyplot_gui.main import MainWindow
+
+    fnames = _get_abs_names(fnames)
+    if project is not None:
+        project = _get_abs_names([project])[0]
+    if exec_:
+        from psyplot_gui.compat.qtcompat import QApplication
+
+        app = QApplication(sys.argv)
+
+    _set_opengl_implementation(opengl_implementation)
+
+    if isinstance(new_instance, MainWindow):
+        mainwindow = new_instance
+    else:
+        mainwindow = MainWindow.run(
+            fnames,
+            project,
+            engine,
+            plot_method,
+            name,
+            dims,
+            encoding,
+            enable_post,
+            seaborn_style,
+            concat_dim,
+            chname,
+            preset,
+            decoder,
+        )
+    if script is not None:
+        mainwindow.console.run_script_in_shell(script)
+    if command is not None:
+        mainwindow.console.run_command_in_shell(command)
+    if exec_:
+        sys.excepthook = mainwindow.excepthook
+        sys.exit(app.exec_())
+    else:
+        return mainwindow

+
+
+
+

+[docs]
+def send_files_to_psyplot(callback, fnames, project, *args):
+    """
+    Simple socket client used to send the args passed to the psyplot
+    executable to an already running instance.
+
+    This function has to most parts been taken from spyder
+    """
+    port = rcParams["main.open_files_port"]
+
+    # Wait ~50 secs for the server to be up
+    # Taken from http://stackoverflow.com/a/4766598/438386
+    for _x in range(200):
+        fnames = _get_abs_names(fnames)
+        if project is not None:
+            project = _get_abs_names([project])[0]
+        try:
+            client = socket.socket(
+                socket.AF_INET, socket.SOCK_STREAM, socket.IPPROTO_TCP
+            )
+            client.connect(("127.0.0.1", port))
+            client.send(pickle.dumps([callback, fnames, project] + list(args)))
+            client.close()
+        except socket.error:
+            time.sleep(0.25)
+            continue
+        break

+
+
+
+def _get_abs_names(fnames):
+    """Return the absolute paths of the given filenames"""
+    if fnames is None:
+        return
+    for i, fname in enumerate(fnames):
+        if fname:
+            fnames[i] = ",".join(map(osp.abspath, fname.split(",")))
+    return fnames
+
+
+

+[docs]
+def get_parser(create=True):
+    """Return a parser to make that can be used to make plots or open files
+    from the command line
+
+    Returns
+    -------
+    psyplot.parser.FuncArgParser
+        The :class:`argparse.ArgumentParser` instance
+
+    See Also
+    --------
+    psyplot.main.get_parser
+    psyplot.parser.FuncArgParser
+    psyplot.main.main"""
+    from psyplot.__main__ import get_parser
+
+    parser = get_parser(create=False)
+
+    parser.setup_args(start_app)
+
+    gui_grp = parser.add_argument_group(
+        "Gui options", "Options specific to the graphical user interface"
+    )
+
+    parser.update_arg(
+        "backend",
+        short="b",
+        const=None,
+        nargs="?",
+        metavar="backend",
+        help="""
+        The backend to use. By default, the ``'gui.backend'`` key in the
+        :attr:`~psyplot_gui.config.rcsetup.rcParams` dictionary is used. If
+        used without options, the default matplotlib backend is used.""",
+        group=gui_grp,
+    )
+
+    parser.update_arg("new_instance", short="ni", group=gui_grp)
+
+    parser.update_arg("rc_gui_file", short="rc-gui", group=gui_grp)
+    parser.pop_key("rc_gui_file", "metavar")
+    parser.update_arg(
+        "include_plugins",
+        short="inc",
+        group=gui_grp,
+        default=rcParams["plugins.include"],
+    )
+    parser.append2help("include_plugins", ". Default: %(default)s")
+    parser.update_arg(
+        "exclude_plugins",
+        short="exc",
+        group=gui_grp,
+        default=rcParams["plugins.exclude"],
+    )
+    parser.append2help("exclude_plugins", ". Default: %(default)s")
+
+    parser.update_arg("offline", group=gui_grp)
+    parser.update_arg("pwd", group=gui_grp)
+    parser.update_arg("script", short="s", group=gui_grp)
+    parser.update_arg("command", short="c", group=gui_grp)
+
+    parser.update_arg(
+        "opengl_implementation",
+        group=gui_grp,
+        short="opengl",
+        choices=["software", "desktop", "gles", "automatic"],
+    )
+
+    # add an action to display the GUI plugins
+    info_grp = parser.unfinished_arguments["list_plugins"].get("group")
+    parser.update_arg(
+        "list_gui_plugins",
+        short="lgp",
+        long="list-gui-plugins",
+        action=ListGuiPluginsAction,
+        if_existent=False,
+        help=(
+            "Print the names of the GUI plugins and exit. Note that the "
+            "displayed plugins are not affected by the `include-plugins` "
+            "and `exclude-plugins` options"
+        ),
+    )
+    if info_grp is not None:
+        parser.unfinished_arguments["list_gui_plugins"]["group"] = info_grp
+
+    parser.pop_key("offline", "short")
+
+    parser.append2help(
+        "output_project",
+        ". This option has only an effect if the `output` " " option is set.",
+    )
+
+    parser.update_arg("use_all", short="a")
+
+    parser.pop_arg("exec_")
+    parser.pop_arg("callback")
+
+    parser.pop_key("webengineview", "short")
+    parser.update_arg(
+        "webengineview", default=None, action="store_true", group=gui_grp
+    )
+
+    parser.unfinished_arguments["no-webengineview"] = dict(
+        long="no-webengineview",
+        default=None,
+        action="store_false",
+        dest="webengineview",
+        help="Do not use HTML rendering.",
+        group=gui_grp,
+    )
+
+    if psyplot.__version__ < "1.0":
+        parser.set_main(start_app)
+
+    parser.epilog += """
+
+If you omit the ``'-o'`` option, the file is opened in the graphical user
+interface and if you run::
+
+    $ psyplot -pwd .
+
+It will switch the directory of the already running GUI (if existent) to the
+current working directory in your terminal. Additionally,::
+
+    $ psyplot -s myscript.py
+
+will run the file ``'myscript.py'`` in the GUI and::
+
+    $ psyplot -c 'print("Hello World!")'
+
+will execute ``print("Hello World")`` in the GUI. The output, of the `-s` and
+`-c` options, will, however, be shown in the terminal."""
+
+    if create:
+        parser.create_arguments()
+
+    return parser

+
+
+
+#: A boolean variable to check if the GUI is tested. This is set automatically
+#: true on CI services
+UNIT_TESTING = os.getenv("CI")
+
+
+

+[docs]
+class ListGuiPluginsAction(argparse.Action):
+    def __init__(
+        self,
+        option_strings,
+        dest=argparse.SUPPRESS,
+        nargs=None,
+        default=argparse.SUPPRESS,
+        **kwargs,
+    ):
+        if nargs is not None:
+            raise ValueError("nargs not allowed")
+        kwargs["default"] = default
+        super(ListGuiPluginsAction, self).__init__(
+            option_strings, nargs=0, dest=dest, **kwargs
+        )
+
+    def __call__(self, parser, namespace, values, option_string=None):
+        import yaml
+
+        if not rcParams._plugins:
+            list(rcParams._load_plugin_entrypoints())
+        print(yaml.dump(rcParams._plugins, default_flow_style=False))
+        sys.exit(0)

+
+
+
+def _set_opengl_implementation(option):
+    """
+    Set the OpenGL implementation
+
+    This function has been taken from spyder
+    (see https://github.com/spyder-ide/spyder/pull/7859)
+
+    See issue https://github.com/spyder-ide/spyder/issues/7447 for the details.
+    """
+    try:
+        from PyQt5.QtQuick import QQuickWindow, QSGRendererInterface
+    except Exception:
+        QQuickWindow = QSGRendererInterface = None
+    from PyQt5.QtCore import QCoreApplication, Qt
+
+    if option is None:
+        option = rcParams["main.opengl"]
+    if option == "software":
+        QCoreApplication.setAttribute(Qt.AA_UseSoftwareOpenGL)
+        if QQuickWindow is not None:
+            QQuickWindow.setSceneGraphBackend(QSGRendererInterface.Software)
+    elif option == "desktop":
+        QCoreApplication.setAttribute(Qt.AA_UseDesktopOpenGL)
+        if QQuickWindow is not None:
+            QQuickWindow.setSceneGraphBackend(QSGRendererInterface.OpenGL)
+    elif option == "gles":
+        QCoreApplication.setAttribute(Qt.AA_UseOpenGLES)
+        if QQuickWindow is not None:
+            QQuickWindow.setSceneGraphBackend(QSGRendererInterface.OpenGL)
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/backend.html b/_modules/psyplot_gui/backend.html new file mode 100644 index 0000000..4289bad --- /dev/null +++ b/_modules/psyplot_gui/backend.html @@ -0,0 +1,487 @@ + + + + + + psyplot_gui.backend — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.backend

+"""Matplotlib backend to include matplotlib figures as dockwidgets in the
+psyplot gui
+
+This backend is based upon matplotlibs qt4agg and qt5agg backends."""
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+from matplotlib.backend_bases import FigureManagerBase
+from matplotlib.figure import Figure
+
+from psyplot_gui.common import DockMixin
+from psyplot_gui.compat.qtcompat import (
+    QDockWidget,
+    Qt,
+    QVBoxLayout,
+    QWidget,
+    with_qt5,
+)
+
+if with_qt5:
+    from matplotlib.backends.backend_qt5agg import (
+        FigureCanvasQTAgg,
+        FigureManagerQT,
+    )
+else:
+    from matplotlib.backends.backend_qt4agg import (
+        FigureCanvasQTAgg,
+        FigureManagerQT,
+    )
+
+
+

+[docs]
+class FiguresDock(QDockWidget):
+    """Reimplemented QDockWidget to remove the dock widget when closed"""
+
+

+[docs]
+    def close(self, *args, **kwargs):
+        """
+        Reimplemented to remove the dock widget from the mainwindow when closed
+        """
+        from psyplot_gui.main import mainwindow
+
+        try:
+            mainwindow.figures.remove(self)
+        except Exception:
+            pass
+        try:
+            mainwindow.removeDockWidget(self)
+        except Exception:
+            pass
+        return super(FiguresDock, self).close(*args, **kwargs)

+

+
+
+
+

+[docs]
+class FigureWidget(DockMixin, QWidget):
+    """A simple container for figures in the psyplot backend"""
+
+    dock_cls = FiguresDock

+
+
+
+

+[docs]
+def new_figure_manager(num, *args, **kwargs):
+    """
+    Create a new figure manager instance
+    """
+    FigureClass = kwargs.pop("FigureClass", Figure)
+    thisFig = FigureClass(*args, **kwargs)
+    return new_figure_manager_given_figure(num, thisFig)

+
+
+
+

+[docs]
+def new_figure_manager_given_figure(num, figure):
+    """
+    Create a new figure manager instance for the given figure.
+    """
+    canvas = PsyplotCanvas(figure)
+    return PsyplotCanvasManager(canvas, num)

+
+
+
+

+[docs]
+class PsyplotCanvasManager(FigureManagerQT):
+    """The canvas manager for the psyplot backend interacting with the
+    mainwindow of the psyplot gui"""
+
+    toolbar = None
+
+    def __init__(self, canvas, num):
+        from psyplot_gui.main import mainwindow
+
+        self.main = mainwindow
+        if mainwindow is None:
+            return super(PsyplotCanvasManager, self).__init__(canvas, num)
+        parent_widget = FigureWidget()
+        parent_widget.vbox = vbox = QVBoxLayout()
+        self.window = dock = parent_widget.to_dock(
+            mainwindow,
+            title="Figure %d" % num,
+            position=Qt.TopDockWidgetArea,
+            docktype=None,
+        )
+        if mainwindow.figures:
+            mainwindow.tabifyDockWidget(mainwindow.figures[-1], dock)
+        mainwindow.figures.append(dock)
+        FigureManagerBase.__init__(self, canvas, num)
+        self.canvas = canvas
+
+        self.window.setWindowTitle("Figure %d" % num)
+
+        if hasattr(self, "_get_toolbar"):
+            # legacy solution for matplotlib < 3.6
+            self.toolbar = self._get_toolbar(canvas, parent_widget)
+
+        # add text label to status bar
+        self.statusbar_label = mainwindow.figures_label
+
+        if self.toolbar is not None:
+            vbox.addWidget(self.toolbar)
+            self.toolbar.message.connect(self.statusbar_label.setText)
+
+        vbox.addWidget(canvas)
+        parent_widget.setLayout(vbox)
+        self.parent_widget = parent_widget
+
+        # Give the keyboard focus to the figure instead of the
+        # manager; StrongFocus accepts both tab and click to focus and
+        # will enable the canvas to process event w/o clicking.
+        # ClickFocus only takes the focus is the window has been
+        # clicked
+        # on. http://qt-project.org/doc/qt-4.8/qt.html#FocusPolicy-enum or
+        # http://doc.qt.digia.com/qt/qt.html#FocusPolicy-enum
+        self.canvas.setFocusPolicy(Qt.StrongFocus)
+        self.canvas.setFocus()
+        self.window._destroying = False
+
+        self.main.show()
+
+        def notify_axes_change(fig):
+            # This will be called whenever the current axes is changed
+            if self.toolbar is not None:
+                self.toolbar.update()
+
+        self.canvas.figure.add_axobserver(notify_axes_change)
+
+

+[docs]
+    def statusBar(self, *args, **kwargs):
+        if self.main is None:
+            return super(PsyplotCanvasManager, self).statusBar(*args, **kwargs)
+        return self.main.statusBar(*args, **kwargs)

+
+
+

+[docs]
+    def resize(self, width, height):
+        self.window.resize(width, height + self.toolbar.sizeHint().height())

+

+
+
+
+

+[docs]
+class PsyplotCanvas(FigureCanvasQTAgg):
+    """The canvas class with reimplemented resizing"""
+
+

+[docs]
+    def resizeEvent(self, event):
+        """Reimplemented to make sure that the figure is only resized for
+        events with height and width greater 0"""
+        if event.size().width() > 0 and event.size().height() > 0:
+            super(PsyplotCanvas, self).resizeEvent(event)

+

+
+
+
+FigureManager = PsyplotCanvasManager
+FigureCanvas = PsyplotCanvas
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/common.html b/_modules/psyplot_gui/common.html new file mode 100644 index 0000000..757d4b9 --- /dev/null +++ b/_modules/psyplot_gui/common.html @@ -0,0 +1,726 @@ + + + + + + psyplot_gui.common — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.common

+"""Common functions used for the psyplot gui"""
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+import inspect
+import logging
+import os.path as osp
+import sys
+import traceback as tb
+from functools import partial
+
+import six
+
+from psyplot_gui.compat.qtcompat import (
+    QAction,
+    QDesktopWidget,
+    QDockWidget,
+    QErrorMessage,
+    QIcon,
+    QInputDialog,
+    QRegExpValidator,
+    QtCore,
+    QToolButton,
+)
+
+if six.PY2:
+    try:
+        import CStringIO as io
+    except ImportError:
+        import StringIO as io
+else:
+    import io
+
+
+

+[docs]
+def is_running_tests():
+    """Check if there are any GUI tests running
+
+    This function returns the :attr:`psyplot_gui.UNIT_TESTING` variable"""
+    import psyplot_gui
+
+    return psyplot_gui.UNIT_TESTING

+
+
+
+

+[docs]
+def get_module_path(modname):
+    """Return module `modname` base path"""
+
+    return osp.abspath(osp.dirname(sys.modules[modname].__file__))

+
+
+
+

+[docs]
+def get_icon(name):
+    """Get the path to an icon in the icons directory"""
+    return osp.join(get_module_path("psyplot_gui"), "icons", name)

+
+
+
+

+[docs]
+class DockMixin(object):
+    """A mixin class to define psyplot_gui plugins
+
+    Notes
+    -----
+    Each external plugin should set the :attr:`dock_position` and the
+    :attr:`title` attribute!
+    """
+
+    _set_central_action = _view_action = None
+
+    #: The position of the plugin
+    dock_position = None
+
+    #: The title of the plugin
+    title = None
+
+    #: The class to use for the DockWidget
+    dock_cls = QDockWidget
+
+    #: The config page for this widget. Should inherit the
+    #: :class:`psyplot_gui.preferences.ConfigPage` widget
+    config_page = None
+
+    #: Boolean that is True if the dock widget should be hidden automatically
+    #: after startup
+    hidden = False
+
+    #: The instance of :class:`QDockWidget` of this plugin
+    dock = None
+
+    @property
+    def is_shown(self):
+        """Boolean that is True, if the dock widget is shown"""
+        return (
+            self.dock is not None and self.dock.toggleViewAction().isChecked()
+        )
+
+

+[docs]
+    def to_dock(
+        self, main, title=None, position=None, docktype="pane", *args, **kwargs
+    ):
+        if title is None:
+            title = self.title
+        if title is None:
+            raise ValueError("No title specified for the %s widget" % (self))
+        if position is None:
+            position = self.dock_position
+        if position is None:
+            raise ValueError(
+                "No position specified for the %s widget (%s)" % (title, self)
+            )
+        self.title = title
+        self.dock_position = position
+        if self.dock is None:
+            self.dock = self.dock_cls(title, main)
+            self.dock.setWidget(self)
+            main.dockwidgets.append(self.dock)
+            self.create_central_widget_action(main)
+            self.create_view_action(main, docktype)
+        self.position_dock(main, *args, **kwargs)
+        config_page = self.config_page
+        if config_page is not None:
+            main.config_pages.append(config_page)
+        return self.dock

+
+
+

+[docs]
+    def position_dock(self, main, *args, **kwargs):
+        """Set the position of the dock widget
+
+        This method places the plugin widget at the desired dock position
+        (by default, indicated with the :attr:`dock_position` attribute)
+
+        Parameters
+        ----------
+        main: psyplot_gui.main.Mainwindow
+            The main window where the dock is added"""
+        main.addDockWidget(self.dock_position, self.dock, *args, **kwargs)

+
+
+

+[docs]
+    def show_plugin(self):
+        """Show the plugin widget"""
+        a = self.dock.toggleViewAction()
+        if not a.isChecked():
+            a.trigger()

+
+
+

+[docs]
+    def hide_plugin(self):
+        """Hide the plugin widget"""
+        a = self.dock.toggleViewAction()
+        if a.isChecked():
+            a.trigger()

+
+
+

+[docs]
+    def show_status_message(self, msg):
+        """Show a status message"""
+        try:
+            self.dock.parent().plugin_label.setText(msg)
+        except AttributeError:
+            pass

+
+
+

+[docs]
+    def create_central_widget_action(self, main):
+        """Setup the action to make this plugin the central widget"""
+        if self._set_central_action is None:
+            menu = main.central_widgets_menu
+            group = main.central_widgets_actions
+            self._set_central_action = action = QAction(self.title, main)
+            action.setCheckable(True)
+            action.triggered.connect(partial(main.set_central_widget, self))
+            menu.addAction(action)
+            group.addAction(action)
+        return self._set_central_action

+
+
+

+[docs]
+    def create_view_action(self, main, docktype="pane"):
+        if self._view_action is None:
+            self._view_action = action = self.dock.toggleViewAction()
+            if docktype == "pane":
+                main.panes_menu.addAction(action)
+            elif docktype == "df":
+                main.dataframe_menu.addAction(action)
+        return self._view_action

+
+
+

+[docs]
+    def remove_plugin(self):
+        """Remove this plugin and close it"""
+        mainwindow = self.dock.parent() if self.dock else self.parent()
+        key = next(
+            (key for key, w in mainwindow.plugins.items() if w is self), None
+        )
+        if mainwindow.centralWidget() is self:
+            mainwindow.set_central_widget(
+                mainwindow.__class__.central_widget_key
+            )
+        if self._view_action is not None:
+            mainwindow.panes_menu.removeAction(self._view_action)
+            mainwindow.dataframe_menu.removeAction(self._view_action)
+        if self._set_central_action is not None:
+            mainwindow.central_widgets_menu.removeAction(
+                self._set_central_action
+            )
+        if key is not None:
+            del mainwindow.plugins[key]
+        if self.dock is not None:
+            mainwindow.removeDockWidget(self.dock)
+            self.dock.close()
+        self.close()

+

+
+
+
+

+[docs]
+class LoadFromConsoleButton(QToolButton):
+    """A toolbutton to load an object from the console"""
+
+    #: The signal that is emitted when an object has been loaded. The first
+    #: argument is the object name, the second the object itself
+    object_loaded = QtCore.pyqtSignal(str, object)
+
+    @property
+    def instances2check_str(self):
+        return ", ".join(
+            "%s.%s" % (cls.__module__, cls.__name__)
+            for cls in self._instances2check
+        )
+
+    @property
+    def potential_object_names(self):
+        from ipykernel.inprocess.ipkernel import InProcessInteractiveShell
+
+        shell = InProcessInteractiveShell.instance()
+        return sorted(
+            name
+            for name, obj in shell.user_global_ns.items()
+            if not name.startswith("_") and self.check(obj)
+        )
+
+    def __init__(self, instances=None, *args, **kwargs):
+        """
+        Parameters
+        ----------
+        instances: class or tuple of classes
+            The classes that should be used for an instance check
+        """
+        super(LoadFromConsoleButton, self).__init__(*args, **kwargs)
+        self.setIcon(QIcon(get_icon("console-go.png")))
+        if instances is not None and inspect.isclass(instances):
+            instances = (instances,)
+        self._instances2check = instances
+        self.error_msg = PyErrorMessage(self)
+        self.clicked.connect(partial(self.get_from_shell, None))
+
+

+[docs]
+    def check(self, obj):
+        return (
+            True
+            if not self._instances2check
+            else isinstance(obj, self._instances2check)
+        )

+
+
+

+[docs]
+    def get_from_shell(self, oname=None):
+        """Open an input dialog, receive an object and emit the
+        :attr:`object_loaded` signal"""
+        if oname is None:
+            oname, ok = QInputDialog.getItem(
+                self,
+                "Select variable",
+                "Select a variable to import from the console",
+                self.potential_object_names,
+            )
+            if not ok:
+                return
+        if self.check(oname) and (
+            self._instances2check or not isinstance(oname, six.string_types)
+        ):
+            obj = oname
+            oname = "object"
+        else:
+            found, obj = self.get_obj(oname.strip())
+            if found:
+                if not self.check(obj):
+                    self.error_msg.showMessage(
+                        "Object must be an instance of %r, not %r"
+                        % (
+                            self.instances2check_str,
+                            "%s.%s"
+                            % (type(obj).__module__, type(obj).__name__),
+                        )
+                    )
+                    return
+            else:
+                if not oname.strip():
+                    msg = "The variable name must not be empty!"
+                else:
+                    msg = "Could not find object " + oname
+                self.error_msg.showMessage(msg)
+                return
+        self.object_loaded.emit(oname, obj)

+
+
+

+[docs]
+    def get_obj(self, oname):
+        """Load an object from the current shell"""
+        from psyplot_gui.main import mainwindow
+
+        return mainwindow.console.get_obj(oname)

+

+
+
+
+

+[docs]
+class ListValidator(QRegExpValidator):
+    """A validator class to validate that a string consists of strings in a
+    list of strings"""
+
+    def __init__(self, valid, sep=",", *args, **kwargs):
+        """
+        Parameters
+        ----------
+        valid: list of str
+            The possible choices
+        sep: str, optional
+            The separation pattern
+        ``*args,**kwargs``
+            Determined by PyQt5.QtGui.QValidator
+        """
+        patt = QtCore.QRegExp("^((%s)(;;)?)+$" % "|".join(valid))
+        super(QRegExpValidator, self).__init__(patt, *args, **kwargs)

+
+
+
+

+[docs]
+class PyErrorMessage(QErrorMessage):
+    """Widget designed to display python errors via the :meth:`showTraceback`
+    method"""
+
+

+[docs]
+    def showTraceback(self, header=None):
+        if is_running_tests():
+            raise
+
+        s = io.StringIO()
+        tb.print_exc(file=s)
+        last_tb = "<p>" + "<br>".join(s.getvalue().splitlines()) + "</p>"
+        header = header + "\n" if header else ""
+        self.showMessage(header + last_tb)
+        available_width = QDesktopWidget().availableGeometry().width() / 3.0
+        available_height = QDesktopWidget().availableGeometry().height() / 3.0
+        width = self.sizeHint().width()
+        height = self.sizeHint().height()
+        # The message window should cover at least one third of the screen
+        self.resize(max(available_width, width), max(available_height, height))

+
+
+

+[docs]
+    def excepthook(self, type, value, traceback):
+        s = io.StringIO()
+        tb.print_exception(type, value, traceback, file=s)
+        last_tb = "<p>" + "<br>".join(s.getvalue().splitlines()) + "</p>"
+        header = value.message if six.PY2 else str(value)
+        self.showMessage(header + "\n" + last_tb)
+        available_width = QDesktopWidget().availableGeometry().width() / 3.0
+        available_height = QDesktopWidget().availableGeometry().height() / 3.0
+        width = self.sizeHint().width()
+        height = self.sizeHint().height()
+        # The message window should cover at least one third of the screen
+        self.resize(max(available_width, width), max(available_height, height))

+

+
+
+
+

+[docs]
+class StreamToLogger(object):
+    """
+    Fake file-like stream object that redirects writes to a logger instance.
+    """
+
+    def __init__(self, logger, log_level=logging.INFO):
+        self.logger = logger
+        self.log_level = log_level
+        self.linebuf = ""
+
+

+[docs]
+    def write(self, buf):
+        for line in buf.rstrip().splitlines():
+            self.logger.log(self.log_level, line.rstrip())

+
+
+

+[docs]
+    def flush(self):
+        pass

+

+
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/compat/qtcompat.html b/_modules/psyplot_gui/compat/qtcompat.html new file mode 100644 index 0000000..bcc59f6 --- /dev/null +++ b/_modules/psyplot_gui/compat/qtcompat.html @@ -0,0 +1,543 @@ + + + + + + psyplot_gui.compat.qtcompat — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.compat.qtcompat

+"""Compatibility module for the different versions of PyQt"""
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+import sys
+
+# make sure that the right pyqt version suitable for the IPython console is
+# loaded
+import six
+
+from psyplot_gui.config.rcsetup import rcParams
+
+try:
+    from qtconsole.rich_jupyter_widget import RichJupyterWidget  # noqa: F401
+except ImportError:
+    pass
+try:
+    import PyQt5  # noqa: F401
+except ImportError:
+    from PyQt4 import QtCore, QtGui  # noqa: F401
+    from PyQt4.Qt import PYQT_VERSION_STR as PYQT_VERSION  # noqa: F401
+    from PyQt4.Qt import QT_VERSION_STR as QT_VERSION  # noqa: F401
+    from PyQt4.QtCore import Qt  # noqa: F401
+    from PyQt4.QtGui import (  # noqa: F401
+        QAbstractItemView,
+        QAction,
+        QActionGroup,
+        QApplication,
+        QCheckBox,
+    )
+    from PyQt4.QtGui import QComboBox as OrigQComboBox
+    from PyQt4.QtGui import (  # noqa: F401
+        QCompleter,
+        QDesktopWidget,
+        QDialog,
+        QDialogButtonBox,
+        QDockWidget,
+        QDoubleValidator,
+        QErrorMessage,
+        QFileDialog,
+        QFrame,
+        QGraphicsRectItem,
+        QGraphicsScene,
+        QGraphicsView,
+        QGridLayout,
+        QHBoxLayout,
+        QHeaderView,
+        QIcon,
+        QInputDialog,
+        QIntValidator,
+        QKeyEvent,
+        QKeySequence,
+        QLabel,
+        QLineEdit,
+        QListView,
+        QListWidget,
+        QListWidgetItem,
+        QMainWindow,
+        QMenu,
+        QMessageBox,
+        QPlainTextEdit,
+        QPushButton,
+        QRegExpValidator,
+        QScrollArea,
+        QSizePolicy,
+        QSortFilterProxyModel,
+        QSplitter,
+        QStackedWidget,
+        QStandardItem,
+        QStandardItemModel,
+        QStatusBar,
+        QStyledItemDelegate,
+        QStyleOptionViewItem,
+        QTableView,
+        QTableWidget,
+        QTableWidgetItem,
+        QTabWidget,
+        QTextCursor,
+        QTextEdit,
+        QToolBar,
+        QToolBox,
+        QToolButton,
+        QTreeWidget,
+        QTreeWidgetItem,
+        QValidator,
+        QVBoxLayout,
+        QWidget,
+    )
+    from PyQt4.QtTest import QTest  # noqa: F401
+    from PyQt4.QtWebKit import QWebView as QWebEngineView  # noqa: F401
+
+    with_qt5 = False
+    QSignalSpy = None
+
+    try:
+        from PyQt4.QtCore import QByteArray, QString
+    except ImportError:
+
+        def isstring(s):
+            return isinstance(s, six.string_types)
+
+    else:
+
+        def isstring(s):
+            return isinstance(
+                s, tuple(list(six.string_types) + [QString, QByteArray])
+            )
+
+    class QComboBox(OrigQComboBox):
+        currentTextChanged = QtCore.pyqtSignal(str)
+
+        def __init__(self, *args, **kwargs):
+            OrigQComboBox.__init__(self, *args, **kwargs)
+            self.currentIndexChanged.connect(self._emit_currentTextChanged)
+
+        def _emit_currentTextChanged(self, i):
+            self.currentTextChanged.emit(self.currentText())
+
+        def setCurrentText(self, s):
+            idx = self.findText(s)
+            if idx == -1:
+                self.addItem(s)
+                idx = self.findText(s)
+            self.setCurrentIndex(idx)
+
+else:
+    from PyQt5 import QtCore
+    from PyQt5.QtCore import QSortFilterProxyModel, Qt  # noqa: F401
+    from PyQt5.QtGui import (  # noqa: F401
+        QDoubleValidator,
+        QIcon,
+        QIntValidator,
+        QKeyEvent,
+        QKeySequence,
+        QRegExpValidator,
+        QStandardItem,
+        QStandardItemModel,
+        QTextCursor,
+        QValidator,
+    )
+    from PyQt5.QtWidgets import (  # noqa: F401
+        QAbstractItemView,
+        QAction,
+        QActionGroup,
+        QApplication,
+        QCheckBox,
+        QComboBox,
+        QCompleter,
+        QDesktopWidget,
+        QDialog,
+        QDialogButtonBox,
+        QDockWidget,
+        QErrorMessage,
+        QFileDialog,
+        QFrame,
+        QGraphicsRectItem,
+        QGraphicsScene,
+        QGraphicsView,
+        QGridLayout,
+        QHBoxLayout,
+        QHeaderView,
+        QInputDialog,
+        QLabel,
+        QLineEdit,
+        QListView,
+        QListWidget,
+        QListWidgetItem,
+        QMainWindow,
+        QMenu,
+        QMessageBox,
+        QPlainTextEdit,
+        QPushButton,
+        QScrollArea,
+        QSizePolicy,
+        QSplitter,
+        QStackedWidget,
+        QStatusBar,
+        QStyledItemDelegate,
+        QStyleOptionViewItem,
+        QTableView,
+        QTableWidget,
+        QTableWidgetItem,
+        QTabWidget,
+        QTextEdit,
+        QToolBar,
+        QToolBox,
+        QToolButton,
+        QTreeWidget,
+        QTreeWidgetItem,
+        QVBoxLayout,
+        QWidget,
+    )
+
+    if rcParams["help_explorer.use_webengineview"]:
+        try:
+            from PyQt5.QtWebEngineWidgets import QWebEngineView  # noqa: F401
+        except ImportError:
+            from PyQt5.QtWebKitWidgets import (  # noqa: F401
+                QWebView as QWebEngineView,
+            )
+    else:
+        QWebEngineView = None
+    from PyQt5 import QtGui  # noqa: F401
+    from PyQt5.Qt import PYQT_VERSION_STR as PYQT_VERSION  # noqa: F401
+    from PyQt5.Qt import QT_VERSION_STR as QT_VERSION  # noqa: F401
+    from PyQt5.QtTest import QSignalSpy, QTest  # noqa: F401
+
+    with_qt5 = True
+
+

+[docs]
+    def isstring(s):
+        return isinstance(s, six.string_types)

+
+
+
+

+[docs]
+def asstring(s):
+    return six.text_type(s)

+
+
+
+if sys.platform == "darwin":
+    # make sure to register the open file event
+    OrigQApplication = QApplication
+
+    class QApplication(OrigQApplication):
+        """Reimplemented QApplication with open file event"""
+
+        def event(self, event):
+            from psyplot_gui.config.rcsetup import rcParams
+
+            if (
+                rcParams["main.listen_to_port"]
+                and event.type() == QtCore.QEvent.FileOpen
+            ):
+                from psyplot_gui.main import mainwindow
+
+                if mainwindow is not None:
+                    opened = mainwindow.open_files([event.file()])
+                    if opened:
+                        return True
+            return super(QApplication, self).event(event)
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/config/rcsetup.html b/_modules/psyplot_gui/config/rcsetup.html new file mode 100644 index 0000000..d275d66 --- /dev/null +++ b/_modules/psyplot_gui/config/rcsetup.html @@ -0,0 +1,628 @@ + + + + + + psyplot_gui.config.rcsetup — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.config.rcsetup

+"""Default management of the psyplot_gui package
+
+This module defines the necessary configuration parts for the psyplot gui"""
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+import logging
+
+import six
+from matplotlib.rcsetup import validate_bool, validate_int
+from psyplot.config.rcsetup import (
+    RcParams,
+    psyplot_fname,
+    validate_bool_maybe_none,
+    validate_stringlist,
+)
+
+
+

+[docs]
+def try_and_error(*funcs):
+    """Apply multiple validation functions
+
+    Parameters
+    ----------
+    ``*funcs``
+        Validation functions to test
+
+    Returns
+    -------
+    function"""
+
+    def validate(value):
+        exc = None
+        for func in funcs:
+            try:
+                return func(value)
+            except (ValueError, TypeError) as e:
+                exc = e
+        raise exc
+
+    return validate

+
+
+
+# -----------------------------------------------------------------------------
+# ------------------------- validation functions ------------------------------
+# -----------------------------------------------------------------------------
+
+
+

+[docs]
+def validate_str(s):
+    """Validate a string
+
+    Parameters
+    ----------
+    s: str
+
+    Returns
+    -------
+    str
+
+    Raises
+    ------
+    ValueError"""
+    if not isinstance(s, six.string_types):
+        raise ValueError("Did not found string!")
+    return six.text_type(s)

+
+
+
+

+[docs]
+def validate_none(b):
+    """Validate that None is given
+
+    Parameters
+    ----------
+    b: {None, 'none'}
+        None or string (the case is ignored)
+
+    Returns
+    -------
+    None
+
+    Raises
+    ------
+    ValueError"""
+    if isinstance(b, six.string_types):
+        b = b.lower()
+    if b is None or b == "none":
+        return None
+    else:
+        raise ValueError('Could not convert "%s" to None' % b)

+
+
+
+

+[docs]
+def validate_all(v):
+    """Test if ``v == 'all'``"""
+    if v != "all":
+        raise ValueError("The value must be 'all'")
+    return six.text_type(v)

+
+
+
+

+[docs]
+class GuiRcParams(RcParams):
+    """RcParams for the psyplot-gui package."""
+
+    HEADER = RcParams.HEADER.replace(
+        "psyplotrc.yml", "psyplotguirc.yml"
+    ).replace("PSYPLOTRC", "psyplotrc.yml")
+
+

+[docs]
+    def load_from_file(self, fname=None):
+        """
+        Update rcParams from user-defined settings
+
+        This function updates the instance with what is found in `fname`
+
+        Parameters
+        ----------
+        fname: str
+            Path to the yaml configuration file. Possible keys of the
+            dictionary are defined by :data:`config.rcsetup.defaultParams`.
+            If None, the :func:`config.rcsetup.psyplot_fname` function is used.
+
+        See Also
+        --------
+        dump_to_file, psyplot_fname"""
+        fname = fname or psyplot_fname(
+            env_key="PSYPLOTGUIRC", fname="psyplotguirc.yml"
+        )
+        if fname:
+            super(GuiRcParams, self).load_from_file(fname)

+
+
+    def _load_plugin_entrypoints(self):
+        """Load the modules for the psyplot plugins
+
+        Yields
+        ------
+        pkg_resources.EntryPoint
+            The entry point for the psyplot plugin module"""
+        from pkg_resources import iter_entry_points
+
+        inc = self["plugins.include"]
+        exc = self["plugins.exclude"]
+        logger = logging.getLogger(__name__)
+        self._plugins = self._plugins or []
+        for ep in iter_entry_points("psyplot_gui"):
+            try:
+                ep.module
+            except AttributeError:  # python<3.10
+                try:
+                    ep.module = ep.pattern.match(ep.value).group("module")
+                except AttributeError:  # python<3.8
+                    ep.module = ep.module_name
+
+            plugin_name = "%s:%s:%s" % (ep.module, ":".join(ep.attrs), ep.name)
+            # check if the user wants to explicitly this plugin
+            include_user = None
+            if inc:
+                include_user = (
+                    ep.module in inc
+                    or ep.name in inc
+                    or "%s:%s" % (ep.module, ":".join(ep.attrs)) in inc
+                )
+            if include_user is None and exc == "all":
+                include_user = False
+            elif include_user is None:
+                # check for exclude
+                include_user = not (
+                    ep.module in exc
+                    or ep.name in exc
+                    or "%s:%s" % (ep.module, ":".join(ep.attrs)) in exc
+                )
+            if not include_user:
+                logger.debug(
+                    "Skipping plugin %s: Excluded by user", plugin_name
+                )
+            else:
+                logger.debug("Loading plugin %s", plugin_name)
+                self._plugins.append(str(ep))
+                yield ep
+
+

+[docs]
+    def load_plugins(self, *args, **kwargs):
+        """
+        Load the plugins for the psyplot_gui MainWindow
+
+        Returns
+        -------
+        dict
+            A mapping from entry point name to the imported widget class
+
+        Notes
+        -----
+        ``*args`` and ``**kwargs`` are ignored
+        """
+
+        def format_ep(ep):
+            return "%s:%s:%s" % (ep.module_name, ":".join(ep.attrs), ep.name)
+
+        return {
+            format_ep(ep): ep.load() for ep in self._load_plugin_entrypoints()
+        }

+

+
+
+
+#: :class:`dict` with default values and validation functions
+defaultParams = {
+    # gui settings
+    "backend": [
+        "psyplot",
+        try_and_error(validate_str, validate_none),
+        "Backend to use when using the graphical user interface. The current "
+        "backend is used and no changes are made. Note that it is usually not "
+        "possible to change the backend after importing the psyplot.project "
+        "module. The default backend embeds the figures into the ",
+    ],
+    "help_explorer.use_webengineview": [
+        True,
+        validate_bool,
+        "Enable the PyQt5.QtWebEngineWidgets.QWebEngineView which might not "
+        "work under certain circumstances.",
+    ],
+    "help_explorer.use_intersphinx": [
+        None,
+        validate_bool_maybe_none,
+        "Use the intersphinx extension and link to the online documentations "
+        "of matplotlib, pyplot, psyplot, numpy, etc. when converting rst "
+        "docstrings. The inventories are loaded when the first object is "
+        "documented. If None, intersphinx is only used when "
+        "`help_explorer.online` is True and you are not using windows",
+    ],
+    "help_explorer.render_docs_parallel": [
+        True,
+        validate_bool,
+        "Boolean whether the html docs are rendered in a separate process",
+    ],
+    "help_explorer.online": [
+        None,
+        validate_bool_maybe_none,
+        "Switch that controls whether the online functions of the help "
+        "explorer shall be enabled. False implies that "
+        "help_explorer.use_intersphinx is set to False",
+    ],
+    "console.start_channels": [
+        True,
+        validate_bool,
+        "Start the different channels of the KernelClient",
+    ],
+    "console.connect_to_help": [
+        True,
+        validate_bool,
+        "Whether the console shall be connected to the help_explorer or not",
+    ],
+    "console.auto_set_mp": [
+        True,
+        validate_bool,
+        "If True, then the 'mp' variable in the console is automatically set "
+        "when the current main project changes",
+    ],
+    "console.auto_set_sp": [
+        True,
+        validate_bool,
+        "If True, then the 'sp' variable in the console is automatically set "
+        "when the current sub project changes",
+    ],
+    "main.open_files_port": [
+        30124,
+        validate_int,
+        "The port number used when new files are opened",
+    ],
+    "main.listen_to_port": [
+        True,
+        validate_bool,
+        "If True and the psyplot gui is already running, new files are opened "
+        "in that gui",
+    ],
+    "main.opengl": [
+        "software",
+        validate_str,
+        "The opengl implementation to use. Should be one of 'software', "
+        "'desktop', 'gles' or 'automatic'.",
+    ],
+    "content.load_tooltips": [
+        True,
+        validate_bool,
+        "If True, a lazy load is performed on the arrays and data sets and "
+        "their string representation is displayed as tool tip. This part of "
+        "the data into memory. It is recommended to set this to False for "
+        "remote data.",
+    ],
+    "fmt.sort_by_key": [
+        True,
+        validate_bool,
+        "If True, the formatoptions in the Formatoptions widget are sorted by "
+        "their formatoption key rather than by their name.",
+    ],
+    "plugins.include": [
+        None,
+        try_and_error(validate_none, validate_stringlist),
+        "The plugins to load. Can be either None to load all that are not "
+        "explicitly excluded by the 'plugins.exclude' key or a list of "
+        "plugins to include. List items can be either module names, plugin "
+        "names or the module name and widget via '<module_name>:<widget>'",
+    ],
+    "plugins.exclude": [
+        [],
+        try_and_error(validate_all, validate_stringlist),
+        "The plugins to exclude from loading. Can be either 'all' to exclude "
+        "all plugins or a list like in 'plugins.include'.",
+    ],
+}
+
+#: :class:`~psyplot.config.rcsetup.RcParams` instance that stores default
+#: formatoptions and configuration settings.
+rcParams = GuiRcParams(defaultParams=defaultParams)
+rcParams.update({key: val[0] for key, val in defaultParams.items()})
+rcParams.load_from_file()
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/console.html b/_modules/psyplot_gui/console.html new file mode 100644 index 0000000..1acc57f --- /dev/null +++ b/_modules/psyplot_gui/console.html @@ -0,0 +1,725 @@ + + + + + + psyplot_gui.console — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.console

+"""
+An example of opening up an RichJupyterWidget in a PyQT Application, this can
+execute either stand-alone or by importing this file and calling
+inprocess_qtconsole.show().
+Based on the earlier example in the IPython repository, this has
+been updated to use qtconsole.
+"""
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+import logging
+import re
+import sys
+
+import ipykernel
+import psyplot
+import psyplot.project as psy
+from psyplot.docstring import docstrings
+from qtconsole.inprocess import QtInProcessKernelManager
+from tornado import ioloop
+from zmq.eventloop import ioloop as zmq_ioloop
+
+import psyplot_gui
+from psyplot_gui import rcParams
+from psyplot_gui.common import DockMixin, StreamToLogger
+from psyplot_gui.compat.qtcompat import (
+    QKeySequence,
+    Qt,
+    QtCore,
+    QTextCursor,
+    QTextEdit,
+    asstring,
+    with_qt5,
+)
+
+try:
+    from qtconsole.inprocess import QtInProcessRichJupyterWidget
+except ImportError:
+    from qtconsole.rich_jupyter_widget import (
+        RichJupyterWidget as QtInProcessRichJupyterWidget,
+    )
+
+
+#: HACK: Boolean that is True if the prompt should be used. This unfortunately
+#: is necessary for qtconsole >= 4.3 when running the tests
+_with_prompt = True
+
+
+modules2import = [
+    ("psyplot.project", "psy"),
+    ("xarray", "xr"),
+    ("pandas", "pd"),
+    ("numpy", "np"),
+]
+
+symbols_patt = re.compile(r"[^\'\"a-zA-Z0-9_.]")
+
+
+logger = logging.getLogger(__name__)
+
+
+

+[docs]
+def init_asyncio_patch():
+    """set default asyncio policy to be compatible with tornado
+    Tornado 6 (at least) is not compatible with the default
+    asyncio implementation on Windows
+    Pick the older SelectorEventLoopPolicy on Windows
+    if the known-incompatible default policy is in use.
+    do this as early as possible to make it a low priority and overrideable
+    ref: https://github.com/tornadoweb/tornado/issues/2608
+    FIXME: if/when tornado supports the defaults in asyncio,
+           remove and bump tornado requirement for py38
+    """
+    if sys.platform.startswith("win") and sys.version_info >= (3, 8):
+        import asyncio
+
+        try:
+            from asyncio import (
+                WindowsProactorEventLoopPolicy,
+                WindowsSelectorEventLoopPolicy,
+            )
+        except ImportError:
+            pass
+            # not affected
+        else:
+            if (
+                type(asyncio.get_event_loop_policy())
+                is WindowsProactorEventLoopPolicy
+            ):
+                # WindowsProactorEventLoopPolicy is not compatible with tornado 6
+                # fallback to the pre-3.8 default of Selector
+                asyncio.set_event_loop_policy(WindowsSelectorEventLoopPolicy())

+
+
+
+

+[docs]
+class IPythonControl(QTextEdit):
+    """A modified control to show the help of objects in the help explorer"""
+
+

+[docs]
+    def keyPressEvent(self, event):
+        """Reimplement Qt Method - Basic keypress event handler"""
+        key = event.key()
+        if key == Qt.Key_Question or key == Qt.Key_ParenLeft:
+            self.parentWidget().show_current_help()
+        elif key == Qt.Key_I and (event.modifiers() & Qt.ControlModifier):
+            self.parentWidget().show_current_help(True, True)
+        # Let the parent widget handle the key press event
+        QTextEdit.keyPressEvent(self, event)

+

+
+
+
+

+[docs]
+class ConsoleWidget(QtInProcessRichJupyterWidget, DockMixin):
+    """A console widget to access an inprocess shell"""
+
+    custom_control = IPythonControl
+
+    dock_position = Qt.RightDockWidgetArea
+
+    title = "Console"
+
+    rc = rcParams.find_and_replace("console.", pattern_base=r"console\.")
+
+    intro_msg = ""
+
+    run_script = QtCore.pyqtSignal(list)
+
+    run_command = QtCore.pyqtSignal(list)
+
+    _closed = True
+
+    def __init__(self, main, *args, **kwargs):
+        """
+        Parameters
+        ----------
+        help_explorer: psyplot_gui.help_explorer.HelpExplorer or None
+            A widget that can be used to show the documentation of an object
+        ``*args,**kwargs``
+            Any other keyword argument for the
+            :class:`qtconsole.rich_jupyter_widget.RichJupyterWidget`
+        """
+        self._closed = False
+
+        # Create an in-process kernel
+        # >>> print_process_id()
+        # will print the same process ID as the main process
+        init_asyncio_patch()
+
+        kernel_manager = QtInProcessKernelManager()
+        # on windows, sys.stdout may be None when using pythonw.exe. Therefore
+        # we just us a StringIO for security
+        orig_stdout = sys.stdout
+        if sys.stdout is None:
+            sys.stdout = StreamToLogger(logger)
+        orig_stderr = sys.stderr
+        if sys.stderr is None:
+            sys.stderr = StreamToLogger(logger)
+        kernel_manager.start_kernel(show_banner=False)
+        if ipykernel.__version__ < "5.1.1":
+            # monkey patch to fix
+            # https://github.com/ipython/ipykernel/issues/370
+            def _abort_queues(kernel):
+                pass
+
+            kernel_manager.kernel._abort_queues = _abort_queues
+        sys.stdout = orig_stdout
+        sys.stderr = orig_stderr
+        kernel = kernel_manager.kernel
+        kernel.gui = "qt4" if not with_qt5 else "qt"
+
+        kernel_client = kernel_manager.client()
+        if rcParams["console.start_channels"]:
+            kernel_client.start_channels()
+
+        self.help_explorer = kwargs.pop("help_explorer", None)
+
+        super(ConsoleWidget, self).__init__(*args, parent=main, **kwargs)
+
+        self.intro_msg = (
+            docstrings.dedent(
+                """
+        psyplot version: %s
+
+        gui version: %s
+
+        The console provides you the full access to the current project and
+        plots.
+        To make your life easier, the following modules have been imported
+
+            - %s
+
+        Furthermore, each time you change the selection or the content in the
+        plot objects viewer, the `sp` (the selection) and `mp` (all arrays)
+        variables in the console are adjusted. To disable this behaviour, set::
+
+            >>> import psyplot_gui
+            >>> psyplot_gui.rcParams["console.auto_set_mp"] = False
+            >>> psyplot_gui.rcParams["console.auto_set_sp"] = False
+
+        To inspect and object in the console and display it's documentation in
+        the help explorer, type 'Ctrl + I' or a '?' after the object"""
+            )
+            % (
+                psyplot.__version__,
+                psyplot_gui.__version__,
+                "\n    - ".join("%s as %s" % t for t in modules2import),
+            )
+        )
+
+        self.kernel_manager = kernel_manager
+        self.kernel_client = kernel_client
+
+        self.run_command_in_shell(
+            "\n".join("import %s as %s" % t for t in modules2import)
+        )
+        self.exit_requested.connect(self._close_mainwindow)
+        self.exit_requested.connect(QtCore.QCoreApplication.instance().quit)
+
+        # we overwrite the short cut here because the 'Ctrl+S' shortcut is
+        # reserved for mainwindows save action
+        try:
+            main.register_shortcut(
+                self.export_action,
+                QKeySequence("Ctrl+Alt+S", QKeySequence.NativeText),
+            )
+        except AttributeError:
+            pass
+
+        psy.Project.oncpchange.connect(self.update_mp)
+        psy.Project.oncpchange.connect(self.update_sp)
+
+        self.run_script.connect(self._run_script_in_shell)
+        self.run_command.connect(self._run_command_in_shell)
+
+        # HACK: we set the IOloop for the InProcessKernel here manually without
+        # starting it (not necessary because QApplication has a blocking
+        # IOLoop). However, we need this because the ZMQInteractiveShell wants
+        # to call
+        #     loop = self.kernel.io_loop
+        #     loop.call_later(0.1, loop.stop)``
+        zmq_ioloop.install()
+        self.kernel_manager.kernel.io_loop = ioloop.IOLoop.current()
+
+

+[docs]
+    def update_mp(self, project):
+        """Update the `mp` variable in the shell is
+        ``rcParams['console.auto_set_mp']`` with a main project"""
+        if self.rc["auto_set_mp"] and project is not None and project.is_main:
+            try:
+                self.run_command_in_shell("mp = psy.gcp(True)")
+            except RuntimeError:
+                # probably running a script that via IPythons `run` magick
+                pass

+
+
+

+[docs]
+    def update_sp(self, project):
+        """Update the `sp` variable in the shell is
+        ``rcParams['console.auto_set_sp']`` with a sub project"""
+        if self.rc["auto_set_sp"] and (project is None or not project.is_main):
+            try:
+                self.run_command_in_shell("sp = psy.gcp()")
+            except RuntimeError:
+                # probably running a script that via IPythons `run` magick
+                pass

+
+
+

+[docs]
+    def show_current_help(self, to_end=False, force=False):
+        """Show the help of the object at the cursor position if
+        ``rcParams['console.connect_to_help']`` is set"""
+        if not force and not self.rc["connect_to_help"]:
+            return
+        obj_text = self.get_current_object(to_end)
+        if obj_text is not None and self.help_explorer is not None:
+            found, obj = self.get_obj(obj_text)
+            if found:
+                self.help_explorer.show_help(obj, obj_text)
+                self._control.setFocus()

+
+
+

+[docs]
+    def get_obj(self, obj_text):
+        """
+        Get the object from the shell specified by `obj_text`
+
+        Parameters
+        ----------
+        obj_text: str
+            The name of the variable as it is stored in the shell
+
+        Returns
+        -------
+        bool
+            True, if the object could be found
+        object or None
+            The requested object or None if it could not be found"""
+        info = self.kernel_manager.kernel.shell._object_find(obj_text)
+        if info.found:
+            return True, info.obj
+        else:
+            return False, None

+
+
+

+[docs]
+    def get_current_object(self, to_end=False):
+        """Get the name of the object at cursor position"""
+        c = self._control
+        if not _with_prompt:
+            try:  # qtconsole >4.3 uses the _prompt_cursor attribute
+                cursor = self._prompt_cursor
+            except AttributeError:
+                cursor = c.textCursor()
+        else:
+            cursor = c.textCursor()
+        curr = cursor.position()
+        start = curr - cursor.positionInBlock()
+        txt = c.toPlainText()[start:curr]
+        eol = ""
+        if to_end:
+            cursor.movePosition(QTextCursor.EndOfBlock)
+            end = cursor.position()
+            if end > curr:
+                eol = c.toPlainText()[curr:end]
+                m = symbols_patt.search(eol)
+                if m:
+                    eol = eol[: m.start()]
+
+        if not txt:
+            return txt
+        txt = asstring(txt)
+        txt = txt.rsplit("\n", 1)[-1]
+        txt_end = ""
+        for startchar, endchar in ["[]", "()"]:
+            if txt.endswith(endchar):
+                pos = txt.rfind(startchar)
+                if pos:
+                    txt_end = txt[pos:]
+                    txt = txt[:pos]
+        tokens = symbols_patt.split(txt)
+        token = None
+        try:
+            while token is None or symbols_patt.match(token):
+                token = tokens.pop()
+            if token.endswith("."):
+                token = token[:-1]
+            if token.startswith("."):
+                # Invalid object name
+                return None
+            token += txt_end
+            if token:
+                return token + eol
+        except IndexError:
+            return None

+
+
+    def _run_script_in_shell(self, args):
+        self.run_script_in_shell(args[0][0])
+
+

+[docs]
+    def run_script_in_shell(self, script):
+        """Run a script in the shell"""
+        self.kernel_manager.kernel.shell.run_line_magic("run", script)

+
+
+    def _run_command_in_shell(self, args):
+        # 0: filenames
+        # 1: project
+        # 2: command
+        self.run_command_in_shell(args[2])
+
+

+[docs]
+    def run_command_in_shell(self, code, *args, **kwargs):
+        """Run a script in the shell"""
+        ret = self.kernel_manager.kernel.shell.run_code(code, *args, **kwargs)
+        import IPython
+
+        if IPython.__version__ < "7.0":  # run_code is an asyncio.coroutine
+            return ret
+        else:
+            import asyncio
+
+            gathered = asyncio.gather(ret)
+            loop = asyncio.get_event_loop()
+            ret = loop.run_until_complete(gathered)
+            return ret[0]

+
+
+    def _close_mainwindow(self):
+        from psyplot_gui.main import mainwindow
+
+        if mainwindow is not None:
+            mainwindow.close()
+        else:
+            self.close()
+
+

+[docs]
+    def close(self):
+        if self.kernel_client.channels_running:
+            self.kernel_client.stop_channels()
+        self._closed = True
+        return super(ConsoleWidget, self).close()

+
+
+

+[docs]
+    def eventFilter(self, *args, **kwargs):
+        if self._closed:
+            return False
+        return super().eventFilter(*args, **kwargs)

+

+
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/content_widget.html b/_modules/psyplot_gui/content_widget.html new file mode 100644 index 0000000..94f438b --- /dev/null +++ b/_modules/psyplot_gui/content_widget.html @@ -0,0 +1,1196 @@ + + + + + + psyplot_gui.content_widget — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.content_widget

+# -*- coding: utf-8 -*-
+"""Module containing the project content widget to display the selection
+
+This module redefines the :class:`psyplot.project.Project` class with
+additional features for an interactive usage with graphical qt user interface.
+There is no need to import this module because the
+:class:`GuiProject` class defined here replaces the project class in the
+:mod:`psyplot.project` module."""
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+import os.path as osp
+import re
+import sys
+import weakref
+from itertools import chain
+from xml.sax.saxutils import escape
+
+import sip
+import six
+from psyplot.config.rcsetup import safe_list
+from psyplot.data import ArrayList, InteractiveList
+from psyplot.project import Project, gcp, scp
+from psyplot.utils import _TempBool
+
+from psyplot_gui import rcParams
+from psyplot_gui.common import DockMixin
+from psyplot_gui.compat.qtcompat import (
+    QAbstractItemView,
+    QAction,
+    QHBoxLayout,
+    QListWidget,
+    QListWidgetItem,
+    QMenu,
+    QPushButton,
+    Qt,
+    QtCore,
+    QToolBox,
+    QTreeWidget,
+    QTreeWidgetItem,
+    QVBoxLayout,
+    QWidget,
+)
+
+html_escape_table = {'"': "&quot;", "'": "&apos;"}
+
+
+

+[docs]
+def escape_html(s):
+    return escape(s, html_escape_table)

+
+
+
+

+[docs]
+class ArrayItem(QListWidgetItem):
+    """A listwidget item that takes it's informations from a given array"""
+
+    #: The :class:`psyplot.data.InteractiveList` or
+    #: :class:`psyplot.data.InteractiveArray` instance
+    arr = None
+
+    def __init__(self, ref, *args, **kwargs):
+        """
+        Parameters
+        ----------
+        ref: weakref
+            The weak reference to the array to display
+        ``*args,**kwargs``
+            Are determined by the parent class
+        """
+        arr = ref()
+        super(ArrayItem, self).__init__(arr._short_info(), **kwargs)
+        self.arr = ref
+        # make sure that the item is updated when the array changes
+        arr.onupdate.connect(self.set_text_from_array)
+        self.set_text_from_array()
+
+

+[docs]
+    def set_text_from_array(self):
+        """Set the text and tooltop from the
+        :meth:`psyplot.data.InteractiveArray._short_info` and __str__ methods
+        """
+        if not sip.isdeleted(self):
+            self.setText(self.arr()._short_info())
+            if rcParams["content.load_tooltips"]:
+                if isinstance(self.arr(), InteractiveList):
+                    self.setToolTip(str(self.arr()))
+                else:
+                    self.setToolTip(str(self.arr().arr))
+        else:
+            self.disconnect_from_array()

+
+
+

+[docs]
+    def disconnect_from_array(self):
+        arr = self.arr()
+        if arr is not None:
+            arr.onupdate.disconnect(self.set_text_from_array)
+        del self.arr

+

+
+
+
+

+[docs]
+class PlotterList(QListWidget):
+    """QListWidget showing multiple ArrayItems of one Plotter class"""
+
+    #: str. The name of the attribute of the :class:`psyplot.project.Project`
+    #: class
+    project_attribute = None
+
+    #: boolean. True if the current project does not contain any arrays in the
+    #: attribute identified by the :attr:`project_attribute`
+    is_empty = True
+
+    _no_project_update = _TempBool()
+
+    updated_from_project = QtCore.pyqtSignal(QListWidget)
+
+    # Determine whether the plotter could be loaded
+    can_import_plotter = True
+
+    @property
+    def arrays(self):
+        """List of The InteractiveBase instances in this list"""
+        return ArrayList(
+            [
+                getattr(item.arr(), "arr", item.arr())
+                for item in self.array_items
+            ]
+        )
+
+    @property
+    def array_items(self):
+        """Iterable of :class:`ArrayItem` items in this list"""
+        return filter(
+            lambda i: i is not None, map(self.item, range(self.count()))
+        )
+
+    def __init__(self, plotter_type=None, *args, **kwargs):
+        """
+        Parameters
+        ----------
+        plotter_type: str or None
+            If str, it mus be an attribute name of the
+            :class:`psyplot.project.Project` class. Otherwise the full project
+            is used
+        ``*args,**kwargs``
+            Are determined by the parent class
+
+        Notes
+        -----
+        When initialized, the content of the list is determined by
+        ``gcp(True)`` and ``gcp()``"""
+        super(PlotterList, self).__init__(*args, **kwargs)
+        self.project_attribute = plotter_type
+        self.setSelectionMode(QAbstractItemView.MultiSelection)
+        self.itemSelectionChanged.connect(self.update_cp)
+        self.update_from_project(gcp(True))
+        self.update_from_project(gcp())
+
+

+[docs]
+    def update_from_project(self, project):
+        """Update the content from the given Project
+
+        Parameters
+        ----------
+        project: psyplot.project.Project
+            If the project is a main project, new items will be added.
+            Otherwise only the current selection changes"""
+        if self._no_project_update:
+            return
+        if not self.can_import_plotter:
+            # remove the current items
+            self.disconnect_items()
+            return
+        attr = self.project_attribute
+        # stop if the module of the plotter has not yet been imported
+        if attr and Project._registered_plotters[attr][0] not in sys.modules:
+            return
+        try:
+            arrays = project if not attr else getattr(project, attr)
+            mp = gcp(True) if project is None else project.main
+            main_arrays = mp if not attr else getattr(mp, attr)
+        except ImportError:  # plotter could not be loaded
+            self.is_empty = True
+            self.can_import_plotter = False
+            return
+        self.is_empty = not bool(main_arrays)
+        with self._no_project_update:
+            if project is None:
+                for item in self.array_items:
+                    item.setSelected(False)
+            elif project.is_main:
+                old_arrays = self.arrays
+                # remove outdated items
+                i = 0
+                for arr in old_arrays:
+                    if arr not in arrays:
+                        item = self.takeItem(i)
+                        item.disconnect_from_array()
+                    else:
+                        i += 1
+                # add new items
+                for arr in arrays:
+                    if arr not in old_arrays:
+                        item = ArrayItem(weakref.ref(arr.psy), parent=self)
+                        self.addItem(item)
+                # resort to match the project
+                for arr in reversed(main_arrays):
+                    for i, item in enumerate(self.array_items):
+                        if item.arr() is arr.psy:
+                            self.insertItem(0, self.takeItem(i))
+            cp = gcp()
+            for item in self.array_items:
+                item.setSelected(getattr(item.arr(), "arr", item.arr()) in cp)
+        self.updated_from_project.emit(self)

+
+
+

+[docs]
+    def update_cp(self, *args, **kwargs):
+        """Update the current project from what is selected in this list"""
+        if not self._no_project_update:
+            mp = gcp(True)
+            sp = gcp()
+            selected = [item.arr().arr_name for item in self.selectedItems()]
+            arrays = self.arrays
+            other_selected = [
+                arr.psy.arr_name for arr in sp if arr not in arrays
+            ]
+            with self._no_project_update:
+                scp(mp(arr_name=selected + other_selected))

+
+
+

+[docs]
+    def disconnect_items(self):
+        """Disconnect the items in this list from the arrays"""
+        for item in list(self.array_items):
+            item.disconnect_from_array()
+            self.takeItem(self.indexFromItem(item).row())
+        self.is_empty = True

+

+
+
+
+

+[docs]
+class ProjectContent(QToolBox):
+    """Display the content in the current project
+
+    This toolbox contains several :class:`PlotterList` that show the content
+    of the current main and subproject"""
+
+    #: :class:`dict` containing the :class:`PlotterList` instances
+    #: of the different selection attributes
+    lists = dict()
+
+    @property
+    def current_names(self):
+        return [self.itemText(i) for i in range(self.count())]
+
+    def __init__(self, *args, **kwargs):
+        super(ProjectContent, self).__init__(*args, **kwargs)
+        self.lists = dict()
+        for attr in chain(["All"], sorted(Project._registered_plotters)):
+            item = self.add_plotterlist(attr, force=(attr == "All"))
+            self.lists[attr] = item
+        self.currentChanged.connect(self.update_current_list)
+        Project.oncpchange.connect(self.update_lists)
+
+

+[docs]
+    def enable_list(self, list_widget):
+        """Enable a given list widget based upon whether it is empty or not"""
+        i = self.indexOf(list_widget)
+        if i != -1:
+            self.setItemEnabled(i, not list_widget.is_empty)

+
+
+

+[docs]
+    def add_plotterlist(self, identifier, force=False):
+        """Create a :class:`PlotterList` from an identifier from the
+        :class:`psyplot.project.Project` class"""
+        attr = identifier if identifier != "All" else None
+        item = PlotterList(attr)
+        if not item.can_import_plotter:
+            return item
+        if force or not item.is_empty:
+            item.setParent(self)
+            item.updated_from_project.connect(self.enable_list)
+            self.addItem(item, identifier)
+            i = self.indexOf(item)
+            self.setItemEnabled(i, not item.is_empty)
+        return item

+
+
+

+[docs]
+    def update_current_list(self):
+        """Update the current list from the current main and sub project"""
+        self.currentWidget().update_from_project(gcp(True))
+        self.currentWidget().update_from_project(gcp())

+
+
+

+[docs]
+    def update_lists(self, p):
+        # check new lists
+        current_items = self.current_names
+        for name, l in self.lists.items():
+            if not p.is_main:
+                l.update_from_project(p.main)
+            l.update_from_project(p)
+            if l.is_empty:
+                l.disconnect_items()
+            if name != "All" and l.is_empty:
+                i = self.indexOf(l)
+                self.removeItem(i)
+            elif not l.is_empty and name not in current_items:
+                self.addItem(l, name)

+

+
+
+
+

+[docs]
+class SelectAllButton(QPushButton):
+    """A button to select all data objects in the current main project"""
+
+    def __init__(self, *args, **kwargs):
+        super(SelectAllButton, self).__init__(*args, **kwargs)
+        self.setToolTip(
+            "Click to select all data arrays in the entire project"
+        )
+        self.clicked.connect(self.select_all)
+        Project.oncpchange.connect(self.enable_from_project)
+
+

+[docs]
+    def select_all(self):
+        """Select all arrays"""
+        scp(gcp(True)[:])

+
+
+

+[docs]
+    def enable_from_project(self, project):
+        """Enable the button if the given project is not empty"""
+        self.setEnabled(bool(project.main if project is not None else gcp(1)))

+

+
+
+
+

+[docs]
+class SelectNoneButton(QPushButton):
+    """A button to select no data objects in the current main project"""
+
+    def __init__(self, *args, **kwargs):
+        super(SelectNoneButton, self).__init__(*args, **kwargs)
+        self.setToolTip("Click to deselect all data arrays")
+        self.clicked.connect(self.select_none)
+        Project.oncpchange.connect(self.enable_from_project)
+
+

+[docs]
+    def select_none(self):
+        """Clear current subproject"""
+        scp(gcp(True)[:0])

+
+
+

+[docs]
+    def enable_from_project(self, project):
+        """Enable the button if the given project is not empty"""
+        self.setEnabled(bool(project))

+

+
+
+
+

+[docs]
+class ProjectContentWidget(QWidget, DockMixin):
+    """A combination of selection buttons and the ProjectContent"""
+
+    def __init__(self, *args, **kwargs):
+        super(ProjectContentWidget, self).__init__(*args, **kwargs)
+        vbox = QVBoxLayout()
+        # create buttons for unselecting and selecting all arrays
+        self.unselect_button = SelectNoneButton("Unselect all", parent=self)
+        self.select_all_button = SelectAllButton("Select all", parent=self)
+        button_hbox = QHBoxLayout()
+        button_hbox.addWidget(self.unselect_button)
+        button_hbox.addWidget(self.select_all_button)
+        mp = gcp(True)
+        self.unselect_button.setEnabled(bool(mp))
+        self.select_all_button.setEnabled(bool(mp))
+        # create widget showing the content of the current project
+        self.content_widget = ProjectContent(parent=self)
+        vbox.addLayout(button_hbox)
+        vbox.addWidget(self.content_widget)
+        self.setLayout(vbox)

+
+
+
+

+[docs]
+class DatasetTreeItem(QTreeWidgetItem):
+    """A QTreeWidgetItem showing informations on one dataset in the main
+    project"""
+
+    def __init__(self, ds, columns=[], *args, **kwargs):
+        super(DatasetTreeItem, self).__init__(*args, **kwargs)
+        self.variables = variables = QTreeWidgetItem(0)
+        self.columns = columns
+        variables.setText(0, "variables (%i)" % len(ds))
+        self.coords = coords = QTreeWidgetItem(0)
+        coords.setText(0, "coords (%i)" % len(ds.coords))
+        self.attrs = attrs = QTreeWidgetItem(0)
+        attrs.setText(0, "Global Attributes (%i)" % len(ds.attrs))
+        self.addChildren([variables, coords])
+        self.addChild(variables)
+        self.addChild(attrs)
+        self.add_variables(ds)
+        self.add_attrs(ds.attrs)
+
+

+[docs]
+    def add_variables(self, ds=None):
+        """Add children of variables and coords to this TreeWidgetItem"""
+        if ds is None:
+            ds = self.ds()
+            self.variables.takeChildren()
+            self.coords.takeChildren()
+        else:
+            self.ds = weakref.ref(ds)
+        columns = self.columns
+        variables = self.variables
+        coords = self.coords
+        for vname, variable in six.iteritems(ds.variables):
+            item = QTreeWidgetItem(0)
+            item.setText(0, str(vname))
+            for i, attr in enumerate(columns, 1):
+                if attr == "dims":
+                    item.setText(i, ", ".join(variable.dims))
+                else:
+                    item.setText(
+                        i,
+                        str(
+                            variable.attrs.get(
+                                attr, getattr(variable, attr, "")
+                            )
+                        ),
+                    )
+            if vname in ds.coords:
+                coords.addChild(item)
+            else:
+                variables.addChild(item)
+            if rcParams["content.load_tooltips"]:
+                item.setToolTip(
+                    0, "<pre>" + escape_html(str(variable)) + "</pre>"
+                )
+
+            # Add shape
+            shape_item = QTreeWidgetItem(0)
+            shape_item.setText(0, "shape")
+            shape_item.setText(1, str(variable.shape))
+            item.addChild(shape_item)
+
+            # Add dimensions
+            dims_item = QTreeWidgetItem(0)
+            dims_item.setText(0, "dims")
+            dims_item.setText(1, ", ".join(variable.dims))
+            item.addChild(dims_item)
+
+            # add open plots
+            plots_item = QTreeWidgetItem(0)
+            plots_item.setText(0, "Plots")
+            self.refresh_plots_item(plots_item, vname)
+            item.addChild(plots_item)
+
+            # add variable attribute
+            attrs_item = QTreeWidgetItem(0)
+            attrs_item.setText(0, "Attributes")
+            self.add_attrs(variable.attrs, attrs_item)
+            item.addChild(attrs_item)
+
+            # add variable encoding
+            encoding_item = QTreeWidgetItem(0)
+            encoding_item.setText(0, "Encoded attributes")
+            self.add_attrs(variable.encoding, encoding_item)
+            item.addChild(encoding_item)

+
+
+

+[docs]
+    def get_plots_item(self, item):
+        for child in map(item.child, range(item.childCount())):
+            if child.text(0) == "Plots":
+                return child

+
+
+

+[docs]
+    def refresh_plots_item(self, item, vname, mp=None, sp=None):
+        expand = item.isExpanded()
+        item.takeChildren()
+        try:
+            num = self.ds().psy.num
+        except AttributeError:
+            return
+        if mp is None:
+            mp = gcp(True)
+        if sp is None:
+            sp = gcp()
+        for i in range(len(mp)):
+            sub = mp[i : i + 1]
+            array_info = sub.array_info(ds_description={"arr", "num"})
+            arrs = sub._get_ds_descriptions(array_info).get(num, {})
+            if arrs and any(
+                vname in arr.psy.base_variables for arr in arrs["arr"]
+            ):
+                child = QTreeWidgetItem(0)
+                prefix = "*" if sub[0] in sp else ""
+                text = sub[0].psy._short_info()
+                child.setText(0, prefix + text)
+                child.setToolTip(0, text)
+                item.addChild(child)
+        if expand and item.childCount():
+            item.setExpanded(True)

+
+
+

+[docs]
+    def add_attrs(self, attrs=None, item=None):
+        if attrs is None:
+            attrs = self.ds().attrs
+            self.attrs.takeChildren()
+        if item is None:
+            item = self.attrs
+        for key, val in attrs.items():
+            child = QTreeWidgetItem(0)
+            child.setText(0, key)
+            child.setText(1, str(val))
+            child.setToolTip(1, "{}: {}".format(key, str(val)))
+            item.addChild(child)

+

+
+
+
+

+[docs]
+class DatasetTree(QTreeWidget, DockMixin):
+    """A QTreeWidget showing informations on all datasets in the main project"""
+
+    tooltips = {
+        "Refresh": "Refresh the selected dataset",
+        "Refresh all": "Refresh all datasets",
+        "Add to project": (
+            "Add this variable or a plot of it to the current " "project"
+        ),
+    }
+
+    def __init__(self, *args, **kwargs):
+        super(DatasetTree, self).__init__(*args, **kwargs)
+        self.create_dataset_tree()
+        self.itemExpanded.connect(self.load_variable_desc)
+        self.setContextMenuPolicy(Qt.CustomContextMenu)
+        self.customContextMenuRequested.connect(self.open_menu)
+        Project.oncpchange.connect(self.add_datasets_from_cp)
+        self.hideColumn(1)
+
+

+[docs]
+    @staticmethod
+    def is_variable(item):
+        return re.match(r"variables \(\d+\)", item.parent().text(0))

+
+
+

+[docs]
+    @staticmethod
+    def is_coord(item):
+        return re.match(r"coords\(\d+\)", item.parent().text(0))

+
+
+

+[docs]
+    def load_variable_desc(self, item):
+        parent = item.parent()
+        if (
+            parent is self
+            or parent is None
+            or not (self.is_variable(item) or self.is_coord(item))
+        ):
+            return
+        if self.isColumnHidden(1):
+            self.showColumn(1)
+            self.resizeColumnToContents(0)
+
+        top = item
+        while top.parent() and top.parent() is not self:
+            top = top.parent()
+        ds = top.ds()
+        if ds is None:
+            return
+        desc = escape_html(str(ds.variables[item.text(0)]))
+        item.setToolTip(0, "<pre>" + desc + "</pre>")

+
+
+

+[docs]
+    def create_dataset_tree(self):
+        """Set up the columns and insert the :class:`DatasetTreeItem`
+        instances from the current project"""
+        self.set_columns()
+        self.add_datasets_from_cp(gcp())

+
+
+

+[docs]
+    def set_columns(self, columns=["Value"]):
+        """Set up the columns in the DatasetTree.
+
+        Parameters
+        ----------
+        columns: list of str
+            A list of netCDF attributes that shall be shown in columns"""
+        self.setColumnCount(len(columns) + 1)
+        if columns:
+            self.setHeaderHidden(False)
+            self.setHeaderLabels(["Dataset"] + list(columns))
+        else:
+            self.setHeaderHidden(True)
+        self.attr_columns = columns

+
+
+

+[docs]
+    def expanded_items(self):
+        "Create a mapping from dataset numbers to variables that are expanded."
+        ret = {}
+        for item in map(self.topLevelItem, range(self.topLevelItemCount())):
+            if item.isExpanded() and item.ds() is not None:
+                ds = item.ds()
+                ret[ds.psy.num] = d = {}
+                for child in map(item.child, range(item.childCount())):
+                    if child.childCount() and child.isExpanded():
+                        d[child.text(0)] = variables = []
+                        for vchild in map(
+                            child.child, range(child.childCount())
+                        ):
+                            if vchild.childCount() and vchild.isExpanded():
+                                variables.append(vchild.text(0))
+        return ret

+
+
+

+[docs]
+    def add_datasets_from_cp(self, project=None):
+        """Clear the tree and add the datasets based upon the given `project`
+
+        Parameters
+        ----------
+        project: psyplot.project.Project
+            The project containing the data array. If the project is not a main
+            project, it's main project is used.
+        """
+        if project is None:
+            project = gcp(True)
+            sp_arrs = ArrayList().arrays
+        elif project.is_main:
+            sp_arrs = gcp().arrays
+        else:
+            sp_arrs = project.arrays
+            project = project.main
+
+        expanded_items = self.expanded_items()
+        # remove items from the tree
+        self.clear()
+        for i, ds_desc in six.iteritems(
+            project._get_ds_descriptions(
+                project.array_info(ds_description="all")
+            )
+        ):
+            top_item = DatasetTreeItem(ds_desc["ds"], self.attr_columns, 0)
+            if ds_desc["fname"] is not None and not all(
+                s is None for s in ds_desc["fname"]
+            ):
+                ds_desc["fname"] = ", ".join(
+                    map(osp.basename, safe_list(ds_desc["fname"]))
+                )
+            else:
+                ds_desc["fname"] = None
+            top_item.setText(
+                0,
+                "%s%i: %s"
+                % (
+                    "*"
+                    if any(
+                        any(arr is arr2 for arr2 in sp_arrs)
+                        for arr in ds_desc["arr"]
+                    )
+                    else "",
+                    i,
+                    ds_desc["fname"],
+                ),
+            )
+            for arr in ds_desc["arr"]:
+                arr.psy.onbasechange.connect(self.add_datasets_from_cp)
+            self.addTopLevelItem(top_item)
+        self.expand_items(expanded_items)

+
+
+

+[docs]
+    def expand_items(self, expanded_items):
+        """Expand tree items
+
+        Parameters
+        ----------
+        expanded_items: dict
+            A mapping as returned by the :meth:`expanded_items` method"""
+        for top in map(self.topLevelItem, range(self.topLevelItemCount())):
+            ds = top.ds()
+            if ds.psy.num in expanded_items:
+                self.expandItem(top)
+                d = expanded_items[ds.psy.num]
+                for child in map(top.child, range(top.childCount())):
+                    if child.text(0) in d:
+                        self.expandItem(child)
+                        for vchild in map(
+                            child.child, range(child.childCount())
+                        ):
+                            if vchild.text(0) in d[child.text(0)]:
+                                self.expandItem(vchild)

+
+
+

+[docs]
+    def open_menu(self, pos):
+        menu = QMenu()
+        item = self.itemAt(pos)
+        parent, item_type, vname = self._get_toplevel_item(item)
+        # ---- Refresh the selected item action
+        refresh_action = QAction("Refresh", self)
+        refresh_action.setToolTip(self.tooltips["Refresh"])
+        refresh_action.triggered.connect(lambda: self.refresh_items(parent))
+
+        # ---- Refresh all items action
+        refresh_all_action = QAction("Refresh all", self)
+        refresh_all_action.setToolTip(self.tooltips["Refresh all"])
+        refresh_all_action.triggered.connect(lambda: self.refresh_items())
+
+        # ---- add refresh actions
+        menu.addActions([refresh_action, refresh_all_action])
+
+        # ---- add plot option
+        if item_type == "variable":
+            add2p_action = QAction(f"Add new plot of {vname}", self)
+            add2p_action.setToolTip(self.tooltips["Add to project"])
+            add2p_action.triggered.connect(
+                lambda: self.make_plot(parent.ds(), item.text(0), True)
+            )
+            menu.addSeparator()
+            menu.addAction(add2p_action)
+
+        # ---- show menu
+        menu.exec_(self.mapToGlobal(pos))
+        return menu

+
+
+

+[docs]
+    def refresh_items(self, item=None):
+        if item is not None:
+            item.add_variables()
+        else:
+            for item in map(
+                self.topLevelItem, range(self.topLevelItemCount())
+            ):
+                item.add_variables()

+
+
+

+[docs]
+    def make_plot(self, ds, name, exec_=None):
+        from psyplot_gui.main import mainwindow
+
+        mainwindow.new_plots()
+        mainwindow.plot_creator.switch2ds(ds)
+        mainwindow.plot_creator.insert_array(safe_list(name))
+        if exec_:
+            mainwindow.plot_creator.exec_()

+
+
+    def _get_toplevel_item(self, item):
+        if item is None:
+            parent = None
+        else:
+            parent = item.parent()
+        item_type = None
+        vname = None
+        while parent is not None:
+            if self.is_variable(item):
+                vname = item.text(0)
+                item_type = "variable"
+            elif self.is_coord(item):
+                vname = item.text(0)
+                item_type = "coord"
+            item = item.parent()
+            parent = item.parent()
+        return item, item_type, vname

+
+
+
+

+[docs]
+class FiguresTreeItem(QTreeWidgetItem):
+    """An item displaying the information on a data object in one figure"""
+
+    def __init__(self, ref, *args, **kwargs):
+        """
+        Parameters
+        ----------
+        ref: weakref
+            The weak reference to the array containing the data"""
+        super(FiguresTreeItem, self).__init__(*args, **kwargs)
+        self.arr = ref
+        self.set_text_from_array()
+        ref().psy.onupdate.connect(self.set_text_from_array)
+
+

+[docs]
+    def set_text_from_array(self):
+        """Set the text and tooltop from the
+        :meth:`psyplot.data.InteractiveArray._short_info` and __str__ methods
+        """
+        self.setText(0, self.arr().psy._short_info())
+        if rcParams["content.load_tooltips"]:
+            self.setToolTip(0, str(self.arr()))

+
+
+

+[docs]
+    def disconnect_from_array(self):
+        """Disconect this item from the corresponding array"""
+        arr = self.arr()
+        if arr is not None:
+            arr.psy.onupdate.disconnect(self.set_text_from_array)
+        del self.arr

+

+
+
+
+

+[docs]
+class FiguresTree(QTreeWidget, DockMixin):
+    """A tree widget sorting the arrays by their figure
+
+    This widget uses the current sub and main project to show the open figures
+    """
+
+    def __init__(self, *args, **kwargs):
+        super(FiguresTree, self).__init__(*args, **kwargs)
+        self.setHeaderLabel("Figure")
+        Project.oncpchange.connect(self.add_figures_from_cp)
+        self.add_figures_from_cp(gcp(True))
+
+

+[docs]
+    def add_figures_from_cp(self, project):
+        """Add the items in this tree based upon the figures in the given
+        project"""
+        if project is None or not project.is_main:
+            return
+        for item in map(self.takeTopLevelItem, [0] * self.topLevelItemCount()):
+            for child in item.takeChildren():
+                child.disconnect_from_array()
+        for fig, arrays in six.iteritems(project.figs):
+            item = QTreeWidgetItem(0)
+            item.setText(0, fig.canvas.manager.get_window_title())
+            item.addChildren(
+                [FiguresTreeItem(weakref.ref(arr), 0) for arr in arrays]
+            )
+            self.addTopLevelItem(item)

+

+
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/dataframeeditor.html b/_modules/psyplot_gui/dataframeeditor.html new file mode 100644 index 0000000..f65419d --- /dev/null +++ b/_modules/psyplot_gui/dataframeeditor.html @@ -0,0 +1,1501 @@ + + + + + + psyplot_gui.dataframeeditor — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.dataframeeditor

+"""A widget to display and edit DataFrames"""
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+import os
+import os.path as osp
+from functools import partial
+
+import numpy as np
+import pandas as pd
+import six
+from psyplot.docstring import docstrings
+
+from psyplot_gui.common import (
+    DockMixin,
+    LoadFromConsoleButton,
+    PyErrorMessage,
+    get_icon,
+)
+from psyplot_gui.compat.qtcompat import (
+    QApplication,
+    QCheckBox,
+    QDockWidget,
+    QFileDialog,
+    QHBoxLayout,
+    QHeaderView,
+    QIcon,
+    QLabel,
+    QLineEdit,
+    QMenu,
+    QPushButton,
+    Qt,
+    QTableView,
+    QtCore,
+    QtGui,
+    QToolButton,
+    QVBoxLayout,
+    QWidget,
+    with_qt5,
+)
+
+if six.PY2:
+    try:
+        import CStringIO as io
+    except ImportError:
+        import StringIO as io
+else:
+    import io
+
+
+LARGE_SIZE = int(5e5)
+LARGE_NROWS = int(1e5)
+LARGE_COLS = 60
+
+REAL_NUMBER_TYPES = (float, int, np.int64, np.int32)
+COMPLEX_NUMBER_TYPES = (complex, np.complex64, np.complex128)
+
+_bool_false = ["false", "0"]
+
+
+

+[docs]
+def bool_false_check(value):
+    """
+    Used to convert bool intrance to false since any string in bool('')
+    will return True
+    """
+    if value.lower() in _bool_false:
+        value = ""
+    return value

+
+
+
+

+[docs]
+class DataFrameModel(QtCore.QAbstractTableModel):
+    """DataFrame Table Model"""
+
+    ROWS_TO_LOAD = 500
+    COLS_TO_LOAD = 40
+
+    _format = "%0.6g"
+
+    @docstrings.get_sections(base="DataFrameModel")
+    @docstrings.dedent
+    def __init__(
+        self, df, parent=None, index_editable=True, dtypes_changeable=True
+    ):
+        """
+        Parameters
+        ----------
+        df: pandas.DataFrame
+            The data frame that will be shown by this :class:`DataFrameModel`
+            instance
+        parent: DataFrameEditor
+            The editor for the table
+        index_editable: bool
+            True if the index should be modifiable by the user
+        dtypes_changeable: bool
+            True, if the data types should be modifiable by the user
+        """
+        QtCore.QAbstractTableModel.__init__(self)
+        self._parent = parent
+        self.df = df
+        self.df_index = self.df.index.tolist()
+        self.df_header = self.df.columns.tolist()
+        self.total_rows = self.df.shape[0]
+        self.total_cols = self.df.shape[1]
+        size = self.total_rows * self.total_cols
+        self.index_editable = index_editable
+        self.dtypes_changeable = dtypes_changeable
+
+        # Use paging when the total size, number of rows or number of
+        # columns is too large
+        if size > LARGE_SIZE:
+            self.rows_loaded = self.ROWS_TO_LOAD
+            self.cols_loaded = self.COLS_TO_LOAD
+        else:
+            if self.total_rows > LARGE_NROWS:
+                self.rows_loaded = self.ROWS_TO_LOAD
+            else:
+                self.rows_loaded = self.total_rows
+            if self.total_cols > LARGE_COLS:
+                self.cols_loaded = self.COLS_TO_LOAD
+            else:
+                self.cols_loaded = self.total_cols
+
+

+[docs]
+    def get_format(self):
+        """Return current format"""
+        # Avoid accessing the private attribute _format from outside
+        return self._format

+
+
+

+[docs]
+    def set_format(self, format):
+        """Change display format"""
+        self._format = format
+        self.reset()

+
+
+

+[docs]
+    def bgcolor(self, state):
+        """Toggle backgroundcolor"""
+        self.bgcolor_enabled = state > 0
+        self.reset()

+
+
+

+[docs]
+    def headerData(self, section, orientation, role=Qt.DisplayRole):
+        """Set header data"""
+        if role != Qt.DisplayRole:
+            return None
+
+        if orientation == Qt.Horizontal:
+            if section == 0:
+                return six.text_type("Index")
+            elif isinstance(self.df_header[section - 1], six.string_types):
+                header = self.df_header[section - 1]
+                return six.text_type(header)
+            else:
+                return six.text_type(self.df_header[section - 1])
+        else:
+            return None

+
+
+

+[docs]
+    def get_value(self, row, column):
+        """Returns the value of the DataFrame"""
+        # To increase the performance iat is used but that requires error
+        # handling, so fallback uses iloc
+        try:
+            value = self.df.iat[row, column]
+        except AttributeError:
+            value = self.df.iloc[row, column]
+        return value

+
+
+

+[docs]
+    def data(self, index, role=Qt.DisplayRole):
+        """Cell content"""
+        if not index.isValid():
+            return None
+        if role == Qt.DisplayRole or role == Qt.EditRole:
+            column = index.column()
+            row = index.row()
+            if column == 0:
+                return six.text_type(self.df_index[row])
+            else:
+                value = self.get_value(row, column - 1)
+                if isinstance(value, float):
+                    try:
+                        return self._format % value
+                    except (ValueError, TypeError):
+                        # may happen if format = '%d' and value = NaN;
+                        # see issue 4139
+                        return DataFrameModel._format % value
+                else:
+                    return six.text_type(value)

+
+
+

+[docs]
+    def sort(
+        self, column, order=Qt.AscendingOrder, return_check=False, report=True
+    ):
+        """Overriding sort method"""
+        try:
+            ascending = order == Qt.AscendingOrder
+            if column > 0:
+                try:
+                    self.df.sort_values(
+                        by=self.df.columns[column - 1],
+                        ascending=ascending,
+                        inplace=True,
+                        kind="mergesort",
+                    )
+                except AttributeError:
+                    # for pandas version < 0.17
+                    self.df.sort(
+                        columns=self.df.columns[column - 1],
+                        ascending=ascending,
+                        inplace=True,
+                        kind="mergesort",
+                    )
+                self.update_df_index()
+            else:
+                self.df.sort_index(inplace=True, ascending=ascending)
+                self.update_df_index()
+        except TypeError:
+            if report:
+                self._parent.error_msg.showTraceback(
+                    "<b>Failed to sort column!</b>"
+                )
+            return False if return_check else None
+        self.reset()
+        return True if return_check else None

+
+
+

+[docs]
+    def flags(self, index):
+        """Set flags"""
+        if index.column() == 0 and not self.index_editable:
+            return Qt.ItemIsEnabled | Qt.ItemIsSelectable
+        return Qt.ItemFlags(
+            QtCore.QAbstractTableModel.flags(self, index) | Qt.ItemIsEditable
+        )

+
+
+

+[docs]
+    def setData(self, index, value, role=Qt.EditRole, change_type=None):
+        """Cell content change"""
+        column = index.column()
+        row = index.row()
+
+        if change_type is not None:
+            if not self.dtypes_changeable:
+                return False
+            try:
+                value = current_value = self.data(index, role=Qt.DisplayRole)
+                if change_type is bool:
+                    value = bool_false_check(value)
+                value = np.asarray(change_type(value))  # to make sure it works
+                icol = column - 1
+                self.df.iloc[:, icol] = self.df.iloc[:, icol].astype(
+                    change_type
+                )
+            except ValueError:
+                self.df.iloc[row, icol] = self.df.iloc[row, icol].astype(
+                    object
+                )
+        else:
+            current_value = (
+                self.get_value(row, column - 1)
+                if column
+                else self.df.index[row]
+            )
+            if isinstance(current_value, bool):
+                value = bool_false_check(value)
+            supported_types = (
+                (bool,) + REAL_NUMBER_TYPES + COMPLEX_NUMBER_TYPES
+            )
+            if isinstance(current_value, supported_types) or isinstance(
+                current_value, six.string_types
+            ):
+                if column:
+                    try:
+                        self.df.iloc[
+                            row, column - 1
+                        ] = current_value.__class__(value)
+                    except ValueError:
+                        self._parent.error_msg.showTraceback(
+                            "<b>Failed to set value with %r!</b>" % value
+                        )
+                        return False
+                elif self.index_editable:
+                    index = self.df.index.values.copy()
+                    try:
+                        index[row] = value
+                    except ValueError:
+                        self._parent.error_msg.showTraceback(
+                            "<b>Failed to set value with %r!</b>" % value
+                        )
+                        return False
+                    self.df.index = pd.Index(index, name=self.df.index.name)
+                    self.update_df_index()
+                else:
+                    return False
+            else:
+                self._parent.error_msg.showTraceback(
+                    "<b>The type of the cell is not a supported type" "</b>"
+                )
+                return False
+        self._parent.cell_edited.emit(row, column, current_value, value)
+        return True

+
+
+

+[docs]
+    def rowCount(self, index=QtCore.QModelIndex()):
+        """DataFrame row number"""
+        if self.total_rows <= self.rows_loaded:
+            return self.total_rows
+        else:
+            return self.rows_loaded

+
+
+

+[docs]
+    def can_fetch_more(self, rows=False, columns=False):
+        if rows:
+            if self.total_rows > self.rows_loaded:
+                return True
+            else:
+                return False
+        if columns:
+            if self.total_cols > self.cols_loaded:
+                return True
+            else:
+                return False

+
+
+

+[docs]
+    def fetch_more(self, rows=False, columns=False):
+        if self.can_fetch_more(rows=rows):
+            reminder = self.total_rows - self.rows_loaded
+            items_to_fetch = min(reminder, self.ROWS_TO_LOAD)
+            self.beginInsertRows(
+                QtCore.QModelIndex(),
+                self.rows_loaded,
+                self.rows_loaded + items_to_fetch - 1,
+            )
+            self.rows_loaded += items_to_fetch
+            self.endInsertRows()
+        if self.can_fetch_more(columns=columns):
+            reminder = self.total_cols - self.cols_loaded
+            items_to_fetch = min(reminder, self.COLS_TO_LOAD)
+            self.beginInsertColumns(
+                QtCore.QModelIndex(),
+                self.cols_loaded,
+                self.cols_loaded + items_to_fetch - 1,
+            )
+            self.cols_loaded += items_to_fetch
+            self.endInsertColumns()

+
+
+

+[docs]
+    def columnCount(self, index=QtCore.QModelIndex()):
+        """DataFrame column number"""
+        # This is done to implement series
+        if len(self.df.shape) == 1:
+            return 2
+        elif self.total_cols <= self.cols_loaded:
+            return self.total_cols + 1
+        else:
+            return self.cols_loaded + 1

+
+
+

+[docs]
+    def update_df_index(self):
+        """ "Update the DataFrame index"""
+        self.df_index = self.df.index.tolist()

+
+
+

+[docs]
+    def reset(self):
+        self.beginResetModel()
+        self.endResetModel()

+
+
+

+[docs]
+    def insertRow(self, irow):
+        """Insert one row into the :attr:`df`
+
+        Parameters
+        ----------
+        irow: int
+            The row index. If iRow is equal to the length of the
+            :attr:`df`, the new row will be appended."""
+        # reimplemented to fall back to the :meth:`insertRows` method
+        self.insertRows(irow)

+
+
+

+[docs]
+    def insertRows(self, irow, nrows=1):
+        """Insert a row into the :attr:`df`
+
+        Parameters
+        ----------
+        irow: int
+            The row index. If `irow` is equal to the length of the
+            :attr:`df`, the rows will be appended.
+        nrows: int
+            The number of rows to insert"""
+        df = self.df
+        if not irow:
+            if not len(df):
+                idx = 0
+            else:
+                idx = df.index.values[0]
+        else:
+            try:
+                idx = df.index.values[irow - 1 : irow + 1].mean()
+            except TypeError:
+                idx = df.index.values[min(irow, len(df) - 1)]
+            else:
+                idx = df.index.values[min(irow, len(df) - 1)].__class__(idx)
+        # reset the index to sort it correctly
+        idx_name = df.index.name
+        dtype = df.index.dtype
+        df.reset_index(inplace=True)
+        new_idx_name = df.columns[0]
+        current_len = len(df)
+        for i in range(nrows):
+            df.loc[current_len + i, new_idx_name] = idx
+        df[new_idx_name] = df[new_idx_name].astype(dtype)
+        if irow < current_len:
+            changed = df.index.values.astype(float)
+            changed[current_len:] = irow - 0.5
+            df.index = changed
+            df.sort_index(inplace=True)
+        df.set_index(new_idx_name, inplace=True, drop=True)
+        df.index.name = idx_name
+        self.update_df_index()
+        self.beginInsertRows(
+            QtCore.QModelIndex(),
+            self.rows_loaded,
+            self.rows_loaded + nrows - 1,
+        )
+        self.total_rows += nrows
+        self.rows_loaded += nrows
+        self.endInsertRows()
+        self._parent.rows_inserted.emit(irow, nrows)

+

+
+
+
+

+[docs]
+class FrozenTableView(QTableView):
+    """This class implements a table with its first column frozen
+    For more information please see:
+    http://doc.qt.io/qt-5/qtwidgets-itemviews-frozencolumn-example.html"""
+
+    def __init__(self, parent):
+        """Constructor."""
+        QTableView.__init__(self, parent)
+        self.parent = parent
+        self.setModel(parent.model())
+        self.setFocusPolicy(Qt.NoFocus)
+        self.verticalHeader().hide()
+        if with_qt5:
+            self.horizontalHeader().setSectionResizeMode(QHeaderView.Fixed)
+        else:
+            self.horizontalHeader().setResizeMode(QHeaderView.Fixed)
+
+        parent.viewport().stackUnder(self)
+
+        self.setSelectionModel(parent.selectionModel())
+        for col in range(1, parent.model().columnCount()):
+            self.setColumnHidden(col, True)
+
+        self.setColumnWidth(0, parent.columnWidth(0))
+        self.setHorizontalScrollBarPolicy(Qt.ScrollBarAlwaysOff)
+        self.setVerticalScrollBarPolicy(Qt.ScrollBarAlwaysOff)
+        self.show()
+        self.setVerticalScrollMode(QTableView.ScrollPerPixel)
+
+        self.verticalScrollBar().valueChanged.connect(
+            parent.verticalScrollBar().setValue
+        )
+        parent.verticalScrollBar().valueChanged.connect(
+            self.verticalScrollBar().setValue
+        )
+
+

+[docs]
+    def update_geometry(self):
+        """Update the frozen column size when an update occurs in its parent
+        table"""
+        self.setGeometry(
+            self.parent.verticalHeader().width() + self.parent.frameWidth(),
+            self.parent.frameWidth(),
+            self.parent.columnWidth(0),
+            self.parent.viewport().height()
+            + self.parent.horizontalHeader().height(),
+        )

+
+
+

+[docs]
+    def contextMenuEvent(self, event):
+        """Show the context Menu
+
+        Reimplemented to show the use the contextMenuEvent of the parent"""
+        self.parent.contextMenuEvent(event)

+

+
+
+
+

+[docs]
+class DataFrameView(QTableView):
+    """Data Frame view class"""
+
+    @property
+    def filled(self):
+        """True if the table is filled with content"""
+        return bool(self.model().rows_loaded)
+
+    @docstrings.dedent
+    def __init__(self, df, parent, *args, **kwargs):
+        """
+        Parameters
+        ----------
+        %(DataFrameModel.parameters)s
+        """
+        QTableView.__init__(self, parent)
+        model = DataFrameModel(df, parent, *args, **kwargs)
+        self.setModel(model)
+        self.menu = self.setup_menu()
+
+        self.frozen_table_view = FrozenTableView(self)
+        self.frozen_table_view.update_geometry()
+
+        self.setHorizontalScrollMode(1)
+        self.setVerticalScrollMode(1)
+
+        self.horizontalHeader().sectionResized.connect(
+            self.update_section_width
+        )
+        self.verticalHeader().sectionResized.connect(
+            self.update_section_height
+        )
+
+        self.sort_old = [None]
+        self.header_class = self.horizontalHeader()
+        self.header_class.sectionClicked.connect(self.sortByColumn)
+        self.frozen_table_view.horizontalHeader().sectionClicked.connect(
+            self.sortByColumn
+        )
+        self.horizontalScrollBar().valueChanged.connect(
+            lambda val: self.load_more_data(val, columns=True)
+        )
+        self.verticalScrollBar().valueChanged.connect(
+            lambda val: self.load_more_data(val, rows=True)
+        )
+
+

+[docs]
+    def update_section_width(self, logical_index, old_size, new_size):
+        """Update the horizontal width of the frozen column when a
+        change takes place in the first column of the table"""
+        if logical_index == 0:
+            self.frozen_table_view.setColumnWidth(0, new_size)
+            self.frozen_table_view.update_geometry()

+
+
+

+[docs]
+    def update_section_height(self, logical_index, old_size, new_size):
+        """Update the vertical width of the frozen column when a
+        change takes place on any of the rows"""
+        self.frozen_table_view.setRowHeight(logical_index, new_size)

+
+
+

+[docs]
+    def resizeEvent(self, event):
+        """Update the frozen column dimensions.
+
+        Updates takes place when the enclosing window of this
+        table reports a dimension change
+        """
+        QTableView.resizeEvent(self, event)
+        self.frozen_table_view.update_geometry()

+
+
+

+[docs]
+    def moveCursor(self, cursor_action, modifiers):
+        """Update the table position.
+
+        Updates the position along with the frozen column
+        when the cursor (selector) changes its position
+        """
+        current = QTableView.moveCursor(self, cursor_action, modifiers)
+
+        col_width = self.columnWidth(0) + self.columnWidth(1)
+        topleft_x = self.visualRect(current).topLeft().x()
+
+        overflow = self.MoveLeft and current.column() > 1
+        overflow = overflow and topleft_x < col_width
+
+        if cursor_action == overflow:
+            new_value = (
+                self.horizontalScrollBar().value() + topleft_x - col_width
+            )
+            self.horizontalScrollBar().setValue(new_value)
+        return current

+
+
+

+[docs]
+    def scrollTo(self, index, hint):
+        """Scroll the table.
+
+        It is necessary to ensure that the item at index is visible.
+        The view will try to position the item according to the
+        given hint. This method does not takes effect only if
+        the frozen column is scrolled.
+        """
+        if index.column() > 1:
+            QTableView.scrollTo(self, index, hint)

+
+
+

+[docs]
+    def load_more_data(self, value, rows=False, columns=False):
+        if rows and value == self.verticalScrollBar().maximum():
+            self.model().fetch_more(rows=rows)
+        if columns and value == self.horizontalScrollBar().maximum():
+            self.model().fetch_more(columns=columns)

+
+
+

+[docs]
+    def sortByColumn(self, index):
+        """Implement a Column sort"""
+        frozen_header = self.frozen_table_view.horizontalHeader()
+        if not self.isSortingEnabled():
+            self.header_class.setSortIndicatorShown(False)
+            frozen_header.setSortIndicatorShown(False)
+            return
+        if self.sort_old == [None]:
+            self.header_class.setSortIndicatorShown(True)
+        frozen_header.setSortIndicatorShown(index == 0)
+        if index == 0:
+            sort_order = frozen_header.sortIndicatorOrder()
+        else:
+            sort_order = self.header_class.sortIndicatorOrder()
+        if not self.model().sort(index, sort_order, True):
+            if len(self.sort_old) != 2:
+                self.header_class.setSortIndicatorShown(False)
+                frozen_header.setSortIndicatorShown(False)
+            else:
+                self.header_class.setSortIndicator(
+                    self.sort_old[0], self.sort_old[1]
+                )
+                if index == 0:
+                    frozen_header.setSortIndicator(
+                        self.sort_old[0], self.sort_old[1]
+                    )
+            return
+        self.sort_old = [index, self.header_class.sortIndicatorOrder()]

+
+
+

+[docs]
+    def change_type(self, func):
+        """A function that changes types of cells"""
+        model = self.model()
+        index_list = self.selectedIndexes()
+        for i in index_list:
+            model.setData(i, "", change_type=func)

+
+
+

+[docs]
+    def insert_row_above_selection(self):
+        """Insert rows above the selection
+
+        The number of rows inserted depends on the number of selected rows"""
+        rows, cols = self._selected_rows_and_cols()
+        model = self.model()
+        if not model.rowCount():
+            model.insertRows(0, 1)
+        elif not rows and not cols:
+            return
+        else:
+            min_row = min(rows)
+            nrows = len(set(rows))
+            model.insertRows(min_row, nrows)

+
+
+

+[docs]
+    def insert_row_below_selection(self):
+        """Insert rows below the selection
+
+        The number of rows inserted depends on the number of selected rows"""
+        rows, cols = self._selected_rows_and_cols()
+        model = self.model()
+        if not model.rowCount():
+            model.insertRows(0, 1)
+        elif not rows and not cols:
+            return
+        else:
+            max_row = max(rows)
+            nrows = len(set(rows))
+            model.insertRows(max_row + 1, nrows)

+
+
+    def _selected_rows_and_cols(self):
+        index_list = self.selectedIndexes()
+        if not index_list:
+            return [], []
+        return list(zip(*[(i.row(), i.column()) for i in index_list]))
+
+    docstrings.delete_params("DataFrameModel.parameters", "parent")
+
+

+[docs]
+    @docstrings.dedent
+    def set_df(self, df, *args, **kwargs):
+        """
+        Set the :class:`~pandas.DataFrame` for this table
+
+        Parameters
+        ----------
+        %(DataFrameModel.parameters.no_parent)s
+        """
+        model = DataFrameModel(df, self.parent(), *args, **kwargs)
+        self.setModel(model)
+        self.frozen_table_view.setModel(model)

+
+
+

+[docs]
+    def reset_model(self):
+        self.model().reset()

+
+
+

+[docs]
+    def contextMenuEvent(self, event):
+        """Reimplement Qt method"""
+        model = self.model()
+        for a in self.dtype_actions.values():
+            a.setEnabled(model.dtypes_changeable)
+        nrows = max(len(set(self._selected_rows_and_cols()[0])), 1)
+        self.insert_row_above_action.setText(
+            "Insert %i row%s above" % (nrows, "s" if nrows - 1 else "")
+        )
+        self.insert_row_below_action.setText(
+            "Insert %i row%s below" % (nrows, "s" if nrows - 1 else "")
+        )
+        self.insert_row_above_action.setEnabled(model.index_editable)
+        self.insert_row_below_action.setEnabled(model.index_editable)
+        self.menu.popup(event.globalPos())
+        event.accept()

+
+
+

+[docs]
+    def setup_menu(self):
+        """Setup context menu"""
+        menu = QMenu(self)
+        menu.addAction("Copy", self.copy, QtGui.QKeySequence.Copy)
+        menu.addSeparator()
+        functions = (
+            ("To bool", bool),
+            ("To complex", complex),
+            ("To int", int),
+            ("To float", float),
+            ("To str", str),
+        )
+        self.dtype_actions = {
+            name: menu.addAction(name, partial(self.change_type, func))
+            for name, func in functions
+        }
+        menu.addSeparator()
+        self.insert_row_above_action = menu.addAction(
+            "Insert rows above", self.insert_row_above_selection
+        )
+        self.insert_row_below_action = menu.addAction(
+            "Insert rows below", self.insert_row_below_selection
+        )
+        menu.addSeparator()
+        self.set_index_action = menu.addAction(
+            "Set as index", partial(self.set_index, False)
+        )
+        self.append_index_action = menu.addAction(
+            "Append to as index", partial(self.set_index, True)
+        )
+        return menu

+
+
+

+[docs]
+    def set_index(self, append=False):
+        """Set the index from the selected columns"""
+        model = self.model()
+        df = model.df
+        args = [model.dtypes_changeable, model.index_editable]
+        cols = np.unique(self._selected_rows_and_cols()[1])
+        if not append:
+            cols += len(df.index.names) - 1
+            df.reset_index(inplace=True)
+        else:
+            cols -= 1
+        cols = cols.tolist()
+        if len(cols) == 1:
+            df.set_index(df.columns[cols[0]], inplace=True, append=append)
+        else:
+            df.set_index(
+                df.columns[cols].tolist(), inplace=True, append=append
+            )
+        self.set_df(df, *args)

+
+
+

+[docs]
+    def copy(self):
+        """Copy text to clipboard"""
+        rows, cols = self._selected_rows_and_cols()
+        if not rows and not cols:
+            return
+        row_min, row_max = min(rows), max(rows)
+        col_min, col_max = min(cols), max(cols)
+        index = header = False
+        if col_min == 0:
+            col_min = 1
+            index = True
+        df = self.model().df
+        if col_max == 0:  # To copy indices
+            contents = "\n".join(
+                map(str, df.index.tolist()[slice(row_min, row_max + 1)])
+            )
+        else:  # To copy DataFrame
+            if (col_min == 0 or col_min == 1) and (df.shape[1] == col_max):
+                header = True
+            obj = df.iloc[
+                slice(row_min, row_max + 1), slice(col_min - 1, col_max)
+            ]
+            output = io.StringIO()
+            obj.to_csv(output, sep="\t", index=index, header=header)
+            if not six.PY2:
+                contents = output.getvalue()
+            else:
+                contents = output.getvalue().decode("utf-8")
+            output.close()
+        clipboard = QApplication.clipboard()
+        clipboard.setText(contents)

+

+
+
+
+

+[docs]
+class DataFrameDock(QDockWidget):
+    """The QDockWidget for the :class:`DataFrameEditor`"""
+
+

+[docs]
+    def close(self):
+        """
+        Reimplemented to remove the dock widget from the mainwindow when closed
+        """
+        mainwindow = self.parent()
+        try:
+            mainwindow.dataframeeditors.remove(self.widget())
+        except Exception:
+            pass
+        try:
+            mainwindow.removeDockWidget(self)
+        except Exception:
+            pass
+        if getattr(self.widget(), "_view_action", None) is not None:
+            mainwindow.dataframe_menu.removeAction(self.widget()._view_action)
+        return super(DataFrameDock, self).close()

+

+
+
+
+

+[docs]
+class DataFrameEditor(DockMixin, QWidget):
+    """An editor for data frames"""
+
+    dock_cls = DataFrameDock
+
+    #: A signal that is emitted, if the table is cleared
+    cleared = QtCore.pyqtSignal()
+
+    #: A signal that is emitted when a cell has been changed. The argument
+    #: is a tuple of two integers and one float:
+    #: the row index, the column index and the new value
+    cell_edited = QtCore.pyqtSignal(int, int, object, object)
+
+    #: A signal that is emitted, if rows have been inserted into the dataframe.
+    #: The first value is the integer of the (original) position of the row,
+    #: the second one is the number of rows
+    rows_inserted = QtCore.pyqtSignal(int, int)
+
+    @property
+    def hidden(self):
+        return not self.table.filled
+
+    def __init__(self, *args, **kwargs):
+        super(DataFrameEditor, self).__init__(*args, **kwargs)
+        self.error_msg = PyErrorMessage(self)
+
+        # Label for displaying the DataFrame size
+        self.lbl_size = QLabel()
+
+        # A Checkbox for enabling and disabling the editability of the index
+        self.cb_index_editable = QCheckBox("Index editable")
+
+        # A checkbox for enabling and disabling the change of data types
+        self.cb_dtypes_changeable = QCheckBox("Datatypes changeable")
+
+        # A checkbox for enabling and disabling sorting
+        self.cb_enable_sort = QCheckBox("Enable sorting")
+
+        # A button to open a dataframe from the file
+        self.btn_open_df = QToolButton(parent=self)
+        self.btn_open_df.setIcon(QIcon(get_icon("run_arrow.png")))
+        self.btn_open_df.setToolTip("Open a DataFrame from your disk")
+
+        self.btn_from_console = LoadFromConsoleButton(pd.DataFrame)
+        self.btn_from_console.setToolTip("Show a DataFrame from the console")
+
+        # The table to display the DataFrame
+        self.table = DataFrameView(pd.DataFrame(), self)
+
+        # format line edit
+        self.format_editor = QLineEdit()
+        self.format_editor.setText(self.table.model()._format)
+
+        # format update button
+        self.btn_change_format = QPushButton("Update")
+        self.btn_change_format.setEnabled(False)
+
+        # table clearing button
+        self.btn_clear = QPushButton("Clear")
+        self.btn_clear.setToolTip(
+            "Clear the table and disconnect from the DataFrame"
+        )
+
+        # refresh button
+        self.btn_refresh = QToolButton()
+        self.btn_refresh.setIcon(QIcon(get_icon("refresh.png")))
+        self.btn_refresh.setToolTip("Refresh the table")
+
+        # close button
+        self.btn_close = QPushButton("Close")
+        self.btn_close.setToolTip("Close this widget permanentely")
+
+        # ---------------------------------------------------------------------
+        # ------------------------ layout --------------------------------
+        # ---------------------------------------------------------------------
+        vbox = QVBoxLayout()
+        self.top_hbox = hbox = QHBoxLayout()
+        hbox.addWidget(self.cb_index_editable)
+        hbox.addWidget(self.cb_dtypes_changeable)
+        hbox.addWidget(self.cb_enable_sort)
+        hbox.addWidget(self.lbl_size)
+        hbox.addStretch(0)
+        hbox.addWidget(self.btn_open_df)
+        hbox.addWidget(self.btn_from_console)
+        vbox.addLayout(hbox)
+        vbox.addWidget(self.table)
+        self.bottom_hbox = hbox = QHBoxLayout()
+        hbox.addWidget(self.format_editor)
+        hbox.addWidget(self.btn_change_format)
+        hbox.addStretch(0)
+        hbox.addWidget(self.btn_clear)
+        hbox.addWidget(self.btn_close)
+        hbox.addWidget(self.btn_refresh)
+        vbox.addLayout(hbox)
+        self.setLayout(vbox)
+
+        # ---------------------------------------------------------------------
+        # ------------------------ Connections --------------------------------
+        # ---------------------------------------------------------------------
+        self.cb_dtypes_changeable.stateChanged.connect(
+            self.set_dtypes_changeable
+        )
+        self.cb_index_editable.stateChanged.connect(self.set_index_editable)
+        self.btn_from_console.object_loaded.connect(self._open_ds_from_console)
+        self.rows_inserted.connect(lambda i, n: self.set_lbl_size_text())
+        self.format_editor.textChanged.connect(self.toggle_fmt_button)
+        self.btn_change_format.clicked.connect(self.update_format)
+        self.btn_clear.clicked.connect(self.clear_table)
+        self.btn_close.clicked.connect(self.clear_table)
+        self.btn_close.clicked.connect(lambda: self.close())
+        self.btn_refresh.clicked.connect(self.table.reset_model)
+        self.btn_open_df.clicked.connect(self._open_dataframe)
+        self.table.set_index_action.triggered.connect(
+            self.update_index_editable
+        )
+        self.table.append_index_action.triggered.connect(
+            self.update_index_editable
+        )
+        self.cb_enable_sort.stateChanged.connect(self.table.setSortingEnabled)
+
+

+[docs]
+    def update_index_editable(self):
+        model = self.table.model()
+        if len(model.df.index.names) > 1:
+            model.index_editable = False
+            self.cb_index_editable.setEnabled(False)
+        self.cb_index_editable.setChecked(model.index_editable)

+
+
+

+[docs]
+    def set_lbl_size_text(self, nrows=None, ncols=None):
+        """Set the text of the :attr:`lbl_size` label to display the size"""
+        model = self.table.model()
+        nrows = nrows if nrows is not None else model.rowCount()
+        ncols = ncols if ncols is not None else model.columnCount()
+        if not nrows and not ncols:
+            self.lbl_size.setText("")
+        else:
+            self.lbl_size.setText("Rows: %i, Columns: %i" % (nrows, ncols))

+
+
+

+[docs]
+    def clear_table(self):
+        """Clear the table and emit the :attr:`cleared` signal"""
+        df = pd.DataFrame()
+        self.set_df(df, show=False)

+
+
+    def _open_ds_from_console(self, oname, df):
+        self.set_df(df)
+
+

+[docs]
+    @docstrings.dedent
+    def set_df(self, df, *args, **kwargs):
+        """
+        Fill the table from a :class:`~pandas.DataFrame`
+
+        Parameters
+        ----------
+        %(DataFrameModel.parameters.no_parent)s
+        show: bool
+            If True (default), show and raise_ the editor
+        """
+        show = kwargs.pop("show", True)
+        self.table.set_df(df, *args, **kwargs)
+        self.set_lbl_size_text(*df.shape)
+        model = self.table.model()
+        self.cb_dtypes_changeable.setChecked(model.dtypes_changeable)
+
+        if len(model.df.index.names) > 1:
+            model.index_editable = False
+            self.cb_index_editable.setEnabled(False)
+        else:
+            self.cb_index_editable.setEnabled(True)
+        self.cb_index_editable.setChecked(model.index_editable)
+        self.cleared.emit()
+        if show:
+            self.show_plugin()
+            self.dock.raise_()

+
+
+

+[docs]
+    def set_index_editable(self, state):
+        """Set the :attr:`DataFrameModel.index_editable` attribute"""
+        self.table.model().index_editable = state == Qt.Checked

+
+
+

+[docs]
+    def set_dtypes_changeable(self, state):
+        """Set the :attr:`DataFrameModel.dtypes_changeable` attribute"""
+        self.table.model().dtypes_changeable = state == Qt.Checked

+
+
+

+[docs]
+    def toggle_fmt_button(self, text):
+        try:
+            text % 1.1
+        except (TypeError, ValueError):
+            self.btn_change_format.setEnabled(False)
+        else:
+            self.btn_change_format.setEnabled(
+                text.strip() != self.table.model()._format
+            )

+
+
+

+[docs]
+    def update_format(self):
+        """Update the format of the table"""
+        self.table.model().set_format(self.format_editor.text().strip())

+
+
+

+[docs]
+    def to_dock(self, main, *args, **kwargs):
+        connect = self.dock is None
+        super(DataFrameEditor, self).to_dock(main, *args, **kwargs)
+        if connect:
+            self.dock.toggleViewAction().triggered.connect(self.maybe_tabify)

+
+
+

+[docs]
+    def maybe_tabify(self):
+        main = self.dock.parent()
+        if self.is_shown and main.dockWidgetArea(
+            main.help_explorer.dock
+        ) == main.dockWidgetArea(self.dock):
+            main.tabifyDockWidget(main.help_explorer.dock, self.dock)

+
+
+    def _open_dataframe(self):
+        self.open_dataframe()
+
+

+[docs]
+    def open_dataframe(self, fname=None, *args, **kwargs):
+        """Opens a file dialog and the dataset that has been inserted"""
+        if fname is None:
+            fname = QFileDialog.getOpenFileName(
+                self,
+                "Open dataset",
+                os.getcwd(),
+                "Comma separated files (*.csv);;"
+                "Excel files (*.xls *.xlsx);;"
+                "JSON files (*.json);;"
+                "All files (*)",
+            )
+            if with_qt5:  # the filter is passed as well
+                fname = fname[0]
+        if isinstance(fname, pd.DataFrame):
+            self.set_df(fname)
+        elif not fname:
+            return
+        else:
+            ext = osp.splitext(fname)[1]
+            open_funcs = {
+                ".xls": pd.read_excel,
+                ".xlsx": pd.read_excel,
+                ".json": pd.read_json,
+                ".tab": partial(pd.read_csv, delimiter="\t"),
+                ".dat": partial(pd.read_csv, delim_whitespace=True),
+            }
+            open_func = open_funcs.get(ext, pd.read_csv)
+            try:
+                df = open_func(fname)
+            except Exception:
+                self.error_msg.showTraceback(
+                    "<b>Could not open DataFrame %s with %s</b>"
+                    % (fname, open_func)
+                )
+                return
+            self.set_df(df)

+
+
+

+[docs]
+    def close(self, *args, **kwargs):
+        if self.dock is not None:
+            self.dock.close(*args, **kwargs)  # removes the dock window
+            del self.dock
+        return super(DataFrameEditor, self).close(*args, **kwargs)

+

+
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/dependencies.html b/_modules/psyplot_gui/dependencies.html new file mode 100644 index 0000000..ee194b9 --- /dev/null +++ b/_modules/psyplot_gui/dependencies.html @@ -0,0 +1,515 @@ + + + + + + psyplot_gui.dependencies — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.dependencies

+"""Dependencies widget of the psyplot package
+
+This module defines the :class:`DependenciesWidget` that shows the versions of
+of psyplot, psyplot_gui, psyplot plugins and their requirements"""
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+from psyplot.docstring import docstrings
+
+from psyplot_gui.compat.qtcompat import (
+    QAbstractItemView,
+    QAction,
+    QApplication,
+    QDialog,
+    QDialogButtonBox,
+    QHBoxLayout,
+    QLabel,
+    QMenu,
+    QMessageBox,
+    QPushButton,
+    Qt,
+    QtCore,
+    QTreeWidget,
+    QTreeWidgetItem,
+    QVBoxLayout,
+)
+
+
+

+[docs]
+class DependenciesTree(QTreeWidget):
+    """A tree widget to display dependencies
+
+    This widget uses a dictionary as created through the
+    :func:`psyplot.get_versions` function to display the requirements and
+    versions."""
+
+    @docstrings.get_sections(base="DependenciesTree")
+    def __init__(self, versions, *args, **kwargs):
+        """
+        Parameters
+        ----------
+        versions: dict
+            The dictionary that contains the version information
+
+        See Also
+        --------
+        psyplot.get_versions
+        """
+        super(DependenciesTree, self).__init__(*args, **kwargs)
+        self.resizeColumnToContents(0)
+        self.setColumnCount(2)
+        self.setHeaderLabels(["Package", "installed version"])
+        self.add_dependencies(versions)
+        self.expandAll()
+        self.resizeColumnToContents(0)
+        self.setContextMenuPolicy(Qt.CustomContextMenu)
+        self.customContextMenuRequested.connect(self.open_menu)
+
+

+[docs]
+    @docstrings.dedent
+    def add_dependencies(self, versions, parent=None):
+        """
+        Add the version informations to the tree
+
+        This method creates an QTreeWidgetItem for each package in `versions`
+        and adds it to this tree.
+
+        Parameters
+        ----------
+        %(DependenciesTree.parameters)s
+        parent: QTreeWidgetItem
+            The parent of the newly created items for the packages in
+            `versions`. If None, the newly created items are inserted as
+            top level items into the tree
+        """
+        for pkg, pkg_d in versions.items():
+            new_item = QTreeWidgetItem(0)
+            new_item.setText(0, pkg)
+            if isinstance(pkg_d, dict):
+                new_item.setText(1, pkg_d["version"])
+            else:
+                new_item.setText(1, pkg_d)
+            if parent is None:
+                self.addTopLevelItem(new_item)
+            else:
+                parent.addChild(new_item)
+            if "requirements" in pkg_d:
+                self.add_dependencies(pkg_d["requirements"], new_item)

+
+
+

+[docs]
+    def open_menu(self, position):
+        """Open a menu to expand and collapse all items in the tree
+
+        Parameters
+        ----------
+        position: QPosition
+            The position where to open the menu"""
+        menu = QMenu()
+        expand_all_action = QAction("Expand all", self)
+        expand_all_action.triggered.connect(self.expandAll)
+        menu.addAction(expand_all_action)
+        collapse_all_action = QAction("Collapse all", self)
+        collapse_all_action.triggered.connect(self.collapseAll)
+        menu.addAction(collapse_all_action)
+        menu.exec_(self.viewport().mapToGlobal(position))

+

+
+
+
+

+[docs]
+class DependenciesDialog(QDialog):
+    """A dialog for displaying the dependencies"""
+
+    #: description label
+    label = None
+
+    #: the QVBoxLayout containing all the widgets
+    vbox = None
+
+    #: The :class:`DependenciesTree` that contains the package infos
+    tree = None
+
+    #: The QPushButton used for copying selected packages to the clipboard
+    bt_copy = None
+
+    #: A simple info label for info messages
+    info_label = None
+
+    #: A QTimer that clears the :attr:`info_label` after some time
+    timer = None
+
+    @docstrings.dedent
+    def __init__(self, versions, *args, **kwargs):
+        """
+        Parameters
+        ----------
+        %(DependenciesTree.parameters)s
+        """
+        super(DependenciesDialog, self).__init__(*args, **kwargs)
+        self.setWindowTitle("Dependencies")
+        self.versions = versions
+        self.vbox = layout = QVBoxLayout()
+
+        self.label = QLabel(
+            """
+            psyplot and the plugins depend on several python libraries. The
+            tree widget below lists the versions of the plugins and the
+            requirements. You can select the items in the tree and copy them to
+            clipboard.""",
+            parent=self,
+        )
+
+        layout.addWidget(self.label)
+
+        self.tree = DependenciesTree(versions, parent=self)
+        self.tree.setSelectionMode(QAbstractItemView.MultiSelection)
+        layout.addWidget(self.tree)
+
+        # copy button
+        self.bt_copy = QPushButton("Copy selection to clipboard")
+        self.bt_copy.setToolTip(
+            "Copy the selected packages in the above table to the clipboard."
+        )
+        self.bt_copy.clicked.connect(lambda: self.copy_selected())
+
+        self.bbox = QDialogButtonBox(QDialogButtonBox.Ok)
+        self.bbox.accepted.connect(self.accept)
+
+        hbox = QHBoxLayout()
+        hbox.addWidget(self.bt_copy)
+        hbox.addStretch(1)
+        hbox.addWidget(self.bbox)
+        layout.addLayout(hbox)
+
+        #: A label for simple status update
+        self.info_label = QLabel("", self)
+        layout.addWidget(self.info_label)
+        self.timer = QtCore.QTimer(self)
+        self.timer.timeout.connect(self.clear_label)
+
+        self.setLayout(layout)
+
+

+[docs]
+    def copy_selected(self, label=None):
+        """Copy the selected versions and items to the clipboard"""
+        d = {}
+        items = self.tree.selectedItems()
+        if not items:
+            QMessageBox.warning(
+                self,
+                "No packages selected!",
+                "Please select packages in the tree!",
+            )
+            return
+        for item in items:
+            d[item.text(0)] = item.text(1)
+        if label is None:
+            label = QApplication.clipboard()
+        label.setText("\n".join("%s: %s" % t for t in d.items()))
+        self.info_label.setText("Packages copied to clipboard.")
+        self.timer.start(3000)

+
+
+

+[docs]
+    def clear_label(self):
+        """Clear the info label"""
+        self.info_label.setText("")

+

+
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/fmt_widget.html b/_modules/psyplot_gui/fmt_widget.html new file mode 100644 index 0000000..41d6aa3 --- /dev/null +++ b/_modules/psyplot_gui/fmt_widget.html @@ -0,0 +1,1109 @@ + + + + + + psyplot_gui.fmt_widget — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.fmt_widget

+# -*- coding: utf-8 -*-
+"""Module defining a widget for updating the formatoption of the current
+project"""
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+import logging
+from collections import defaultdict
+from functools import partial
+from itertools import chain
+from warnings import warn
+
+import psyplot.plotter as psyp
+import psyplot.project as psy
+import six
+import yaml
+from IPython.core.interactiveshell import ExecutionResult
+from psyplot.data import isstring, safe_list
+from psyplot.utils import _temp_bool_prop, unique_everseen
+
+from psyplot_gui.common import DockMixin, PyErrorMessage, get_icon
+from psyplot_gui.compat.qtcompat import (
+    QCheckBox,
+    QComboBox,
+    QCompleter,
+    QHBoxLayout,
+    QIcon,
+    QLineEdit,
+    QListView,
+    QPushButton,
+    QStandardItem,
+    QStandardItemModel,
+    Qt,
+    QTextEdit,
+    QToolButton,
+    QVBoxLayout,
+    QWidget,
+    with_qt5,
+)
+from psyplot_gui.config.rcsetup import rcParams
+from psyplot_gui.plot_creator import CoordComboBox
+
+try:
+    from IPython.core.interactiveshell import ExecutionInfo
+except ImportError:
+    ExecutionInfo = None
+
+
+logger = logging.getLogger(__name__)
+
+
+COORDSGROUP = "__coords"
+ALLGROUP = "__all"
+
+
+

+[docs]
+class DimensionsWidget(QWidget):
+    """A widget for updating the dimensions"""
+
+    def __init__(self, parent, dim=None):
+        super(DimensionsWidget, self).__init__(parent)
+        self.coord_combo = CoordComboBox(self.get_ds, dim)
+        self.cb_use_coord = QCheckBox("show coordinates")
+        self.cb_close_popups = QCheckBox("close dropdowns")
+        self.cb_close_popups.setChecked(True)
+        self.toggle_close_popup()
+        self._single_selection = False
+
+        self.dim = dim
+        hbox = QHBoxLayout()
+        hbox.addWidget(self.cb_close_popups)
+        hbox.addWidget(self.cb_use_coord)
+        hbox.addWidget(self.coord_combo)
+        self.setLayout(hbox)
+        self.cb_use_coord.stateChanged.connect(self.reset_combobox)
+        self.cb_close_popups.stateChanged.connect(self.toggle_close_popup)
+        self.coord_combo.leftclick.connect(self.insert_from_combo)
+
+

+[docs]
+    def set_dim(self, dim):
+        self.dim = self.coord_combo.dim = dim

+
+
+

+[docs]
+    def slice2list(self, sl):
+        if not isinstance(sl, slice):
+            return sl
+        return list(range(*sl.indices(self.coord_combo.count() - 1)))

+
+
+

+[docs]
+    def reset_combobox(self):
+        """Clear all comboboxes"""
+        self.coord_combo.use_coords = self.cb_use_coord.isChecked()
+        self.coord_combo.clear()
+        self.coord_combo._is_empty = True

+
+
+

+[docs]
+    def toggle_close_popup(self):
+        self.coord_combo.close_popups = self.cb_close_popups.isChecked()

+
+
+

+[docs]
+    def insert_from_combo(self):
+        cb = self.coord_combo
+        inserts = list(
+            ind.row() - 1
+            for ind in cb.view().selectionModel().selectedIndexes()
+            if ind.row() > 0
+        )
+        if not inserts:
+            return
+        elif not self._single_selection:
+            try:
+                current = yaml.load(
+                    self.parent().get_text(), Loader=yaml.Loader
+                )
+            except Exception:
+                pass
+            else:
+                if current:
+                    current = self.slice2list(current)
+                    inserts = sorted(set(chain(inserts, safe_list(current))))
+        else:
+            inserts = inserts[0]
+
+        self.parent().set_obj(inserts)

+
+
+

+[docs]
+    def get_ds(self):
+        import psyplot.project as psy
+
+        project = psy.gcp()
+        datasets = project.datasets
+        dim = self.dim
+        dims = {ds.coords[dim].shape[0]: ds for ds in datasets.values()}
+        if len(dims) > 1:
+            warn(
+                "Datasets have differing dimensions lengths for the "
+                "%s dimension!" % dim
+            )
+        return min(dims.items())[1]

+
+
+

+[docs]
+    def set_single_selection(self, yes=True):
+        self._single_selection = yes
+        if yes:
+            self.coord_combo.view().setSelectionMode(QListView.SingleSelection)
+        else:
+            self.coord_combo.view().setSelectionMode(
+                QListView.ExtendedSelection
+            )

+

+
+
+
+

+[docs]
+class FormatoptionWidget(QWidget, DockMixin):
+    """
+    Widget to update the formatoptions of the current project
+
+    This widget, mainly made out of a combobox for the formatoption group,
+    a combobox for the formatoption, and a text editor, is designed
+    for updating the selected formatoptions for the current subproject.
+
+    The widget is connected to the :attr:`psyplot.project.Project.oncpchange`
+    signal and refills the comboboxes if the current subproject changes.
+
+    The text editor either accepts python code that will be executed by the
+    given `console`, or yaml code.
+    """
+
+    no_fmtos_update = _temp_bool_prop(
+        "no_fmtos_update", """update the fmto combo box or not"""
+    )
+
+    #: The combobox for the formatoption groups
+    group_combo = None
+
+    #: The combobox for the formatoptions
+    fmt_combo = None
+
+    #: The help_explorer to display the documentation of the formatoptions
+    help_explorer = None
+
+    #: The formatoption specific widget that is loaded from the formatoption
+    fmt_widget = None
+
+    #: A line edit for updating the formatoptions
+    line_edit = None
+
+    #: A multiline text editor for updating the formatoptions
+    text_edit = None
+
+    #: A button to switch between :attr:`line_edit` and :attr:`text_edit`
+    multiline_button = None
+
+    @property
+    def shell(self):
+        """The shell to execute the update of the formatoptions in the current
+        project"""
+        return self.console.kernel_manager.kernel.shell
+
+    def __init__(self, *args, **kwargs):
+        """
+        Parameters
+        ----------
+        help_explorer: psyplot_gui.help_explorer.HelpExplorer
+            The help explorer to show the documentation of one formatoption
+        console: psyplot_gui.console.ConsoleWidget
+            The console that can be used to update the current subproject via::
+
+                psy.gcp().update(**kwargs)
+
+            where ``**kwargs`` is defined through the selected formatoption
+            in the :attr:`fmt_combo` combobox and the value in the
+            :attr:`line_edit` editor
+        ``*args, **kwargs``
+            Any other keyword for the QWidget class
+        """
+        help_explorer = kwargs.pop("help_explorer", None)
+        console = kwargs.pop("console", None)
+        super(FormatoptionWidget, self).__init__(*args, **kwargs)
+        self.help_explorer = help_explorer
+        self.console = console
+        self.error_msg = PyErrorMessage(self)
+
+        # ---------------------------------------------------------------------
+        # -------------------------- Child widgets ----------------------------
+        # ---------------------------------------------------------------------
+        self.group_combo = QComboBox(parent=self)
+        self.fmt_combo = QComboBox(parent=self)
+        self.line_edit = QLineEdit(parent=self)
+        self.text_edit = QTextEdit(parent=self)
+        self.run_button = QToolButton(parent=self)
+
+        # completer for the fmto widget
+        self.fmt_combo.setEditable(True)
+        self.fmt_combo.setInsertPolicy(QComboBox.NoInsert)
+        self.fmto_completer = completer = QCompleter(
+            ["time", "lat", "lon", "lev"]
+        )
+        completer.setCompletionMode(QCompleter.PopupCompletion)
+        completer.activated[str].connect(self.set_fmto)
+        if with_qt5:
+            completer.setFilterMode(Qt.MatchContains)
+        completer.setModel(QStandardItemModel())
+        self.fmt_combo.setCompleter(completer)
+
+        self.dim_widget = DimensionsWidget(parent=self)
+        self.dim_widget.setVisible(False)
+
+        self.multiline_button = QPushButton("Multiline", parent=self)
+        self.multiline_button.setCheckable(True)
+
+        self.yaml_cb = QCheckBox("Yaml syntax")
+        self.yaml_cb.setChecked(True)
+
+        self.keys_button = QPushButton("Keys", parent=self)
+        self.summaries_button = QPushButton("Summaries", parent=self)
+        self.docs_button = QPushButton("Docs", parent=self)
+
+        self.grouped_cb = QCheckBox("grouped", parent=self)
+        self.all_groups_cb = QCheckBox("all groups", parent=self)
+        self.include_links_cb = QCheckBox("include links", parent=self)
+
+        self.text_edit.setVisible(False)
+
+        # ---------------------------------------------------------------------
+        # -------------------------- Descriptions -----------------------------
+        # ---------------------------------------------------------------------
+
+        self.group_combo.setToolTip("Select the formatoption group")
+        self.fmt_combo.setToolTip("Select the formatoption to update")
+        self.line_edit.setToolTip(
+            "Insert the value which what you want to update the selected "
+            "formatoption and hit right button. The code is executed in the "
+            "main console."
+        )
+        self.yaml_cb.setToolTip(
+            "Use the yaml syntax for the values inserted in the above cell. "
+            "Otherwise the content there is evaluated as a python expression "
+            "in the terminal"
+        )
+        self.text_edit.setToolTip(self.line_edit.toolTip())
+        self.run_button.setIcon(QIcon(get_icon("run_arrow.png")))
+        self.run_button.setToolTip("Update the selected formatoption")
+        self.multiline_button.setToolTip(
+            "Allow linebreaks in the text editor line above."
+        )
+        self.keys_button.setToolTip(
+            "Show the formatoption keys in this group (or in all "
+            "groups) in the help explorer"
+        )
+        self.summaries_button.setToolTip(
+            "Show the formatoption summaries in this group (or in all "
+            "groups) in the help explorer"
+        )
+        self.docs_button.setToolTip(
+            "Show the formatoption documentations in this group (or in all "
+            "groups) in the help explorer"
+        )
+        self.grouped_cb.setToolTip(
+            "Group the formatoptions before displaying them in the help "
+            "explorer"
+        )
+        self.all_groups_cb.setToolTip(
+            "Use all groups when displaying the " "keys, docs or summaries"
+        )
+        self.include_links_cb.setToolTip(
+            "Include links to remote documentations when showing the "
+            "keys, docs and summaries in the help explorer (requires "
+            "intersphinx)"
+        )
+
+        # ---------------------------------------------------------------------
+        # -------------------------- Connections ------------------------------
+        # ---------------------------------------------------------------------
+        self.group_combo.currentIndexChanged[int].connect(self.fill_fmt_combo)
+        self.fmt_combo.currentIndexChanged[int].connect(self.show_fmt_info)
+        self.fmt_combo.currentIndexChanged[int].connect(self.load_fmt_widget)
+        self.fmt_combo.currentIndexChanged[int].connect(
+            self.set_current_fmt_value
+        )
+        self.run_button.clicked.connect(self.run_code)
+        self.line_edit.returnPressed.connect(self.run_button.click)
+        self.multiline_button.clicked.connect(self.toggle_line_edit)
+        self.keys_button.clicked.connect(
+            partial(self.show_all_fmt_info, "keys")
+        )
+        self.summaries_button.clicked.connect(
+            partial(self.show_all_fmt_info, "summaries")
+        )
+        self.docs_button.clicked.connect(
+            partial(self.show_all_fmt_info, "docs")
+        )
+
+        # ---------------------------------------------------------------------
+        # ------------------------------ Layouts ------------------------------
+        # ---------------------------------------------------------------------
+        self.combos = QHBoxLayout()
+        self.combos.addWidget(self.group_combo)
+        self.combos.addWidget(self.fmt_combo)
+
+        self.execs = QHBoxLayout()
+        self.execs.addWidget(self.line_edit)
+        self.execs.addWidget(self.text_edit)
+        self.execs.addWidget(self.run_button)
+
+        self.info_box = QHBoxLayout()
+        self.info_box.addWidget(self.multiline_button)
+        self.info_box.addWidget(self.yaml_cb)
+        self.info_box.addStretch(0)
+        for w in [
+            self.keys_button,
+            self.summaries_button,
+            self.docs_button,
+            self.all_groups_cb,
+            self.grouped_cb,
+            self.include_links_cb,
+        ]:
+            self.info_box.addWidget(w)
+
+        self.vbox = QVBoxLayout()
+        self.vbox.addLayout(self.combos)
+        self.vbox.addWidget(self.dim_widget)
+        self.vbox.addLayout(self.execs)
+        self.vbox.addLayout(self.info_box)
+
+        self.vbox.setSpacing(0)
+
+        self.setLayout(self.vbox)
+
+        # fill with content
+        self.fill_combos_from_project(psy.gcp())
+        psy.Project.oncpchange.connect(self.fill_combos_from_project)
+        rcParams.connect("fmt.sort_by_key", self.refill_from_rc)
+
+

+[docs]
+    def refill_from_rc(self, sort_by_key):
+        from psyplot.project import gcp
+
+        self.fill_combos_from_project(gcp())

+
+
+

+[docs]
+    def fill_combos_from_project(self, project):
+        """Fill :attr:`group_combo` and :attr:`fmt_combo` from a project
+
+        Parameters
+        ----------
+        project: psyplot.project.Project
+            The project to use"""
+        if rcParams["fmt.sort_by_key"]:
+
+            def sorter(fmto):
+                return fmto.key
+
+        else:
+            sorter = self.get_name
+
+        current_text = self.group_combo.currentText()
+        with self.no_fmtos_update:
+            self.group_combo.clear()
+            if project is None or project.is_main or not len(project):
+                self.fmt_combo.clear()
+                self.groups = []
+                self.fmtos = []
+                self.line_edit.setEnabled(False)
+                return
+            self.line_edit.setEnabled(True)
+            # get dimensions
+            it_vars = chain.from_iterable(
+                arr.psy.iter_base_variables for arr in project.arrays
+            )
+            dims = next(it_vars).dims
+            sdims = set(dims)
+            for var in it_vars:
+                sdims.intersection_update(var.dims)
+            coords = [d for d in dims if d in sdims]
+            coords_name = [COORDSGROUP] if coords else []
+            coords_verbose = ["Dimensions"] if coords else []
+            coords = [coords] if coords else []
+
+            if len(project.plotters):
+                # get formatoptions and group them alphabetically
+                grouped_fmts = defaultdict(list)
+                for fmto in project._fmtos:
+                    grouped_fmts[fmto.group].append(fmto)
+                for val in six.itervalues(grouped_fmts):
+                    val.sort(key=sorter)
+                grouped_fmts = dict(
+                    sorted(
+                        six.iteritems(grouped_fmts),
+                        key=lambda t: psyp.groups.get(t[0], t[0]),
+                    )
+                )
+                fmt_groups = list(grouped_fmts.keys())
+                # save original names
+                self.groups = coords_name + [ALLGROUP] + fmt_groups
+                # save verbose group names (which are used in the combo box)
+                self.groupnames = (
+                    coords_verbose
+                    + ["All formatoptions"]
+                    + list(map(lambda s: psyp.groups.get(s, s), fmt_groups))
+                )
+                # save formatoptions
+                fmtos = list(grouped_fmts.values())
+                self.fmtos = (
+                    coords + [sorted(chain(*fmtos), key=sorter)] + fmtos
+                )
+            else:
+                self.groups = coords_name
+                self.groupnames = coords_verbose
+                self.fmtos = coords
+            self.group_combo.addItems(self.groupnames)
+            ind = self.group_combo.findText(current_text)
+            self.group_combo.setCurrentIndex(ind if ind >= 0 else 0)
+        self.fill_fmt_combo(self.group_combo.currentIndex())

+
+
+

+[docs]
+    def get_name(self, fmto):
+        """Get the name of a :class:`psyplot.plotter.Formatoption` instance"""
+        if isinstance(fmto, six.string_types):
+            return fmto
+        return "%s (%s)" % (fmto.name, fmto.key) if fmto.name else fmto.key

+
+
+    @property
+    def fmto(self):
+        return self.fmtos[self.group_combo.currentIndex()][
+            self.fmt_combo.currentIndex()
+        ]
+
+    @fmto.setter
+    def fmto(self, value):
+        name = self.get_name(value)
+        for i, fmtos in enumerate(self.fmtos):
+            if i == 1:  # all formatoptions
+                continue
+            if name in map(self.get_name, fmtos):
+                with self.no_fmtos_update:
+                    self.group_combo.setCurrentIndex(i)
+                self.fill_fmt_combo(i, name)
+                return
+
+

+[docs]
+    def toggle_line_edit(self):
+        """Switch between the :attr:`line_edit` and :attr:`text_edit`
+
+        This method is called when the :attr:`multiline_button` is clicked
+        and switches between the single line :attr:``line_edit` and the
+        multiline :attr:`text_edit`
+        """
+        # switch to multiline text edit
+        if (
+            self.multiline_button.isChecked()
+            and not self.text_edit.isVisible()
+        ):
+            self.line_edit.setVisible(False)
+            self.text_edit.setVisible(True)
+            self.text_edit.setPlainText(self.line_edit.text())
+        elif (
+            not self.multiline_button.isChecked()
+            and not self.line_edit.isVisible()
+        ):
+            self.line_edit.setVisible(True)
+            self.text_edit.setVisible(False)
+            self.line_edit.setText(self.text_edit.toPlainText())

+
+
+

+[docs]
+    def fill_fmt_combo(self, i, current_text=None):
+        """Fill the :attr:`fmt_combo` combobox based on the current group name"""
+        if not self.no_fmtos_update:
+            with self.no_fmtos_update:
+                if current_text is None:
+                    current_text = self.fmt_combo.currentText()
+                self.fmt_combo.clear()
+                self.fmt_combo.addItems(
+                    list(map(self.get_name, self.fmtos[i]))
+                )
+                ind = self.fmt_combo.findText(current_text)
+                self.fmt_combo.setCurrentIndex(ind if ind >= 0 else 0)
+                # update completer model
+                self.setup_fmt_completion_model()
+            idx = self.fmt_combo.currentIndex()
+            self.show_fmt_info(idx)
+            self.load_fmt_widget(idx)
+            self.set_current_fmt_value(idx)

+
+
+

+[docs]
+    def set_fmto(self, name):
+        self.fmto = name

+
+
+

+[docs]
+    def setup_fmt_completion_model(self):
+        fmtos = list(
+            unique_everseen(
+                map(self.get_name, chain.from_iterable(self.fmtos))
+            )
+        )
+        model = self.fmto_completer.model()
+        model.setRowCount(len(fmtos))
+        for i, name in enumerate(fmtos):
+            model.setItem(i, QStandardItem(name))

+
+
+

+[docs]
+    def load_fmt_widget(self, i):
+        """Load the formatoption specific widget
+
+        This method loads the formatoption specific widget from the
+        :meth:`psyplot.plotter.Formatoption.get_fmt_widget` method and
+        displays it above the :attr:`line_edit`
+
+        Parameters
+        ----------
+        i: int
+            The index of the current formatoption"""
+        self.remove_fmt_widget()
+        group_ind = self.group_combo.currentIndex()
+        if not self.no_fmtos_update:
+            from psyplot.project import gcp
+
+            if self.groups[group_ind] == COORDSGROUP:
+                dim = self.fmtos[group_ind][i]
+                self.fmt_widget = self.dim_widget
+                self.dim_widget.set_dim(dim)
+                self.dim_widget.set_single_selection(dim not in gcp()[0].dims)
+                self.dim_widget.setVisible(True)
+            else:
+                fmto = self.fmtos[group_ind][i]
+                self.fmt_widget = fmto.get_fmt_widget(self, gcp())
+                if self.fmt_widget is not None:
+                    self.vbox.insertWidget(2, self.fmt_widget)

+
+
+

+[docs]
+    def reset_fmt_widget(self):
+        idx = self.fmt_combo.currentIndex()
+        self.load_fmt_widget(idx)
+        self.set_current_fmt_value(idx)

+
+
+

+[docs]
+    def remove_fmt_widget(self):
+        if self.fmt_widget is not None:
+            self.fmt_widget.hide()
+            if self.fmt_widget is self.dim_widget:
+                self.fmt_widget.reset_combobox()
+            else:
+                self.vbox.removeWidget(self.fmt_widget)
+                self.fmt_widget.close()
+            del self.fmt_widget

+
+
+

+[docs]
+    def set_current_fmt_value(self, i):
+        """Add the value of the current formatoption to the line text"""
+        group_ind = self.group_combo.currentIndex()
+        if not self.no_fmtos_update:
+            if self.groups[group_ind] == COORDSGROUP:
+                from psyplot.project import gcp
+
+                dim = self.fmtos[group_ind][i]
+                self.set_obj(gcp().arrays[0].psy.idims[dim])
+            else:
+                fmto = self.fmtos[group_ind][i]
+                self.set_obj(fmto.value)

+
+
+

+[docs]
+    def show_fmt_info(self, i):
+        """Show the documentation of the formatoption in the help explorer"""
+        group_ind = self.group_combo.currentIndex()
+        if not self.no_fmtos_update and self.groups[group_ind] != COORDSGROUP:
+            fmto = self.fmtos[self.group_combo.currentIndex()][i]
+            fmto.plotter.show_docs(
+                fmto.key, include_links=self.include_links_cb.isChecked()
+            )

+
+
+

+[docs]
+    def run_code(self):
+        """Run the update of the project inside the :attr:`shell`"""
+        if self.line_edit.isVisible():
+            text = str(self.line_edit.text())
+        else:
+            text = str(self.text_edit.toPlainText())
+        if not text or not self.fmtos:
+            return
+        group_ind = self.group_combo.currentIndex()
+        if self.groups[group_ind] == COORDSGROUP:
+            key = self.fmtos[group_ind][self.fmt_combo.currentIndex()]
+            param = "dims"
+        else:
+            key = self.fmtos[group_ind][self.fmt_combo.currentIndex()].key
+            param = "fmt"
+        if self.yaml_cb.isChecked():
+            import psyplot.project as psy
+
+            psy.gcp().update(**{key: yaml.load(text, Loader=yaml.Loader)})
+        else:
+            code = "psy.gcp().update(%s={'%s': %s})" % (param, key, text)
+            if ExecutionInfo is not None:
+                info = ExecutionInfo(
+                    raw_cell=code,
+                    store_history=False,
+                    silent=True,
+                    shell_futures=False,
+                    cell_id=None,
+                )
+                e = ExecutionResult(info)
+            else:
+                e = ExecutionResult()
+            self.console.run_command_in_shell(code, e)
+            try:
+                e.raise_error()
+            except Exception:  # reset the console and clear the error message
+                raise
+            finally:
+                self.console.reset()

+
+
+

+[docs]
+    def get_text(self):
+        """Get the current update text"""
+        if self.line_edit.isVisible():
+            return self.line_edit.text()
+        else:
+            return self.text_edit.toPlainText()

+
+
+

+[docs]
+    def get_obj(self):
+        """Get the current update text"""
+        if self.line_edit.isVisible():
+            txt = self.line_edit.text()
+        else:
+            txt = self.text_edit.toPlainText()
+        try:
+            obj = yaml.load(txt, Loader=yaml.Loader)
+        except Exception:
+            self.error_msg.showTraceback("Could not load %s" % txt)
+        else:
+            return obj

+
+
+

+[docs]
+    def insert_obj(self, obj):
+        """Add a string to the formatoption widget"""
+        current = self.get_text()
+        use_yaml = self.yaml_cb.isChecked()
+        use_line_edit = self.line_edit.isVisible()
+        # strings are treated separately such that we consider quotation marks
+        # at the borders
+        if isstring(obj) and current:
+            if use_line_edit:
+                pos = self.line_edit.cursorPosition()
+            else:
+                pos = self.text_edit.textCursor().position()
+            if pos not in [0, len(current)]:
+                s = obj
+            else:
+                if current[0] in ['"', "'"]:
+                    current = current[1:-1]
+                self.clear_text()
+                if pos == 0:
+                    s = '"' + obj + current + '"'
+                else:
+                    s = '"' + current + obj + '"'
+                current = ""
+        elif isstring(obj):  # add quotation marks
+            s = '"' + obj + '"'
+        elif not use_yaml:
+            s = repr(obj)
+        else:
+            s = yaml.dump(obj, default_flow_style=True).strip()
+            if s.endswith("\n..."):
+                s = s[:-4]
+        if use_line_edit:
+            self.line_edit.insert(s)
+        else:
+            self.text_edit.insertPlainText(s)

+
+
+

+[docs]
+    def clear_text(self):
+        if self.line_edit.isVisible():
+            self.line_edit.clear()
+        else:
+            self.text_edit.clear()

+
+
+

+[docs]
+    def set_obj(self, obj):
+        self.clear_text()
+        self.insert_obj(obj)

+
+
+

+[docs]
+    def show_all_fmt_info(self, what):
+        """Show the keys, summaries or docs of the formatoptions
+
+        Calling this function let's the help browser show the documentation
+        etc. of all docs or only the selected group determined by the state of
+        the :attr:`grouped_cb` and :attr:`all_groups_cb` checkboxes
+
+        Parameters
+        ----------
+        what: {'keys', 'summaries', 'docs'}
+            Determines what to show"""
+        if not self.fmtos:
+            return
+        if (
+            self.all_groups_cb.isChecked()
+            or self.group_combo.currentIndex() < 2
+        ):
+            fmtos = list(
+                chain.from_iterable(
+                    fmto_group
+                    for i, fmto_group in enumerate(self.fmtos)
+                    if self.groups[i] not in [ALLGROUP, COORDSGROUP]
+                )
+            )
+        else:
+            fmtos = self.fmtos[self.group_combo.currentIndex()]
+        plotter = fmtos[0].plotter
+        getattr(plotter, "show_" + what)(
+            [fmto.key for fmto in fmtos],
+            grouped=self.grouped_cb.isChecked(),
+            include_links=self.include_links_cb.isChecked(),
+        )

+

+
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/help_explorer.html b/_modules/psyplot_gui/help_explorer.html new file mode 100644 index 0000000..c18ed1a --- /dev/null +++ b/_modules/psyplot_gui/help_explorer.html @@ -0,0 +1,1641 @@ + + + + + + psyplot_gui.help_explorer — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.help_explorer

+# -*- coding: utf-8 -*-
+"""Help explorer widget supplying a simple web browser and a plain text help
+viewer"""
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+import inspect
+import logging
+import os.path as osp
+import re
+import shutil
+import sys
+from collections import namedtuple
+from itertools import chain
+from tempfile import mkdtemp
+
+import six
+from IPython.core.oinspect import getdoc, signature
+from psyplot.docstring import docstrings, indent
+from psyplot.utils import _temp_bool_prop
+
+from psyplot_gui.common import (
+    DockMixin,
+    PyErrorMessage,
+    StreamToLogger,
+    get_icon,
+    get_module_path,
+    is_running_tests,
+)
+from psyplot_gui.compat.qtcompat import (
+    QAction,
+    QComboBox,
+    QCompleter,
+    QFrame,
+    QHBoxLayout,
+    QIcon,
+    QMenu,
+    QPlainTextEdit,
+    QSortFilterProxyModel,
+    QStandardItemModel,
+    Qt,
+    QtCore,
+    QtGui,
+    QToolButton,
+    QVBoxLayout,
+    QWebEngineView,
+    QWidget,
+    asstring,
+    isstring,
+    with_qt5,
+)
+from psyplot_gui.config.rcsetup import rcParams
+
+try:
+    from sphinx.application import Sphinx
+    from sphinx.pycode import ModuleAnalyzer
+
+    try:
+        from psyplot.sphinxext.extended_napoleon import (
+            ExtendedGoogleDocstring as GoogleDocstring,
+        )
+        from psyplot.sphinxext.extended_napoleon import (
+            ExtendedNumpyDocstring as NumpyDocstring,
+        )
+    except ImportError:
+        from sphinx.ext.napoleon import GoogleDocstring, NumpyDocstring
+    with_sphinx = True
+except ImportError:
+    with_sphinx = False
+
+if six.PY2:
+    from urlparse import urlparse
+else:
+    from urllib.parse import urlparse
+
+
+try:
+    import pathlib
+
+    def file2html(fname):
+        return pathlib.Path(fname).as_uri()
+
+except ImportError:
+
+

+[docs]
+    def file2html(fname):
+        return "file://" + fname

+
+
+
+

+[docs]
+def html2file(url):
+    p = urlparse(asstring(url))
+    # skip the first '/' on windows platform
+    return osp.abspath(
+        osp.join(p.netloc, p.path[int(sys.platform == "win32") :])
+    )

+
+
+
+_viewers = dict()
+
+
+logger = logging.getLogger(__name__)
+
+
+

+[docs]
+class UrlCombo(QComboBox):
+    """A editable ComboBox with autocompletion"""
+
+    def __init__(self, *args, **kwargs):
+        super(UrlCombo, self).__init__(*args, **kwargs)
+        self.setInsertPolicy(self.InsertAtTop)
+        self.setFocusPolicy(Qt.StrongFocus)
+        self.setEditable(True)
+        self.completer = QCompleter(self)
+
+        # always show all completions
+        self.completer.setCompletionMode(QCompleter.UnfilteredPopupCompletion)
+        self.pFilterModel = QSortFilterProxyModel(self)
+        self.pFilterModel.setFilterCaseSensitivity(Qt.CaseInsensitive)
+
+        self.completer.setPopup(self.completer.popup())
+
+        self.setCompleter(self.completer)
+
+        self.lineEdit().textEdited[str].connect(
+            self.pFilterModel.setFilterFixedString
+        )
+        self.completer.activated.connect(self.add_text_on_top)
+        self.setModel(QStandardItemModel())
+
+

+[docs]
+    def setModel(self, model):
+        """Reimplemented to also set the model of the filter and completer"""
+        super(UrlCombo, self).setModel(model)
+        self.pFilterModel.setSourceModel(model)
+        self.completer.setModel(self.pFilterModel)

+
+
+

+[docs]
+    def add_text_on_top(self, text=None, block=False):
+        """Add the given text as the first item"""
+        if text is None:
+            text = self.currentText()
+        ind = self.findText(text)
+        if block:
+            self.blockSignals(True)
+        if ind == -1:
+            self.insertItem(0, text)
+        elif ind != 0:
+            self.removeItem(ind)
+            self.insertItem(0, text)
+        self.setCurrentIndex(0)
+        if block:
+            self.blockSignals(False)

+
+
+    # replace keyPressEvent to always insert the selected item at the top
+

+[docs]
+    def keyPressEvent(self, event):
+        """Handle key press events"""
+        if event.key() == Qt.Key_Return or event.key() == Qt.Key_Enter:
+            self.add_text_on_top()
+        else:
+            QComboBox.keyPressEvent(self, event)

+

+
+
+
+

+[docs]
+class UrlBrowser(QFrame):
+    """Very simple browser with session history and autocompletion based upon
+    the :class:`PyQt5.QtWebEngineWidgets.QWebEngineView` class
+
+    Warnings
+    --------
+    This class is known to crash under PyQt4 when new web page domains are
+    loaded. Hence it should be handled with care"""
+
+    completed = _temp_bool_prop(
+        "completed",
+        "Boolean whether the html page loading is completed.",
+        default=True,
+    )
+
+    url_like_re = re.compile(r"^\w+://")
+
+    doc_urls = dict(
+        [
+            ("startpage", "https://startpage.com/"),
+            ("psyplot", "http://psyplot.github.io/psyplot/"),
+            ("pyplot", "http://matplotlib.org/api/pyplot_api.html"),
+            (
+                "seaborn",
+                "http://stanford.edu/~mwaskom/software/seaborn/api.html",
+            ),
+            (
+                "cartopy",
+                "http://scitools.org.uk/cartopy/docs/latest/index.html",
+            ),
+            ("xarray", "http://xarray.pydata.org/en/stable/"),
+            ("pandas", "http://pandas.pydata.org/pandas-docs/stable/"),
+            (
+                "numpy",
+                "https://docs.scipy.org/doc/numpy/reference/routines.html",
+            ),
+        ]
+    )
+
+    #: The initial url showed in the webview. If None, nothing will be
+    #: displayed
+    default_url = None
+
+    #: adress line
+    tb_url = None
+
+    #: button to go to previous url
+    bt_back = None
+
+    #: button to go to next url
+    bt_ahead = None
+
+    #: refresh the current url
+    bt_refresh = None
+
+    #: button to go lock to the current url
+    bt_lock = None
+
+    #: button to disable browsing in www
+    bt_url_lock = None
+
+    #: The upper part of the browser containing all the buttons
+    button_box = None
+
+    #: The upper most layout aranging the button box and the html widget
+    vbox = None
+
+    #: default value for :attr:`bt_lock`. Is set during browser
+    #: initialization
+    bt_lock_default = None
+
+    #: default value for :attr:`bt_url_lock`. Is set during browser
+    #: initialization
+    bt_url_lock_default = None
+
+    def __init__(self, *args, **kwargs):
+        super(UrlBrowser, self).__init__(*args, **kwargs)
+
+        # ---------------------------------------------------------------------
+        # ---------------------------- upper buttons --------------------------
+        # ---------------------------------------------------------------------
+        # adress line
+        self.tb_url = UrlCombo(self)
+        # button to go to previous url
+        self.bt_back = QToolButton(self)
+        # button to go to next url
+        self.bt_ahead = QToolButton(self)
+        # refresh the current url
+        self.bt_refresh = QToolButton(self)
+        # button to go lock to the current url
+        self.bt_lock = QToolButton(self)
+        # button to disable browsing in www
+        self.bt_url_lock = QToolButton(self)
+
+        # ---------------------------- buttons settings -----------------------
+        self.bt_back.setIcon(QIcon(get_icon("previous.png")))
+        self.bt_back.setToolTip("Go back one page")
+        self.bt_ahead.setIcon(QIcon(get_icon("next.png")))
+        self.bt_back.setToolTip("Go forward one page")
+
+        self.bt_refresh.setIcon(QIcon(get_icon("refresh.png")))
+        self.bt_refresh.setToolTip("Refresh the current page")
+
+        self.bt_lock.setCheckable(True)
+        self.bt_url_lock.setCheckable(True)
+
+        if not with_qt5 and rcParams["help_explorer.online"] is None:
+            # We now that the browser can crash with Qt4, therefore we disable
+            # the browing in the internet
+            self.bt_url_lock.click()
+            rcParams["help_explorer.online"] = False
+        elif rcParams["help_explorer.online"] is False:
+            self.bt_url_lock.click()
+        elif rcParams["help_explorer.online"] is None:
+            rcParams["help_explorer.online"] = True
+        rcParams.connect("help_explorer.online", self.update_url_lock_from_rc)
+
+        self.bt_url_lock.clicked.connect(self.toogle_url_lock)
+        self.bt_lock.clicked.connect(self.toogle_lock)
+
+        # tooltip and icons of lock and url_lock are set in toogle_lock and
+        # toogle_url_lock
+        self.toogle_lock()
+        self.toogle_url_lock()
+
+        # ---------------------------------------------------------------------
+        # --------- initialization and connection of the web view -------------
+        # ---------------------------------------------------------------------
+
+        #: The actual widget showing the html content
+        self.html = QWebEngineView(parent=self)
+        self.html.loadStarted.connect(self.completed)
+        self.html.loadFinished.connect(self.completed)
+
+        self.tb_url.currentIndexChanged[str].connect(self.browse)
+        self.bt_back.clicked.connect(self.html.back)
+        self.bt_ahead.clicked.connect(self.html.forward)
+        self.bt_refresh.clicked.connect(self.html.reload)
+        self.html.urlChanged.connect(self.url_changed)
+
+        # ---------------------------------------------------------------------
+        # ---------------------------- layouts --------------------------------
+        # ---------------------------------------------------------------------
+
+        # The upper part of the browser containing all the buttons
+        self.button_box = button_box = QHBoxLayout()
+
+        button_box.addWidget(self.bt_back)
+        button_box.addWidget(self.bt_ahead)
+        button_box.addWidget(self.tb_url)
+        button_box.addWidget(self.bt_refresh)
+        button_box.addWidget(self.bt_lock)
+        button_box.addWidget(self.bt_url_lock)
+
+        # The upper most layout aranging the button box and the html widget
+        self.vbox = vbox = QVBoxLayout()
+        self.vbox.setContentsMargins(0, 0, 0, 0)
+        vbox.addLayout(button_box)
+
+        vbox.addWidget(self.html)
+
+        self.setLayout(vbox)
+
+        if self.default_url is not None:
+            self.tb_url.addItem(self.default_url)
+
+        self.bt_lock_default = bool(self.bt_lock.isChecked())
+        self.bt_url_lock_default = bool(self.bt_url_lock.isChecked())
+
+

+[docs]
+    def browse(self, url):
+        """Make a web browse on the given url and show the page on the Webview
+        widget."""
+        if self.bt_lock.isChecked():
+            return
+        if not self.url_like_re.match(url):
+            url = "https://" + url
+        if self.bt_url_lock.isChecked() and url.startswith("http"):
+            return
+        if not self.completed:
+            logger.debug("Stopping current load...")
+            self.html.stop()
+            self.completed = True
+        logger.debug("Loading %s", url)
+        # we use :meth:`PyQt5.QtWebEngineWidgets.QWebEngineView.setUrl` instead
+        # of :meth:`PyQt5.QtWebEngineWidgets.QWebEngineView.load` because that
+        # changes the url directly and is more useful for unittests
+        self.html.setUrl(QtCore.QUrl(url))

+
+
+

+[docs]
+    def url_changed(self, url):
+        """Triggered when the url is changed to update the adress line"""
+        try:
+            url = url.toString()
+        except AttributeError:
+            pass
+        logger.debug("url changed to %s", url)
+        try:
+            self.tb_url.setCurrentText(url)
+        except AttributeError:  # Qt4
+            self.tb_url.setEditText(url)
+        self.tb_url.add_text_on_top(url, block=True)

+
+
+

+[docs]
+    def update_url_lock_from_rc(self, online):
+        if (
+            online
+            and self.bt_url_lock.isChecked()
+            or not online
+            and not self.bt_url_lock.isChecked()
+        ):
+            self.bt_url_lock.click()

+
+
+

+[docs]
+    def toogle_url_lock(self):
+        """Disable (or enable) the loading of web pages in www"""
+        bt = self.bt_url_lock
+        offline = bt.isChecked()
+        bt.setIcon(
+            QIcon(get_icon("world_red.png" if offline else "world.png"))
+        )
+        online_message = "Go online"
+        if not with_qt5:
+            online_message += (
+                "\nWARNING: This mode is unstable under Qt4 "
+                "and might result in a complete program crash!"
+            )
+        bt.setToolTip(online_message if offline else "Offline mode")
+        if rcParams["help_explorer.online"] is offline:
+            rcParams["help_explorer.online"] = not offline

+
+
+

+[docs]
+    def toogle_lock(self):
+        """Disable (or enable) the changing of the current webpage"""
+        bt = self.bt_lock
+        bt.setIcon(
+            QIcon(get_icon("lock.png" if bt.isChecked() else "lock_open.png"))
+        )
+        bt.setToolTip("Unlock" if bt.isChecked() else "Lock to current page")

+

+
+
+
+

+[docs]
+class HelpMixin(object):
+    """Base class for providing help on an object"""
+
+    #: Object containing the necessary fields to describe an object given to
+    #: the help widget. The descriptor is set up by the :meth:`describe_object`
+    #: method.
+    object_descriptor = namedtuple("ObjectDescriptor", ["obj", "name"])
+
+    #: :class:`bool` determining whether the documentation of an object can be
+    #: shown or not
+    can_document_object = True
+    #: :class:`bool` determining whether this class can show restructured text
+    can_show_rst = True
+
+

+[docs]
+    @docstrings.get_sections(base="HelpMixin.show_help")
+    @docstrings.dedent
+    def show_help(self, obj, oname="", files=None):
+        """
+        Show the rst documentation for the given object
+
+        Parameters
+        ----------
+        obj: object
+            The object to get the documentation for
+        oname: str
+            The name to use for the object in the documentation
+        files: list of str
+            A path to additional files that shall be used to process the
+            docs"""
+        descriptor = self.describe_object(obj, oname)
+        doc = self.get_doc(descriptor)
+        return self.show_rst(doc, descriptor=descriptor, files=files)

+
+
+

+[docs]
+    def header(self, descriptor, sig):
+        """Format the header and include object name and signature `sig`
+
+        Returns
+        -------
+        str
+            The header for the documentation"""
+        bars = "=" * len(descriptor.name + sig)
+        return bars + "\n" + descriptor.name + sig + "\n" + bars + "\n"

+
+
+

+[docs]
+    def describe_object(self, obj, oname=""):
+        """Return an instance of the :attr:`object_descriptor` class
+
+        Returns
+        -------
+        :attr:`object_descriptor`
+            The descriptor containing the information on the object"""
+        return self.object_descriptor(obj, oname)

+
+
+

+[docs]
+    def get_doc(self, descriptor):
+        """Get the documentation of the object in the given `descriptor`
+
+        Parameters
+        ----------
+        descriptor: instance of :attr:`object_descriptor`
+            The descriptor containig the information on the specific object
+
+        Returns
+        -------
+        str
+            The header and documentation of the object in the descriptor
+
+        Notes
+        -----
+        This method uses the :func:`IPython.core.oinspect.getdoc` function to
+        get the documentation and the :func:`IPython.core.oinspect.signature`
+        function to get the signature. Those function (different from the
+        inspect module) do not fail when the object is not saved"""
+        obj = descriptor.obj
+        oname = descriptor.name
+        sig = ""
+        obj_sig = obj
+        if callable(obj):
+            if inspect.isclass(obj):
+                oname = oname or obj.__name__
+                obj_sig = getattr(obj, "__init__", obj)
+            else:
+                obj_sig = getattr(obj, "__call__", obj)
+
+            try:
+                sig = str(signature(obj_sig))
+                sig = re.sub(r"^\(\s*self,\s*", "(", sig)
+            except Exception:
+                logger.debug(
+                    "Failed to get signature from %s!" % (obj,), exc_info=True
+                )
+        oname = oname or type(oname).__name__
+        head = self.header(descriptor, sig)
+        lines = []
+        ds = getdoc(obj)
+        if ds:
+            lines.append("")
+            lines.append(ds)
+        if inspect.isclass(obj) and hasattr(obj, "__init__"):
+            init_ds = getdoc(obj.__init__)
+            if init_ds is not None:
+                lines.append("\n" + init_ds)
+        elif hasattr(obj, "__call__"):
+            call_ds = getdoc(obj.__call__)
+            if call_ds and call_ds != getdoc(object.__call__):
+                lines.append("\n" + call_ds)
+        doc = self.process_docstring(lines, descriptor)
+        return head + "\n" + doc

+
+
+

+[docs]
+    def process_docstring(self, lines, descriptor):
+        """Make final modification on the rst lines
+
+        Returns
+        -------
+        str
+            The docstring"""
+        return "\n".join(lines)

+
+
+

+[docs]
+    @docstrings.get_sections(base="HelpMixin.show_rst")
+    @docstrings.dedent
+    def show_rst(self, text, oname="", descriptor=None, files=None):
+        """
+        Abstract method which needs to be implemented by th widget to show
+        restructured text
+
+        Parameters
+        ----------
+        text: str
+            The text to show
+        oname: str
+            The object name
+        descriptor: instance of :attr:`object_descriptor`
+            The object descriptor holding the informations
+        files: list of str
+            A path to additional files that shall be used to display the docs
+
+        Returns
+        -------
+        bool
+            True if the text is displayed
+        """
+        return False

+
+
+

+[docs]
+    @docstrings.get_sections(base="HelpMixin.show_intro")
+    def show_intro(self, text=""):
+        """
+        Show an intro message
+
+        Parameters
+        ----------
+        s: str
+            A string in reStructured Text format to show"""
+        title = "Welcome to psyplot!"
+        title += "\n" + "-" * len(title) + "\n\n"
+        self.show_rst(title + text, "intro")

+

+
+
+
+

+[docs]
+class TextHelp(QFrame, HelpMixin):
+    """Class to show plain text rst docstrings"""
+
+    def __init__(self, *args, **kwargs):
+        super(TextHelp, self).__init__(*args, **kwargs)
+        self.vbox = QVBoxLayout()
+        self.vbox.setContentsMargins(0, 0, 0, 0)
+        #: The :class:`PyQt5.QtWidgets.QPlainTextEdit` instance used for
+        #: displaying the documentation
+        self.editor = QPlainTextEdit(parent=self)
+        self.editor.setFont(QtGui.QFont("Courier New"))
+        self.vbox.addWidget(self.editor)
+        self.setLayout(self.vbox)
+
+

+[docs]
+    def show_rst(self, text, *args, **kwargs):
+        """Show the given text in the editor window
+
+        Parameters
+        ----------
+        text: str
+            The text to show
+        ``*args,**kwargs``
+            Are ignored"""
+        self.editor.clear()
+        self.editor.insertPlainText(text)
+        return True

+

+
+
+
+

+[docs]
+class UrlHelp(UrlBrowser, HelpMixin):
+    """Class to convert rst docstrings to html and show browsers"""
+
+    #: Object containing the necessary fields to describe an object given to
+    #: the help widget. The descriptor is set up by the :meth:`describe_object`
+    #: method and contains an additional objtype attribute
+    object_descriptor = namedtuple(
+        "ObjectDescriptor", ["obj", "name", "objtype"]
+    )
+
+    can_document_object = with_sphinx
+    can_show_rst = with_sphinx
+
+    #: menu button with different urls
+    bt_url_menus = None
+
+    #:
+    sphinx_thread = None
+
+    def __init__(self, *args, **kwargs):
+        self._temp_dir = "sphinx_dir" not in kwargs
+        self.sphinx_dir = kwargs.pop("sphinx_dir", mkdtemp(prefix="psyplot_"))
+        self.build_dir = osp.join(self.sphinx_dir, "_build", "html")
+        super(UrlHelp, self).__init__(*args, **kwargs)
+
+        self.error_msg = PyErrorMessage(self)
+        if with_sphinx:
+            self.sphinx_thread = SphinxThread(self.sphinx_dir)
+            self.sphinx_thread.html_ready[str].connect(self.browse)
+            self.sphinx_thread.html_error[str].connect(
+                self.error_msg.showTraceback
+            )
+            self.sphinx_thread.html_error[str].connect(logger.debug)
+            rcParams.connect(
+                "help_explorer.render_docs_parallel", self.reset_sphinx
+            )
+            rcParams.connect(
+                "help_explorer.use_intersphinx", self.reset_sphinx
+            )
+            rcParams.connect("help_explorer.online", self.reset_sphinx)
+
+        self.bt_connect_console = QToolButton(self)
+        self.bt_connect_console.setCheckable(True)
+        if rcParams["console.connect_to_help"]:
+            self.bt_connect_console.setIcon(
+                QIcon(get_icon("ipython_console.png"))
+            )
+            self.bt_connect_console.click()
+        else:
+            self.bt_connect_console.setIcon(
+                QIcon(get_icon("ipython_console_t.png"))
+            )
+        self.bt_connect_console.clicked.connect(self.toogle_connect_console)
+        rcParams.connect(
+            "console.connect_to_help", self.update_connect_console
+        )
+        self.toogle_connect_console()
+
+        # menu button with different urls
+        self.bt_url_menus = QToolButton(self)
+        self.bt_url_menus.setIcon(QIcon(get_icon("docu_button.png")))
+        self.bt_url_menus.setToolTip("Browse documentations")
+        self.bt_url_menus.setPopupMode(QToolButton.InstantPopup)
+
+        docu_menu = QMenu(self)
+        for name, url in six.iteritems(self.doc_urls):
+
+            def to_url(b, url=url):
+                self.browse(url)
+
+            action = QAction(name, self)
+            action.triggered.connect(to_url)
+            docu_menu.addAction(action)
+        self.bt_url_menus.setMenu(docu_menu)
+
+        self.button_box.addWidget(self.bt_connect_console)
+        self.button_box.addWidget(self.bt_url_menus)
+        # toogle the lock again to set the bt_url_menus enabled state
+        self.toogle_url_lock()
+
+

+[docs]
+    def update_connect_console(self, connect):
+        if (
+            connect
+            and not self.bt_connect_console.isChecked()
+            or not connect
+            and self.bt_connect_console.isChecked()
+        ):
+            self.bt_connect_console.click()

+
+
+

+[docs]
+    def toogle_connect_console(self):
+        """Disable (or enable) the loading of web pages in www"""
+        bt = self.bt_connect_console
+        connect = bt.isChecked()
+        bt.setIcon(
+            QIcon(
+                get_icon(
+                    "ipython_console.png"
+                    if connect
+                    else "ipython_console_t.png"
+                )
+            )
+        )
+        bt.setToolTip(
+            "%sonnect the console to the help explorer"
+            % ("Don't c" if connect else "C")
+        )
+        if rcParams["console.connect_to_help"] is not connect:
+            rcParams["console.connect_to_help"] = connect

+
+
+

+[docs]
+    def reset_sphinx(self, value):
+        """Method that is called if the configuration changes"""
+        if with_sphinx and hasattr(self.sphinx_thread, "app"):
+            del self.sphinx_thread.app

+
+
+

+[docs]
+    @docstrings.dedent
+    def show_help(self, obj, oname="", files=None):
+        """
+        Render the rst docu for the given object with sphinx and show it
+
+        Parameters
+        ----------
+        %(HelpMixin.show_help.parameters)s
+        """
+        if self.bt_lock.isChecked():
+            return
+        return super(UrlHelp, self).show_help(obj, oname=oname, files=files)

+
+
+

+[docs]
+    @docstrings.dedent
+    def show_intro(self, text=""):
+        """
+        Show the intro text in the explorer
+
+        Parameters
+        ----------
+        %(HelpMixin.show_intro.parameters)s"""
+        if self.sphinx_thread is not None:
+            with open(self.sphinx_thread.index_file, "a") as f:
+                f.write(
+                    "\n" + text.strip() + "\n\n" + "Table of Contents\n"
+                    "=================\n\n.. toctree::\n"
+                )
+            self.sphinx_thread.render(None, None)

+
+
+

+[docs]
+    def show_rst(self, text, oname="", descriptor=None, files=None):
+        """Render restructured text with sphinx and show it
+
+        Parameters
+        ----------
+        %(HelpMixin.show_rst.parameters)s"""
+        if self.bt_lock.isChecked() or self.sphinx_thread is None:
+            return False
+        if not oname and descriptor:
+            oname = descriptor.name
+        for f in files or []:
+            shutil.copyfile(f, osp.join(self.sphinx_dir, osp.basename(f)))
+        self.sphinx_thread.render(text, oname)
+        return True

+
+
+

+[docs]
+    def describe_object(self, obj, oname=""):
+        """Describe an object using additionaly the object type from the
+        :meth:`get_objtype` method
+
+        Returns
+        -------
+        instance of :attr:`object_descriptor`
+            The descriptor of the object"""
+        return self.object_descriptor(obj, oname, self.get_objtype(obj))

+
+
+

+[docs]
+    def browse(self, url):
+        """Reimplemented to add file paths to the url string"""
+        url = asstring(url)
+        html_file = osp.join(self.sphinx_dir, "_build", "html", url + ".html")
+        if osp.exists(html_file):
+            url = file2html(html_file)
+        super(UrlHelp, self).browse(url)

+
+
+

+[docs]
+    def toogle_url_lock(self):
+        """Disable (or enable) the loading of web pages in www"""
+        super(UrlHelp, self).toogle_url_lock()
+        # enable or disable documentation button
+        bt = self.bt_url_lock
+        offline = bt.isChecked()
+        try:
+            self.bt_url_menus.setEnabled(not offline)
+        except AttributeError:  # not yet initialized
+            pass

+
+
+

+[docs]
+    def url_changed(self, url):
+        """Reimplemented to remove file paths from the url string"""
+        try:
+            url = asstring(url.toString())
+        except AttributeError:
+            pass
+        if url.startswith("file://"):
+            fname = html2file(url)
+            if osp.samefile(
+                self.build_dir, osp.commonprefix([fname, self.build_dir])
+            ):
+                url = osp.splitext(osp.basename(fname))[0]
+        super(UrlHelp, self).url_changed(url)

+
+
+

+[docs]
+    def header(self, descriptor, sig):
+        return "%(name)s\n%(bars)s\n\n.. py:%(type)s:: %(name)s%(sig)s\n" % {
+            "name": descriptor.name,
+            "bars": "-" * len(descriptor.name),
+            "type": descriptor.objtype,
+            "sig": sig,
+        }

+
+
+

+[docs]
+    def get_objtype(self, obj):
+        """Get the object type of the given object and determine wheter the
+        object is considered a class, a module, a function, method or data
+
+        Parameters
+        ----------
+        obj: object
+
+        Returns
+        -------
+        str
+            One out of {'class', 'module', 'function', 'method', 'data'}"""
+        if inspect.isclass(obj):
+            return "class"
+        if inspect.ismodule(obj):
+            return "module"
+        if inspect.isfunction(obj) or isinstance(obj, type(all)):
+            return "function"
+        if inspect.ismethod(obj) or isinstance(obj, type(str.upper)):
+            return "method"
+        return "data"

+
+
+

+[docs]
+    def is_importable(self, modname):
+        """Determine whether members of the given module can be documented with
+        sphinx by using the :func:`sphinx.util.get_module_source` function
+
+        Parameters
+        ----------
+        modname: str
+            The __name__ attribute of the module to import
+
+        Returns
+        -------
+        bool
+            True if sphinx can import the module"""
+        try:
+            ModuleAnalyzer.get_module_source(modname)
+            return True
+        except Exception:
+            return False

+
+
+

+[docs]
+    def get_doc(self, descriptor):
+        """Reimplemented to (potentially) use the features from
+        sphinx.ext.autodoc"""
+        obj = descriptor.obj
+        if inspect.ismodule(obj):
+            module = obj
+        else:
+            module = inspect.getmodule(obj)
+        if module is not None and (
+            re.match("__.*__", module.__name__)
+            or not self.is_importable(module.__name__)
+        ):
+            module = None
+        isclass = inspect.isclass(obj)
+        # If the module is available, we try to use autodoc
+        if module is not None:
+            doc = ".. currentmodule:: " + module.__name__ + "\n\n"
+            # a module --> use automodule
+            if inspect.ismodule(obj):
+                doc += self.header(descriptor, "")
+                doc += ".. automodule:: " + obj.__name__
+            # an importable class --> use autoclass
+            elif isclass and getattr(module, obj.__name__, None) is not None:
+                doc += self.header(descriptor, "")
+                doc += ".. autoclass:: " + obj.__name__
+            # an instance and the class can be imported
+            # --> use super get_doc and autoclass for the tyoe
+            elif (
+                descriptor.objtype == "data"
+                and getattr(module, type(obj).__name__, None) is not None
+            ):
+                doc += "\n\n".join(
+                    [
+                        super(UrlHelp, self).get_doc(descriptor),
+                        "Class docstring\n===============",
+                        ".. autoclass:: " + type(obj).__name__,
+                    ]
+                )
+            # an instance --> use super get_doc for instance and the type
+            elif descriptor.objtype == "data":
+                cls_doc = super(UrlHelp, self).get_doc(
+                    self.describe_object(type(obj), type(obj).__name__)
+                )
+                doc += "\n\n".join(
+                    [
+                        super(UrlHelp, self).get_doc(descriptor),
+                        "Class docstring\n===============",
+                        cls_doc,
+                    ]
+                )
+            # a function or method --> use super get_doc
+            else:
+                doc += super(UrlHelp, self).get_doc(descriptor)
+        # otherwise the object has been defined in this session
+        else:
+            # an instance --> use super get_doc for instance and the type
+            if descriptor.objtype == "data":
+                cls_doc = super(UrlHelp, self).get_doc(
+                    self.describe_object(type(obj), type(obj).__name__)
+                )
+                doc = "\n\n".join(
+                    [
+                        super(UrlHelp, self).get_doc(descriptor),
+                        "Class docstring\n===============",
+                        cls_doc,
+                    ]
+                )
+            # a function or method --> use super get_doc
+            else:
+                doc = super(UrlHelp, self).get_doc(descriptor)
+        return doc.rstrip() + "\n"

+
+
+

+[docs]
+    def process_docstring(self, lines, descriptor):
+        """Process the lines with the napoleon sphinx extension"""
+        lines = list(chain(*(line.splitlines() for line in lines)))
+        lines = NumpyDocstring(
+            lines,
+            what=descriptor.objtype,
+            name=descriptor.name,
+            obj=descriptor.obj,
+        ).lines()
+        lines = GoogleDocstring(
+            lines,
+            what=descriptor.objtype,
+            name=descriptor.name,
+            obj=descriptor.obj,
+        ).lines()
+        return indent(
+            super(UrlHelp, self).process_docstring(lines, descriptor)
+        )

+
+
+

+[docs]
+    def close(self, *args, **kwargs):
+        if kwargs.pop("force", False) or (
+            not is_running_tests() and self.sphinx_thread is not None
+        ):
+            try:
+                del self.sphinx_thread.app
+            except AttributeError:
+                pass
+            shutil.rmtree(self.build_dir, ignore_errors=True)
+            if self._temp_dir:
+                shutil.rmtree(self.sphinx_dir, ignore_errors=True)
+            del self.sphinx_thread
+            return super(UrlHelp, self).close(*args, **kwargs)
+        elif is_running_tests():
+            self.bt_url_lock.setChecked(self.bt_url_lock_default)
+            self.bt_lock.setChecked(self.bt_lock_default)
+        else:
+            return super(UrlHelp, self).close(*args, **kwargs)

+

+
+
+
+

+[docs]
+class SphinxThread(QtCore.QThread):
+    """A thread to render sphinx documentation in a separate process"""
+
+    #: A signal to be emitted when the rendering finished. The url is the
+    #: file location
+    html_ready = QtCore.pyqtSignal(str)
+    html_error = QtCore.pyqtSignal(str)
+
+    def __init__(self, outdir, html_text_no_doc=""):
+        super(SphinxThread, self).__init__()
+        self.doc = None
+        self.name = None
+        self.html_text_no_doc = html_text_no_doc
+        self.outdir = outdir
+        self.index_file = osp.join(self.outdir, "psyplot.rst")
+        self.confdir = osp.join(get_module_path(__name__), "sphinx_supp")
+        shutil.copyfile(
+            osp.join(self.confdir, "psyplot.rst"),
+            osp.join(self.outdir, "psyplot.rst"),
+        )
+        self.build_dir = osp.join(self.outdir, "_build", "html")
+
+

+[docs]
+    def render(self, doc, name):
+        """Render the given rst string and save the file as ``name + '.rst'``
+
+        Parameters
+        ----------
+        doc: str
+            The rst docstring
+        name: str
+            the name to use for the file"""
+        if self.wait():
+            self.doc = doc
+            self.name = name
+            # start rendering in separate process
+            if rcParams["help_explorer.render_docs_parallel"]:
+                self.start()
+            else:
+                self.run()

+
+
+

+[docs]
+    def run(self):
+        """Create the html file. When called the first time, it may take a
+        while because the :class:`sphinx.application.Sphinx` app is build,
+        potentially with intersphinx
+
+        When finished, the html_ready signal is emitted"""
+        if not hasattr(self, "app"):
+            from IPython.core.history import HistoryAccessor
+
+            # to avoid history access conflicts between different threads,
+            # we disable the ipython history
+            HistoryAccessor.enabled.default_value = False
+            self.app = Sphinx(
+                self.outdir,
+                self.confdir,
+                self.build_dir,
+                osp.join(self.outdir, "_build", "doctrees"),
+                "html",
+                status=StreamToLogger(logger, logging.DEBUG),
+                warning=StreamToLogger(logger, logging.DEBUG),
+            )
+        if self.name is not None:
+            docfile = osp.abspath(osp.join(self.outdir, self.name + ".rst"))
+            if docfile == self.index_file:
+                self.name += "1"
+                docfile = osp.abspath(
+                    osp.join(self.outdir, self.name + ".rst")
+                )
+            html_file = osp.abspath(
+                osp.join(self.outdir, "_build", "html", self.name + ".html")
+            )
+            if not osp.exists(docfile):
+                with open(self.index_file, "a") as f:
+                    f.write("\n    " + self.name)
+            with open(docfile, "w") as f:
+                f.write(self.doc)
+        else:
+            html_file = osp.abspath(
+                osp.join(self.outdir, "_build", "html", "psyplot.html")
+            )
+        try:
+            self.app.build(None, [])
+        except Exception:
+            msg = "Error while building sphinx document %s" % (self.name)
+            self.html_error.emit("<b>" + msg + "</b>")
+            logger.debug(msg)
+        else:
+            self.html_ready.emit(file2html(html_file))

+

+
+
+
+

+[docs]
+class HelpExplorer(QWidget, DockMixin):
+    """A widget for showing the documentation. It behaves somewhat similar
+    to spyders object inspector plugin and can show restructured text either
+    as html (if sphinx is installed) or as plain text. It furthermore has a
+    browser to show html content
+
+    Warnings
+    --------
+    The :class:`HelpBrowser` class is known to crash under PyQt4 when new web
+    page domains are loaded. Hence you should disable the browsing to different
+    remote websites and even disable intersphinx"""
+
+    #: The viewer classes used by the help explorer. :class:`HelpExplorer`
+    #: instances replace this attribute with the corresponding HelpMixin
+    #: instance
+    viewers = dict([("HTML help", UrlHelp), ("Plain text", TextHelp)])
+
+    if not rcParams["help_explorer.use_webengineview"]:
+        del viewers["HTML help"]
+
+    def __init__(self, *args, **kwargs):
+        super(HelpExplorer, self).__init__(*args, **kwargs)
+        self.vbox = vbox = QVBoxLayout()
+        self.combo = QComboBox(parent=self)
+        vbox.addWidget(self.combo)
+        if _viewers:
+            self.viewers = _viewers.copy()
+            for w in self.viewers.values():
+                w.setParent(self)
+        else:
+            self.viewers = dict(
+                [
+                    (key, cls(parent=self))
+                    for key, cls in six.iteritems(self.viewers)
+                ]
+            )
+            # save the UrlHelp because QWebEngineView creates child processes
+            # that are not properly closed by PyQt and as such use too much
+            # memory
+            if is_running_tests():
+                for key, val in self.viewers.items():
+                    _viewers[key] = val
+        for key, ini in six.iteritems(self.viewers):
+            self.combo.addItem(key)
+            ini.hide()
+            vbox.addWidget(ini)
+        self.viewer = next(six.itervalues(self.viewers))
+        self.viewer.show()
+        self.combo.currentIndexChanged[str].connect(self.set_viewer)
+        self.setLayout(vbox)
+
+

+[docs]
+    def set_viewer(self, name):
+        """Sets the current documentation viewer
+
+        Parameters
+        ----------
+        name: str or object
+            A string must be one of the :attr:`viewers` attribute. An object
+            can be one of the values in the :attr:`viewers` attribute"""
+        if isstring(name) and asstring(name) not in self.viewers:
+            raise ValueError("Don't have a viewer named %s" % (name,))
+        elif not isstring(name):
+            viewer = name
+        else:
+            name = asstring(name)
+            viewer = self.viewers[name]
+        self.viewer.hide()
+        self.viewer = viewer
+        self.viewer.show()
+        if isstring(name) and not self.combo.currentText() == name:
+            self.combo.setCurrentIndex(list(self.viewers).index(name))

+
+
+

+[docs]
+    @docstrings.dedent
+    def show_help(self, obj, oname="", files=None):
+        """
+        Show the documentaion of the given object
+
+        We first try to use the current viewer based upon it's
+        :attr:`HelpMixin.can_document_object` attribute. If this does not work,
+        we check the other viewers
+
+        Parameters
+        ----------
+        %(HelpMixin.show_help.parameters)s"""
+        oname = asstring(oname)
+        ret = None
+        if self.viewer.can_document_object:
+            try:
+                ret = self.viewer.show_help(obj, oname=oname, files=files)
+            except Exception:
+                logger.debug(
+                    "Could not document %s with %s viewer!",
+                    oname,
+                    self.combo.currentText(),
+                    exc_info=True,
+                )
+        else:
+            curr_i = self.combo.currentIndex()
+            for i, (viewername, viewer) in enumerate(
+                six.iteritems(self.viewers)
+            ):
+                if i != curr_i and viewer.can_document_object:
+                    self.set_viewer(viewername)
+                    self.combo.blockSignals(True)
+                    self.combo.setCurrentIndex(i)
+                    self.combo.blockSignals(False)
+                    try:
+                        ret = viewer.show_help(obj, oname=oname, files=files)
+                    except Exception:
+                        logger.debug(
+                            "Could not document %s with %s viewer!",
+                            oname,
+                            viewername,
+                            exc_info=True,
+                        )
+        if ret:
+            self.parent().raise_()
+        return ret

+
+
+

+[docs]
+    @docstrings.dedent
+    def show_rst(self, text, oname="", files=None):
+        """
+        Show restructured text
+
+        We first try to use the current viewer based upon it's
+        :attr:`HelpMixin.can_show_rst` attribute. If this does not work,
+        we check the other viewers
+
+        Parameters
+        ----------
+        %(HelpMixin.show_rst.parameters)s"""
+        ret = None
+        if self.viewer.can_show_rst:
+            ret = self.viewer.show_rst(text, oname=oname, files=files)
+        else:
+            for viewer in six.itervalues(self.viewers):
+                if viewer.can_show_rst:
+                    self.set_viewer(viewer)
+                    ret = viewer.show_rst(text, oname=oname, files=files)
+                    break
+        if ret:
+            self.parent().raise_()
+        return ret

+
+
+

+[docs]
+    @docstrings.dedent
+    def show_intro(self, text=""):
+        """
+        Show an intro text
+
+        We first try to use the current viewer based upon it's
+        :attr:`HelpMixin.can_show_rst` attribute. If this does not work,
+        we check the other viewers
+
+        Parameters
+        ----------
+        %(HelpMixin.show_intro.parameters)s"""
+        found = False
+        for i, viewer in enumerate(six.itervalues(self.viewers)):
+            viewer.show_intro(text)
+            if not found and viewer.can_show_rst:
+                if i:
+                    self.set_viewer(viewer)
+                found = True

+
+
+

+[docs]
+    def close(self, *args, **kwargs):
+        try:
+            self.viewers["HTML help"].close(*args, **kwargs)
+        except (KeyError, AttributeError):
+            pass
+        return super(HelpExplorer, self).close(*args, **kwargs)

+

+
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/main.html b/_modules/psyplot_gui/main.html new file mode 100644 index 0000000..f5837df --- /dev/null +++ b/_modules/psyplot_gui/main.html @@ -0,0 +1,1655 @@ + + + + + + psyplot_gui.main — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.main

+"""Core module for the psyplot graphical user interface
+
+This module redefines the :class:`psyplot.project.Project` class with
+additional features for an interactive usage with graphical qt user interface.
+There is no need to import this module because the
+:class:`GuiProject` class defined here replaces the project class in the
+:mod:`psyplot.project` module."""
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+import errno
+import logging
+import os
+import pickle
+import socket
+import sys
+from collections import OrderedDict, defaultdict
+from functools import partial
+from threading import Thread
+
+import matplotlib as mpl
+import psyplot
+import psyplot.data as psyd
+import psyplot.plotter as psyp
+import psyplot.project as psy
+import six
+import xarray as xr
+from psyplot.config.rcsetup import get_configdir
+from psyplot.docstring import docstrings
+from psyplot.utils import get_default_value
+
+import psyplot_gui
+from psyplot_gui import rcParams
+from psyplot_gui.common import PyErrorMessage, StreamToLogger, get_icon
+from psyplot_gui.compat.qtcompat import (
+    QAction,
+    QActionGroup,
+    QApplication,
+    QDesktopWidget,
+    QFileDialog,
+    QIcon,
+    QInputDialog,
+    QKeySequence,
+    QLabel,
+    QMainWindow,
+    QMenu,
+    QMessageBox,
+    Qt,
+    QtCore,
+    with_qt5,
+)
+from psyplot_gui.console import ConsoleWidget
+from psyplot_gui.content_widget import (
+    DatasetTree,
+    FiguresTree,
+    ProjectContentWidget,
+)
+from psyplot_gui.dataframeeditor import DataFrameEditor
+from psyplot_gui.dependencies import DependenciesDialog
+from psyplot_gui.fmt_widget import FormatoptionWidget
+from psyplot_gui.help_explorer import HelpExplorer
+from psyplot_gui.plot_creator import PlotCreator
+from psyplot_gui.preferences import (
+    GuiRcParamsWidget,
+    Prefences,
+    PsyRcParamsWidget,
+)
+
+# change backend here before the project module is imported
+backend = rcParams["backend"]
+if backend is not None:
+    if backend == "psyplot":
+        backend = "module://psyplot_gui.backend"
+    mpl.use(backend)
+
+
+#: The :class:`PyQt5.QtWidgets.QMainWindow` of the graphical user interface
+mainwindow = None
+
+
+def _set_mainwindow(obj):
+    global mainwindow
+    mainwindow = obj
+
+
+

+[docs]
+class MainWindow(QMainWindow):
+    #: A signal that is emmitted when the a signal is received through the
+    #: open_files_server
+    open_external = QtCore.pyqtSignal(list)
+
+    #: The server to open external files
+    open_files_server = None
+
+    #: Inprocess console
+    console = None
+
+    #: tree widget displaying the open datasets
+    ds_tree = None
+
+    #: list of figures from the psyplot backend
+    figures = []
+
+    #: tree widget displaying the open figures
+    figures_tree = None
+
+    #: general formatoptions widget
+    fmt_widget = None
+
+    #: help explorer
+    help_explorer = None
+
+    #: the DataFrameEditor widgets, a widget to show and edit data frames
+    dataframeeditors = None
+
+    #: tab widget displaying the arrays in current main and sub project
+    project_content = None
+
+    #: The dockwidgets of this instance
+    dockwidgets = []
+
+    #: default widths of the dock widgets
+    default_widths = {}
+
+    _is_open = False
+
+    #: The keyboard shortcuts of the default layout
+    default_shortcuts = []
+
+    #: The current keyboard shortcuts
+    current_shortcuts = []
+
+    #: The key for the central widget for the main window in the
+    #: :attr:`plugins` dictionary
+    central_widget_key = "console"
+
+    @property
+    def logger(self):
+        """The logger of this instance"""
+        return logging.getLogger(
+            "%s.%s" % (self.__class__.__module__, self.__class__.__name__)
+        )
+
+    @docstrings.get_sections(base="MainWindow")
+    @docstrings.dedent
+    def __init__(self, show=True):
+        """
+        Parameters
+        ----------
+        show: bool
+            If True, the created mainwindow is show
+        """
+        if sys.stdout is None:
+            sys.stdout = StreamToLogger(self.logger)
+        if sys.stderr is None:
+            sys.stderr = StreamToLogger(self.logger)
+        super(MainWindow, self).__init__()
+        self.setWindowIcon(QIcon(get_icon("logo.png")))
+
+        #: list of figures from the psyplot backend
+        self.figures = []
+        self.error_msg = PyErrorMessage(self)
+        self.setDockOptions(
+            QMainWindow.AnimatedDocks
+            | QMainWindow.AllowNestedDocks
+            | QMainWindow.AllowTabbedDocks
+        )
+        #: Inprocess console
+        self.console = ConsoleWidget(self)
+        self.project_actions = {}
+
+        self.config_pages = []
+
+        self.open_file_options = OrderedDict(
+            [
+                ("new psyplot plot from dataset", self.open_external_files),
+                ("new psyplot project", partial(self.open_external_files, [])),
+            ]
+        )
+
+        # ---------------------------------------------------------------------
+        # ----------------------------- Menus ---------------------------------
+        # ---------------------------------------------------------------------
+
+        # ######################## File menu ##################################
+
+        # --------------------------- New plot --------------------------------
+
+        self.file_menu = QMenu("File", parent=self)
+        self.new_plot_action = QAction("New plot", self)
+        self.new_plot_action.setStatusTip(
+            "Use an existing dataset (or open a new one) to create one or "
+            "more plots"
+        )
+        self.register_shortcut(self.new_plot_action, QKeySequence.New)
+        self.new_plot_action.triggered.connect(lambda: self.new_plots(True))
+        self.file_menu.addAction(self.new_plot_action)
+
+        # --------------------------- Open project ----------------------------
+
+        self.open_project_menu = QMenu("Open project", self)
+        self.file_menu.addMenu(self.open_project_menu)
+
+        self.open_mp_action = QAction("New main project", self)
+        self.register_shortcut(self.open_mp_action, QKeySequence.Open)
+        self.open_mp_action.setStatusTip("Open a new main project")
+        self.open_mp_action.triggered.connect(self.open_mp)
+        self.open_project_menu.addAction(self.open_mp_action)
+
+        self.open_sp_action = QAction("Add to current", self)
+
+        self.register_shortcut(
+            self.open_sp_action,
+            QKeySequence("Ctrl+Shift+O", QKeySequence.NativeText),
+        )
+        self.open_sp_action.setStatusTip(
+            "Load a project as a sub project and add it to the current main "
+            "project"
+        )
+        self.open_sp_action.triggered.connect(self.open_sp)
+        self.open_project_menu.addAction(self.open_sp_action)
+
+        # ---------------------- load preset menu -----------------------------
+
+        self.load_preset_menu = QMenu("Load preset", parent=self)
+        self.file_menu.addMenu(self.load_preset_menu)
+
+        self.load_sp_preset_action = self.load_preset_menu.addAction(
+            "For selection", self.load_sp_preset
+        )
+        self.load_sp_preset_action.setStatusTip(
+            "Load a preset for the selected project"
+        )
+
+        self.load_mp_preset_action = self.load_preset_menu.addAction(
+            "For full project", self.load_mp_preset
+        )
+        self.load_sp_preset_action.setStatusTip(
+            "Load a preset for the full project"
+        )
+
+        # ----------------------- Save project --------------------------------
+
+        self.save_project_menu = QMenu("Save", parent=self)
+        self.file_menu.addMenu(self.save_project_menu)
+
+        self.save_mp_action = QAction("Full psyplot project", self)
+        self.save_mp_action.setStatusTip(
+            "Save the entire project into a pickle file"
+        )
+        self.register_shortcut(self.save_mp_action, QKeySequence.Save)
+        self.save_mp_action.triggered.connect(self.save_mp)
+        self.save_project_menu.addAction(self.save_mp_action)
+
+        self.save_sp_action = QAction("Selected psyplot project", self)
+        self.save_sp_action.setStatusTip(
+            "Save the selected sub project into a pickle file"
+        )
+        self.save_sp_action.triggered.connect(self.save_sp)
+        self.save_project_menu.addAction(self.save_sp_action)
+
+        # ------------------------ Save project as ----------------------------
+
+        self.save_project_as_menu = QMenu("Save as", parent=self)
+        self.file_menu.addMenu(self.save_project_as_menu)
+
+        self.save_mp_as_action = QAction("Full psyplot project", self)
+        self.save_mp_as_action.setStatusTip(
+            "Save the entire project into a pickle file"
+        )
+        self.register_shortcut(self.save_mp_as_action, QKeySequence.SaveAs)
+        self.save_mp_as_action.triggered.connect(
+            partial(self.save_mp, new_fname=True)
+        )
+        self.save_project_as_menu.addAction(self.save_mp_as_action)
+
+        self.save_sp_as_action = QAction("Selected psyplot project", self)
+        self.save_sp_as_action.setStatusTip(
+            "Save the selected sub project into a pickle file"
+        )
+        self.save_sp_as_action.triggered.connect(
+            partial(self.save_sp, new_fname=True)
+        )
+        self.save_project_as_menu.addAction(self.save_sp_as_action)
+
+        # ------------------------ Save preset --------------------------------
+
+        self.save_preset_menu = QMenu("Save preset", parent=self)
+        self.file_menu.addMenu(self.save_preset_menu)
+
+        self.save_sp_preset_action = self.save_preset_menu.addAction(
+            "Selection", self.save_sp_preset
+        )
+        self.save_sp_preset_action.setStatusTip(
+            "Save the formatoptions of the selected project as a preset"
+        )
+
+        self.save_mp_preset_action = self.save_preset_menu.addAction(
+            "Full project", self.save_mp_preset
+        )
+        self.save_sp_preset_action.setStatusTip(
+            "Save the formatoptions of the full project as a preset"
+        )
+
+        # -------------------------- Pack project -----------------------------
+
+        self.pack_project_menu = QMenu("Zip project files", parent=self)
+        self.file_menu.addMenu(self.pack_project_menu)
+
+        self.pack_mp_action = QAction("Full psyplot project", self)
+        self.pack_mp_action.setStatusTip(
+            "Pack all the data of the main project into one folder"
+        )
+        self.pack_mp_action.triggered.connect(partial(self.save_mp, pack=True))
+        self.pack_project_menu.addAction(self.pack_mp_action)
+
+        self.pack_sp_action = QAction("Selected psyplot project", self)
+        self.pack_sp_action.setStatusTip(
+            "Pack all the data of the current sub project into one folder"
+        )
+        self.pack_sp_action.triggered.connect(partial(self.save_sp, pack=True))
+        self.pack_project_menu.addAction(self.pack_sp_action)
+
+        # ------------------------ Export figures -----------------------------
+
+        self.export_project_menu = QMenu("Export figures", parent=self)
+        self.file_menu.addMenu(self.export_project_menu)
+
+        self.export_mp_action = QAction("Full psyplot project", self)
+        self.export_mp_action.setStatusTip(
+            "Pack all the data of the main project into one folder"
+        )
+        self.export_mp_action.triggered.connect(self.export_mp)
+        self.register_shortcut(
+            self.export_mp_action,
+            QKeySequence("Ctrl+E", QKeySequence.NativeText),
+        )
+        self.export_project_menu.addAction(self.export_mp_action)
+
+        self.export_sp_action = QAction("Selected psyplot project", self)
+        self.export_sp_action.setStatusTip(
+            "Pack all the data of the current sub project into one folder"
+        )
+        self.register_shortcut(
+            self.export_sp_action,
+            QKeySequence("Ctrl+Shift+E", QKeySequence.NativeText),
+        )
+        self.export_sp_action.triggered.connect(self.export_sp)
+        self.export_project_menu.addAction(self.export_sp_action)
+
+        # ------------------------ Close project ------------------------------
+
+        self.file_menu.addSeparator()
+
+        self.close_project_menu = QMenu("Close project", parent=self)
+        self.file_menu.addMenu(self.close_project_menu)
+
+        self.close_mp_action = QAction("Full psyplot project", self)
+        self.register_shortcut(
+            self.close_mp_action,
+            QKeySequence("Ctrl+Shift+W", QKeySequence.NativeText),
+        )
+        self.close_mp_action.setStatusTip(
+            "Close the main project and delete all data and plots out of "
+            "memory"
+        )
+        self.close_mp_action.triggered.connect(
+            lambda: psy.close(psy.gcp(True).num)
+        )
+        self.close_project_menu.addAction(self.close_mp_action)
+
+        self.close_sp_action = QAction("Selected psyplot project", self)
+        self.close_sp_action.setStatusTip(
+            "Close the selected arrays project and delete all data and plots "
+            "out of memory"
+        )
+        self.register_shortcut(self.close_sp_action, QKeySequence.Close)
+        self.close_sp_action.triggered.connect(
+            lambda: psy.gcp().close(True, True)
+        )
+        self.close_project_menu.addAction(self.close_sp_action)
+
+        # ----------------------------- Quit ----------------------------------
+
+        if sys.platform != "darwin":  # mac os makes this anyway
+            self.quit_action = QAction("Quit", self)
+            self.quit_action.triggered.connect(self.close)
+            self.quit_action.triggered.connect(
+                QtCore.QCoreApplication.instance().quit
+            )
+            self.register_shortcut(self.quit_action, QKeySequence.Quit)
+            self.file_menu.addAction(self.quit_action)
+
+        self.menuBar().addMenu(self.file_menu)
+
+        # ######################## Console menu ###############################
+
+        self.console_menu = QMenu("Console", self)
+        self.console_menu.addActions(self.console.actions())
+        self.menuBar().addMenu(self.console_menu)
+
+        # ######################## Windows menu ###############################
+
+        self.windows_menu = QMenu("Windows", self)
+        self.menuBar().addMenu(self.windows_menu)
+
+        # ############################ Help menu ##############################
+
+        self.help_menu = QMenu("Help", parent=self)
+        self.menuBar().addMenu(self.help_menu)
+
+        # -------------------------- Preferences ------------------------------
+
+        self.help_action = QAction("Preferences", self)
+        self.help_action.triggered.connect(lambda: self.edit_preferences(True))
+        self.register_shortcut(self.help_action, QKeySequence.Preferences)
+        self.help_menu.addAction(self.help_action)
+
+        # ---------------------------- About ----------------------------------
+
+        self.about_action = QAction("About", self)
+        self.about_action.triggered.connect(self.about)
+        self.help_menu.addAction(self.about_action)
+
+        # ---------------------------- Dependencies ---------------------------
+
+        self.dependencies_action = QAction("Dependencies", self)
+        self.dependencies_action.triggered.connect(
+            lambda: self.show_dependencies(True)
+        )
+        self.help_menu.addAction(self.dependencies_action)
+
+        self.dockwidgets = []
+
+        # ---------------------------------------------------------------------
+        # -------------------------- Dock windows -----------------------------
+        # ---------------------------------------------------------------------
+        #: tab widget displaying the arrays in current main and sub project
+        #: tree widget displaying the open datasets
+        self.project_content = ProjectContentWidget(parent=self)
+        self.ds_tree = DatasetTree(parent=self)
+        #: tree widget displaying the open figures
+        self.figures_tree = FiguresTree(parent=self)
+        #: help explorer
+        self.help_explorer = help_explorer = HelpExplorer(parent=self)
+        if (
+            "HTML help" in help_explorer.viewers
+            and help_explorer.viewers["HTML help"].sphinx_thread is not None
+        ):
+            help_explorer.viewers[
+                "HTML help"
+            ].sphinx_thread.html_ready.connect(self.focus_on_console)
+        #: the DataFrameEditor widgets
+        self.dataframeeditors = []
+        #: general formatoptions widget
+        self.fmt_widget = FormatoptionWidget(
+            parent=self, help_explorer=help_explorer, console=self.console
+        )
+
+        # load plugin widgets
+        self.plugins = plugins = OrderedDict(
+            [
+                ("console", self.console),
+                ("project_content", self.project_content),
+                ("ds_tree", self.ds_tree),
+                ("figures_tree", self.figures_tree),
+                ("help_explorer", self.help_explorer),
+                ("fmt_widget", self.fmt_widget),
+            ]
+        )
+        self.default_plugins = list(plugins)
+        for plugin_name, w_class in six.iteritems(rcParams.load_plugins()):
+            plugins[plugin_name] = w_class(parent=self)
+
+        self.add_mp_to_menu()
+        psy.Project.oncpchange.connect(self.eventually_add_mp_to_menu)
+        self.windows_menu.addSeparator()
+
+        self.window_layouts_menu = QMenu("Window layouts", self)
+        self.restore_layout_action = QAction("Restore default layout", self)
+        self.restore_layout_action.triggered.connect(self.setup_default_layout)
+        self.window_layouts_menu.addAction(self.restore_layout_action)
+        self.windows_menu.addMenu(self.window_layouts_menu)
+
+        self.panes_menu = QMenu("Panes", self)
+        self.windows_menu.addMenu(self.panes_menu)
+
+        self.dataframe_menu = QMenu("DataFrame editors", self)
+        self.dataframe_menu.addAction(
+            "New Editor",
+            partial(self.new_data_frame_editor, None, "DataFrame Editor"),
+        )
+        self.dataframe_menu.addSeparator()
+        self.windows_menu.addMenu(self.dataframe_menu)
+
+        self.central_widgets_menu = menu = QMenu("Central widget", self)
+        self.windows_menu.addMenu(menu)
+        self.central_widgets_actions = group = QActionGroup(self)
+        group.setExclusive(True)
+
+        # ---------------------------------------------------------------------
+        # -------------------------- connections ------------------------------
+        # ---------------------------------------------------------------------
+
+        self.console.help_explorer = help_explorer
+        psyp.default_print_func = partial(
+            help_explorer.show_rst, oname="formatoption_docs"
+        )
+        psy.PlotterInterface._print_func = psyp.default_print_func
+        self.setCentralWidget(self.console)
+
+        # make sure that the plots are shown between the project content and
+        # the help explorer widget
+        self.setCorner(Qt.TopLeftCorner, Qt.LeftDockWidgetArea)
+        self.setCorner(Qt.TopRightCorner, Qt.RightDockWidgetArea)
+
+        # make sure that the formatoption widgets are shown between the
+        # project content and the help explorer widget
+        self.setCorner(Qt.BottomLeftCorner, Qt.LeftDockWidgetArea)
+        self.setCorner(Qt.BottomRightCorner, Qt.RightDockWidgetArea)
+
+        # ---------------------------------------------------------------------
+        # ------------------------------ closure ------------------------------
+        # ---------------------------------------------------------------------
+        if show:
+            self.help_explorer.show_intro(self.console.intro_msg)
+
+        # ---------------------------------------------------------------------
+        # ------------------------- open_files_server -------------------------
+        # ---------------------------------------------------------------------
+        self.callbacks = {
+            "new_plot": self.open_external.emit,
+            "change_cwd": self._change_cwd,
+            "run_script": self.console.run_script.emit,
+            "command": self.console.run_command.emit,
+        }
+
+        # Server to open external files on a single instance
+        self.open_files_server = socket.socket(
+            socket.AF_INET, socket.SOCK_STREAM, socket.IPPROTO_TCP
+        )
+
+        if rcParams["main.listen_to_port"]:
+            self._file_thread = Thread(target=self.start_open_files_server)
+            self._file_thread.setDaemon(True)
+            self._file_thread.start()
+
+            self.open_external.connect(self._open_external_files)
+
+        self.config_pages.extend([GuiRcParamsWidget, PsyRcParamsWidget])
+
+        # display the statusBar
+        statusbar = self.statusBar()
+        self.figures_label = QLabel()
+        statusbar.addWidget(self.figures_label)
+        self.plugin_label = QLabel()
+        statusbar.addWidget(self.plugin_label)
+
+        self.default_widths = {}
+
+        self.setup_default_layout()
+
+        if show:
+            self.showMaximized()
+
+        # save the default widths after they have been shown
+        for w in self.plugins.values():
+            if w.dock is not None:
+                self.default_widths[w] = w.dock.size().width()
+
+        # hide plugin widgets that should be hidden at startup. Although this
+        # has been executed by :meth:`setup_default_layout`, we have to execute
+        # it again after the call of showMaximized
+        for name, w in self.plugins.items():
+            if name != self.central_widget_key:
+                w.to_dock(self)
+                if w.hidden:
+                    w.hide_plugin()
+            else:
+                w.create_central_widget_action(self).setChecked(True)
+
+        self._is_open = True
+
+

+[docs]
+    def focus_on_console(self, *args, **kwargs):
+        """Put focus on the ipython console"""
+        self.console._control.setFocus()

+
+
+

+[docs]
+    def new_data_frame_editor(self, df=None, title="DataFrame Editor"):
+        """Open a new dataframe editor
+
+        Parameters
+        ----------
+        df: pandas.DataFrame
+            The dataframe to display
+        title: str
+            The title of the dock window
+
+        Returns
+        -------
+        psyplot_gui.dataframeeditor.DataFrameEditor
+            The newly created editor"""
+        editor = DataFrameEditor()
+        self.dataframeeditors.append(editor)
+        editor.to_dock(self, title, Qt.RightDockWidgetArea, docktype="df")
+        if df is not None:
+            editor.set_df(df)
+        editor.show_plugin()
+        editor.maybe_tabify()
+        editor.raise_()
+        return editor

+
+
+

+[docs]
+    def setup_default_layout(self):
+        """Set up the default window layout"""
+        self.project_content.to_dock(
+            self, "Plot objects", Qt.LeftDockWidgetArea
+        )
+        self.ds_tree.to_dock(self, "Datasets", Qt.LeftDockWidgetArea)
+        self.figures_tree.to_dock(self, "Figures", Qt.LeftDockWidgetArea)
+        self.help_explorer.to_dock(
+            self, "Help explorer", Qt.RightDockWidgetArea
+        )
+        self.fmt_widget.to_dock(self, "Formatoptions", Qt.BottomDockWidgetArea)
+
+        modify_widths = bool(self.default_widths)
+        for w in map(self.plugins.__getitem__, self.default_plugins):
+            if w.dock is not None:
+                w.show_plugin()
+
+                if modify_widths and with_qt5:
+                    self.resizeDocks(
+                        [w.dock], [self.default_widths[w]], Qt.Horizontal
+                    )
+
+        # hide plugin widgets that should be hidden at startup
+        for name, w in self.plugins.items():
+            if name != self.central_widget_key:
+                w.to_dock(self)
+                if w.hidden:
+                    w.hide_plugin()
+
+        action2shortcut = defaultdict(list)
+        for s, a in self.default_shortcuts:
+            action2shortcut[a].append(s)
+
+        for a, s in action2shortcut.items():
+            self.register_shortcut(a, s)

+
+
+

+[docs]
+    def set_central_widget(self, name):
+        """Set the central widget
+
+        Parameters
+        ----------
+        name: str or QWidget
+            The key or the plugin widget in the :attr:`plugins` dictionary"""
+        from PyQt5.QtCore import QTimer
+
+        self.setUpdatesEnabled(False)
+        current = self.centralWidget()
+        if isinstance(name, six.string_types):
+            new = self.plugins[name]
+        else:
+            new = name
+            name = next(key for key, val in self.plugins.items() if val is new)
+        if new is not current:
+            self._dock_widths = dock_widths = OrderedDict()
+            self._dock_heights = dock_heights = OrderedDict()
+            for key, w in self.plugins.items():
+                if w.dock is not None and w.is_shown:
+                    s = w.dock.size()
+                    dock_widths[w] = s.width()
+                    if w is not new:
+                        dock_heights[w] = s.height()
+
+            new_pos = self.dockWidgetArea(new.dock)
+
+            self.removeDockWidget(new.dock)
+            new.dock.close()
+            self.panes_menu.removeAction(new._view_action)
+            self.dataframe_menu.removeAction(new._view_action)
+            new.dock = new._view_action = None
+            self.central_widget_key = name
+            current.to_dock(self)
+            self.setCentralWidget(new)
+            new._set_central_action.setChecked(True)
+            current.show_plugin()
+            current.to_dock(self)
+            new_width = dock_widths.pop(new, None)
+            if current.hidden:
+                current.hide_plugin()
+            else:
+                current_pos = self.dockWidgetArea(current.dock)
+                if current_pos == new_pos and new_width:
+                    dock_widths[current] = new_width
+
+        self._custom_layout_timer = QTimer(self)
+        self._custom_layout_timer.timeout.connect(self._reset_dock_widths)
+        self._custom_layout_timer.setSingleShot(True)
+        self._custom_layout_timer.start(5000)

+
+
+    def _reset_dock_widths(self):
+        # resize the plugins
+        if with_qt5:
+            for w, width in self._dock_widths.items():
+                if w.dock is not None:
+                    self.resizeDocks([w.dock], [width], Qt.Horizontal)
+            for w, height in self._dock_heights.items():
+                if w.dock is not None:
+                    self.resizeDocks([w.dock], [height], Qt.Vertical)
+
+        self.setUpdatesEnabled(True)
+
+    def _save_project(self, p, new_fname=False, *args, **kwargs):
+        if new_fname or "project_file" not in p.attrs:
+            fname = QFileDialog.getSaveFileName(
+                self,
+                "Project destination",
+                os.getcwd(),
+                "Pickle files (*.pkl);;" "All files (*)",
+            )
+            if with_qt5:  # the filter is passed as well
+                fname = fname[0]
+            if not fname:
+                return
+        else:
+            fname = p.attrs["project_file"]
+        try:
+            p.save_project(fname, *args, **kwargs)
+        except Exception:
+            self.error_msg.showTraceback("<b>Could not save the project!</b>")
+        else:
+            p.attrs["project_file"] = fname
+            if p.is_main:
+                self.update_project_action(p.num)
+
+

+[docs]
+    def load_mp_preset(self):
+        self._load_preset(psy.gcp(True))

+
+
+

+[docs]
+    def load_sp_preset(self):
+        self._load_preset(psy.gcp())

+
+
+    def _load_preset(self, project, *args, **kwargs):
+        fname, ok = QFileDialog.getOpenFileName(
+            self,
+            "Load preset",
+            os.path.join(get_configdir(), "presets"),
+            "YAML files (*.yml *.yaml);;" "All files (*)",
+        )
+        if ok:
+            project.load_preset(fname, *args, **kwargs)
+
+

+[docs]
+    def open_mp(self, *args, **kwargs):
+        """Open a new main project"""
+        self._open_project(main=True)

+
+
+

+[docs]
+    def open_sp(self, *args, **kwargs):
+        """Open a subproject and add it to the current main project"""
+        self._open_project(main=False)

+
+
+    def _open_project(self, *args, **kwargs):
+        fname = QFileDialog.getOpenFileName(
+            self,
+            "Project file",
+            os.getcwd(),
+            "Pickle files (*.pkl);;" "All files (*)",
+        )
+        if with_qt5:  # the filter is passed as well
+            fname = fname[0]
+        if not fname:
+            return
+        p = psy.Project.load_project(fname, *args, **kwargs)
+        p.attrs["project_file"] = fname
+        self.update_project_action(p.num)
+
+

+[docs]
+    def save_mp(self, *args, **kwargs):
+        """Save the current main project."""
+        self._save_project(psy.gcp(True), **kwargs)

+
+
+

+[docs]
+    def save_sp(self, *args, **kwargs):
+        """Save the current sub project."""
+        self._save_project(psy.gcp(), **kwargs)

+
+
+

+[docs]
+    def save_sp_preset(self):
+        self._save_preset(psy.gcp())

+
+
+

+[docs]
+    def save_mp_preset(self):
+        self._save_preset(psy.gcp(True))

+
+
+    def _save_preset(self, project, *args, **kwargs):
+        fname, ok = QFileDialog.getSaveFileName(
+            self,
+            "Save preset",
+            os.path.join(get_configdir(), "presets"),
+            "YAML file (*.yml *.yaml);;" "All files (*)",
+        )
+        if ok:
+            project.save_preset(fname, *args, **kwargs)
+
+    def _export_project(self, p, *args, **kwargs):
+        fname = QFileDialog.getSaveFileName(
+            self,
+            "Picture destination",
+            os.getcwd(),
+            "PDF files (*.pdf);;"
+            "Postscript file (*.ps);;"
+            "PNG image (*.png);;"
+            "JPG image (*.jpg *.jpeg);;"
+            "TIFF image (*.tif *.tiff);;"
+            "GIF image (*.gif);;"
+            "All files (*)",
+        )
+        if with_qt5:  # the filter is passed as well
+            fname = fname[0]
+        if not fname:
+            return
+        try:
+            p.export(fname, *args, **kwargs)
+        except Exception:
+            self.error_msg.showTraceback(
+                "<b>Could not export the figures!</b>"
+            )
+
+

+[docs]
+    def export_mp(self, *args, **kwargs):
+        self._export_project(psy.gcp(True), **kwargs)

+
+
+

+[docs]
+    def export_sp(self, *args, **kwargs):
+        self._export_project(psy.gcp(), **kwargs)

+
+
+

+[docs]
+    def new_plots(self, exec_=None):
+        if hasattr(self, "plot_creator"):
+            try:
+                self.plot_creator.close()
+            except RuntimeError:
+                pass
+        self.plot_creator = PlotCreator(
+            help_explorer=self.help_explorer, parent=self
+        )
+        available_width = QDesktopWidget().availableGeometry().width() // 3
+        width = self.plot_creator.sizeHint().width()
+        height = self.plot_creator.sizeHint().height()
+        # The plot creator window should cover at least one third of the screen
+        self.plot_creator.resize(max(available_width, width), height)
+        if exec_:
+            self.plot_creator.exec_()

+
+
+

+[docs]
+    def excepthook(self, type, value, traceback):
+        """A method to replace the sys.excepthook"""
+        self.error_msg.excepthook(type, value, traceback)

+
+
+

+[docs]
+    def edit_preferences(self, exec_=None):
+        """Edit Spyder preferences"""
+        if hasattr(self, "preferences"):
+            try:
+                self.preferences.close()
+            except RuntimeError:
+                pass
+        self.preferences = dlg = Prefences(self)
+        for PrefPageClass in self.config_pages:
+            widget = PrefPageClass(dlg)
+            widget.initialize()
+            dlg.add_page(widget)
+        available_width = int(
+            0.667 * QDesktopWidget().availableGeometry().width()
+        )
+        width = dlg.sizeHint().width()
+        height = dlg.sizeHint().height()
+        # The preferences window should cover at least one third of the screen
+        dlg.resize(max(available_width, width), height)
+        if exec_:
+            dlg.exec_()

+
+
+

+[docs]
+    def about(self):
+        """About the tool"""
+        versions = {
+            key: d["version"] for key, d in psyplot.get_versions(False).items()
+        }
+        versions.update(psyplot_gui.get_versions()["requirements"])
+        versions.update(psyplot._get_versions()["requirements"])
+        versions["github"] = "https://github.com/psyplot/psyplot"
+        versions["author"] = psyplot.__author__
+        QMessageBox.about(
+            self,
+            "About psyplot",
+            """<b>psyplot: Interactive data visualization with python</b>
+            <br>Copyright &copy; 2017- Philipp Sommer
+            <br>Licensed under the terms of the GNU General Public License v2
+            (GPLv2)
+            <p>Created by %(author)s</p>
+            <p>Most of the icons come from the
+            <a href="https://fontawesome.com/">Fontawesom</a>.</p>
+            <p>For bug reports and feature requests, please go
+            to our <a href="%(github)s">Github website</a> or contact the
+            author via mail.</p>
+            <p>This package uses (besides others) the following packages:<br>
+            <ul>
+                <li>psyplot %(psyplot)s</li>
+                <li>Python %(python)s </li>
+                <li>numpy %(numpy)s</li>
+                <li>xarray %(xarray)s</li>
+                <li>pandas %(pandas)s</li>
+                <li>psyplot_gui %(psyplot_gui)s</li>
+                <li>Qt %(qt)s</li>
+                <li>PyQt %(pyqt)s</li>
+                <li>qtconsole %(qtconsole)s</li>
+            </ul></p>
+            <p>For a full list of requirements see the <em>dependencies</em>
+            in the <em>Help</em> menu.</p>
+            <p>This software is provided "as is", without warranty or support
+            of any kind.</p>"""
+            % versions,
+        )

+
+
+

+[docs]
+    def show_dependencies(self, exec_=None):
+        """Open a dialog that shows the dependencies"""
+        if hasattr(self, "dependencies"):
+            try:
+                self.dependencies.close()
+            except RuntimeError:
+                pass
+        self.dependencies = dlg = DependenciesDialog(
+            psyplot.get_versions(), parent=self
+        )
+        dlg.resize(630, 420)
+        if exec_:
+            dlg.exec_()

+
+
+

+[docs]
+    def reset_rcParams(self):
+        rcParams.update_from_defaultParams()
+        psy.rcParams.update_from_defaultParams()

+
+
+

+[docs]
+    def add_mp_to_menu(self):
+        mp = psy.gcp(True)
+        action = QAction(
+            os.path.basename(
+                mp.attrs.get("project_file", "Untitled %s*" % mp.num)
+            ),
+            self,
+        )
+        action.setStatusTip("Make project %s the current project" % mp.num)
+        action.triggered.connect(lambda: psy.scp(psy.project(mp.num)))
+        self.project_actions[mp.num] = action
+        self.windows_menu.addAction(action)

+
+
+

+[docs]
+    def update_project_action(self, num):
+        action = self.project_actions.get(num)
+        p = psy.project(num)
+        if action:
+            action.setText(
+                os.path.basename(
+                    p.attrs.get("project_file", "Untitled %s*" % num)
+                )
+            )

+
+
+

+[docs]
+    def eventually_add_mp_to_menu(self, p):
+        for num in set(self.project_actions).difference(
+            psy.get_project_nums()
+        ):
+            self.windows_menu.removeAction(self.project_actions.pop(num))
+        if p is None or not p.is_main:
+            return
+        if p.num not in self.project_actions:
+            self.add_mp_to_menu()

+
+
+

+[docs]
+    def start_open_files_server(self):
+        """This method listens to the open_files_port and opens the plot
+        creator for new files
+
+        This method is inspired and to most parts copied from spyder"""
+        self.open_files_server.setsockopt(
+            socket.SOL_SOCKET, socket.SO_REUSEADDR, 1
+        )
+        port = rcParams["main.open_files_port"]
+        try:
+            self.open_files_server.bind(("127.0.0.1", port))
+        except Exception:
+            return
+        self.open_files_server.listen(20)
+        while 1:  # 1 is faster than True
+            try:
+                req, dummy = self.open_files_server.accept()
+            except socket.error as e:
+                # See Issue 1275 for details on why errno EINTR is
+                # silently ignored here.
+                eintr = errno.EINTR
+                # To avoid a traceback after closing on Windows
+                if e.args[0] == eintr:
+                    continue
+                # handle a connection abort on close error
+                enotsock = (
+                    errno.WSAENOTSOCK if os.name == "nt" else errno.ENOTSOCK
+                )
+                if e.args[0] in [errno.ECONNABORTED, enotsock]:
+                    return
+                raise
+            args = pickle.loads(req.recv(1024))
+            callback = args[0]
+            func = self.callbacks[callback]
+            self.logger.debug("Emitting %s callback %s", callback, func)
+            func(args[1:])
+            req.sendall(b" ")

+
+
+

+[docs]
+    def change_cwd(self, path):
+        """Change the current working directory"""
+        import os
+
+        os.chdir(path)

+
+
+    def _change_cwd(self, args):
+        path = args[0][0]
+        self.change_cwd(path)
+
+    docstrings.keep_params(
+        "make_plot.parameters",
+        "fnames",
+        "project",
+        "engine",
+        "plot_method",
+        "name",
+        "dims",
+        "encoding",
+        "enable_post",
+        "seaborn_style",
+        "concat_dim",
+        "chname",
+        "preset",
+        "decoder",
+    )
+
+

+[docs]
+    def open_files(self, fnames):
+        """Open a file and ask the user how"""
+        fnames_s = ", ".join(map(os.path.basename, fnames))
+        if len(fnames_s) > 30:
+            fnames_s = fnames_s[:27] + "..."
+        item, ok = QInputDialog.getItem(
+            self,
+            "Open file...",
+            "Open %s as..." % fnames_s,
+            list(self.open_file_options),
+            current=0,
+            editable=False,
+        )
+        if ok:
+            return self.open_file_options[item](fnames)

+
+
+

+[docs]
+    @docstrings.get_sections(base="MainWindow.open_external_files")
+    @docstrings.dedent
+    def open_external_files(
+        self,
+        fnames=[],
+        project=None,
+        engine=None,
+        plot_method=None,
+        name=None,
+        dims=None,
+        encoding=None,
+        enable_post=False,
+        seaborn_style=None,
+        concat_dim=get_default_value(xr.open_mfdataset, "concat_dim"),
+        chname={},
+        preset=None,
+        decoder=None,
+    ):
+        """
+        Open external files
+
+        Parameters
+        ----------
+        %(make_plot.parameters.fnames|project|engine|plot_method|name|dims|encoding|enable_post|seaborn_style|concat_dim|chname|preset|decoder)s
+        """
+        if seaborn_style is not None:
+            import seaborn as sns
+
+            sns.set_style(seaborn_style)
+        if project is not None:
+            fnames = [s.split(",") for s in fnames]
+            if not isinstance(project, dict):
+                project = psyd.safe_list(project)[0]
+            single_files = (files[0] for files in fnames if len(files) == 1)
+            alternative_paths = defaultdict(lambda: next(single_files, None))
+            alternative_paths.update(
+                list(files for files in fnames if len(files) == 2)
+            )
+            p = psy.Project.load_project(
+                project,
+                alternative_paths=alternative_paths,
+                engine=engine,
+                main=not psy.gcp(),
+                encoding=encoding,
+                enable_post=enable_post,
+                chname=chname,
+            )
+            if preset:
+                p.load_preset(preset)
+            if isinstance(project, six.string_types):
+                p.attrs.setdefault("project_file", project)
+            return True
+        else:
+            self.new_plots(False)
+            self.plot_creator.open_dataset(
+                fnames, engine=engine, concat_dim=concat_dim
+            )
+            if name == "all":
+                ds = self.plot_creator.get_ds()
+                name = sorted(set(ds.variables) - set(ds.coords))
+            self.plot_creator.insert_array(
+                list(filter(None, psy.safe_list(name)))
+            )
+            if dims is not None:
+                ds = self.plot_creator.get_ds()
+                dims = {
+                    key: ", ".join(map(str, val))
+                    for key, val in six.iteritems(dims)
+                }
+                for i, vname in enumerate(
+                    self.plot_creator.array_table.vnames
+                ):
+                    self.plot_creator.array_table.selectRow(i)
+                    self.plot_creator.array_table.update_selected()
+                self.plot_creator.array_table.selectAll()
+                var = ds[vname[0]]
+                self.plot_creator.array_table.update_selected(
+                    dims=var.psy.decoder.correct_dims(var, dims.copy())
+                )
+            if preset:
+                self.plot_creator.set_preset(preset)
+            if plot_method:
+                self.plot_creator.pm_combo.setCurrentIndex(
+                    self.plot_creator.pm_combo.findText(plot_method)
+                )
+            if decoder:
+                self.plot_creator.set_decoder(decoder)
+            self.plot_creator.exec_()
+            return True

+
+
+    def _open_external_files(self, args):
+        self.open_external_files(*args)
+
+

+[docs]
+    @classmethod
+    @docstrings.get_sections(base="MainWindow.run")
+    @docstrings.dedent
+    def run(
+        cls,
+        fnames=[],
+        project=None,
+        engine=None,
+        plot_method=None,
+        name=None,
+        dims=None,
+        encoding=None,
+        enable_post=False,
+        seaborn_style=None,
+        concat_dim=get_default_value(xr.open_mfdataset, "concat_dim"),
+        chname={},
+        preset=None,
+        decoder=None,
+        show=True,
+    ):
+        """
+        Create a mainwindow and open the given files or project
+
+        This class method creates a new mainwindow instance and sets the
+        global :attr:`mainwindow` variable.
+
+        Parameters
+        ----------
+        %(MainWindow.open_external_files.parameters)s
+        %(MainWindow.parameters)s
+
+        Notes
+        -----
+        - There can be only one mainwindow at the time
+        - This method does not create a QApplication instance! See
+          :meth:`run_app`
+
+        See Also
+        --------
+        run_app
+        """
+        mainwindow = cls(show=show)
+        _set_mainwindow(mainwindow)
+        if fnames or project:
+            mainwindow.open_external_files(
+                fnames,
+                project,
+                engine,
+                plot_method,
+                name,
+                dims,
+                encoding,
+                enable_post,
+                seaborn_style,
+                concat_dim,
+                chname,
+                preset,
+                decoder,
+            )
+        psyplot.with_gui = True
+        return mainwindow

+
+
+

+[docs]
+    def register_shortcut(
+        self, action, shortcut, context=Qt.ApplicationShortcut
+    ):
+        """Register an action for a shortcut"""
+        shortcuts = psy.safe_list(shortcut)
+        for j, shortcut in enumerate(shortcuts):
+            found = False
+            for i, (s, a) in enumerate(self.current_shortcuts):
+                if s == shortcut:
+                    new_shortcuts = [
+                        sc
+                        for sc in self.current_shortcuts[i][1].shortcuts()
+                        if sc != s
+                    ]
+                    a.setShortcut(QKeySequence())
+                    if new_shortcuts:
+                        a.setShortcuts(new_shortcuts)
+                    self.current_shortcuts[i][1] = action
+                    found = True
+                    break
+            if not found:
+                self.default_shortcuts.append([shortcut, action])
+                self.current_shortcuts.append([shortcut, action])
+        action.setShortcuts(shortcuts)
+        action.setShortcutContext(context)

+
+
+

+[docs]
+    @classmethod
+    @docstrings.dedent
+    def run_app(cls, *args, **kwargs):
+        """
+        Create a QApplication, open the given files or project and enter the
+        mainloop
+
+        Parameters
+        ----------
+        %(MainWindow.run.parameters)s
+
+        See Also
+        --------
+        run
+        """
+        app = QApplication(sys.argv)
+        cls.run(*args, **kwargs)
+        sys.exit(app.exec_())

+
+
+

+[docs]
+    def closeEvent(self, event):
+        """closeEvent reimplementation"""
+        if not self._is_open or (self._is_open and self.close()):
+            self._is_open = False
+            event.accept()

+
+
+

+[docs]
+    def close(self):
+        _set_mainwindow(None)
+        if self.open_files_server is not None:
+            self.open_files_server.close()
+            del self.open_files_server
+        for widget in self.plugins.values():
+            widget.close()
+        self.plugins.clear()
+        return super(MainWindow, self).close()

+

+
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/plot_creator.html b/_modules/psyplot_gui/plot_creator.html new file mode 100644 index 0000000..6ff4783 --- /dev/null +++ b/_modules/psyplot_gui/plot_creator.html @@ -0,0 +1,3028 @@ + + + + + + psyplot_gui.plot_creator — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.plot_creator

+"""This module contains a widget to create new plots with psyplot
+
+The main class is the :class:`PlotCreator` which is used to handle the
+different plotting methods of the :class:`psyplot.project.ProjectPlotter`
+class"""
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+from __future__ import division
+
+import logging
+import os
+import re
+import types
+from collections import defaultdict
+from functools import partial
+from itertools import chain, cycle, product, repeat, starmap
+from math import floor
+
+import matplotlib as mpl
+import numpy as np
+import psyplot.project as psy
+import six
+import xarray
+from psyplot.config.rcsetup import get_configdir
+from psyplot.utils import _temp_bool_prop
+
+from psyplot_gui.common import (
+    ListValidator,
+    LoadFromConsoleButton,
+    PyErrorMessage,
+    get_icon,
+)
+from psyplot_gui.compat.qtcompat import (
+    QAbstractItemView,
+    QAction,
+    QCheckBox,
+    QComboBox,
+    QDialog,
+    QDialogButtonBox,
+    QDoubleValidator,
+    QFileDialog,
+    QGraphicsRectItem,
+    QGraphicsScene,
+    QGraphicsView,
+    QGridLayout,
+    QHBoxLayout,
+    QIcon,
+    QIntValidator,
+    QLabel,
+    QLineEdit,
+    QListView,
+    QMenu,
+    QPushButton,
+    QSplitter,
+    QStyledItemDelegate,
+    Qt,
+    QTableWidget,
+    QTableWidgetItem,
+    QTabWidget,
+    QtCore,
+    QToolButton,
+    QValidator,
+    QVBoxLayout,
+    QWidget,
+    asstring,
+    isstring,
+    with_qt5,
+)
+from psyplot_gui.preferences import RcParamsTree
+
+logger = logging.getLogger(__name__)
+
+
+

+[docs]
+class CoordComboBox(QComboBox):
+    """Combobox showing coordinate information of a dataset
+
+    This combobox loads its data from the current dataset and allows the
+    popups to be left open. It also has a :attr:`leftclick` signal that is
+    emitted when the popup is about to be closed because the user clicked on a
+    value"""
+
+    close_popups = _temp_bool_prop("close_popups", default=True)
+    use_coords = _temp_bool_prop("use_coords", default=False)
+    leftclick = QtCore.pyqtSignal(QComboBox)
+
+    def __init__(self, ds_func, dim, parent=None):
+        """
+        Parameters
+        ----------
+        ds_func: function
+            The function that, when called without arguments, returns the
+            xarray.Dataset to use
+        dim: str
+            The coordinate name for this combobox
+        parent: PyQt5.QtWidgets.QWidget
+            The parent widget"""
+        super(CoordComboBox, self).__init__(parent)
+        self.dim = dim
+        self._is_empty = True
+        self.get_ds = ds_func
+        self._changed = False
+        self._right_clicked = False
+
+        # modify the view
+        view = self.view()
+        # We allow the selection of multiple items with a left-click
+        view.setSelectionMode(QListView.ExtendedSelection)
+        # The following modifications will cause this behaviour:
+        #     Left-click:
+        #         Case 1: Any of the already existing plot arrays is selected
+        #             Add the selected values in the popup to the dimension in
+        #             the currently selected plot items
+        #         Case 2: No plot arrays are selected or none exists
+        #             Create new plot items from the selection in the popup
+        #     Right-Click:
+        #         Set the currentIndex which will be used when new plot items
+        #         are created
+        #
+        # Therefore we first enable a CustomContextMenu
+        view.setContextMenuPolicy(Qt.CustomContextMenu)
+
+        # We have to disable the default MousePressEvent in the views viewport
+        # because otherwise the Left-click behaviour would occur as well when
+        # hitting the right button
+        # Therefore:
+        # install an EventFilter such that only the customContextMenuRequested
+        # signal of the view is fired and not the pressed signal (which would
+        # hide the popup)
+        view.viewport().installEventFilter(self)
+        view.customContextMenuRequested.connect(self.right_click)
+        # Furthermore we implement, that the pop up shall not be closed if the
+        # keep open property is True. Therefore we have to track when the
+        # index changes
+        view.pressed.connect(self.handleItemPressed)
+        view.doubleClicked.connect(self.hide_anyway)
+
+

+[docs]
+    def eventFilter(self, obj, event):
+        """Reimplemented to filter right-click events on the view()"""
+        ret = (
+            event.type() == QtCore.QEvent.MouseButtonPress
+        ) and event.button() == Qt.RightButton
+        return ret

+
+
+

+[docs]
+    def handleItemPressed(self, index):
+        """Function to be called when an item is pressed to make sure that
+        we know whether anything changed before closing the popup"""
+        item = self.model().itemFromIndex(index)
+        if item.checkState() == Qt.Checked:
+            item.setCheckState(Qt.Unchecked)
+        else:
+            item.setCheckState(Qt.Checked)
+        self.setCurrentIndex(0)
+        self._changed = True

+
+
+

+[docs]
+    def right_click(self, point):
+        """Function that is called when an item is right_clicked"""
+        ind = self.view().indexAt(point).row()
+        self.setCurrentIndex(ind)
+        self._right_clicked = True
+        self._changed = True

+
+
+

+[docs]
+    def hide_anyway(self, index=None):
+        """Function to hide the popup despite of the :attr:`_changed` attribute"""
+        self._changed = True
+        self.hidePopup()

+
+
+

+[docs]
+    def hidePopup(self):
+        """Reimplemented to only close the popup when the :attr:`close_popup`
+        attribute is True or it is clicked outside the window"""
+        if not self._right_clicked:
+            self.leftclick.emit(self)
+        if not self._changed or self.close_popups:
+            super(CoordComboBox, self).hidePopup()
+        self._changed = False
+        self._right_clicked = False

+
+
+

+[docs]
+    def mousePressEvent(self, *args, **kwargs):
+        """Reimplemented to fill the box with content from the dataset"""
+        self.load_coord()
+        super(CoordComboBox, self).mousePressEvent(*args, **kwargs)

+
+
+

+[docs]
+    def mouseDoubleClickEvent(self, *args, **kwargs):
+        """Reimplemented to fill the box with content from the dataset"""
+        self.load_coord()
+        super(CoordComboBox, self).mouseDoubleClickEvent(*args, **kwargs)

+
+
+

+[docs]
+    def load_coord(self):
+        """Load the coordinate data from the dataset and fill the combobox with
+        it (if it is empty)"""
+        if self._is_empty:
+            ds = self.get_ds()
+            self.addItem("")
+            if self.use_coords:
+                self.addItems(ds[self.dim].astype(str).values)
+            else:
+                self.addItems(list(map(str, range(len(ds[self.dim])))))
+            self._is_empty = False

+

+
+
+
+

+[docs]
+class ArrayNameValidator(QValidator):
+    """Class to make sure that only those arrays names are inserted that are
+    not currently in the main project or the tree"""
+
+    def __init__(self, text, table, *args, **kwargs):
+        super(ArrayNameValidator, self).__init__(*args, **kwargs)
+        self.table = table
+        self.current_text = text
+        self.current_names = list(table.current_names)
+
+

+[docs]
+    def fixup(self, s):
+        s = asstring(s)
+        if not s:
+            return self.table.next_available_name()
+        return self.table.next_available_name(s + "_{0}")

+
+
+

+[docs]
+    def validate(self, s, pos):
+        s = asstring(s)
+        if not s:
+            return QValidator.Intermediate, s, pos
+        elif s == self.current_text:
+            pass
+        elif s in chain(psy.gcp(True).arr_names, self.current_names):
+            return QValidator.Intermediate, s, pos
+        return QValidator.Acceptable, s, pos

+

+
+
+
+

+[docs]
+class ArrayNameItemDelegate(QStyledItemDelegate):
+    """Delegate using the :class:`ArrayNameValidator` for validation"""
+
+

+[docs]
+    def createEditor(self, widget, option, index):
+        if not index.isValid():
+            return
+        editor = QLineEdit(widget)
+        item = self.parent().item(index.row(), index.column())
+        validator = ArrayNameValidator(
+            item.text() if item else "", self.parent(), editor
+        )
+        editor.setValidator(validator)
+        return editor

+

+
+
+
+

+[docs]
+class VariableItemDelegate(QStyledItemDelegate):
+    """Delegate alowing only the variables in the parents dataset.
+
+    The parent must hold a `get_ds` method that returns a dataset when called
+    """
+
+

+[docs]
+    def createEditor(self, widget, option, index):
+        if not index.isValid():
+            return
+        editor = QLineEdit(widget)
+        ds = self.parent().get_ds()
+        validator = ListValidator(
+            ds.variables.keys(), self.parent().sep, editor
+        )
+        editor.setValidator(validator)
+        return editor

+

+
+
+
+

+[docs]
+class VariablesTable(QTableWidget):
+    """Table to display the variables of a dataset"""
+
+    #: The variables in the dataset
+    variables = []
+
+    @property
+    def selected_variables(self):
+        """The currently selected variables"""
+        return [
+            self.variables[i]
+            for i in map(
+                list(map(asstring, self.variables)).index,
+                sorted(
+                    set(
+                        item.text()
+                        for item in self.selectedItems()
+                        if item.column() == 0
+                    )
+                ),
+            )
+        ]
+
+    def __init__(
+        self, get_func, columns=["long_name", "dims", "shape"], *args, **kwargs
+    ):
+        """
+        Parameters
+        ----------
+        get_func: function
+            The function that, when called without arguments, returns the
+            xarray.Dataset to use
+        columns: list of str
+            The attribute that will be used as columns for the variables"""
+        super(VariablesTable, self).__init__(*args, **kwargs)
+        self.variables = []
+        self.get_ds = get_func
+        self.set_columns(columns)
+        self.setEditTriggers(QAbstractItemView.NoEditTriggers)
+        self.verticalHeader().setVisible(False)
+
+

+[docs]
+    def set_columns(self, columns=None):
+        if columns is None:
+            columns = self.column_labels
+        else:
+            self.column_labels = columns
+        self.setColumnCount(len(columns) + 1)
+        self.setHorizontalHeaderLabels(["variable"] + columns)

+
+
+

+[docs]
+    def fill_from_ds(self, ds=None):
+        """Clear the table and insert items from the given `dataset`"""
+        self.clear()
+        self.set_columns()
+        if ds is None:
+            ds = self.get_ds()
+        if ds is None:
+            return
+        coords = list(ds.coords)
+        self.variables = vnames = [v for v in ds.variables if v not in coords]
+        self.setRowCount(len(vnames))
+        for i, vname in enumerate(vnames):
+            variable = ds.variables[vname]
+            self.setItem(i, 0, QTableWidgetItem(asstring(vname)))
+            for j, attr in enumerate(self.column_labels, 1):
+                if attr == "dims":
+                    self.setItem(
+                        i, j, QTableWidgetItem(", ".join(variable.dims))
+                    )
+                else:
+                    self.setItem(
+                        i,
+                        j,
+                        QTableWidgetItem(
+                            str(
+                                variable.attrs.get(
+                                    attr, getattr(variable, attr, "")
+                                )
+                            )
+                        ),
+                    )

+

+
+
+
+

+[docs]
+class CoordsTable(QTableWidget):
+    """A table showing the coordinates of in a dataset via instances of
+    :class:`CoordComboBox`"""
+
+    def __init__(self, get_func, *args, **kwargs):
+        """
+        Parameters
+        ----------
+        get_func: function
+            The function that, when called without arguments, returns the
+            xarray.Dataset to use
+        ``*args, **kwargs``
+            Determined by the :class:`PyQt5.QtWidgets.QTableWidget` class"""
+        super(CoordsTable, self).__init__(*args, **kwargs)
+        self.get_ds = get_func
+        self.setEditTriggers(QAbstractItemView.NoEditTriggers)
+        self.setRowCount(1)
+        self.verticalHeader().setVisible(False)
+        self.horizontalHeader().setStretchLastSection(True)
+        self.verticalHeader().setStretchLastSection(True)
+
+    @property
+    def combo_boxes(self):
+        """A list of :class:`CoordComboBox` in this table"""
+        return list(
+            filter(
+                lambda w: w is not None,
+                (self.cellWidget(0, i) for i in range(self.columnCount())),
+            )
+        )
+
+

+[docs]
+    def fill_from_ds(self, ds=None):
+        """Clear the table and create new comboboxes"""
+        for cb in self.combo_boxes:
+            cb.blockSignals(True)
+        self.clear()
+        if ds is None:
+            ds = self.get_ds()
+        if ds is None:
+            return
+        coords = list(ds.coords)
+        vnames = [v for v in ds.variables if v not in coords]
+        self.dims = dims = list(
+            set(chain(*(ds.variables[vname].dims for vname in vnames)))
+        )
+        try:
+            dims.sort()
+        except TypeError:
+            pass
+        self.setColumnCount(len(dims))
+        for i, dim in enumerate(dims):
+            header_item = QTableWidgetItem(dim)
+            self.setHorizontalHeaderItem(i, header_item)
+            self.setCellWidget(0, i, CoordComboBox(self.get_ds, dim))

+
+
+

+[docs]
+    def sizeHint(self):
+        """Reimplemented to adjust the heigth based upon the header and the
+        first row"""
+        return QtCore.QSize(
+            super(CoordsTable, self).sizeHint().width(),
+            self.horizontalHeader().height() + self.rowHeight(0),
+        )

+

+
+
+
+

+[docs]
+class DragDropTable(QTableWidget):
+    """Table that allows to exchange rows via drag and drop
+
+    This class was mainly taken from
+    http://stackoverflow.com/questions/26227885/drag-and-drop-rows-within-qtablewidget
+    """
+
+    def __init__(self, *args, **kwargs):
+        super(DragDropTable, self).__init__(*args, **kwargs)
+
+        self.setDragEnabled(True)
+        self.setAcceptDrops(True)
+        self.viewport().setAcceptDrops(True)
+        self.setDragDropOverwriteMode(False)
+        self.setDropIndicatorShown(True)
+
+        self.setSelectionMode(QAbstractItemView.ExtendedSelection)
+        self.setSelectionBehavior(QAbstractItemView.SelectRows)
+        self.setDragDropMode(QAbstractItemView.InternalMove)
+
+

+[docs]
+    def dropEvent(self, event):
+        if event.source() == self and (
+            event.dropAction() == Qt.MoveAction
+            or self.dragDropMode() == QAbstractItemView.InternalMove
+        ):
+            self.dropOn(event)
+
+        else:
+            super(DragDropTable, self).dropEvent(event)

+
+
+

+[docs]
+    def moveRows(self, row, remove=False):
+        """Move all selected rows to the given `row`"""
+        selRows = sorted({ind.row() for ind in self.selectedIndexes()})
+        top = selRows[0]
+
+        dropRow = row
+        if dropRow == -1:
+            dropRow = self.rowCount()
+        offset = dropRow - top
+
+        for i, row in enumerate(selRows):
+            r = row + offset
+            if r > self.rowCount() or r < 0:
+                r = 0
+            self.insertRow(r)
+
+        selRows = sorted({ind.row() for ind in self.selectedIndexes()})
+
+        top = selRows[0]
+        offset = dropRow - top
+        for i, row in enumerate(selRows):
+            r = row + offset
+            if r > self.rowCount() or r < 0:
+                r = 0
+
+            for j in range(self.columnCount()):
+                source = QTableWidgetItem(self.item(row, j))
+                self.setItem(r, j, source)
+
+        if remove:
+            for row in reversed(selRows):
+                self.removeRow(row)

+
+
+

+[docs]
+    def droppingOnItself(self, event, index):
+        dropAction = event.dropAction()
+
+        if self.dragDropMode() == QAbstractItemView.InternalMove:
+            dropAction = Qt.MoveAction
+
+        if (
+            event.source() == self
+            and event.possibleActions() & Qt.MoveAction
+            and dropAction == Qt.MoveAction
+        ):
+            selectedIndexes = self.selectedIndexes()
+            child = index
+            while child.isValid() and child != self.rootIndex():
+                if child in selectedIndexes:
+                    return True
+                child = child.parent()
+
+        return False

+
+
+

+[docs]
+    def dropOn(self, event):
+        if event.isAccepted():
+            return False, None, None, None
+
+        index = QtCore.QModelIndex()
+        row = -1
+
+        if self.viewport().rect().contains(event.pos()):
+            index = self.indexAt(event.pos())
+            if not index.isValid() or not self.visualRect(index).contains(
+                event.pos()
+            ):
+                index = self.rootIndex()
+
+        if self.model().supportedDropActions() & event.dropAction():
+            if index != self.rootIndex():
+                dropIndicatorPosition = self.position(
+                    event.pos(), self.visualRect(index), index
+                )
+
+                if dropIndicatorPosition == QAbstractItemView.AboveItem:
+                    row = index.row()
+                    # index = index.parent()
+                elif dropIndicatorPosition == QAbstractItemView.BelowItem:
+                    row = index.row() + 1
+                    # index = index.parent()
+                else:
+                    row = index.row()
+
+            if not self.droppingOnItself(event, index):
+                self.moveRows(row, remove=event.source() is None)
+                event.accept()

+
+
+

+[docs]
+    def position(self, pos, rect, index):
+        r = QAbstractItemView.OnViewport
+        margin = 2
+        if pos.y() - rect.top() < margin:
+            r = QAbstractItemView.AboveItem
+        elif rect.bottom() - pos.y() < margin:
+            r = QAbstractItemView.BelowItem
+        elif rect.contains(pos, True):
+            r = QAbstractItemView.OnItem
+
+        if r == QAbstractItemView.OnItem and not (
+            self.model().flags(index) & Qt.ItemIsDropEnabled
+        ):
+            if pos.y() < rect.center().y():
+                r = QAbstractItemView.AboveItem
+            else:
+                r = QAbstractItemView.BelowItem
+        return r

+

+
+
+
+

+[docs]
+class ArrayTable(DragDropTable):
+    """Table that shows the arrays that will be used for plotting
+
+    It contains the following columns:
+
+    1. The variable column which holds the variable names of the arrays.
+       multiple variables may be separated by ';;'
+    2. The array name. The :attr:`psyplot.data.InteractiveBase.arr_name`
+       attribute. Depending on the plot methods
+       :attr:`~psyplot.project._PlotterInterface._prefer_list`, multiple
+       array names are allowed or not. If this attribute is True,
+       arrays with the same array name will be concatenated into one
+       :class:`psyplot.data.InteractiveList`
+    3. The axes column. Use the right-click context menu to select a
+       subplot
+    4. The check column. Checks for variable names, array names, axes and
+       dimensions via the :meth:`psyplot.project._PlotterInterface.check_data`
+       method
+    5. Columns containing the dimension informations"""
+
+    #: Pattern to interprete subplots
+    subplot_patt = re.compile(
+        r"\((?P<fig>\d+),\s*"  # figure
+        r"(?P<rows>\d+),\s*"  # rows
+        r"(?P<cols>\d+),\s*"  # columns
+        r"(?P<num1>\d+),\s*"  # position
+        r"(?P<num2>\d+)\s*\)"  # end subplot
+    )
+
+    #: pattern to interprete arbitrary axes
+    axes_patt = re.compile(
+        r"\((?P<fig>\d+),\s*"  # figure
+        r"(?P<x0>0*\.\d+),\s*"  # lower left x
+        r"(?P<y0>0*\.\d+),\s*"  # lower left y
+        r"(?P<x1>0*\.\d+),\s*"  # upper right x
+        r"(?P<y1>0*\.\d+)\s*\)"  # upper right y
+    )
+
+    #: The separator for variable names
+    sep = ";;"
+
+    #: Tool tip for the variable column
+    VARIABLE_TT = (
+        "The variables of the array from the dataset. Multiple"
+        "variables for one array may be separated by '%s'" % (sep)
+    )
+
+    #: Base tool tip for a dimension column
+    DIMS_TT = (
+        "The values for dimension %s."
+        " You can use integers either explicit, e.g."
+        "<ul>"
+        "<li>1, 2, 3, ...,</li>"
+        "</ul>"
+        "or slices like <em>start:end:step</em>, e.g."
+        "<ul>"
+        "<li>'1:6:2'</li>"
+        "</ul>"
+        "where the latter is equivalent to '1, 3, 5'"
+    )
+
+

+[docs]
+    def dropEvent(self, event):
+        """Reimplemented to call the :meth:`check_arrays` after the call"""
+        # apparently the row deletion occurs after the call of this method.
+        # therefore our call of `check_arrays` leads to the (wrong) result
+        # of a duplicated entry. We therefore filter them out here and make
+        # sure that those arrays are not considered when checking for
+        # duplicates
+        messages = dict(
+            zip(self.current_names, [msg for b, msg in self.check_arrays()])
+        )
+        super(ArrayTable, self).dropEvent(event)
+        ignores = [
+            arr_name
+            for arr_name, msg in messages.items()
+            if not msg.startswith("Found duplicated entry of")
+        ]
+        self.check_arrays(ignore_duplicates=ignores)

+
+
+    @property
+    def prefer_list(self):
+        """Return the _prefer_list attribute of the plot_method"""
+        return self.plot_method and self.plot_method._prefer_list
+
+    @property
+    def current_names(self):
+        """The names that are currently in use"""
+        if self.prefer_list:
+            return []
+        arr_col = self.arr_col
+        return [
+            asstring(item.text())
+            for item in filter(
+                None,
+                map(lambda i: self.item(i, arr_col), range(self.rowCount())),
+            )
+        ]
+
+    @property
+    def vnames(self):
+        """The list of variable names per array"""
+        var_col = self.var_col
+        return [
+            self.item(i, var_col).text().split(";;")
+            for i in range(self.rowCount())
+        ]
+
+    @property
+    def arr_names_dict(self):
+        """The final dictionary containing the array names necessary for the
+        `arr_names` parameter in the
+        :meth:`psyplot.data.ArrayList.from_dataset` method"""
+        ret = dict()
+        arr_col = self.arr_col
+        for irow in range(self.rowCount()):
+            arr_name = asstring(self.item(irow, arr_col).text())
+            if self.plot_method and self.plot_method._prefer_list:
+                d = ret.setdefault(arr_name, defaultdict(list))
+                d["name"].append(self._get_variables(irow))
+                for key, val in self._get_dims(irow).items():
+                    d[key].append(val)
+            else:
+                ret[arr_name] = d = {"name": self._get_variables(irow)}
+                d.update(self._get_dims(irow))
+
+        return ret
+
+    @property
+    def axes(self):
+        """A list of axes settings corresponding to the arrays in the
+        :attr:`arr_names_dict`"""
+        ret = []
+        d = set()
+        arr_col = self.arr_col
+        axes_col = self.axes_col
+        # get the projection
+        pm = self.plot_method
+        kwargs = {}
+        if pm is not None:
+            projection = self.plot_method.plotter_cls._get_sample_projection()
+            if projection is not None:
+                kwargs["projection"] = projection
+        for irow in range(self.rowCount()):
+            arr_name = self.item(irow, arr_col).text()
+            if arr_name in d:
+                continue
+            d.add(arr_name)
+            axes_type, args = self.axes_info(self.item(irow, axes_col))
+            if axes_type == "subplot":
+                ret.append(SubplotCreator.create_subplot(*args, **kwargs))
+            elif axes_type == "axes":
+                ret.append(AxesCreator.create_axes(*args, **kwargs))
+            else:
+                ret.append(None)
+        return ret
+
+    @property
+    def var_col(self):
+        """The index of the variable column"""
+        return self.desc_cols.index(self.VARIABLE_LABEL)
+
+    @property
+    def arr_col(self):
+        """The index of the array name column"""
+        return self.desc_cols.index(self.ARRAY_LABEL)
+
+    @property
+    def axes_col(self):
+        """The index of the axes column"""
+        return self.desc_cols.index(self.AXES_LABEL)
+
+    @property
+    def check_col(self):
+        """The index of the check column"""
+        return self.desc_cols.index(self.CHECK_LABEL)
+
+    def __init__(self, get_func, columns=[], *args, **kwargs):
+        """
+        Parameters
+        ----------
+        get_func: function
+            The function that, when called without arguments, returns the
+            xarray.Dataset to use
+        columns: list of str
+            The coordinates in the dataset"""
+        super(ArrayTable, self).__init__(*args, **kwargs)
+        self.get_ds = get_func
+        self.VARIABLE_LABEL = "variable"
+        self.ARRAY_LABEL = "array name"
+        self.AXES_LABEL = "axes"
+        self.CHECK_LABEL = "check"
+        self.desc_cols = [
+            self.VARIABLE_LABEL,
+            self.ARRAY_LABEL,
+            self.AXES_LABEL,
+            self.CHECK_LABEL,
+        ]
+        self.plot_method = None
+        self.setSelectionBehavior(QAbstractItemView.SelectRows)
+        self.setContextMenuPolicy(Qt.CustomContextMenu)
+        self.customContextMenuRequested.connect(self.showAxesCreator)
+        self.set_columns(columns)
+        self.setItemDelegateForColumn(self.var_col, VariableItemDelegate(self))
+        self.setItemDelegateForColumn(
+            self.arr_col, ArrayNameItemDelegate(self)
+        )
+        self.itemChanged.connect(self.check_item)
+        self.itemChanged.connect(self.update_other_items)
+
+

+[docs]
+    def set_columns(self, columns):
+        """Set the columns of the table
+
+        Parameters
+        ----------
+        columns: list of str
+            The coordinates in the dataset"""
+        if columns is None:
+            columns = self.column_labels
+        else:
+            self.column_labels = columns
+        self.setColumnCount(len(columns) + len(self.desc_cols))
+        self.setHorizontalHeaderLabels(self.desc_cols + columns)
+        for i, col in enumerate(columns, len(self.desc_cols)):
+            self.horizontalHeaderItem(i).setToolTip(self.DIMS_TT % col)
+        self.horizontalHeaderItem(self.var_col).setToolTip(self.VARIABLE_TT)

+
+
+

+[docs]
+    def setup_from_ds(self, ds=None, plot_method=None):
+        """Fill the table based upon the given dataset.
+
+        Parameters
+        ----------
+        ds: xarray.Dataset or None
+            If None, the dataset from the :attr:`get_ds` function is used
+        plot_method: psyplot.project._PlotterInterface or None
+            The plot method of the :class:`psyplot.project.ProjectPlotter`
+            class or None if no plot shall be made"""
+        self.clear()
+        self.setRowCount(0)
+        if ds is None:
+            ds = self.get_ds()
+        if plot_method is not None:
+            self.set_pm(plot_method)
+        if ds is None:
+            self.set_columns([])
+            return
+        coords = list(ds.coords)
+        vnames = [v for v in ds.variables if v not in coords]
+        self.dims = dims = list(
+            set(chain(*(ds.variables[vname].dims for vname in vnames)))
+        )
+        try:
+            dims.sort()
+        except TypeError:
+            pass
+        self.set_columns(dims)

+
+
+

+[docs]
+    def next_available_name(self, *args, **kwargs):
+        """Gives the next possible name to use"""
+        counter = iter(range(1000))
+        current_names = self.current_names
+        mp = psy.gcp(True)
+        while True:
+            name = mp.next_available_name(*args, counter=counter, **kwargs)
+            if name not in current_names:
+                return name

+
+
+

+[docs]
+    def insert_array(self, name, check=True, **kwargs):
+        """Appends the settings for an array the the list in a new row"""
+        dims = set(self.get_ds().variables[name].dims)
+        irow = self.rowCount()
+        self.setRowCount(irow + 1)
+        self.setItem(irow, 0, QTableWidgetItem(asstring(name)))
+        self.setItem(irow, 1, QTableWidgetItem(self.next_available_name()))
+        self.setItem(irow, 2, QTableWidgetItem(""))
+        for dim in dims.intersection(kwargs):
+            icol = len(self.desc_cols) + self.dims.index(dim)
+            self.setItem(irow, icol, QTableWidgetItem(kwargs[dim]))
+        if check:
+            self.check_array(irow)

+
+
+

+[docs]
+    def remove_arrays(self, selected=True):
+        """Remove array rows from the list
+
+        Parameters
+        ----------
+        selected: bool
+            If True, only the selected rows are removed"""
+        if selected:
+            irows = sorted({ind.row() for ind in self.selectedIndexes()})
+        else:
+            irows = list(range(self.rowCount()))
+        for irow in irows[::-1]:
+            self.removeRow(irow)

+
+
+

+[docs]
+    def update_selected(self, check=True, dims={}):
+        """Updates the dimensions of the selectiond arrays with the given
+        `dims`
+
+        Parameters
+        ----------
+        check: bool
+            whether the array shall be checked afterwards
+        dims: dict
+            a mapping from coordinate names to string values that shall be
+            appended to the current text"""
+        ds = self.get_ds()
+        irows = {item.row() for item in self.selectedItems()}
+        var_col = self.desc_cols.index(self.VARIABLE_LABEL)
+        for irow in irows:
+            vname = (
+                asstring(self.item(irow, var_col).text())
+                .split(self.sep)[0]
+                .strip()
+            )
+            var_dims = set(ds.variables[vname].dims)
+            for dim in var_dims.intersection(dims):
+                icol = len(self.desc_cols) + self.dims.index(dim)
+                item = self.item(irow, icol)
+                curr_text = asstring(item.text())
+                if curr_text:
+                    curr_text += ", "
+                item.setText(curr_text + dims[dim])
+        if check:
+            for irow in irows:
+                self.check_array(irow)

+
+
+

+[docs]
+    def add_subplots(self, rows, cols, maxn=None):
+        """Add multiple subplots to the selected arrays"""
+        import matplotlib.pyplot as plt
+
+        irows = sorted({ind.row() for ind in self.selectedIndexes()})
+        irows = irows or list(range(self.rowCount()))
+        maxn = maxn or rows * cols
+        figs = chain(
+            *([i] * maxn for i in range(1, 1000) if i not in plt.get_fignums())
+        )
+        nums = cycle(range(1, maxn + 1))
+        seen = set()
+        axes_col = self.desc_cols.index(self.AXES_LABEL)
+        arr_col = self.desc_cols.index(self.ARRAY_LABEL)
+        for irow in irows:
+            arr_item = self.item(irow, arr_col)
+            if arr_item is None or arr_item.text() in seen:
+                continue
+            seen.add(arr_item.text())
+            num = next(nums)
+            text = "(%i, %i, %i, %i, %i)" % (next(figs), rows, cols, num, num)
+            item = QTableWidgetItem(text)
+            self.setItem(irow, axes_col, item)

+
+
+

+[docs]
+    def add_single_subplot(self, rows, cols, row, col):
+        """Add one subplot to the selected arrays on multiple figures"""
+        import matplotlib.pyplot as plt
+
+        irows = sorted({ind.row() for ind in self.selectedIndexes()})
+        irows = irows or list(range(self.rowCount()))
+        figs = (num for num in range(1, 1000) if num not in plt.get_fignums())
+        num = (row - 1) * rows + col
+        seen = set()
+        axes_col = self.desc_cols.index(self.AXES_LABEL)
+        arr_col = self.desc_cols.index(self.ARRAY_LABEL)
+        for irow in irows:
+            arr_item = self.item(irow, arr_col)
+            if arr_item is None or arr_item.text() in seen:
+                continue
+            seen.add(arr_item.text())
+            text = "(%i, %i, %i, %i, %i)" % (next(figs), rows, cols, num, num)
+            item = QTableWidgetItem(text)
+            self.setItem(irow, axes_col, item)

+
+
+

+[docs]
+    def showAxesCreator(self, pos):
+        """Context menu for right-click on a row"""
+        irows = sorted({ind.row() for ind in self.selectedIndexes()})
+        if not irows:
+            return
+        menu = QMenu(self)
+        menu.addAction(self.axes_creator_action(irows))
+        menu.exec_(self.mapToGlobal(pos))

+
+
+

+[docs]
+    def axes_creator_action(self, rows):
+        """Action to open a :class:`AxesCreatorCollection` for the selected
+        rows"""
+        axes_col = self.desc_cols.index(self.AXES_LABEL)
+        items = [self.item(row, axes_col) for row in rows]
+        action = QAction("Select subplot", self)
+        types_and_args = list(
+            filter(lambda t: t[0], map(self.axes_info, items))
+        )
+        types = [t[0] for t in types_and_args]
+        if types and all(t == types[0] for t in types):
+            if types[0] == "subplot":
+                creator_kws = ["fig", "rows", "cols", "num1", "num2"]
+            elif types[0] == "axes":
+                creator_kws = ["fig", "x0", "y0", "x1", "y1"]
+            else:
+                creator_kws = []
+            func_name = types[0]
+            args = [t[1] for t in types_and_args]
+
+            #: the initialization keywords of the :class:`SubplotCreator` class
+            kwargs = {}
+
+            if len(items) > 0:
+                kwargs["fig"] = ""
+
+            for kw, vals in zip(creator_kws, zip(*args)):
+                if all(val == vals[0] for val in vals):
+                    kwargs[kw] = vals[0]
+        else:
+            func_name = None
+            kwargs = {}
+
+        action.triggered.connect(
+            self._open_axes_creator(items, func_name, kwargs)
+        )
+        return action

+
+
+    def _change_axes(self, items, iterator):
+        seen = set()
+        arr_col = self.desc_cols.index(self.ARRAY_LABEL)
+        for item, text in zip(items, iterator):
+            arr_name = self.item(item.row(), arr_col).text()
+            if arr_name in seen:
+                continue
+            seen.add(arr_name)
+            item.setText(text)
+
+    def _open_axes_creator(self, items, func_name, kwargs):
+        def func():
+            if hasattr(self, "_axes_creator"):
+                self._axes_creator.close()
+            self._axes_creator = obj = AxesCreatorCollection(
+                func_name, kwargs, parent=self
+            )
+            obj.okpressed.connect(partial(self._change_axes, items))
+            obj.exec_()
+
+        return func
+
+

+[docs]
+    def axes_info(self, s):
+        """Interpretes an axes information"""
+        s = asstring(s) if isstring(s) else asstring(s.text())
+        m = self.subplot_patt.match(s)
+        if m:
+            return "subplot", list(map(int, m.groups()))
+        m = self.axes_patt.match(s)
+        if m:
+            return "axes", [int(m.groupdict()["fig"])] + list(
+                map(float, m.groups()[1:])
+            )
+        return None, None

+
+
+

+[docs]
+    def set_pm(self, s):
+        """Set the plot method"""
+        s = asstring(s)
+        self.plot_method = getattr(psy.plot, s, None)
+        self.check_arrays()

+
+
+

+[docs]
+    def check_item(self, item):
+        """Check the array corresponding to the given item"""
+        if item.column() == self.desc_cols.index(self.CHECK_LABEL):
+            return
+        for irow in range(self.rowCount()):
+            other_item = self.item(
+                irow, self.desc_cols.index(self.ARRAY_LABEL)
+            )
+            if other_item is not None:
+                self.check_array(irow)

+
+
+

+[docs]
+    def update_other_items(self, item):
+        """Updates the axes information of the other items corresponding
+        that have the same array name as the array corresponding to the given
+        `item`"""
+        axes_col = self.desc_cols.index(self.AXES_LABEL)
+        if not self.prefer_list or item.column() != axes_col:
+            return
+        this_row = item.row()
+        arr_col = self.desc_cols.index(self.ARRAY_LABEL)
+        arr_item = self.item(this_row, arr_col)
+        if arr_item is None:
+            return
+        arr_name = arr_item.text()
+        self.blockSignals(True)
+        for row in range(self.rowCount()):
+            if row != this_row:
+                arr_item2 = self.item(row, arr_col)
+                if arr_item2 is not None and arr_item2.text() == arr_name:
+                    self.item(row, axes_col).setText(item.text())
+        self.blockSignals(False)

+
+
+

+[docs]
+    def get_all_rows(self, row):
+        """Return all the rows that have the same array name as the given `row`"""
+
+        def check_item(row):
+            item = self.item(row, arr_col)
+            return item is not None and item.text() == arr_name
+
+        if self.plot_method is None or not self.plot_method._prefer_list:
+            return [row]
+        arr_col = self.desc_cols.index(self.ARRAY_LABEL)
+        arr_name = self.item(row, arr_col).text()
+        return [r for r in range(self.rowCount()) if check_item(r)]

+
+
+

+[docs]
+    def check_array(self, row, ignore_duplicates=[]):
+        """check whether the array variables are valid, the array name is
+        valid, the axes info is valid and the dimensions"""
+
+        def set_check(row, valid, msg):
+            check_item = QTableWidgetItem()
+            check_item.setFlags(check_item.flags() ^ Qt.ItemIsEditable)
+            if valid:
+                check_item.setIcon(QIcon(get_icon("valid.png")))
+            elif valid is None:
+                check_item.setIcon(QIcon(get_icon("warning.png")))
+                check_item.setToolTip(msg)
+            else:
+                check_item.setIcon(QIcon(get_icon("invalid.png")))
+                check_item.setToolTip(msg)
+            self.setItem(row, check_col, check_item)
+            self.resizeColumnToContents(check_col)
+
+        check_col = self.desc_cols.index(self.CHECK_LABEL)
+        valid = True
+        msg = ""
+
+        # ---------------------------------------------------------------------
+        # ----------------- check if a variable is provided -------------------
+        # ---------------------------------------------------------------------
+
+        var_item = self.item(row, self.desc_cols.index(self.VARIABLE_LABEL))
+        if var_item is not None and not asstring(var_item.text()).strip():
+            valid = False
+            msg = "At least one variable name must be provided!"
+
+        # ---------------------------------------------------------------------
+        # ----------------- check for duplicates of array names ---------------
+        # ---------------------------------------------------------------------
+
+        arr_col = self.desc_cols.index(self.ARRAY_LABEL)
+        arr_item = self.item(row, arr_col)
+        if valid and arr_item is not None:
+            arr_name = arr_item.text()
+            if arr_name not in ignore_duplicates:
+                if not arr_name:
+                    msg = "An array name must be provided"
+                    valid = False
+                elif (
+                    len(
+                        [
+                            name
+                            for name in self.current_names
+                            if name == arr_name
+                        ]
+                    )
+                    > 1
+                ):
+                    valid = False
+                    msg = "Found duplicated entry of '%s'" % arr_name
+
+        # ---------------------------------------------------------------------
+        # ------- check the plotmethod if necessary and set the icon ----------
+        # ---------------------------------------------------------------------
+
+        if valid and self.plot_method is not None:
+            rows = self.get_all_rows(row)
+            checks, messages = self.plot_method.check_data(
+                self.get_ds(),
+                name=list(map(self._get_variables, rows)),
+                dims=list(map(self._get_dims, rows)),
+            )
+            for row2, valid, msg in zip(rows, checks, messages):
+                set_check(row2, valid, msg)
+            valid = checks[rows.index(row)]
+            msg = messages[rows.index(row)]
+        else:
+            set_check(row, valid, msg)
+
+        return valid, msg

+
+
+

+[docs]
+    def check_arrays(self, **kwargs):
+        """Convenience function to check all arrays using the
+        :meth:`check_array` method"""
+        return list(
+            map(partial(self.check_array, **kwargs), range(self.rowCount()))
+        )

+
+
+    def _str2slice(self, s):
+        s = s.strip()
+        if not s:
+            return []
+        s = s.split(":")
+        if len(s) > 1:
+            return range(*map(int, s[:3]))
+        return [int(s[0])]
+
+    def _get_dims(self, row):
+        start = len(self.desc_cols)
+        ret = {}
+        for dim, item in zip(
+            self.dims,
+            map(
+                lambda col: self.item(row, col),
+                range(start, self.columnCount()),
+            ),
+        ):
+            if item:
+                text = asstring(item.text())
+                if text:
+                    slices = list(
+                        chain(*map(self._str2slice, text.split(",")))
+                    )
+                    if len(slices) == 1:
+                        slices = slices[0]
+                    ret[dim] = slices
+        return ret
+
+    def _get_variables(self, row):
+        var_col = self.desc_cols.index(self.VARIABLE_LABEL)
+        ret = [
+            s.strip()
+            for s in asstring(self.item(row, var_col).text()).split(self.sep)
+        ]
+        ds = self.get_ds()
+        for i, name in enumerate(ret):
+            ret[i] = next(v for v in ds if asstring(v) == name)
+        if len(ret) == 1:
+            return ret[0]
+        return ret

+
+
+
+

+[docs]
+class SubplotCreator(QWidget):
+    """Select a subplot to which will be created (if not already existing) when
+    making the plot"""
+
+    def __init__(
+        self, fig=None, rows=1, cols=1, num1=1, num2=None, *args, **kwargs
+    ):
+        """
+        Parameters
+        ----------
+        fig: int or None
+            The number of the figure
+        rows: int
+            The number of rows for the gridspec
+        cols: int
+            The number of columns for the gridspec
+        num1: int
+            The number of the upper left corner starting from 1
+        num2: int or None
+            The number of the lower right corner starting from 1. If None,
+            `num1` is used"""
+        super(SubplotCreator, self).__init__(*args, **kwargs)
+
+        self.fig_label = QLabel("Figure number:", self)
+        if fig is None:
+            import matplotlib.pyplot as plt
+
+            fig = next(
+                num for num in range(1, 1000) if num not in plt.get_fignums()
+            )
+        self.fig_edit = QLineEdit(str(fig), self)
+        self.fig_edit.setValidator(QIntValidator())
+
+        self.rows_label = QLabel("No. of rows:", self)
+        self.rows_edit = QLineEdit(str(rows), self)
+        self.rows_edit.setValidator(QIntValidator(1, 9999, parent=self))
+
+        self.cols_label = QLabel("No. of columns:", self)
+        self.cols_edit = QLineEdit(str(cols), self)
+        self.cols_edit.setValidator(QIntValidator(1, 9999, parent=self))
+
+        self.num1_label = QLabel("Subplot number:", self)
+        self.num1_edit = QLineEdit(str(num1), self)
+        self.num1_edit.setValidator(
+            QIntValidator(1, max(1, (rows or 1) * (cols or 1)), self.num1_edit)
+        )
+
+        self.num2_label = QLabel("End of the plot", self)
+        self.num2_edit = QLineEdit(str(num2 or num1))
+        self.num2_edit.setValidator(
+            QIntValidator(
+                num1, max(1, (rows or 1) * (cols or 1)), self.num2_edit
+            )
+        )
+
+        self.table = table = QTableWidget(self)
+        table.setSelectionMode(QAbstractItemView.ContiguousSelection)
+        table.resizeRowsToContents()
+        table.resizeColumnsToContents()
+        table.setEditTriggers(QAbstractItemView.NoEditTriggers)
+        self.setup_table()
+        self.cols_edit.textChanged.connect(lambda s: self.setup_table())
+        self.rows_edit.textChanged.connect(lambda s: self.setup_table())
+        self.num1_edit.textChanged.connect(self.set_selected_from_num1)
+        self.num1_edit.textChanged.connect(self.set_num2_validator)
+        self.num2_edit.textChanged.connect(self.set_selected_from_num2)
+        table.itemSelectionChanged.connect(self.update_num_edit)
+
+        layout = QGridLayout()
+        layout.addWidget(self.fig_label, 0, 0)
+        layout.addWidget(self.fig_edit, 0, 1)
+        layout.addWidget(self.rows_label, 1, 0)
+        layout.addWidget(self.rows_edit, 1, 1)
+        layout.addWidget(self.cols_label, 2, 0)
+        layout.addWidget(self.cols_edit, 2, 1)
+        layout.addWidget(self.num1_label, 3, 0)
+        layout.addWidget(self.num1_edit, 3, 1)
+        layout.addWidget(self.num2_label, 4, 0)
+        layout.addWidget(self.num2_edit, 4, 1)
+
+        layout.addWidget(self.table, 1, 2, 4, 4)
+
+        self.setLayout(layout)
+
+

+[docs]
+    @staticmethod
+    def create_subplot(fig=None, rows=1, cols=1, num1=1, num2=None, **kwargs):
+        """Create a subplot for the given figure
+
+        Parameters
+        ----------
+        fig: :class:`matplotlib.figure.Figure` or int
+            If integer, the :func:`matplotlib.pyplot.figure` function is used
+        rows: int
+            Number of rows for the gridspec
+        cols: int
+            Number of columns for the gridspec
+        num1: int
+            The subplot number of the upper left corner in the grid (starting
+            from 1!)
+        num2: None or int
+            The subplot number of the lower left corner in the grid (starting
+            from 1!). If None, `num1` will be used
+        ``**kwargs``
+            Any other keyword argument for the
+            :meth:`matplotlib.figure.Figure.add_subplot` method
+
+        Returns
+        -------
+        mpl.axes.Subplot
+            The new created subplot"""
+        if not isinstance(fig, mpl.figure.Figure):
+            import matplotlib.pyplot as plt
+
+            fig = plt.figure(
+                fig
+                or next(
+                    num
+                    for num in range(1, 1000)
+                    if num not in plt.get_fignums()
+                )
+            )
+        if num1 == num2:
+            num2 = None
+        elif num2 is not None:
+            num2 = num2 - 1
+        num1 = num1 - 1
+        # first check if an axes with this specification already exists and if
+        # yes, return it
+        for ax in fig.axes:
+            ss = ax.get_subplotspec()
+            if ss.num1 == num1 and (
+                ss.num2 == num2
+                or (ss.num2 is None and num1 == num2)
+                or (num2 is None and ss.num2 == num1)
+            ):
+                gs = ss.get_gridspec()
+                if gs.get_geometry() == (rows, cols):
+                    return ax
+        # if it does not exist, create a new one
+        gs = mpl.gridspec.GridSpec(rows, cols)
+        ss = mpl.gridspec.SubplotSpec(gs, num1, num2)
+        return fig.add_subplot(ss, **kwargs)

+
+
+

+[docs]
+    def setup_table(self):
+        """Set up the table based upon the number of rows and columns in the
+        rows and cols line edit"""
+        rows = int(self.rows_edit.text() or 0)
+        cols = int(self.cols_edit.text() or 0)
+        if not rows or not cols:
+            return
+        self.table.clear()
+        self.table.setRowCount(rows)
+        self.table.setColumnCount(cols)
+        selected = int(self.num1_edit.text() or 0)
+        if selected:
+            selected = (
+                int(floor(selected / (cols + 1))),
+                ((selected % cols) - 1) % cols,
+            )
+        else:
+            selected = (0, 0)
+        for i, (row, col) in enumerate(product(range(rows), range(cols)), 1):
+            item = QTableWidgetItem(str(i))
+            self.table.setItem(row, col, item)
+        self.table.resizeColumnsToContents()
+        self.table.resizeRowsToContents()
+        self.num1_edit.validator().setTop(max(1, rows * cols))
+        self.set_num2_validator(self.num1_edit.text())
+        self.set_selected_from_num1(self.num1_edit.text())

+
+
+

+[docs]
+    def set_num2_validator(self, s):
+        """Set the validator range for the num2 line edit"""
+        num1 = int(s or 1)
+        rows = int(self.rows_edit.text() or 0)
+        cols = int(self.cols_edit.text() or 0)
+        num2 = int(self.num2_edit.text() or num1)
+        self.num2_edit.setText(str(max(num1, num2)))
+        self.num2_edit.validator().setRange(
+            num1, max(1, (rows or 1) * (cols or 1))
+        )

+
+
+

+[docs]
+    def set_selected_from_num1(self, s):
+        """Update the selection of the table after changes of
+        :attr:`num1_edit`"""
+        self.table.clearSelection()
+        if not s:
+            return
+        num1 = int(s)
+        num2 = int(self.num2_edit.text() or num1)
+        self.set_selected(num1, num2)

+
+
+

+[docs]
+    def set_selected_from_num2(self, s):
+        """Update the selection of the table after changes of :attr:`num2_edit`"""
+        self.table.clearSelection()
+        if not s:
+            return
+        num2 = int(s)
+        num1 = int(self.num1_edit.text() or 0)
+        if not num1:
+            return
+        self.set_selected(num1, num2)

+
+
+

+[docs]
+    def set_selected(self, num1, num2):
+        """Update the selection in the table based upon `num1` and `num2`"""
+        self.table.clearSelection()
+        rows = int(self.rows_edit.text() or 0)
+        cols = int(self.cols_edit.text() or 0)
+        if not rows or not cols:
+            return
+        sel_rows = range(
+            int(floor(num1 / (cols + 1))), int(floor(num2 / (cols + 1))) + 1
+        )
+        sel_cols = range(
+            ((num1 % cols) - 1) % cols, (((num2 % cols) - 1) % cols) + 1
+        )
+        for item in starmap(self.table.item, product(sel_rows, sel_cols)):
+            if item:
+                self.table.blockSignals(True)
+                item.setSelected(True)
+                self.table.blockSignals(False)

+
+
+

+[docs]
+    def update_num_edit(self):
+        """Update the :attr:`num1_edit` and :attr:`num2_edit` after the
+        selection of the table changed"""
+        items = self.table.selectedItems()
+        if not items:
+            return
+        sel_rows = [item.row() for item in items]
+        sel_cols = [item.column() for item in items]
+        cols = int(self.cols_edit.text() or 0)
+        self.num1_edit.blockSignals(True)
+        self.num1_edit.setText(str(min(sel_rows) * cols + min(sel_cols) + 1))
+        self.num1_edit.blockSignals(False)
+        self.num2_edit.blockSignals(True)
+        self.num2_edit.setText(str(max(sel_rows) * cols + max(sel_cols) + 1))
+        self.num2_edit.blockSignals(False)

+
+
+

+[docs]
+    def get_iter(self):
+        """Get the iterator over the axes"""
+        fig_text = self.fig_edit.text()
+        if fig_text:
+            figs = repeat(fig_text)
+        else:
+            import matplotlib.pyplot as plt
+
+            figs = map(
+                str,
+                (
+                    num
+                    for num in range(1, 1000)
+                    if num not in plt.get_fignums()
+                ),
+            )
+        num1 = self.num1_edit.text() or "1"
+        num2 = self.num2_edit.text() or num1
+        return (
+            "(%s, %s, %s, %s, %s)"
+            % (
+                fig,
+                self.rows_edit.text() or "1",
+                self.cols_edit.text() or "1",
+                num1,
+                num2,
+            )
+            for fig in figs
+        )

+

+
+
+
+

+[docs]
+class AxesViewer(QGraphicsView):
+    """Widget to show a rectangle"""
+
+    sizeChanged = QtCore.pyqtSignal(QtCore.QSize)
+
+    def __init__(self, *args, **kwargs):
+        super(AxesViewer, self).__init__(*args, **kwargs)
+        self.setHorizontalScrollBarPolicy(Qt.ScrollBarAlwaysOff)
+        self.setVerticalScrollBarPolicy(Qt.ScrollBarAlwaysOff)
+
+

+[docs]
+    def resizeEvent(self, *args, **kwargs):
+        super(AxesViewer, self).resizeEvent(*args, **kwargs)
+        self.setSceneRect(
+            0, 0, self.frameSize().width(), self.frameSize().height()
+        )
+        self.sizeChanged.emit(self.size())

+

+
+
+
+

+[docs]
+class AxesCreator(QWidget):
+    """Widget to setup an axes in a arbitrary location"""
+
+    def __init__(
+        self, fig=None, x0=0.125, y0=0.1, x1=0.9, y1=0.9, *args, **kwargs
+    ):
+        """
+        Parameters
+        ----------
+        fig: int or None
+            The figure number. If None, a new figure number will be used
+        x0: float
+            the x-coordinate of the lower left corner (between 0 and 1)
+        y0: float
+            the y-coordinate of the lower left corner (between 0 and 1)
+        x1: float
+            the x-coordinate of the upper right corner (between 0 and 1)
+        y1: float
+            the y-coordinate of the upper right corner (between 0 and 1)
+        """
+        super(AxesCreator, self).__init__(*args, **kwargs)
+        self.fig_label = QLabel("Figure number:", self)
+        if fig is None:
+            import matplotlib.pyplot as plt
+
+            fig = next(
+                num for num in range(1, 1000) if num not in plt.get_fignums()
+            )
+        self.fig_edit = QLineEdit(str(fig), self)
+        self.fig_edit.setValidator(QIntValidator())
+
+        self.x0_label = QLabel("Lower left x: ", self)
+        self.x0_edit = QLineEdit(str(x0), self)
+        self.x0_edit.setValidator(QDoubleValidator(0.0, 1.0, 5, parent=self))
+
+        self.y0_label = QLabel("Lower left y: ", self)
+        self.y0_edit = QLineEdit(str(y0), self)
+        self.y0_edit.setValidator(QDoubleValidator(0.0, 1.0, 5, parent=self))
+
+        self.x1_label = QLabel("Upper right x: ", self)
+        self.x1_edit = QLineEdit(str(x1), self)
+        self.x1_edit.setValidator(QDoubleValidator(0.0, 1.0, 5, parent=self))
+
+        self.y1_label = QLabel("Upper right y: ", self)
+        self.y1_edit = QLineEdit(str(y1), self)
+        self.y1_edit.setValidator(QDoubleValidator(0.5, 1.0, 5, parent=self))
+
+        self.graphics_scene = QGraphicsScene(self)
+        self.graphics_view = AxesViewer(self.graphics_scene)
+
+        size = self.graphics_view.size()
+        width = size.width() * float(x1 - x0)
+        height = size.height() * float(y1 - y0)
+        x0_resized = size.width() * float(x0)
+        y0_resized = size.height() * float(y0)
+
+        self.box_widget = QGraphicsRectItem(
+            x0_resized, y0_resized, width, height
+        )
+        self.graphics_scene.addItem(self.box_widget)
+        self.graphics_view.sizeChanged.connect(self.resize_rectangle)
+
+        layout = QGridLayout()
+        layout.addWidget(self.fig_label, 0, 0)
+        layout.addWidget(self.fig_edit, 0, 1)
+        layout.addWidget(self.x0_label, 1, 0)
+        layout.addWidget(self.x0_edit, 1, 1)
+        layout.addWidget(self.y0_label, 2, 0)
+        layout.addWidget(self.y0_edit, 2, 1)
+        layout.addWidget(self.x1_label, 3, 0)
+        layout.addWidget(self.x1_edit, 3, 1)
+        layout.addWidget(self.y1_label, 4, 0)
+        layout.addWidget(self.y1_edit, 4, 1)
+
+        layout.addWidget(self.graphics_view, 1, 2, 4, 4)
+
+        for w in [self.x0_edit, self.y0_edit, self.x1_edit, self.y1_edit]:
+            w.textChanged.connect(
+                lambda s: self.resize_rectangle(self.graphics_view.size())
+            )
+
+        self.setLayout(layout)
+
+

+[docs]
+    def resize_rectangle(self, size):
+        """resize the rectangle after changes of the widget size"""
+        coords = [
+            self.x0_edit.text(),
+            self.y0_edit.text(),
+            self.x1_edit.text(),
+            self.y1_edit.text(),
+        ]
+        if any(not c for c in coords):
+            return
+        x0, y0, x1, y1 = map(float, coords)
+        width = size.width() * float(x1 - x0)
+        height = size.height() * float(y1 - y0)
+        x0_resized = size.width() * float(x0)
+        y1_resized = size.height() * float(1.0 - y1)
+        self.box_widget.setRect(x0_resized, y1_resized, width, height)

+
+
+

+[docs]
+    @staticmethod
+    def create_axes(fig, x0, y0, x1, y1, **kwargs):
+        """
+        Create an axes for the given `fig`
+
+        Parameters
+        ----------
+        fig: int or None
+            The figure number. If None, a new figure number will be used
+        x0: float
+            the x-coordinate of the lower left corner (between 0 and 1)
+        y0: float
+            the y-coordinate of the lower left corner (between 0 and 1)
+        x1: float
+            the x-coordinate of the upper right corner (between 0 and 1)
+        y1: float
+            the y-coordinate of the upper right corner (between 0 and 1)
+        ``**kwargs``
+            Any other keyword argument for the
+            :meth:`matplotlib.figure.Figure.add_axes` method
+        """
+        if not isinstance(fig, mpl.figure.Figure):
+            import matplotlib.pyplot as plt
+
+            fig = plt.figure(
+                fig
+                or next(
+                    num
+                    for num in range(1, 1000)
+                    if num not in plt.get_fignums()
+                )
+            )
+        x1 = max([x0, x1])
+        y1 = max([y0, y1])
+        bbox = mpl.transforms.Bbox.from_extents(x0, y0, x1, y1)
+        points = np.round(bbox.get_points(), 5)
+        for ax in fig.axes:
+            if (np.round(ax.get_position().get_points(), 5) == points).all():
+                return ax
+        return fig.add_axes(bbox, **kwargs)

+
+
+

+[docs]
+    def get_iter(self):
+        """Get the iterator over the axes"""
+        fig_text = self.fig_edit.text()
+        if fig_text:
+            figs = repeat(fig_text)
+        else:
+            import matplotlib.pyplot as plt
+
+            figs = map(
+                str,
+                (
+                    num
+                    for num in range(1, 1000)
+                    if num not in plt.get_fignums()
+                ),
+            )
+        left = self.x0_edit.text() or "0.125"
+        bottom = self.y0_edit.text() or "0.1"
+        width = self.x1_edit.text() or "0.9"
+        height = self.y1_edit.text() or "0.9"
+        return (
+            "(%s, %s, %s, %s, %s)" % (fig, left, bottom, width, height)
+            for fig in figs
+        )

+

+
+
+
+

+[docs]
+class AxesSelector(QWidget):
+    """Widget to select an already created axes
+
+    Click the button, select your axes and click the button again"""
+
+    def __init__(self, *args, **kwargs):
+        super(AxesSelector, self).__init__(*args, **kwargs)
+        self.bt_choose = QPushButton("Click to select axes", self)
+        self.bt_choose.setCheckable(True)
+        self.msg_label = QLabel("", self)
+
+        self.result_label = QLabel("", self)
+
+        self.layout = QVBoxLayout()
+        self.layout.addWidget(self.bt_choose)
+        self.layout.addWidget(self.msg_label)
+        self.layout.addWidget(self.result_label)
+
+        self.setLayout(self.layout)
+
+        self.bt_choose.clicked.connect(self.change_pickers)
+
+

+[docs]
+    def change_pickers(self, b):
+        """Change the pickers of the axes instances
+
+        If the push button is clicked, we replace the existing pickers of the
+        axes in order to select the plots. Otherwise we restore them"""
+        if self.bt_choose.isChecked():
+            self.bt_choose.setText("Click when finished")
+            self.msg_label.setText("Select an existing axes")
+            self.result_label.setText("")
+            self.allow_axes_select()
+        else:
+            self.bt_choose.setText("Select an axes")
+            self.msg_label.setText("")
+            self.restore_pickers()

+
+
+

+[docs]
+    def unclick(self):
+        """Restore the original pickers"""
+        if self.bt_choose.isChecked():
+            self.bt_choose.click()

+
+
+

+[docs]
+    def allow_axes_select(self):
+        """Replace make all axes pickable"""
+        import matplotlib.pyplot as plt
+
+        self.fig_events = d = {}
+        self.pickers = pickers = defaultdict(dict)
+        for num in plt.get_fignums():
+            fig = plt.figure(num)
+            d[num] = fig.canvas.mpl_connect("pick_event", self.get_picked_ax)
+            for ax in fig.axes:
+                pickers[num][ax] = ax.get_picker()
+                ax.set_picker(True)

+
+
+

+[docs]
+    def restore_pickers(self):
+        """Restore the original pickers of the existing axes instances"""
+        import matplotlib.pyplot as plt
+
+        for num, cid in self.fig_events.items():
+            plt.figure(num).canvas.mpl_disconnect(cid)
+            for artist, picker in self.pickers[num].items():
+                artist.set_picker(picker)
+        self.fig_events.clear()
+        self.pickers.clear()

+
+
+

+[docs]
+    def get_picked_ax(self, event):
+        """Function to be called when an axes is picked"""
+        try:
+            ax = event.artist.axes
+        except AttributeError:
+            ax = event.artist.get_axes()
+        text = self.result_label.text()
+        if text:
+            text += ";;"
+        self.result_label.setText(text + self.inspect_axes(ax))

+
+
+

+[docs]
+    def inspect_axes(self, ax):
+        """Inspect the given axes and get the right string for making a plot
+        with it"""
+        from matplotlib.axes import SubplotBase
+
+        if isinstance(ax, SubplotBase):
+            ss = ax.get_subplotspec()
+            gs = ss.get_gridspec()
+            rows, cols = gs.get_geometry()
+            return "(%i, %i, %i, %i, %i)" % (
+                ax.get_figure().number,
+                rows,
+                cols,
+                ss.num1 + 1,
+                (ss.num2 or ss.num1) + 1,
+            )
+        else:
+            box = ax.get_position()
+            points = np.round(box.get_points().ravel(), 5).tolist()
+            return "(%i, %1.5f, %1.5f, %1.5f, %1.5f)" % tuple(
+                [ax.get_figure().number] + points
+            )

+
+
+

+[docs]
+    def setVisible(self, b):
+        """Reimplemented to restore the pickers if the widget is made invisible"""
+        super(AxesSelector, self).setVisible(b)
+        if not self.isVisible():
+            self.unclick()

+
+
+

+[docs]
+    def close(self):
+        """Reimplemented to restore the pickers if the widget is closed"""
+        self.unclick()
+        return super(AxesSelector, self).close()

+
+
+

+[docs]
+    def get_iter(self):
+        """Get the iterator over the axes"""
+        return (txt for txt in cycle(self.result_label.text().split(";;")))

+

+
+
+
+

+[docs]
+class AxesCreatorCollection(QDialog):
+    """Wrapper for a QToolBox that holds the different possibilities to select
+    an axes
+
+    When the user finished, the :attr:`okpressed` symbol is emitted with an
+    infinite iterator of strings. Possible widgets for the toolbox are
+    determined by the :attr:`widgets` attribute"""
+
+    #: signal that is emitted when the 'Ok' pushbutton is pressed and the user
+    #: finished the selection
+    okpressed = QtCore.pyqtSignal(types.GeneratorType)
+
+    #: key, title and class fot the widget that is used to create an
+    #: axes
+    widgets = [
+        ("subplot", "Subplot in a grid", SubplotCreator),
+        ("axes", "Arbitray position", AxesCreator),
+        ("choose", "Existing subplot", AxesSelector),
+    ]
+
+    def __init__(self, key=None, func_kwargs={}, *args, **kwargs):
+        """
+        Parameters
+        ----------
+        key: str or None
+            if string, it must be one of the keys in the :attr:`widgets`
+            attribute
+        func_kwargs: dict
+            a dictionary that is passed to the class constructor determined by
+            the `key` parameter if `key` is not None
+        ``*args,**kwargs``
+            Determined by the QWidget class"""
+        super(AxesCreatorCollection, self).__init__(*args, **kwargs)
+        self.bt_cancel = QPushButton("Cancel", self)
+        self.bt_ok = QPushButton("Ok", self)
+
+        self.tb = QTabWidget(self)
+        self.tb.setTabPosition(QTabWidget.West)
+        current = 0
+        for i, (func_name, title, cls) in enumerate(self.widgets):
+            if func_name == key:
+                current = i
+                w = cls(**func_kwargs)
+            else:
+                w = cls()
+            self.tb.addTab(w, title)
+
+        self.tb.setCurrentIndex(current)
+
+        self.bt_ok.clicked.connect(self.create_subplot)
+        self.bt_ok.clicked.connect(self.close)
+        self.bt_cancel.clicked.connect(self.close)
+
+        layout = QVBoxLayout()
+        layout.addWidget(self.tb)
+
+        hbox = QHBoxLayout()
+        hbox.addStretch(0)
+        hbox.addWidget(self.bt_cancel)
+        hbox.addWidget(self.bt_ok)
+        layout.addLayout(hbox)
+
+        self.setLayout(layout)
+
+

+[docs]
+    def create_subplot(self):
+        """Method that is called whenn the ok button is pressed.
+
+        It emits the :attr:`okpressed` signal with the iterator of the current
+        widget in the toolbox"""
+        it = self.tb.currentWidget().get_iter()
+        self.okpressed.emit(it)

+
+
+

+[docs]
+    def close(self):
+        """reimplemented to make sure that all widgets are closed when this one
+        is closed"""
+        for w in map(self.tb.widget, range(len(self.widgets))):
+            w.close()
+        return super(AxesCreatorCollection, self).close()

+

+
+
+
+

+[docs]
+class PlotCreator(QDialog):
+    """
+    Widget to extract data from a dataset and eventually create a plot"""
+
+    #: Tooltip for not making a plot
+    NO_PM_TT = "Choose a plot method (or choose none to only extract the data)"
+
+    _preset = None
+
+    _decoder = None
+
+    def __init__(self, *args, **kwargs):
+        self.help_explorer = kwargs.pop("help_explorer", None)
+        super(PlotCreator, self).__init__(*args, **kwargs)
+        self.setAttribute(Qt.WA_DeleteOnClose)
+        self.setWindowTitle("Create plots")
+        self.error_msg = PyErrorMessage(self)
+        mp = psy.gcp(True)
+
+        self.splitter = splitter = QSplitter(Qt.Vertical, parent=self)
+        self.w = w = QWidget(self)
+        self.fmt_tree_widget = QWidget(self)
+
+        # ---------------------------------------------------------------------
+        # -------------------------- children ---------------------------------
+        # ---------------------------------------------------------------------
+
+        self.ds_combo = QComboBox(parent=w)
+        self.ds_combo.setToolTip("The data source to use the data from")
+        self.fill_ds_combo(mp)
+        self.bt_open_file = QToolButton(parent=w)
+        self.bt_open_file.setIcon(QIcon(get_icon("run_arrow.png")))
+        self.bt_open_file.setToolTip("Open a new dataset from the hard disk")
+        self.bt_get_ds = LoadFromConsoleButton(xarray.Dataset, parent=w)
+        self.bt_get_ds.setToolTip(
+            "Use a dataset already defined in the console"
+        )
+
+        self.pm_label = QLabel("Plot method: ", w)
+        self.pm_combo = QComboBox(w)
+        self.fill_plot_method_combo()
+        self.bt_load_preset = QPushButton("Preset")
+        self.bt_load_preset.setEnabled(False)
+        self.pm_info = QToolButton(w)
+        self.pm_info.setIcon(QIcon(get_icon("info.png")))
+        self.pm_info.setToolTip("Show information in the help explorer")
+
+        self.variables_table = VariablesTable(self.get_ds, parent=w)
+        self.variables_table.fill_from_ds()
+
+        self.coords_table = CoordsTable(self.get_ds, parent=w)
+        self.coords_table.fill_from_ds()
+
+        self.array_table = ArrayTable(self.get_ds, parent=w)
+        self.array_table.setup_from_ds(plot_method=self.pm_combo.currentText())
+
+        self.cbox_load = QCheckBox("load")
+        self.cbox_load.setToolTip(
+            "Load the selected data arrays into memory when clicking on "
+            "<em>Ok</em>. Note that this might cause problems for large "
+            "arrays!"
+        )
+
+        self.cbox_close_popups = QCheckBox("close dropdowns", w)
+        self.cbox_close_popups.setChecked(True)
+        self.cbox_close_popups.setToolTip(
+            "Close drop down menues after selecting indices to plot"
+        )
+        self.cbox_use_coords = QCheckBox("show coordinates", w)
+        self.cbox_use_coords.setChecked(False)
+        self.cbox_use_coords.setToolTip(
+            "Show the real coordinates instead of the indices in the drop "
+            "down menues"
+        )
+        self.bt_remove_all = QToolButton(w)
+        self.bt_remove_all.setIcon(QIcon(get_icon("minusminus.png")))
+        self.bt_remove_all.setToolTip("Remove all arrays")
+        self.bt_remove = QToolButton(w)
+        self.bt_remove.setIcon(QIcon(get_icon("minus.png")))
+        self.bt_remove.setToolTip("Remove selected arrays")
+        self.bt_add = QToolButton(w)
+        self.bt_add.setIcon(QIcon(get_icon("plus.png")))
+        self.bt_add.setToolTip("Add arrays for the selected variables")
+        self.bt_add_all = QToolButton(w)
+        self.bt_add_all.setIcon(QIcon(get_icon("plusplus.png")))
+        self.bt_add_all.setToolTip(
+            "Add arrays for all variables in the dataset"
+        )
+
+        self.rows_axis_label = QLabel("No. of rows", w)
+        self.rows_axis_edit = QLineEdit(w)
+        self.rows_axis_edit.setText("1")
+        self.cols_axis_label = QLabel("No. sof columns", w)
+        self.cols_axis_edit = QLineEdit(w)
+        self.cols_axis_edit.setText("1")
+        self.max_axis_label = QLabel("No. of axes per figure", w)
+        self.max_axis_edit = QLineEdit(w)
+        self.bt_add_axes = QPushButton("Add new subplots", w)
+        self.bt_add_axes.setToolTip(
+            "Adds subplots for the selected arrays based the specified number "
+            "of rows and columns"
+        )
+
+        self.row_axis_label = QLabel("Row number:", w)
+        self.row_axis_edit = QLineEdit(w)
+        self.row_axis_edit.setText("1")
+        self.col_axis_label = QLabel("Column number", w)
+        self.col_axis_edit = QLineEdit(w)
+        self.col_axis_edit.setText("1")
+        self.bt_add_single_axes = QPushButton("Add one subplot", w)
+        self.bt_add_single_axes.setToolTip(
+            "Add one subplot for the specified row and column"
+        )
+
+        self.fmt_tree_label = QLabel(
+            "Modify the formatoptions of the newly created plots."
+            "Values must be entered in yaml syntax",
+            parent=self.fmt_tree_widget,
+        )
+
+        self.fmt_tree = RcParamsTree(
+            None, None, None, parent=self.fmt_tree_widget
+        )
+        self.fmt_tree.value_col = 3
+        self.fmt_tree.setColumnCount(4)
+        self.fmt_tree.setHeaderLabels(["Formatoption", "", "", "Value"])
+
+        # ---------------------------------------------------------------------
+        # ---------------------------- connections ----------------------------
+        # ---------------------------------------------------------------------
+
+        # ----------------- dataset combo connections ------------------------
+        self.bt_open_file.clicked.connect(lambda: self.open_dataset())
+        self.bt_get_ds.object_loaded.connect(self.add_new_ds)
+        self.ds_combo.currentIndexChanged[int].connect(self.set_ds)
+
+        self.ds_combo.currentIndexChanged[int].connect(
+            lambda i: self.variables_table.fill_from_ds()
+        )
+        self.ds_combo.currentIndexChanged[int].connect(
+            lambda i: self.coords_table.fill_from_ds()
+        )
+        self.ds_combo.currentIndexChanged[int].connect(
+            lambda i: self.array_table.setup_from_ds()
+        )
+        self.ds_combo.currentIndexChanged[int].connect(
+            lambda i: self.connect_combo_boxes()
+        )
+
+        # ------------------- plot method connections -------------------------
+        self.pm_combo.currentIndexChanged[str].connect(
+            lambda s: (
+                self.pm_combo.setToolTip(getattr(psy.plot, s)._summary)
+                if s
+                else self.NO_PM_TT
+            )
+        )
+        self.pm_info.clicked.connect(self.show_pm_info)
+        self.pm_combo.currentIndexChanged[str].connect(self.array_table.set_pm)
+        self.pm_combo.currentIndexChanged[str].connect(self.fill_fmt_tree)
+
+        # ------------------- preset button connections -----------------------
+        self.bt_load_preset.clicked.connect(self.load_preset)
+
+        # --------------------- Combo box connections -------------------------
+        self.cbox_close_popups.clicked.connect(self.toggle_close_popups)
+        self.cbox_use_coords.clicked.connect(self.reset_comboboxes)
+        # connect leftclick of combo boxes to create new arrays or update the
+        # selected
+        self.connect_combo_boxes()
+
+        # ----------------- add and remove button connections -----------------
+        self.bt_add.clicked.connect(
+            lambda b: self.insert_array(
+                variables=self.variables_table.selected_variables
+            )
+        )
+        self.bt_add_all.clicked.connect(
+            lambda b: self.insert_array(
+                variables=self.variables_table.variables
+            )
+        )
+        self.bt_remove_all.clicked.connect(
+            lambda b: self.array_table.remove_arrays(False)
+        )
+        self.bt_remove.clicked.connect(
+            lambda b: self.array_table.remove_arrays(True)
+        )
+
+        # ------------- axes creation connections -----------------------------
+        self.rows_axis_edit.returnPressed.connect(self.bt_add_axes.click)
+        self.cols_axis_edit.returnPressed.connect(self.bt_add_axes.click)
+        self.max_axis_edit.returnPressed.connect(self.bt_add_axes.click)
+        self.bt_add_axes.clicked.connect(self.setup_subplots)
+        self.row_axis_edit.returnPressed.connect(self.bt_add_single_axes.click)
+        self.col_axis_edit.returnPressed.connect(self.bt_add_single_axes.click)
+        self.bt_add_single_axes.clicked.connect(self.setup_subplot)
+
+        # -------------------- create and cancel connections ------------------
+        self.bbox = bbox = QDialogButtonBox(
+            QDialogButtonBox.Ok | QDialogButtonBox.Cancel
+        )
+        bbox.accepted.connect(self.create_plots)
+        bbox.rejected.connect(self.reject)
+
+        # -------------------- other connections ------------------------------
+        # allow only to select either variables or newly created arrays in
+        # order to control the behaviour of the combo box left click in
+        # self.insert_array_from_combo
+        self.array_table.itemSelectionChanged.connect(
+            self.variables_table.clearSelection
+        )
+        self.variables_table.itemSelectionChanged.connect(
+            self.array_table.clearSelection
+        )
+
+        # ---------------------------------------------------------------------
+        # ---------------------------- layouts --------------------------------
+        # ---------------------------------------------------------------------
+
+        self.ds_box = QHBoxLayout()
+        self.ds_box.addWidget(self.ds_combo)
+        self.ds_box.addWidget(self.bt_open_file)
+        self.ds_box.addWidget(self.bt_get_ds)
+
+        self.pm_box = QHBoxLayout()
+        self.pm_box.addStretch(0)
+        self.pm_box.addWidget(self.pm_label)
+        self.pm_box.addWidget(self.pm_combo)
+        self.pm_box.addWidget(self.bt_load_preset)
+        self.pm_box.addWidget(self.pm_info)
+
+        self.tree_box = QHBoxLayout()
+        self.tree_box.addStretch(0)
+        self.tree_box.addWidget(self.cbox_load)
+        self.tree_box.addWidget(self.cbox_close_popups)
+        self.tree_box.addWidget(self.cbox_use_coords)
+        self.tree_box.addWidget(self.bt_remove_all)
+        self.tree_box.addWidget(self.bt_remove)
+        self.tree_box.addWidget(self.bt_add)
+        self.tree_box.addWidget(self.bt_add_all)
+
+        self.axes_box = QGridLayout()
+        self.axes_box.addWidget(self.max_axis_label, 0, 0)
+        self.axes_box.addWidget(self.max_axis_edit, 0, 1)
+        self.axes_box.addWidget(self.rows_axis_label, 0, 2)
+        self.axes_box.addWidget(self.rows_axis_edit, 0, 3)
+        self.axes_box.addWidget(self.cols_axis_label, 0, 4)
+        self.axes_box.addWidget(self.cols_axis_edit, 0, 5)
+        self.axes_box.addWidget(self.bt_add_axes, 0, 6)
+        self.axes_box.addWidget(self.row_axis_label, 1, 2)
+        self.axes_box.addWidget(self.row_axis_edit, 1, 3)
+        self.axes_box.addWidget(self.col_axis_label, 1, 4)
+        self.axes_box.addWidget(self.col_axis_edit, 1, 5)
+        self.axes_box.addWidget(self.bt_add_single_axes, 1, 6)
+
+        self.vbox = QVBoxLayout()
+        self.vbox.addLayout(self.ds_box)
+        self.vbox.addLayout(self.pm_box)
+        self.vbox.addLayout(self.tree_box)
+        self.vbox.addWidget(self.variables_table)
+        self.vbox.addWidget(self.coords_table)
+        self.vbox.addWidget(self.array_table)
+        self.vbox.addLayout(self.axes_box)
+        self.vbox.addWidget(self.bbox)
+
+        w.setLayout(self.vbox)
+
+        fmt_tree_layout = QVBoxLayout()
+        fmt_tree_layout.addWidget(self.fmt_tree_label)
+        fmt_tree_layout.addWidget(self.fmt_tree)
+        self.fmt_tree_widget.setLayout(fmt_tree_layout)
+
+        splitter.addWidget(w)
+
+        splitter.addWidget(self.fmt_tree_widget)
+
+        hbox = QHBoxLayout(self)
+        hbox.addWidget(splitter)
+        self.setLayout(hbox)
+        self.fill_fmt_tree(self.pm_combo.currentText())
+
+

+[docs]
+    def toggle_close_popups(self):
+        """Change the automatic closing of popups"""
+        close_popups = self.cbox_close_popups.isChecked()
+        for cb in self.coords_table.combo_boxes:
+            cb.close_popups = close_popups

+
+
+

+[docs]
+    def reset_comboboxes(self):
+        """Clear all comboboxes"""
+        use_coords = self.cbox_use_coords.isChecked()
+        for cb in self.coords_table.combo_boxes:
+            cb.use_coords = use_coords
+            cb.clear()
+            cb._is_empty = True

+
+
+

+[docs]
+    def fill_fmt_tree(self, pm):
+        import psyplot.project as psy
+
+        self.fmt_tree.clear()
+        if not pm:
+            self.fmt_tree_widget.setVisible(False)
+            self.bt_load_preset.setEnabled(False)
+        else:
+            pm = getattr(psy.plot, pm)
+            plotter = pm.plotter_cls()
+            if self._preset:
+                plotter.update(
+                    psy.Project.extract_fmts_from_preset(self._preset, pm)
+                )
+            self.fmt_tree.rc = plotter
+            self.fmt_tree.validators = {
+                key: getattr(plotter, key).validate for key in plotter
+            }
+            self.fmt_tree.descriptions = {
+                key: getattr(plotter, key).name for key in plotter
+            }
+            self.fmt_tree.initialize()
+            icon = QIcon(get_icon("info.png"))
+            docs_funcs = {
+                key: partial(plotter.show_docs, key) for key in plotter
+            }
+            for item in self.fmt_tree.top_level_items:
+                key = item.text(0)
+                bt = QToolButton()
+                bt.setIcon(icon)
+                bt.clicked.connect(docs_funcs[key])
+                self.fmt_tree.setItemWidget(item, 2, bt)
+            self.fmt_tree.resizeColumnToContents(2)
+            self.fmt_tree_widget.setVisible(True)
+            self.bt_load_preset.setEnabled(True)

+
+
+

+[docs]
+    def setup_subplots(self):
+        """Method to be emitted to setup the subplots for the selected arrays
+        on new figures"""
+        rows = int(self.rows_axis_edit.text())
+        cols = int(self.cols_axis_edit.text())
+        maxn = int(self.max_axis_edit.text() or 0)
+        self.array_table.add_subplots(rows, cols, maxn)

+
+
+

+[docs]
+    def setup_subplot(self):
+        """Method to be emitted to setup one subplot at a specific location
+        for each of the selected arrays on separate (new) figures"""
+        rows = int(self.rows_axis_edit.text())
+        cols = int(self.cols_axis_edit.text())
+        row = int(self.row_axis_edit.text())
+        col = int(self.col_axis_edit.text())
+        self.array_table.add_single_subplot(rows, cols, row, col)

+
+
+

+[docs]
+    def show_pm_info(self):
+        """Shows info on the current plotting method in the help explorer"""
+        if self.help_explorer is None:
+            return
+        pm_name = self.pm_combo.currentText()
+        if pm_name:
+            self.help_explorer.show_help(
+                getattr(psy.plot, pm_name), "psyplot.project.plot." + pm_name
+            )
+        else:
+            self.help_explorer.show_rst(
+                """
+            No plot
+            =======
+            No plot will be created, only the data is extracted""",
+                "no_plot",
+            )

+
+
+

+[docs]
+    def connect_combo_boxes(self):
+        for cb in self.coords_table.combo_boxes:
+            cb.leftclick.connect(self.insert_array_from_combo)

+
+
+

+[docs]
+    def fill_plot_method_combo(self):
+        """Takes the names of the plotting methods in the current project"""
+        self.pm_combo.addItems([""] + sorted(psy.plot._plot_methods))
+        self.pm_combo.setToolTip(self.NO_PM_TT)

+
+
+

+[docs]
+    def set_pm(self, plot_method):
+        self.pm_combo.setCurrentIndex(
+            self.pm_combo.findText(plot_method or "")
+        )

+
+
+

+[docs]
+    def create_plots(self):
+        """Method to be called when the `Create plot` button is pressed
+
+        This method reads the data from the :attr:`array_table` attribute and
+        makes the plot (or extracts the data) based upon the
+        :attr:`plot_method` attribute"""
+        import matplotlib.pyplot as plt
+
+        names = self.array_table.arr_names_dict
+        pm = self.pm_combo.currentText()
+        if pm:
+            pm = getattr(psy.plot, pm)
+            for d, (default_dim, default_slice) in product(
+                six.itervalues(names), six.iteritems(pm._default_dims)
+            ):
+                d.setdefault(default_dim, default_slice)
+            kwargs = {
+                "ax": self.array_table.axes,
+                "fmt": {t[1]: t[2] for t in self.fmt_tree._get_rc()},
+            }
+        else:
+            pm = self.open_data
+            kwargs = {}
+        fig_nums = plt.get_fignums()[:]
+        try:
+            pm(
+                self.ds,
+                arr_names=names,
+                load=self.cbox_load.isChecked(),
+                decoder=self._decoder,
+                **kwargs,
+            )
+        except Exception:
+            for num in set(plt.get_fignums()).difference(fig_nums):
+                plt.close(num)
+            self.error_msg.showTraceback("<b>Failed to create the plots!</b>")
+            logger.debug(
+                "Error while creating the plots with %s!", names, exc_info=True
+            )
+        else:
+            self.close()

+
+
+

+[docs]
+    def load_preset(self):
+        """Load a preset file"""
+        fname, ok = QFileDialog.getOpenFileName(
+            self,
+            "Load preset",
+            os.path.join(get_configdir(), "presets"),
+            "YAML files (*.yml *.yaml);;" "All files (*)",
+        )
+        if ok:
+            self.set_preset(fname)

+
+
+

+[docs]
+    def open_dataset(self, fnames=None, *args, **kwargs):
+        """Opens a file dialog and the dataset that has been inserted"""
+
+        def open_ds():
+            if len(fnames) == 1:
+                kwargs.pop("concat_dim", None)
+                return psy.open_dataset(fnames[0], *args, **kwargs)
+            else:
+                return psy.open_mfdataset(fnames, *args, **kwargs)
+
+        if fnames is None:
+            fnames = QFileDialog.getOpenFileNames(
+                self,
+                "Open dataset",
+                os.getcwd(),
+                "NetCDF files (*.nc *.nc4);;"
+                "Shape files (*.shp);;"
+                "All files (*)",
+            )
+            if with_qt5:  # the filter is passed as well
+                fnames = fnames[0]
+        if isinstance(fnames, xarray.Dataset):
+            ds = fnames
+            self.add_new_ds("ds", ds)
+        elif not fnames:
+            return
+        else:
+            try:
+                ds = open_ds()
+            except Exception:
+                kwargs["decode_times"] = False
+                try:
+                    ds = open_ds()
+                except Exception:
+                    self.error_msg.showTraceback(
+                        "<b>Could not open dataset %s</b>" % (fnames,)
+                    )
+                    return
+            fnames_str = ", ".join(fnames)
+            self.add_new_ds(fnames_str, ds, fnames_str)

+
+
+

+[docs]
+    def set_preset(self, preset):
+        import psyplot.project as psy
+
+        self._preset = psy.Project._load_preset(preset)
+        if self.fmt_tree_widget.isVisible():
+            self.fill_fmt_tree(self.pm_combo.currentText())

+
+
+

+[docs]
+    def set_decoder(self, decoder):
+        """Set the decoder for the new plots."""
+        self._decoder = decoder

+
+
+

+[docs]
+    def add_new_ds(self, oname, ds, fname=None):
+        d = {"ds": ds}
+        if fname:
+            d["fname"] = fname
+        self.ds_descs.insert(0, d)
+        self.ds_combo.insertItem(0, "New: " + oname)
+        self.ds_combo.setCurrentIndex(0)

+
+
+

+[docs]
+    def set_ds(self, i):
+        """Set the current dataset"""
+        self.ds = self.ds_descs[i]["ds"]

+
+
+

+[docs]
+    def fill_ds_combo(self, project):
+        """fill the dataset combobox with datasets of the current main project"""
+        self.ds_combo.clear()
+        self.ds_combo.setInsertPolicy(QComboBox.InsertAtBottom)
+        ds_descs = project._get_ds_descriptions(
+            project.array_info(ds_description="all")
+        )
+        self.ds_combo.addItems(
+            [
+                "%i: %s" % (i, ds_desc["fname"])
+                for i, ds_desc in six.iteritems(ds_descs)
+            ]
+        )
+        self.ds_descs = list(ds_descs.values())
+        if len(self.ds_descs):
+            self.set_ds(0)

+
+
+

+[docs]
+    def insert_array_from_combo(self, cb, variables=None):
+        """Insert new arrays into the dataset when the combobox is left-clicked"""
+        if variables is None:
+            variables = self.variables_table.selected_variables
+        dims = {}
+        for other_cb in self.coords_table.combo_boxes:
+            ind = other_cb.currentIndex()
+            dims[other_cb.dim] = str((ind - 1) if ind not in [-1, 0] else "")
+        dim = cb.dim
+        inserts = list(
+            str(ind.row() - 1)
+            for ind in cb.view().selectionModel().selectedIndexes()
+            if ind.row() > 0
+        )
+        dims.pop(dim)
+        for name, val in product(variables, inserts):
+            dims[dim] = val
+            self.array_table.insert_array(name, check=False, **dims)
+        if len(inserts) > 1:
+            inserts = "%s:%s" % (min(inserts), max(inserts))
+        elif inserts:
+            inserts = inserts[0]
+        else:
+            return
+        self.array_table.update_selected(check=False, dims={dim: inserts})
+        self.array_table.check_arrays()

+
+
+

+[docs]
+    def insert_array(self, variables=None):
+        """Inserts an array for the given variables (or the ones selected in
+        the :attr:`variable_table` if `variables` is None)
+        """
+        if variables is None:
+            variables = self.variables_table.selected_variables
+        dims = {}
+        for other_cb in self.coords_table.combo_boxes:
+            ind = other_cb.currentIndex()
+            dims[other_cb.dim] = str((ind - 1) if ind not in [-1, 0] else "")
+        for name in variables:
+            self.array_table.insert_array(name, check=False, **dims)
+        self.array_table.check_arrays()

+
+
+

+[docs]
+    def get_ds(self, i=None):
+        """Get the dataset
+
+        Parameters
+        ----------
+        i: int or None
+            If None, the dataset of the current index in the `ds_combo` is
+            returned. Otherwise it specifies the locdation of the dictionary in
+            the :attr:`ds_descs` attribute
+
+        Returns
+        -------
+        xarray.Dataset
+            The requested dataset"""
+        if i is None:
+            i = self.ds_combo.currentIndex()
+        if not len(self.ds_descs):
+            return
+        return self.ds_descs[i]["ds"]

+
+
+

+[docs]
+    def close(self, *args, **kwargs):
+        """Reimplemented to make sure that the data sets are deleted"""
+        super(PlotCreator, self).close(*args, **kwargs)
+        if hasattr(self, "ds_descs"):
+            del self.ds_descs

+
+
+

+[docs]
+    def open_data(self, *args, **kwargs):
+        """Convenience method to create a sub project without a plotter
+
+        This method is used when the :attr:`pm_combo` is empty"""
+        p = psy.Project.from_dataset(*args, main=psy.gcp(True), **kwargs)
+        psy.scp(p)

+
+
+

+[docs]
+    def switch2ds(self, ds):
+        """Switch to the given dataset
+
+        Parameters
+        ----------
+        ds: xarray.Dataset
+            The dataset to use. It is assumed that this dataset is already
+            in the dataset combobox"""
+        for i, desc in enumerate(self.ds_descs):
+            if desc["ds"] is ds:
+                self.ds_combo.setCurrentIndex(i)
+                return

+
+
+

+[docs]
+    def keyPressEvent(self, e):
+        """Reimplemented to close the window when escape is hitted"""
+        if e.key() == QtCore.Qt.Key_Escape:
+            self.close()
+        else:
+            super(PlotCreator, self).keyPressEvent(e)

+

+
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/preferences.html b/_modules/psyplot_gui/preferences.html new file mode 100644 index 0000000..a8e1426 --- /dev/null +++ b/_modules/psyplot_gui/preferences.html @@ -0,0 +1,1092 @@ + + + + + + psyplot_gui.preferences — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.preferences

+"""Preferences widget for psyplot_gui
+
+This module defines the :class:`Preferences` widget that creates an interface
+to the rcParams of psyplot and psyplot_gui"""
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+from warnings import warn
+
+import yaml
+from psyplot.config.rcsetup import RcParams, psyplot_fname
+from psyplot.config.rcsetup import rcParams as psy_rcParams
+
+from psyplot_gui import rcParams as rcParams
+from psyplot_gui.common import get_icon
+from psyplot_gui.compat.qtcompat import (
+    QAbstractItemView,
+    QAction,
+    QDialog,
+    QDialogButtonBox,
+    QFileDialog,
+    QHBoxLayout,
+    QIcon,
+    QLabel,
+    QListView,
+    QListWidget,
+    QListWidgetItem,
+    QMenu,
+    QPushButton,
+    QScrollArea,
+    QSplitter,
+    QStackedWidget,
+    Qt,
+    QtCore,
+    QTextEdit,
+    QtGui,
+    QToolButton,
+    QTreeWidget,
+    QTreeWidgetItem,
+    QVBoxLayout,
+    QWidget,
+    asstring,
+    with_qt5,
+)
+
+
+

+[docs]
+class ConfigPage(object):
+    """An abstract base class for configuration pages"""
+
+    #: A signal that shall be emitted if the validation state changes
+    validChanged = QtCore.pyqtSignal(bool)
+
+    #: A signal that is emitted if changes are propsed. The signal should be
+    #: emitted with the instance of the page itself
+    propose_changes = QtCore.pyqtSignal(object)
+
+    #: The title for the config page
+    title = None
+
+    #: The icon of the page
+    icon = None
+
+    #: :class:`bool` that is True, if the changes in this ConfigPage are set
+    #: immediately
+    auto_updates = False
+
+    @property
+    def is_valid(self):
+        """Check whether the page is valid"""
+        raise NotImplementedError
+
+    @property
+    def changed(self):
+        """Check whether the preferences will change"""
+        raise NotImplementedError
+
+

+[docs]
+    def initialize(self):
+        """Initialize the page"""
+        raise NotImplementedError

+
+
+

+[docs]
+    def apply_changes(self):
+        """Apply the planned changes"""
+        raise NotImplementedError

+

+
+
+
+

+[docs]
+class RcParamsTree(QTreeWidget):
+    """A QTreeWidget that can be used to display a RcParams instance
+
+    This widget is populated by a :class:`psyplot.config.rcsetup.RcParams`
+    instance and displays whether the values are valid or not"""
+
+    #: A signal that shall be emitted if the validation state changes
+    validChanged = QtCore.pyqtSignal(bool)
+
+    #: A signal that is emitted if changes are propsed. It is either emitted
+    #: with the parent of this instance (if this is not None) or with the
+    #: instance itself
+    propose_changes = QtCore.pyqtSignal(object)
+
+    #: The :class:`~psyplot.config.rcsetup.RcParams` to display
+    rc = None
+
+    #: list of :class:`bool`. A boolean for each rcParams key that states
+    #: whether the proposed value is valid or not
+    valid = []
+
+    value_col = 2
+
+    def __init__(self, rcParams, validators, descriptions, *args, **kwargs):
+        """
+        Parameters
+        ----------
+        rcParams: dict
+            The dictionary that contains the rcParams
+        validators: dict
+            A mapping from the `rcParams` key to the validation function for
+            the corresponding value
+        descriptions: dict
+            A mapping from the `rcParams` key to it's description
+
+        See Also
+        --------
+        psyplot.config.rcsetup.RcParams
+        psyplot.config.rcsetup.RcParams.validate
+        psyplot.config.rcsetup.RcParams.descriptions
+        """
+        super(RcParamsTree, self).__init__(*args, **kwargs)
+        self.rc = rcParams
+        self.validators = validators
+        self.descriptions = descriptions
+        self.setContextMenuPolicy(Qt.CustomContextMenu)
+        self.customContextMenuRequested.connect(self.open_menu)
+        self.setColumnCount(self.value_col + 1)
+        self.setHeaderLabels(["RcParams key", "", "Value"])
+
+    @property
+    def is_valid(self):
+        """True if all the proposed values in this tree are valid"""
+        return all(self.valid)
+
+    @property
+    def top_level_items(self):
+        """An iterator over the topLevelItems in this tree"""
+        return map(self.topLevelItem, range(self.topLevelItemCount()))
+
+

+[docs]
+    def initialize(self):
+        """Fill the items of the :attr:`rc` into the tree"""
+        rcParams = self.rc
+        descriptions = self.descriptions
+        self.valid = [True] * len(rcParams)
+        validators = self.validators
+        vcol = self.value_col
+        for i, (key, val) in enumerate(sorted(rcParams.items())):
+            item = QTreeWidgetItem(0)
+            item.setText(0, key)
+            item.setToolTip(0, key)
+            item.setIcon(1, QIcon(get_icon("valid.png")))
+            desc = descriptions.get(key)
+            if desc:
+                item.setText(vcol, desc)
+                item.setToolTip(vcol, desc)
+            child = QTreeWidgetItem(0)
+            item.addChild(child)
+            self.addTopLevelItem(item)
+            editor = QTextEdit(self)
+            # set maximal height of the editor to 3 rows
+            editor.setMaximumHeight(
+                4 * QtGui.QFontMetrics(editor.font()).height()
+            )
+            editor.setPlainText(yaml.dump(val))
+            self.setItemWidget(child, vcol, editor)
+            editor.textChanged.connect(
+                self.set_icon_func(i, item, validators[key])
+            )
+        self.resizeColumnToContents(0)
+        self.resizeColumnToContents(1)

+
+
+

+[docs]
+    def set_icon_func(self, i, item, validator):
+        """Create a function to change the icon of one topLevelItem
+
+        This method creates a function that can be called when the value of an
+        item changes to display it's valid state. The returned function changes
+        the icon of the given topLevelItem depending on
+        whether the proposed changes are valid or not and it modifies the
+        :attr:`valid` attribute accordingly
+
+        Parameters
+        ----------
+        i: int
+            The index of the topLevelItem
+        item: QTreeWidgetItem
+            The topLevelItem
+        validator: func
+            The validation function
+
+        Returns
+        -------
+        function
+            The function that can be called to set the correct icon"""
+
+        def func():
+            editor = self.itemWidget(item.child(0), self.value_col)
+            s = asstring(editor.toPlainText())
+            try:
+                val = yaml.load(s, Loader=yaml.Loader)
+            except Exception as e:
+                item.setIcon(1, QIcon(get_icon("warning.png")))
+                item.setToolTip(1, "Could not parse yaml code: %s" % e)
+                self.set_valid(i, False)
+                return
+            try:
+                validator(val)
+            except Exception as e:
+                item.setIcon(1, QIcon(get_icon("invalid.png")))
+                item.setToolTip(1, "Wrong value: %s" % e)
+                self.set_valid(i, False)
+            else:
+                item.setIcon(1, QIcon(get_icon("valid.png")))
+                self.set_valid(i, True)
+            self.propose_changes.emit(self.parent() or self)
+
+        return func

+
+
+

+[docs]
+    def set_valid(self, i, b):
+        """Set the validation status
+
+        If the validation status changed compared to the old one, the
+        :attr:`validChanged` signal is emitted
+
+        Parameters
+        ----------
+        i: int
+            The index of the topLevelItem
+        b: bool
+            The valid state of the item
+        """
+        old = self.is_valid
+        self.valid[i] = b
+        new = self.is_valid
+        if new is not old:
+            self.validChanged.emit(new)

+
+
+

+[docs]
+    def open_menu(self, position):
+        """Open a menu to expand and collapse all items in the tree
+
+        Parameters
+        ----------
+        position: QPosition
+            The position where to open the menu"""
+        menu = QMenu()
+        expand_all_action = QAction("Expand all", self)
+        expand_all_action.triggered.connect(self.expandAll)
+        menu.addAction(expand_all_action)
+        collapse_all_action = QAction("Collapse all", self)
+        collapse_all_action.triggered.connect(self.collapseAll)
+        menu.addAction(collapse_all_action)
+        menu.exec_(self.viewport().mapToGlobal(position))

+
+
+

+[docs]
+    def changed_rc(self, use_items=False):
+        """Iterate over the changed rcParams
+
+        Parameters
+        ----------
+        use_items: bool
+            If True, the topLevelItems are used instead of the keys
+
+        Yields
+        ------
+        QTreeWidgetItem or str
+            The item identifier
+        object
+            The proposed value"""
+
+        def equals(item, key, val, orig):
+            return val != orig
+
+        for t in self._get_rc(equals):
+            yield t[0 if use_items else 1], t[2]

+
+
+

+[docs]
+    def selected_rc(self, use_items=False):
+        """Iterate over the selected rcParams
+
+        Parameters
+        ----------
+        use_items: bool
+            If True, the topLevelItems are used instead of the keys
+
+        Yields
+        ------
+        QTreeWidgetItem or str
+            The item identifier
+        object
+            The proposed value"""
+
+        def is_selected(item, key, val, orig):
+            return item.isSelected()
+
+        for t in self._get_rc(is_selected):
+            yield t[0 if use_items else 1], t[2]

+
+
+    def _get_rc(self, filter_func=None):
+        """Iterate over the rcParams
+
+        This function applies the given `filter_func` to check whether the
+        item should be included or not
+
+        Parameters
+        ----------
+        filter_func: function
+            A function that accepts the following arguments:
+
+            item
+                The QTreeWidgetItem
+            key
+                The rcParams key
+            val
+                The proposed value
+            orig
+                The current value
+
+        Yields
+        ------
+        QTreeWidgetItem
+            The corresponding topLevelItem
+        str
+            The rcParams key
+        object
+            The proposed value
+        object
+            The current value
+        """
+
+        def no_check(item, key, val, orig):
+            return True
+
+        rc = self.rc
+        filter_func = filter_func or no_check
+        for item in self.top_level_items:
+            key = asstring(item.text(0))
+            editor = self.itemWidget(item.child(0), self.value_col)
+            val = yaml.load(asstring(editor.toPlainText()), Loader=yaml.Loader)
+            try:
+                val = rc.validate[key](val)
+            except Exception:
+                pass
+            try:
+                include = filter_func(item, key, val, rc[key])
+            except Exception:
+                warn("Could not check state for %s key" % key, RuntimeWarning)
+            else:
+                if include:
+                    yield (item, key, val, rc[key])
+
+

+[docs]
+    def apply_changes(self):
+        """Update the :attr:`rc` with the proposed changes"""
+        new = dict(self.changed_rc())
+        if new != self.rc:
+            self.rc.update(new)

+
+
+

+[docs]
+    def select_changes(self):
+        """Select all the items that changed comparing to the current rcParams"""
+        for item, val in self.changed_rc(True):
+            item.setSelected(True)

+

+
+
+
+

+[docs]
+class RcParamsWidget(ConfigPage, QWidget):
+    """A configuration page for RcParams instances
+
+    This page displays the :class:`psyplot.config.rcsetup.RcParams` instance in
+    the :attr:`rc` attribute and let's the user modify it.
+
+    Notes
+    -----
+    After the initialization, you have to call the :meth:`initialize` method"""
+
+    #: the rcParams to use (must be implemented by subclasses)
+    rc = None
+
+    #: the :class:`RcParamsTree` that is used to display the rcParams
+    tree = None
+
+    @property
+    def propose_changes(self):
+        """A signal that is emitted if the user changes the values in the
+        rcParams"""
+        return self.tree.propose_changes
+
+    @property
+    def validChanged(self):
+        """A signal that is emitted if the user changes the valid state of this
+        page"""
+        return self.tree.validChanged
+
+    @property
+    def changed(self):
+        """True if any changes are proposed by this config page"""
+        return bool(next(self.tree.changed_rc(), None))
+
+    @property
+    def is_valid(self):
+        """True if all the settings are valid"""
+        return self.tree.is_valid
+
+    @property
+    def icon(self):
+        """The icon of this instance in the :class:`Preferences` dialog"""
+        return QIcon(get_icon("rcParams.png"))
+
+    def __init__(self, *args, **kwargs):
+        super(RcParamsWidget, self).__init__(*args, **kwargs)
+        self.vbox = vbox = QVBoxLayout()
+
+        self.description = QLabel(
+            "<p>Modify the rcParams for your need. Changes will not be applied"
+            " until you click the Apply or Ok button.</p>"
+            "<p>Values must be entered in yaml syntax</p>",
+            parent=self,
+        )
+        vbox.addWidget(self.description)
+        self.tree = tree = RcParamsTree(
+            self.rc,
+            getattr(self.rc, "validate", None),
+            getattr(self.rc, "descriptions", None),
+            parent=self,
+        )
+        tree.setSelectionMode(QAbstractItemView.MultiSelection)
+        vbox.addWidget(self.tree)
+
+        self.bt_select_all = QPushButton("Select All", self)
+        self.bt_select_changed = QPushButton("Select changes", self)
+        self.bt_select_none = QPushButton("Clear Selection", self)
+        self.bt_export = QToolButton(self)
+        self.bt_export.setText("Export Selection...")
+        self.bt_export.setToolTip("Export the selected rcParams to a file")
+        self.bt_export.setPopupMode(QToolButton.InstantPopup)
+        self.export_menu = export_menu = QMenu(self)
+        export_menu.addAction(self.save_settings_action())
+        export_menu.addAction(self.save_settings_action(True))
+        self.bt_export.setMenu(export_menu)
+        hbox = QHBoxLayout()
+        hbox.addWidget(self.bt_select_all)
+        hbox.addWidget(self.bt_select_changed)
+        hbox.addWidget(self.bt_select_none)
+        hbox.addStretch(1)
+        hbox.addWidget(self.bt_export)
+        vbox.addLayout(hbox)
+
+        self.setLayout(vbox)
+
+        self.bt_select_all.clicked.connect(self.tree.selectAll)
+        self.bt_select_none.clicked.connect(self.tree.clearSelection)
+        self.bt_select_changed.clicked.connect(self.tree.select_changes)
+
+

+[docs]
+    def save_settings_action(self, update=False, target=None):
+        """Create an action to save the selected settings in the :attr:`tree`
+
+        Parameters
+        ----------
+        update: bool
+            If True, it is expected that the file already exists and it will be
+            updated. Otherwise, existing files will be overwritten
+        """
+
+        def func():
+            if update:
+                meth = QFileDialog.getOpenFileName
+            else:
+                meth = QFileDialog.getSaveFileName
+            if target is None:
+                fname = meth(
+                    self,
+                    "Select a file to %s" % ("update" if update else "create"),
+                    self.default_path,
+                    "YAML files (*.yml);;" "All files (*)",
+                )
+                if with_qt5:  # the filter is passed as well
+                    fname = fname[0]
+            else:
+                fname = target
+            if not fname:
+                return
+            if update:
+                rc = self.rc.__class__(defaultParams=self.rc.defaultParams)
+                rc.load_from_file(fname)
+                old_keys = list(rc)
+                selected = dict(self.tree.selected_rc())
+                new_keys = list(selected)
+                rc.update(selected)
+                rc.dump(
+                    fname, include_keys=old_keys + new_keys, exclude_keys=[]
+                )
+            else:
+                rc = self.rc.__class__(
+                    self.tree.selected_rc(),
+                    defaultParams=self.rc.defaultParams,
+                )
+                rc.dump(fname, exclude_keys=[])
+
+        action = QAction("Update..." if update else "Overwrite...", self)
+        action.triggered.connect(func)
+        return action

+
+
+

+[docs]
+    def initialize(self, rcParams=None, validators=None, descriptions=None):
+        """Initialize the config page
+
+        Parameters
+        ----------
+        rcParams: dict
+            The rcParams to use. If None, the :attr:`rc` attribute of this
+            instance is used
+        validators: dict
+            A mapping from the `rcParams` key to the corresponding validation
+            function for the value. If None, the
+            :attr:`~psyplot.config.rcsetup.RcParams.validate` attribute of the
+            :attr:`rc` attribute is used
+        descriptions: dict
+            A mapping from the `rcParams` key to it's description. If None, the
+            :attr:`~psyplot.config.rcsetup.RcParams.descriptions` attribute of
+            the :attr:`rc` attribute is used"""
+        if rcParams is not None:
+            self.rc = rcParams
+            self.tree.rc = rcParams
+        if validators is not None:
+            self.tree.validators = validators
+        if descriptions is not None:
+            self.tree.descriptions = descriptions
+        self.tree.initialize()

+
+
+

+[docs]
+    def apply_changes(self):
+        """Apply the changes in the config page"""
+        self.tree.apply_changes()

+

+
+
+
+

+[docs]
+class GuiRcParamsWidget(RcParamsWidget):
+    """The config page for the :class:`psyplot_gui.config.rcsetup.rcParams`"""
+
+    rc = rcParams
+
+    title = "GUI defaults"
+
+    default_path = psyplot_fname(
+        "PSYPLOTGUIRC", "psyplotguirc.yml", if_exists=False
+    )

+
+
+
+

+[docs]
+class PsyRcParamsWidget(RcParamsWidget):
+    """The config page for the :class:`psyplot.config.rcsetup.rcParams`"""
+
+    rc = psy_rcParams
+
+    title = "psyplot defaults"
+
+    default_path = psyplot_fname(if_exists=False)

+
+
+
+

+[docs]
+class Prefences(QDialog):
+    """Preferences dialog"""
+
+    @property
+    def bt_apply(self):
+        return self.bbox.button(QDialogButtonBox.Apply)
+
+    @property
+    def pages(self):
+        return map(self.get_page, range(self.pages_widget.count()))
+
+    def __init__(self, main=None):
+        super(Prefences, self).__init__(parent=main)
+        self.setWindowTitle("Preferences")
+
+        # Widgets
+        self.pages_widget = QStackedWidget()
+        self.contents_widget = QListWidget()
+        self.bt_reset = QPushButton("Reset to defaults")
+        self.bt_load_plugins = QPushButton("Load plugin pages")
+        self.bt_load_plugins.setToolTip(
+            "Load the rcParams for the plugins in separate pages"
+        )
+
+        self.bbox = bbox = QDialogButtonBox(
+            QDialogButtonBox.Ok
+            | QDialogButtonBox.Apply
+            | QDialogButtonBox.Cancel
+        )
+
+        # Widgets setup
+        # Destroying the C++ object right after closing the dialog box,
+        # otherwise it may be garbage-collected in another QThread
+        # (e.g. the editor's analysis thread in Spyder), thus leading to
+        # a segmentation fault on UNIX or an application crash on Windows
+        self.setAttribute(Qt.WA_DeleteOnClose)
+        self.setWindowTitle("Preferences")
+        self.contents_widget.setMovement(QListView.Static)
+        self.contents_widget.setSpacing(1)
+        self.contents_widget.setCurrentRow(0)
+
+        # Layout
+        hsplitter = QSplitter()
+        hsplitter.addWidget(self.contents_widget)
+        hsplitter.addWidget(self.pages_widget)
+        hsplitter.setStretchFactor(1, 1)
+
+        btnlayout = QHBoxLayout()
+        btnlayout.addWidget(self.bt_reset)
+        btnlayout.addWidget(self.bt_load_plugins)
+        btnlayout.addStretch(1)
+        btnlayout.addWidget(bbox)
+
+        vlayout = QVBoxLayout()
+        vlayout.addWidget(hsplitter)
+        vlayout.addLayout(btnlayout)
+
+        self.setLayout(vlayout)
+
+        # Signals and slots
+        if main is not None:
+            self.bt_reset.clicked.connect(main.reset_rcParams)
+        self.bt_load_plugins.clicked.connect(self.load_plugin_pages)
+        self.pages_widget.currentChanged.connect(self.current_page_changed)
+        self.contents_widget.currentRowChanged.connect(
+            self.pages_widget.setCurrentIndex
+        )
+        bbox.accepted.connect(self.accept)
+        bbox.rejected.connect(self.reject)
+        self.bt_apply.clicked.connect(self.apply_clicked)
+        self.bt_apply.setEnabled(False)
+
+

+[docs]
+    def set_current_index(self, index):
+        """Set current page index"""
+        self.contents_widget.setCurrentRow(index)

+
+
+

+[docs]
+    def current_page_changed(self, index):
+        configpage = self.get_page(index)
+        self.bt_apply.setVisible(not configpage.auto_updates)
+        self.check_changes(configpage)

+
+
+

+[docs]
+    def get_page(self, index=None):
+        """Return page widget"""
+        if index is None:
+            widget = self.pages_widget.currentWidget()
+        else:
+            widget = self.pages_widget.widget(index)
+        return widget.widget()

+
+
+

+[docs]
+    def accept(self):
+        """Reimplement Qt method"""
+        for configpage in self.pages:
+            if not configpage.is_valid:
+                continue
+            configpage.apply_changes()
+        QDialog.accept(self)

+
+
+

+[docs]
+    def apply_clicked(self):
+        # Apply button was clicked
+        configpage = self.get_page()
+        if configpage.is_valid:
+            configpage.apply_changes()
+        self.check_changes(configpage)

+
+
+

+[docs]
+    def add_page(self, widget):
+        """Add a new page to the preferences dialog
+
+        Parameters
+        ----------
+        widget: ConfigPage
+            The page to add"""
+        widget.validChanged.connect(self.bt_apply.setEnabled)
+        widget.validChanged.connect(
+            self.bbox.button(QDialogButtonBox.Ok).setEnabled
+        )
+        scrollarea = QScrollArea(self)
+        scrollarea.setWidgetResizable(True)
+        scrollarea.setWidget(widget)
+        self.pages_widget.addWidget(scrollarea)
+        item = QListWidgetItem(self.contents_widget)
+        try:
+            item.setIcon(widget.icon)
+        except TypeError:
+            pass
+        item.setText(widget.title)
+        item.setFlags(Qt.ItemIsSelectable | Qt.ItemIsEnabled)
+        item.setSizeHint(QtCore.QSize(0, 25))
+        widget.propose_changes.connect(self.check_changes)

+
+
+

+[docs]
+    def check_changes(self, configpage):
+        """Enable the apply button if there are changes to the settings"""
+        if configpage != self.get_page():
+            return
+        self.bt_apply.setEnabled(
+            not configpage.auto_updates
+            and configpage.is_valid
+            and configpage.changed
+        )

+
+
+

+[docs]
+    def load_plugin_pages(self):
+        """Load the rcParams for the plugins in separate pages"""
+        validators = psy_rcParams.validate
+        descriptions = psy_rcParams.descriptions
+        for ep in psy_rcParams._load_plugin_entrypoints():
+            plugin = ep.load()
+            rc = getattr(plugin, "rcParams", None)
+            if rc is None:
+                rc = RcParams()
+            w = RcParamsWidget(parent=self)
+            w.title = "rcParams of " + ep.module
+            w.default_path = PsyRcParamsWidget.default_path
+            w.initialize(
+                rcParams=rc, validators=validators, descriptions=descriptions
+            )
+            # use the full rcParams after initialization
+            w.rc = psy_rcParams
+            self.add_page(w)

+

+
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/_modules/psyplot_gui/sphinx_supp/conf.html b/_modules/psyplot_gui/sphinx_supp/conf.html new file mode 100644 index 0000000..8066ecc --- /dev/null +++ b/_modules/psyplot_gui/sphinx_supp/conf.html @@ -0,0 +1,461 @@ + + + + + + psyplot_gui.sphinx_supp.conf — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for psyplot_gui.sphinx_supp.conf

+# -*- coding: utf-8 -*-
+#
+# psyplot documentation build configuration file, created by
+# sphinx-quickstart on Mon Jul 20 18:01:33 2015.
+#
+# This file is execfile()d with the current directory set to its
+# containing dir.
+#
+# Note that not all possible configuration values are present in this
+# autogenerated file.
+#
+# All configuration values have a default; values that are commented out
+# serve to show the default.
+
+# SPDX-FileCopyrightText: 2016-2024 University of Lausanne
+# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht
+# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: LGPL-3.0-only
+
+import re
+import sys
+from itertools import product
+
+import psyplot_gui
+
+# -- General configuration ------------------------------------------------
+
+# Add any Sphinx extension module names here, as strings. They can be
+# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
+# ones.
+extensions = [
+    "sphinx.ext.autosummary",
+    "sphinx.ext.todo",
+    "sphinx.ext.viewcode",
+    "psyplot.sphinxext.extended_napoleon",
+]
+
+if psyplot_gui.rcParams["help_explorer.use_intersphinx"] is None:
+    if sys.platform.startswith("win"):
+        use_intersphinx = False
+    else:
+        use_intersphinx = psyplot_gui.rcParams["help_explorer.online"]
+else:
+    use_intersphinx = psyplot_gui.rcParams["help_explorer.use_intersphinx"]
+
+if use_intersphinx:
+    extensions.append("sphinx.ext.intersphinx")
+del use_intersphinx
+
+autodoc_default_options = {"show_inheritance": True}
+
+try:
+    import autodocsumm  # noqa: F401
+except ImportError:
+    pass
+else:
+    extensions.append("autodocsumm")
+    autodoc_default_options["autosummary"] = True
+    not_document_data = [
+        "psyplot.config.rcsetup.defaultParams",
+        "psyplot.config.rcsetup.rcParams",
+    ]
+
+# Add any paths that contain templates here, relative to this directory.
+templates_path = ["_templates"]
+
+napoleon_use_admonition_for_examples = True
+
+# The suffix(es) of source filenames.
+# You can specify multiple suffix as a list of string:
+source_suffix = ".rst"
+
+# The encoding of source files.
+# source_encoding = 'utf-8-sig'
+
+# The master toctree document.
+master_doc = "psyplot"
+
+autoclass_content = "both"
+
+# General information about the project.
+project = "psyplot Help"
+copyright = psyplot_gui.__copyright__
+author = psyplot_gui.__author__
+
+# The version info for the project you're documenting, acts as replacement for
+# |version| and |release|, also used in various other places throughout the
+# built documents.
+#
+# The short X.Y version.
+version = re.match(r"\d+\.\d+\.\d+", psyplot_gui.__version__).group()
+# The full version, including alpha/beta/rc tags.
+release = psyplot_gui.__version__
+#
+# This is also used if you do content translation via gettext catalogs.
+# Usually you set "language" from the command line for these cases.
+language = None
+
+# List of patterns, relative to source directory, that match files and
+# directories to ignore when looking for source files.
+exclude_patterns = ["_build"]
+
+# The name of the Pygments (syntax highlighting) style to use.
+pygments_style = "sphinx"
+
+
+# -- Options for HTML output ----------------------------------------------
+
+# The theme to use for HTML and HTML Help pages.  See the documentation for
+# a list of builtin themes.
+html_theme = "sphinx_rtd_theme"
+html_theme_options = {
+    "prev_next_buttons_location": None,
+    "collapse_navigation": False,
+}
+
+# Add any paths that contain custom static files (such as style sheets) here,
+# relative to this directory. They are copied after the builtin static files,
+# so a file named "default.css" will overwrite the builtin "default.css".
+html_static_path = ["_static"]
+
+# Output file base name for HTML help builder.
+htmlhelp_basename = "psyplotdoc"
+
+# Example configuration for intersphinx: refer to the Python standard library.
+intersphinx_mapping = {
+    "pandas": ("https://pandas.pydata.org/pandas-docs/stable/", None),
+    "numpy": ("https://numpy.org/doc/stable/", None),
+    "matplotlib": ("https://matplotlib.org/", None),
+    "sphinx": ("https://www.sphinx-doc.org/en/master/", None),
+    "xarray": ("https://xarray.pydata.org/en/stable/", None),
+    "cartopy": ("https://scitools.org.uk/cartopy/docs/latest/", None),
+    "psyplot": ("https://psyplot.github.io/psyplot/", None),
+    "psyplot_gui": ("https://psyplot.github.io/psyplot-gui/", None),
+    "psy_maps": ("https://psyplot.github.io/psy-maps/", None),
+    "psy_simple": ("https://psyplot.github.io/psy-simple/", None),
+    "psy_view": ("https://psyplot.github.io/psy-view/", None),
+    "psy_reg": ("https://psyplot.github.io/psy-reg/", None),
+    "python": ("https://docs.python.org/3/", None),
+}
+
+replacements = {
+    "`psyplot.rcParams`": "`~psyplot.config.rcsetup.rcParams`",
+    "`psyplot.InteractiveList`": "`~psyplot.data.InteractiveList`",
+    "`psyplot.InteractiveArray`": "`~psyplot.data.InteractiveArray`",
+    "`psyplot.open_dataset`": "`~psyplot.data.open_dataset`",
+    "`psyplot.open_mfdataset`": "`~psyplot.data.open_mfdataset`",
+}
+
+
+
+
+
+
+

+[docs]
+def setup(app):
+    app.connect("autodoc-process-docstring", link_aliases)

+
+
+ +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/docs/api.rst b/_sources/api.rst.txt similarity index 100% rename from docs/api.rst rename to _sources/api.rst.txt diff --git a/_sources/api/psyplot_gui.backend.rst.txt b/_sources/api/psyplot_gui.backend.rst.txt new file mode 100644 index 0000000..3bf705a --- /dev/null +++ b/_sources/api/psyplot_gui.backend.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.backend + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.common.rst.txt b/_sources/api/psyplot_gui.common.rst.txt new file mode 100644 index 0000000..07cf1f4 --- /dev/null +++ b/_sources/api/psyplot_gui.common.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.common + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.compat.qtcompat.rst.txt b/_sources/api/psyplot_gui.compat.qtcompat.rst.txt new file mode 100644 index 0000000..b579295 --- /dev/null +++ b/_sources/api/psyplot_gui.compat.qtcompat.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.compat.qtcompat + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.compat.rst.txt b/_sources/api/psyplot_gui.compat.rst.txt new file mode 100644 index 0000000..9ae04a7 --- /dev/null +++ b/_sources/api/psyplot_gui.compat.rst.txt @@ -0,0 +1,15 @@ +psyplot\_gui.compat package +=========================== + +.. automodule:: psyplot_gui.compat + :members: + :undoc-members: + :show-inheritance: + +Submodules +---------- + +.. toctree:: + :maxdepth: 4 + + psyplot_gui.compat.qtcompat diff --git a/_sources/api/psyplot_gui.config.rcsetup.rst.txt b/_sources/api/psyplot_gui.config.rcsetup.rst.txt new file mode 100644 index 0000000..78760c2 --- /dev/null +++ b/_sources/api/psyplot_gui.config.rcsetup.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.config.rcsetup + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.config.rst.txt b/_sources/api/psyplot_gui.config.rst.txt new file mode 100644 index 0000000..4e16143 --- /dev/null +++ b/_sources/api/psyplot_gui.config.rst.txt @@ -0,0 +1,15 @@ +psyplot\_gui.config package +=========================== + +.. automodule:: psyplot_gui.config + :members: + :undoc-members: + :show-inheritance: + +Submodules +---------- + +.. toctree:: + :maxdepth: 4 + + psyplot_gui.config.rcsetup diff --git a/_sources/api/psyplot_gui.console.rst.txt b/_sources/api/psyplot_gui.console.rst.txt new file mode 100644 index 0000000..a481d15 --- /dev/null +++ b/_sources/api/psyplot_gui.console.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.console + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.content_widget.rst.txt b/_sources/api/psyplot_gui.content_widget.rst.txt new file mode 100644 index 0000000..49eb2ff --- /dev/null +++ b/_sources/api/psyplot_gui.content_widget.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.content_widget + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.dataframeeditor.rst.txt b/_sources/api/psyplot_gui.dataframeeditor.rst.txt new file mode 100644 index 0000000..c528959 --- /dev/null +++ b/_sources/api/psyplot_gui.dataframeeditor.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.dataframeeditor + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.dependencies.rst.txt b/_sources/api/psyplot_gui.dependencies.rst.txt new file mode 100644 index 0000000..322f602 --- /dev/null +++ b/_sources/api/psyplot_gui.dependencies.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.dependencies + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.fmt_widget.rst.txt b/_sources/api/psyplot_gui.fmt_widget.rst.txt new file mode 100644 index 0000000..fd89870 --- /dev/null +++ b/_sources/api/psyplot_gui.fmt_widget.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.fmt_widget + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.help_explorer.rst.txt b/_sources/api/psyplot_gui.help_explorer.rst.txt new file mode 100644 index 0000000..00791d2 --- /dev/null +++ b/_sources/api/psyplot_gui.help_explorer.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.help_explorer + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.main.rst.txt b/_sources/api/psyplot_gui.main.rst.txt new file mode 100644 index 0000000..a6a9c48 --- /dev/null +++ b/_sources/api/psyplot_gui.main.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.main + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.plot_creator.rst.txt b/_sources/api/psyplot_gui.plot_creator.rst.txt new file mode 100644 index 0000000..48bc0a3 --- /dev/null +++ b/_sources/api/psyplot_gui.plot_creator.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.plot_creator + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.preferences.rst.txt b/_sources/api/psyplot_gui.preferences.rst.txt new file mode 100644 index 0000000..87deeac --- /dev/null +++ b/_sources/api/psyplot_gui.preferences.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.preferences + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.rst.txt b/_sources/api/psyplot_gui.rst.txt new file mode 100644 index 0000000..5ea1c69 --- /dev/null +++ b/_sources/api/psyplot_gui.rst.txt @@ -0,0 +1,35 @@ +psyplot\_gui package +==================== + +.. automodule:: psyplot_gui + :members: + :undoc-members: + :show-inheritance: + +Subpackages +----------- + +.. toctree:: + :maxdepth: 4 + + psyplot_gui.compat + psyplot_gui.config + psyplot_gui.sphinx_supp + +Submodules +---------- + +.. toctree:: + :maxdepth: 4 + + psyplot_gui.backend + psyplot_gui.common + psyplot_gui.console + psyplot_gui.content_widget + psyplot_gui.dataframeeditor + psyplot_gui.dependencies + psyplot_gui.fmt_widget + psyplot_gui.help_explorer + psyplot_gui.main + psyplot_gui.plot_creator + psyplot_gui.preferences diff --git a/_sources/api/psyplot_gui.sphinx_supp.conf.rst.txt b/_sources/api/psyplot_gui.sphinx_supp.conf.rst.txt new file mode 100644 index 0000000..db4680e --- /dev/null +++ b/_sources/api/psyplot_gui.sphinx_supp.conf.rst.txt @@ -0,0 +1,4 @@ +.. automodule:: psyplot_gui.sphinx_supp.conf + :members: + :undoc-members: + :show-inheritance: diff --git a/_sources/api/psyplot_gui.sphinx_supp.rst.txt b/_sources/api/psyplot_gui.sphinx_supp.rst.txt new file mode 100644 index 0000000..17b4b59 --- /dev/null +++ b/_sources/api/psyplot_gui.sphinx_supp.rst.txt @@ -0,0 +1,15 @@ +psyplot\_gui.sphinx\_supp package +================================= + +.. automodule:: psyplot_gui.sphinx_supp + :members: + :undoc-members: + :show-inheritance: + +Submodules +---------- + +.. toctree:: + :maxdepth: 4 + + psyplot_gui.sphinx_supp.conf diff --git a/docs/changelog.rst b/_sources/changelog.rst.txt similarity index 100% rename from docs/changelog.rst rename to _sources/changelog.rst.txt diff --git a/docs/command_line.rst b/_sources/command_line.rst.txt similarity index 100% rename from docs/command_line.rst rename to _sources/command_line.rst.txt diff --git a/docs/configuration.rst b/_sources/configuration.rst.txt similarity index 100% rename from docs/configuration.rst rename to _sources/configuration.rst.txt diff --git a/docs/contributing.rst b/_sources/contributing.rst.txt similarity index 100% rename from docs/contributing.rst rename to _sources/contributing.rst.txt diff --git a/docs/getting_started.rst b/_sources/getting_started.rst.txt similarity index 100% rename from docs/getting_started.rst rename to _sources/getting_started.rst.txt diff --git a/docs/index.rst b/_sources/index.rst.txt similarity index 100% rename from docs/index.rst rename to _sources/index.rst.txt diff --git a/docs/installing.rst b/_sources/installing.rst.txt similarity index 100% rename from docs/installing.rst rename to _sources/installing.rst.txt diff --git a/docs/plugins.rst b/_sources/plugins.rst.txt similarity index 100% rename from docs/plugins.rst rename to _sources/plugins.rst.txt diff --git a/docs/todos.rst b/_sources/todos.rst.txt similarity index 100% rename from docs/todos.rst rename to _sources/todos.rst.txt diff --git a/_sphinx_design_static/design-style.1e8bd061cd6da7fc9cf755528e8ffc24.min.css b/_sphinx_design_static/design-style.1e8bd061cd6da7fc9cf755528e8ffc24.min.css new file mode 100644 index 0000000..eb19f69 --- /dev/null +++ b/_sphinx_design_static/design-style.1e8bd061cd6da7fc9cf755528e8ffc24.min.css @@ -0,0 +1 @@ +.sd-bg-primary{background-color:var(--sd-color-primary) !important}.sd-bg-text-primary{color:var(--sd-color-primary-text) !important}button.sd-bg-primary:focus,button.sd-bg-primary:hover{background-color:var(--sd-color-primary-highlight) !important}a.sd-bg-primary:focus,a.sd-bg-primary:hover{background-color:var(--sd-color-primary-highlight) !important}.sd-bg-secondary{background-color:var(--sd-color-secondary) !important}.sd-bg-text-secondary{color:var(--sd-color-secondary-text) !important}button.sd-bg-secondary:focus,button.sd-bg-secondary:hover{background-color:var(--sd-color-secondary-highlight) !important}a.sd-bg-secondary:focus,a.sd-bg-secondary:hover{background-color:var(--sd-color-secondary-highlight) !important}.sd-bg-success{background-color:var(--sd-color-success) !important}.sd-bg-text-success{color:var(--sd-color-success-text) !important}button.sd-bg-success:focus,button.sd-bg-success:hover{background-color:var(--sd-color-success-highlight) !important}a.sd-bg-success:focus,a.sd-bg-success:hover{background-color:var(--sd-color-success-highlight) !important}.sd-bg-info{background-color:var(--sd-color-info) !important}.sd-bg-text-info{color:var(--sd-color-info-text) !important}button.sd-bg-info:focus,button.sd-bg-info:hover{background-color:var(--sd-color-info-highlight) 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label.previousElementSibling.checked = true; + } + window.localStorage.setItem("sphinx-design-last-tab", syncId); +} + +document.addEventListener("DOMContentLoaded", ready, false); diff --git a/_static/_sphinx_javascript_frameworks_compat.js b/_static/_sphinx_javascript_frameworks_compat.js new file mode 100644 index 0000000..8141580 --- /dev/null +++ b/_static/_sphinx_javascript_frameworks_compat.js @@ -0,0 +1,123 @@ +/* Compatability shim for jQuery and underscores.js. + * + * Copyright Sphinx contributors + * Released under the two clause BSD licence + */ + +/** + * small helper function to urldecode strings + * + * See https://developer.mozilla.org/en-US/docs/Web/JavaScript/Reference/Global_Objects/decodeURIComponent#Decoding_query_parameters_from_a_URL + */ +jQuery.urldecode = function(x) { + if (!x) { + return x + } + return decodeURIComponent(x.replace(/\+/g, ' ')); +}; + +/** + * small helper function to urlencode strings + */ +jQuery.urlencode = encodeURIComponent; + +/** + * This function returns the parsed url parameters of the + * current request. 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+} + +div.section::after { + display: block; + content: ''; + clear: left; +} + +/* -- relbar ---------------------------------------------------------------- */ + +div.related { + width: 100%; + font-size: 90%; +} + +div.related h3 { + display: none; +} + +div.related ul { + margin: 0; + padding: 0 0 0 10px; + list-style: none; +} + +div.related li { + display: inline; +} + +div.related li.right { + float: right; + margin-right: 5px; +} + +/* -- sidebar --------------------------------------------------------------- */ + +div.sphinxsidebarwrapper { + padding: 10px 5px 0 10px; +} + +div.sphinxsidebar { + float: left; + width: 230px; + margin-left: -100%; + font-size: 90%; + word-wrap: break-word; + overflow-wrap : break-word; +} + +div.sphinxsidebar ul { + list-style: none; +} + +div.sphinxsidebar ul ul, +div.sphinxsidebar ul.want-points { + margin-left: 20px; + list-style: square; +} + +div.sphinxsidebar ul ul { + margin-top: 0; + margin-bottom: 0; +} + +div.sphinxsidebar form { + margin-top: 10px; 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window.localStorage.setItem("sphinx-design-last-tab", syncId); +} + +document.addEventListener("DOMContentLoaded", ready, false); diff --git a/_static/doctools.js b/_static/doctools.js new file mode 100644 index 0000000..d06a71d --- /dev/null +++ b/_static/doctools.js @@ -0,0 +1,156 @@ +/* + * doctools.js + * ~~~~~~~~~~~ + * + * Base JavaScript utilities for all Sphinx HTML documentation. + * + * :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS. + * :license: BSD, see LICENSE for details. + * + */ +"use strict"; + +const BLACKLISTED_KEY_CONTROL_ELEMENTS = new Set([ + "TEXTAREA", + "INPUT", + "SELECT", + "BUTTON", +]); + +const _ready = (callback) => { + if (document.readyState !== "loading") { + callback(); + } else { + document.addEventListener("DOMContentLoaded", callback); + } +}; + +/** + * Small JavaScript module for the documentation. + */ +const Documentation = { + init: () => { + Documentation.initDomainIndexTable(); + Documentation.initOnKeyListeners(); + }, + + 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// [C]VC[V] is m=1 + var mgr1 = "^(" + C + ")?" + V + C + V + C; // [C]VCVC... is m>1 + var s_v = "^(" + C + ")?" + v; // vowel in stem + + this.stemWord = function (w) { + var stem; + var suffix; + var firstch; + var origword = w; + + if (w.length < 3) + return w; + + var re; + var re2; + var re3; + var re4; + + firstch = w.substr(0,1); + if (firstch == "y") + w = firstch.toUpperCase() + w.substr(1); + + // Step 1a + re = /^(.+?)(ss|i)es$/; + re2 = /^(.+?)([^s])s$/; + + if (re.test(w)) + w = w.replace(re,"$1$2"); + else if (re2.test(w)) + w = w.replace(re2,"$1$2"); + + // Step 1b + re = /^(.+?)eed$/; + re2 = /^(.+?)(ed|ing)$/; + if (re.test(w)) { + var fp = re.exec(w); + re = new RegExp(mgr0); + if (re.test(fp[1])) { + re = /.$/; + w = w.replace(re,""); + } + } + else if (re2.test(w)) { + var fp = re2.exec(w); + stem = fp[1]; + re2 = new RegExp(s_v); + if (re2.test(stem)) { + w = stem; + re2 = /(at|bl|iz)$/; + re3 = new RegExp("([^aeiouylsz])\\1$"); + re4 = new RegExp("^" + C + v + "[^aeiouwxy]$"); + if (re2.test(w)) + w = w + "e"; + else if (re3.test(w)) { + re = /.$/; + w = w.replace(re,""); + } + else if (re4.test(w)) + w = w + "e"; + } + } + + // Step 1c + re = /^(.+?)y$/; + if (re.test(w)) { + var fp = re.exec(w); + stem = fp[1]; + re = new RegExp(s_v); + if (re.test(stem)) + w = stem + "i"; + } + + // Step 2 + re = /^(.+?)(ational|tional|enci|anci|izer|bli|alli|entli|eli|ousli|ization|ation|ator|alism|iveness|fulness|ousness|aliti|iviti|biliti|logi)$/; + if (re.test(w)) { + var fp = re.exec(w); + stem = fp[1]; + suffix = fp[2]; + re = new RegExp(mgr0); + if (re.test(stem)) + w = stem + step2list[suffix]; + } + + // Step 3 + re = /^(.+?)(icate|ative|alize|iciti|ical|ful|ness)$/; + if (re.test(w)) { + var fp = re.exec(w); + stem = fp[1]; + suffix = fp[2]; + re = new RegExp(mgr0); + if (re.test(stem)) + w = stem + step3list[suffix]; + } + + // Step 4 + re = /^(.+?)(al|ance|ence|er|ic|able|ible|ant|ement|ment|ent|ou|ism|ate|iti|ous|ive|ize)$/; + re2 = /^(.+?)(s|t)(ion)$/; + if (re.test(w)) { + var fp = re.exec(w); + stem = fp[1]; + re = new RegExp(mgr1); + if (re.test(stem)) + w = stem; + } + else if (re2.test(w)) { + var fp = re2.exec(w); + stem = fp[1] + fp[2]; + re2 = new RegExp(mgr1); + if (re2.test(stem)) + w = stem; + } + + // Step 5 + re = /^(.+?)e$/; + if (re.test(w)) { + var fp = re.exec(w); + stem = fp[1]; + re = new RegExp(mgr1); + re2 = new RegExp(meq1); + re3 = new RegExp("^" + C + v + "[^aeiouwxy]$"); + if (re.test(stem) || (re2.test(stem) && !(re3.test(stem)))) + w = stem; + } + re = /ll$/; + re2 = new RegExp(mgr1); + if (re.test(w) && re2.test(w)) { + re = /.$/; + w = w.replace(re,""); + } + + // and turn initial Y back to y + if (firstch == "y") + w = firstch.toLowerCase() + w.substr(1); + return w; + } +} + diff --git a/docs/_static/license_logo.png b/_static/license_logo.png similarity index 100% rename from docs/_static/license_logo.png rename to _static/license_logo.png diff --git a/docs/_static/license_logo.png.license b/_static/license_logo.png.license similarity index 100% rename from docs/_static/license_logo.png.license rename to _static/license_logo.png.license diff --git a/_static/minus.png b/_static/minus.png new file mode 100644 index 0000000..d96755f Binary files /dev/null and b/_static/minus.png differ diff --git a/_static/nc-table-styles.css b/_static/nc-table-styles.css new file mode 100644 index 0000000..99ae771 --- /dev/null +++ b/_static/nc-table-styles.css @@ -0,0 +1,16 @@ +.nc-attr-table { + table-layout: fixed; 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+ max-width: 100%; +} diff --git a/_static/plus.png b/_static/plus.png new file mode 100644 index 0000000..7107cec Binary files /dev/null and b/_static/plus.png differ diff --git a/_static/pygments.css b/_static/pygments.css new file mode 100644 index 0000000..84ab303 --- /dev/null +++ b/_static/pygments.css @@ -0,0 +1,75 @@ +pre { line-height: 125%; } +td.linenos .normal { color: inherit; background-color: transparent; padding-left: 5px; padding-right: 5px; } +span.linenos { color: inherit; background-color: transparent; padding-left: 5px; padding-right: 5px; } +td.linenos .special { color: #000000; background-color: #ffffc0; padding-left: 5px; padding-right: 5px; } +span.linenos.special { color: #000000; background-color: #ffffc0; padding-left: 5px; padding-right: 5px; } +.highlight .hll { background-color: #ffffcc } +.highlight { background: #f8f8f8; } +.highlight .c { color: #3D7B7B; font-style: italic } /* Comment */ +.highlight .err { border: 1px solid #FF0000 } /* Error */ +.highlight .k { color: #008000; 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+ +/** + * Simple result scoring code. + */ +if (typeof Scorer === "undefined") { + var Scorer = { + // Implement the following function to further tweak the score for each result + // The function takes a result array [docname, title, anchor, descr, score, filename] + // and returns the new score. + /* + score: result => { + const [docname, title, anchor, descr, score, filename] = result + return score + }, + */ + + // query matches the full name of an object + objNameMatch: 11, + // or matches in the last dotted part of the object name + objPartialMatch: 6, + // Additive scores depending on the priority of the object + objPrio: { + 0: 15, // used to be importantResults + 1: 5, // used to be objectResults + 2: -5, // used to be unimportantResults + }, + // Used when the priority is not in the mapping. + objPrioDefault: 0, + + // query found in title + title: 15, + partialTitle: 7, + // query found in terms + term: 5, + partialTerm: 2, + }; +} + +const _removeChildren = (element) => { + while (element && element.lastChild) element.removeChild(element.lastChild); +}; + +/** + * See https://developer.mozilla.org/en-US/docs/Web/JavaScript/Guide/Regular_Expressions#escaping + */ +const _escapeRegExp = (string) => + string.replace(/[.*+\-?^${}()|[\]\\]/g, "\\$&"); // $& means the whole matched string + +const _displayItem = (item, searchTerms, highlightTerms) => { + const docBuilder = DOCUMENTATION_OPTIONS.BUILDER; + const docFileSuffix = DOCUMENTATION_OPTIONS.FILE_SUFFIX; + const docLinkSuffix = DOCUMENTATION_OPTIONS.LINK_SUFFIX; + const showSearchSummary = DOCUMENTATION_OPTIONS.SHOW_SEARCH_SUMMARY; + const contentRoot = document.documentElement.dataset.content_root; + + const [docName, title, anchor, descr, score, _filename] = item; + + let listItem = document.createElement("li"); + let requestUrl; + let linkUrl; + if (docBuilder === "dirhtml") { + // dirhtml builder + let dirname = docName + "/"; + if (dirname.match(/\/index\/$/)) + dirname = dirname.substring(0, dirname.length - 6); + else if (dirname === "index/") dirname = ""; + requestUrl = contentRoot + dirname; + linkUrl = requestUrl; + } else { + // normal html builders + requestUrl = contentRoot + docName + docFileSuffix; + linkUrl = docName + docLinkSuffix; + } + let linkEl = listItem.appendChild(document.createElement("a")); + linkEl.href = linkUrl + anchor; + linkEl.dataset.score = score; + linkEl.innerHTML = title; + if (descr) { + listItem.appendChild(document.createElement("span")).innerHTML = + " (" + descr + ")"; + // highlight search terms in the description + if (SPHINX_HIGHLIGHT_ENABLED) // set in sphinx_highlight.js + highlightTerms.forEach((term) => _highlightText(listItem, term, "highlighted")); + } + else if (showSearchSummary) + fetch(requestUrl) + .then((responseData) => responseData.text()) + .then((data) => { + if (data) + listItem.appendChild( + Search.makeSearchSummary(data, searchTerms) + ); + // highlight search terms in the summary + if (SPHINX_HIGHLIGHT_ENABLED) // set in sphinx_highlight.js + highlightTerms.forEach((term) => _highlightText(listItem, term, "highlighted")); + }); + Search.output.appendChild(listItem); +}; +const _finishSearch = (resultCount) => { + Search.stopPulse(); + Search.title.innerText = _("Search Results"); + if (!resultCount) + Search.status.innerText = Documentation.gettext( + "Your search did not match any documents. Please make sure that all words are spelled correctly and that you've selected enough categories." + ); + else + Search.status.innerText = _( + `Search finished, found ${resultCount} page(s) matching the search query.` + ); +}; +const _displayNextItem = ( + results, + resultCount, + searchTerms, + highlightTerms, +) => { + // results left, load the summary and display it + // this is intended to be dynamic (don't sub resultsCount) + if (results.length) { + _displayItem(results.pop(), searchTerms, highlightTerms); + setTimeout( + () => _displayNextItem(results, resultCount, searchTerms, highlightTerms), + 5 + ); + } + // search finished, update title and status message + else _finishSearch(resultCount); +}; + +/** + * Default splitQuery function. Can be overridden in ``sphinx.search`` with a + * custom function per language. + * + * The regular expression works by splitting the string on consecutive characters + * that are not Unicode letters, numbers, underscores, or emoji characters. + * This is the same as ``\W+`` in Python, preserving the surrogate pair area. + */ +if (typeof splitQuery === "undefined") { + var splitQuery = (query) => query + .split(/[^\p{Letter}\p{Number}_\p{Emoji_Presentation}]+/gu) + .filter(term => term) // remove remaining empty strings +} + +/** + * Search Module + */ +const Search = { + _index: null, + _queued_query: null, + _pulse_status: -1, + + htmlToText: (htmlString) => { + const htmlElement = new DOMParser().parseFromString(htmlString, 'text/html'); + htmlElement.querySelectorAll(".headerlink").forEach((el) => { el.remove() }); + const docContent = htmlElement.querySelector('[role="main"]'); + if (docContent !== undefined) return docContent.textContent; + console.warn( + "Content block not found. Sphinx search tries to obtain it via '[role=main]'. Could you check your theme or template." + ); + return ""; + }, + + init: () => { + const query = new URLSearchParams(window.location.search).get("q"); + document + .querySelectorAll('input[name="q"]') + .forEach((el) => (el.value = query)); + if (query) Search.performSearch(query); + }, + + loadIndex: (url) => + (document.body.appendChild(document.createElement("script")).src = url), + + setIndex: (index) => { + Search._index = index; + if (Search._queued_query !== null) { + const query = Search._queued_query; + Search._queued_query = null; + Search.query(query); + } + }, + + hasIndex: () => Search._index !== null, + + deferQuery: (query) => (Search._queued_query = query), + + stopPulse: () => (Search._pulse_status = -1), + + startPulse: () => { + if (Search._pulse_status >= 0) return; + + const pulse = () => { + Search._pulse_status = (Search._pulse_status + 1) % 4; + Search.dots.innerText = ".".repeat(Search._pulse_status); + if (Search._pulse_status >= 0) window.setTimeout(pulse, 500); + }; + pulse(); + }, + + /** + * perform a search for something (or wait until index is loaded) + */ + performSearch: (query) => { + // create the required interface elements + const searchText = document.createElement("h2"); + searchText.textContent = _("Searching"); + const searchSummary = document.createElement("p"); + searchSummary.classList.add("search-summary"); + searchSummary.innerText = ""; + const searchList = document.createElement("ul"); + searchList.classList.add("search"); + + const out = document.getElementById("search-results"); + Search.title = out.appendChild(searchText); + Search.dots = Search.title.appendChild(document.createElement("span")); + Search.status = out.appendChild(searchSummary); + Search.output = out.appendChild(searchList); + + const searchProgress = document.getElementById("search-progress"); + // Some themes don't use the search progress node + if (searchProgress) { + searchProgress.innerText = _("Preparing search..."); + } + Search.startPulse(); + + // index already loaded, the browser was quick! + if (Search.hasIndex()) Search.query(query); + else Search.deferQuery(query); + }, + + /** + * execute search (requires search index to be loaded) + */ + query: (query) => { + const filenames = Search._index.filenames; + const docNames = Search._index.docnames; + const titles = Search._index.titles; + const allTitles = Search._index.alltitles; + const indexEntries = Search._index.indexentries; + + // stem the search terms and add them to the correct list + const stemmer = new Stemmer(); + const searchTerms = new Set(); + const excludedTerms = new Set(); + const highlightTerms = new Set(); + const objectTerms = new Set(splitQuery(query.toLowerCase().trim())); + splitQuery(query.trim()).forEach((queryTerm) => { + const queryTermLower = queryTerm.toLowerCase(); + + // maybe skip this "word" + // stopwords array is from language_data.js + if ( + stopwords.indexOf(queryTermLower) !== -1 || + queryTerm.match(/^\d+$/) + ) + return; + + // stem the word + let word = stemmer.stemWord(queryTermLower); + // select the correct list + if (word[0] === "-") excludedTerms.add(word.substr(1)); + else { + searchTerms.add(word); + highlightTerms.add(queryTermLower); + } + }); + + if (SPHINX_HIGHLIGHT_ENABLED) { // set in sphinx_highlight.js + localStorage.setItem("sphinx_highlight_terms", [...highlightTerms].join(" ")) + } + + // console.debug("SEARCH: searching for:"); + // console.info("required: ", [...searchTerms]); + // console.info("excluded: ", [...excludedTerms]); + + // array of [docname, title, anchor, descr, score, filename] + let results = []; + _removeChildren(document.getElementById("search-progress")); + + const queryLower = query.toLowerCase(); + for (const [title, foundTitles] of Object.entries(allTitles)) { + if (title.toLowerCase().includes(queryLower) && (queryLower.length >= title.length/2)) { + for (const [file, id] of foundTitles) { + let score = Math.round(100 * queryLower.length / title.length) + results.push([ + docNames[file], + titles[file] !== title ? `${titles[file]} > ${title}` : title, + id !== null ? "#" + id : "", + null, + score, + filenames[file], + ]); + } + } + } + + // search for explicit entries in index directives + for (const [entry, foundEntries] of Object.entries(indexEntries)) { + if (entry.includes(queryLower) && (queryLower.length >= entry.length/2)) { + for (const [file, id] of foundEntries) { + let score = Math.round(100 * queryLower.length / entry.length) + results.push([ + docNames[file], + titles[file], + id ? "#" + id : "", + null, + score, + filenames[file], + ]); + } + } + } + + // lookup as object + objectTerms.forEach((term) => + results.push(...Search.performObjectSearch(term, objectTerms)) + ); + + // lookup as search terms in fulltext + results.push(...Search.performTermsSearch(searchTerms, excludedTerms)); + + // let the scorer override scores with a custom scoring function + if (Scorer.score) results.forEach((item) => (item[4] = Scorer.score(item))); + + // now sort the results by score (in opposite order of appearance, since the + // display function below uses pop() to retrieve items) and then + // alphabetically + results.sort((a, b) => { + const leftScore = a[4]; + const rightScore = b[4]; + if (leftScore === rightScore) { + // same score: sort alphabetically + const leftTitle = a[1].toLowerCase(); + const rightTitle = b[1].toLowerCase(); + if (leftTitle === rightTitle) return 0; + return leftTitle > rightTitle ? -1 : 1; // inverted is intentional + } + return leftScore > rightScore ? 1 : -1; + }); + + // remove duplicate search results + // note the reversing of results, so that in the case of duplicates, the highest-scoring entry is kept + let seen = new Set(); + results = results.reverse().reduce((acc, result) => { + let resultStr = result.slice(0, 4).concat([result[5]]).map(v => String(v)).join(','); + if (!seen.has(resultStr)) { + acc.push(result); + seen.add(resultStr); + } + return acc; + }, []); + + results = results.reverse(); + + // for debugging + //Search.lastresults = results.slice(); // a copy + // console.info("search results:", Search.lastresults); + + // print the results + _displayNextItem(results, results.length, searchTerms, highlightTerms); + }, + + /** + * search for object names + */ + performObjectSearch: (object, objectTerms) => { + const filenames = Search._index.filenames; + const docNames = Search._index.docnames; + const objects = Search._index.objects; + const objNames = Search._index.objnames; + const titles = Search._index.titles; + + const results = []; + + const objectSearchCallback = (prefix, match) => { + const name = match[4] + const fullname = (prefix ? prefix + "." : "") + name; + const fullnameLower = fullname.toLowerCase(); + if (fullnameLower.indexOf(object) < 0) return; + + let score = 0; + const parts = fullnameLower.split("."); + + // check for different match types: exact matches of full name or + // "last name" (i.e. last dotted part) + if (fullnameLower === object || parts.slice(-1)[0] === object) + score += Scorer.objNameMatch; + else if (parts.slice(-1)[0].indexOf(object) > -1) + score += Scorer.objPartialMatch; // matches in last name + + const objName = objNames[match[1]][2]; + const title = titles[match[0]]; + + // If more than one term searched for, we require other words to be + // found in the name/title/description + const otherTerms = new Set(objectTerms); + otherTerms.delete(object); + if (otherTerms.size > 0) { + const haystack = `${prefix} ${name} ${objName} ${title}`.toLowerCase(); + if ( + [...otherTerms].some((otherTerm) => haystack.indexOf(otherTerm) < 0) + ) + return; + } + + let anchor = match[3]; + if (anchor === "") anchor = fullname; + else if (anchor === "-") anchor = objNames[match[1]][1] + "-" + fullname; + + const descr = objName + _(", in ") + title; + + // add custom score for some objects according to scorer + if (Scorer.objPrio.hasOwnProperty(match[2])) + score += Scorer.objPrio[match[2]]; + else score += Scorer.objPrioDefault; + + results.push([ + docNames[match[0]], + fullname, + "#" + anchor, + descr, + score, + filenames[match[0]], + ]); + }; + Object.keys(objects).forEach((prefix) => + objects[prefix].forEach((array) => + objectSearchCallback(prefix, array) + ) + ); + return results; + }, + + /** + * search for full-text terms in the index + */ + performTermsSearch: (searchTerms, excludedTerms) => { + // prepare search + const terms = Search._index.terms; + const titleTerms = Search._index.titleterms; + const filenames = Search._index.filenames; + const docNames = Search._index.docnames; + const titles = Search._index.titles; + + const scoreMap = new Map(); + const fileMap = new Map(); + + // perform the search on the required terms + searchTerms.forEach((word) => { + const files = []; + const arr = [ + { files: terms[word], score: Scorer.term }, + { files: titleTerms[word], score: Scorer.title }, + ]; + // add support for partial matches + if (word.length > 2) { + const escapedWord = _escapeRegExp(word); + Object.keys(terms).forEach((term) => { + if (term.match(escapedWord) && !terms[word]) + arr.push({ files: terms[term], score: Scorer.partialTerm }); + }); + Object.keys(titleTerms).forEach((term) => { + if (term.match(escapedWord) && !titleTerms[word]) + arr.push({ files: titleTerms[word], score: Scorer.partialTitle }); + }); + } + + // no match but word was a required one + if (arr.every((record) => record.files === undefined)) return; + + // found search word in contents + arr.forEach((record) => { + if (record.files === undefined) return; + + let recordFiles = record.files; + if (recordFiles.length === undefined) recordFiles = [recordFiles]; + files.push(...recordFiles); + + // set score for the word in each file + recordFiles.forEach((file) => { + if (!scoreMap.has(file)) scoreMap.set(file, {}); + scoreMap.get(file)[word] = record.score; + }); + }); + + // create the mapping + files.forEach((file) => { + if (fileMap.has(file) && fileMap.get(file).indexOf(word) === -1) + fileMap.get(file).push(word); + else fileMap.set(file, [word]); + }); + }); + + // now check if the files don't contain excluded terms + const results = []; + for (const [file, wordList] of fileMap) { + // check if all requirements are matched + + // as search terms with length < 3 are discarded + const filteredTermCount = [...searchTerms].filter( + (term) => term.length > 2 + ).length; + if ( + wordList.length !== searchTerms.size && + wordList.length !== filteredTermCount + ) + continue; + + // ensure that none of the excluded terms is in the search result + if ( + [...excludedTerms].some( + (term) => + terms[term] === file || + titleTerms[term] === file || + (terms[term] || []).includes(file) || + (titleTerms[term] || []).includes(file) + ) + ) + break; + + // select one (max) score for the file. + const score = Math.max(...wordList.map((w) => scoreMap.get(file)[w])); + // add result to the result list + results.push([ + docNames[file], + titles[file], + "", + null, + score, + filenames[file], + ]); + } + return results; + }, + + /** + * helper function to return a node containing the + * search summary for a given text. keywords is a list + * of stemmed words. + */ + makeSearchSummary: (htmlText, keywords) => { + const text = Search.htmlToText(htmlText); + if (text === "") return null; + + const textLower = text.toLowerCase(); + const actualStartPosition = [...keywords] + .map((k) => textLower.indexOf(k.toLowerCase())) + .filter((i) => i > -1) + .slice(-1)[0]; + const startWithContext = Math.max(actualStartPosition - 120, 0); + + const top = startWithContext === 0 ? "" : "..."; + const tail = startWithContext + 240 < text.length ? "..." : ""; + + let summary = document.createElement("p"); + summary.classList.add("context"); + summary.textContent = top + text.substr(startWithContext, 240).trim() + tail; + + return summary; + }, +}; + +_ready(Search.init); diff --git a/_static/sphinx_highlight.js b/_static/sphinx_highlight.js new file mode 100644 index 0000000..8a96c69 --- /dev/null +++ b/_static/sphinx_highlight.js @@ -0,0 +1,154 @@ +/* Highlighting utilities for Sphinx HTML documentation. */ +"use strict"; + +const SPHINX_HIGHLIGHT_ENABLED = true + +/** + * highlight a given string on a node by wrapping it in + * span elements with the given class name. + */ +const _highlight = (node, addItems, text, className) => { + if (node.nodeType === Node.TEXT_NODE) { + const val = node.nodeValue; + const parent = node.parentNode; + const pos = val.toLowerCase().indexOf(text); + if ( + pos >= 0 && + !parent.classList.contains(className) && + !parent.classList.contains("nohighlight") + ) { + let span; + + const closestNode = parent.closest("body, svg, foreignObject"); + const isInSVG = closestNode && closestNode.matches("svg"); + if (isInSVG) { + span = document.createElementNS("http://www.w3.org/2000/svg", "tspan"); + } else { + span = document.createElement("span"); + span.classList.add(className); + } + + span.appendChild(document.createTextNode(val.substr(pos, text.length))); + const rest = document.createTextNode(val.substr(pos + text.length)); + parent.insertBefore( + span, + parent.insertBefore( + rest, + node.nextSibling + ) + ); + node.nodeValue = val.substr(0, pos); + /* There may be more occurrences of search term in this node. So call this + * function recursively on the remaining fragment. + */ + _highlight(rest, addItems, text, className); + + if (isInSVG) { + const rect = document.createElementNS( + "http://www.w3.org/2000/svg", + "rect" + ); + const bbox = parent.getBBox(); + rect.x.baseVal.value = bbox.x; + rect.y.baseVal.value = bbox.y; + rect.width.baseVal.value = bbox.width; + rect.height.baseVal.value = bbox.height; + rect.setAttribute("class", className); + addItems.push({ parent: parent, target: rect }); + } + } + } else if (node.matches && !node.matches("button, select, textarea")) { + node.childNodes.forEach((el) => _highlight(el, addItems, text, className)); + } +}; +const _highlightText = (thisNode, text, className) => { + let addItems = []; + _highlight(thisNode, addItems, text, className); + addItems.forEach((obj) => + obj.parent.insertAdjacentElement("beforebegin", obj.target) + ); +}; + +/** + * Small JavaScript module for the documentation. + */ +const SphinxHighlight = { + + /** + * highlight the search words provided in localstorage in the text + */ + highlightSearchWords: () => { + if (!SPHINX_HIGHLIGHT_ENABLED) return; // bail if no highlight + + // get and clear terms from localstorage + const url = new URL(window.location); + const highlight = + localStorage.getItem("sphinx_highlight_terms") + || url.searchParams.get("highlight") + || ""; + localStorage.removeItem("sphinx_highlight_terms") + url.searchParams.delete("highlight"); + window.history.replaceState({}, "", url); + + // get individual terms from highlight string + const terms = highlight.toLowerCase().split(/\s+/).filter(x => x); + if (terms.length === 0) return; // nothing to do + + // There should never be more than one element matching "div.body" + const divBody = document.querySelectorAll("div.body"); + const body = divBody.length ? divBody[0] : document.querySelector("body"); + window.setTimeout(() => { + terms.forEach((term) => _highlightText(body, term, "highlighted")); + }, 10); + + const searchBox = document.getElementById("searchbox"); + if (searchBox === null) return; + searchBox.appendChild( + document + .createRange() + .createContextualFragment( + '

' + + '' + + _("Hide Search Matches") + + "

" + ) + ); + }, + + /** + * helper function to hide the search marks again + */ + hideSearchWords: () => { + document + .querySelectorAll("#searchbox .highlight-link") + .forEach((el) => el.remove()); + document + .querySelectorAll("span.highlighted") + .forEach((el) => el.classList.remove("highlighted")); + localStorage.removeItem("sphinx_highlight_terms") + }, + + initEscapeListener: () => { + // only install a listener if it is really needed + if (!DOCUMENTATION_OPTIONS.ENABLE_SEARCH_SHORTCUTS) return; + + document.addEventListener("keydown", (event) => { + // bail for input elements + if (BLACKLISTED_KEY_CONTROL_ELEMENTS.has(document.activeElement.tagName)) return; + // bail with special keys + if (event.shiftKey || event.altKey || event.ctrlKey || event.metaKey) return; + if (DOCUMENTATION_OPTIONS.ENABLE_SEARCH_SHORTCUTS && (event.key === "Escape")) { + SphinxHighlight.hideSearchWords(); + event.preventDefault(); + } + }); + }, +}; + +_ready(() => { + /* Do not call highlightSearchWords() when we are on the search page. + * It will highlight words from the *previous* search query. + */ + if (typeof Search === "undefined") SphinxHighlight.highlightSearchWords(); + SphinxHighlight.initEscapeListener(); +}); diff --git a/api.html b/api.html new file mode 100644 index 0000000..c72cf37 --- /dev/null +++ b/api.html @@ -0,0 +1,1005 @@ + + + + + + + API Reference — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

API Reference

+
+ +
+
+ + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.backend.html b/api/psyplot_gui.backend.html new file mode 100644 index 0000000..d3e54ee --- /dev/null +++ b/api/psyplot_gui.backend.html @@ -0,0 +1,504 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Matplotlib backend to include matplotlib figures as dockwidgets in the +psyplot gui

+

This backend is based upon matplotlibs qt4agg and qt5agg backends.

+

Classes:

+ + + + + + + + + + + + + + + + + + + + + +

FigureCanvas

alias of PsyplotCanvas

FigureManager

alias of PsyplotCanvasManager

FigureWidget

A simple container for figures in the psyplot backend

FiguresDock

Reimplemented QDockWidget to remove the dock widget when closed

PsyplotCanvas([figure])

The canvas class with reimplemented resizing

PsyplotCanvasManager(canvas, num)

The canvas manager for the psyplot backend interacting with the mainwindow of the psyplot gui

+

Functions:

+ + + + + + + + + +

new_figure_manager(num, *args, **kwargs)

Create a new figure manager instance

new_figure_manager_given_figure(num, figure)

Create a new figure manager instance for the given figure.

+
+
+psyplot_gui.backend.FigureCanvas
+

alias of PsyplotCanvas +Methods:

+ + + + + + +

resizeEvent(event)

Reimplemented to make sure that the figure is only resized for events with height and width greater 0

+
+ +
+
+psyplot_gui.backend.FigureManager
+

alias of PsyplotCanvasManager +Methods:

+ + + + + + + + + +

resize(width, height)

For GUI backends, resize the window (in physical pixels).

statusBar(*args, **kwargs)

+

Attributes:

+ + + + + + +

toolbar

+
+ +
+
+class psyplot_gui.backend.FigureWidget[source]
+

Bases: DockMixin, QWidget

+

A simple container for figures in the psyplot backend

+

Classes:

+ + + + + + +

dock_cls

alias of FiguresDock

+
+
+dock_cls
+

alias of FiguresDock +Methods:

+ + + + + + +

close(*args, **kwargs)

Reimplemented to remove the dock widget from the mainwindow when closed

+
+ +
+ +
+
+class psyplot_gui.backend.FiguresDock[source]
+

Bases: QDockWidget

+

Reimplemented QDockWidget to remove the dock widget when closed

+

Methods:

+ + + + + + +

close(*args, **kwargs)

Reimplemented to remove the dock widget from the mainwindow when closed

+
+
+close(*args, **kwargs)[source]
+

Reimplemented to remove the dock widget from the mainwindow when closed

+
+ +
+ +
+
+class psyplot_gui.backend.PsyplotCanvas(figure=None)[source]
+

Bases: FigureCanvasQTAgg

+

The canvas class with reimplemented resizing

+

Methods:

+ + + + + + +

resizeEvent(event)

Reimplemented to make sure that the figure is only resized for events with height and width greater 0

+
+
+resizeEvent(event)[source]
+

Reimplemented to make sure that the figure is only resized for +events with height and width greater 0

+
+ +
+ +
+
+class psyplot_gui.backend.PsyplotCanvasManager(canvas, num)[source]
+

Bases: FigureManagerQT

+

The canvas manager for the psyplot backend interacting with the +mainwindow of the psyplot gui

+

Methods:

+ + + + + + + + + +

resize(width, height)

For GUI backends, resize the window (in physical pixels).

statusBar(*args, **kwargs)

+

Attributes:

+ + + + + + +

toolbar

+
+
+resize(width, height)[source]
+

For GUI backends, resize the window (in physical pixels).

+
+ +
+
+statusBar(*args, **kwargs)[source]
+
+ +
+
+toolbar = None
+
+ +
+ +
+
+psyplot_gui.backend.new_figure_manager(num, *args, **kwargs)[source]
+

Create a new figure manager instance

+
+ +
+
+psyplot_gui.backend.new_figure_manager_given_figure(num, figure)[source]
+

Create a new figure manager instance for the given figure.

+
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.common.html b/api/psyplot_gui.common.html new file mode 100644 index 0000000..e0b3d50 --- /dev/null +++ b/api/psyplot_gui.common.html @@ -0,0 +1,763 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Common functions used for the psyplot gui

+

Classes:

+ + + + + + + + + + + + + + + + + + +

DockMixin()

A mixin class to define psyplot_gui plugins

ListValidator(valid[, sep])

A validator class to validate that a string consists of strings in a list of strings

LoadFromConsoleButton([instances])

A toolbutton to load an object from the console

PyErrorMessage

Widget designed to display python errors via the showTraceback() method

StreamToLogger(logger[, log_level])

Fake file-like stream object that redirects writes to a logger instance.

+

Functions:

+ + + + + + + + + + + + +

get_icon(name)

Get the path to an icon in the icons directory

get_module_path(modname)

Return module modname base path

is_running_tests()

Check if there are any GUI tests running

+
+
+class psyplot_gui.common.DockMixin[source]
+

Bases: object

+

A mixin class to define psyplot_gui plugins

+

Notes

+

Each external plugin should set the dock_position and the +title attribute!

+

Attributes:

+ + + + + + + + + + + + + + + + + + + + + +

config_page

The config page for this widget.

dock

The instance of QDockWidget of this plugin

dock_position

The position of the plugin

hidden

Boolean that is True if the dock widget should be hidden automatically after startup

is_shown

Boolean that is True, if the dock widget is shown

title

The title of the plugin

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + +

create_central_widget_action(main)

Setup the action to make this plugin the central widget

create_view_action(main[, docktype])

hide_plugin()

Hide the plugin widget

position_dock(main, *args, **kwargs)

Set the position of the dock widget

remove_plugin()

Remove this plugin and close it

show_plugin()

Show the plugin widget

show_status_message(msg)

Show a status message

to_dock(main[, title, position, docktype])

+

Classes:

+ + + + + + +

dock_cls

The class to use for the DockWidget

+
+
+config_page = None
+

The config page for this widget. Should inherit the +psyplot_gui.preferences.ConfigPage widget

+
+ +
+
+create_central_widget_action(main)[source]
+

Setup the action to make this plugin the central widget

+
+ +
+
+create_view_action(main, docktype='pane')[source]
+
+ +
+
+dock = None
+

The instance of QDockWidget of this plugin

+
+ +
+
+dock_cls
+

The class to use for the DockWidget

+

alias of QDockWidget +Attributes:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

AllDockWidgetFeatures

DockWidgetClosable

DockWidgetFloatable

DockWidgetMovable

DockWidgetVerticalTitleBar

NoDockWidgetFeatures

allowedAreasChanged(*args, **kwargs)

Union[Qt.DockWidgetAreas, Qt.DockWidgetArea]) [signal]

dockLocationChanged(*args, **kwargs)

Qt.DockWidgetArea) [signal]

featuresChanged(*args, **kwargs)

Union[QDockWidget.DockWidgetFeatures, QDockWidget.DockWidgetFeature]) [signal]

topLevelChanged(*args, **kwargs)

bool) [signal]

visibilityChanged(*args, **kwargs)

bool) [signal]

+

Classes:

+ + + + + + + + + +

DockWidgetFeature

DockWidgetFeatures()

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

allowedAreas(self)

changeEvent(self, event)

closeEvent(self, event)

event(self, event)

features(self)

initStyleOption(self, option)

isAreaAllowed(self, area)

isFloating(self)

paintEvent(self, event)

setAllowedAreas(self, areas)

setFeatures(self, features)

setFloating(self, floating)

setTitleBarWidget(self, widget)

setWidget(self, widget)

titleBarWidget(self)

toggleViewAction(self)

widget(self)

+
+ +
+
+dock_position = None
+

The position of the plugin

+
+ +
+
+hidden = False
+

Boolean that is True if the dock widget should be hidden automatically +after startup

+
+ +
+
+hide_plugin()[source]
+

Hide the plugin widget

+
+ +
+
+property is_shown
+

Boolean that is True, if the dock widget is shown

+
+ +
+
+position_dock(main, *args, **kwargs)[source]
+

Set the position of the dock widget

+

This method places the plugin widget at the desired dock position +(by default, indicated with the dock_position attribute)

+
+
Parameters:
+

main (psyplot_gui.main.Mainwindow) – The main window where the dock is added

+
+
+
+ +
+
+remove_plugin()[source]
+

Remove this plugin and close it

+
+ +
+
+show_plugin()[source]
+

Show the plugin widget

+
+ +
+
+show_status_message(msg)[source]
+

Show a status message

+
+ +
+
+title = None
+

The title of the plugin

+
+ +
+
+to_dock(main, title=None, position=None, docktype='pane', *args, **kwargs)[source]
+
+ +
+ +
+
+class psyplot_gui.common.ListValidator(valid, sep=',', *args, **kwargs)[source]
+

Bases: QRegExpValidator

+

A validator class to validate that a string consists of strings in a +list of strings

+
+ +
+
+class psyplot_gui.common.LoadFromConsoleButton(instances=None, *args, **kwargs)[source]
+

Bases: QToolButton

+

A toolbutton to load an object from the console

+

Methods:

+ + + + + + + + + + + + +

check(obj)

get_from_shell([oname])

Open an input dialog, receive an object and emit the object_loaded signal

get_obj(oname)

Load an object from the current shell

+

Attributes:

+ + + + + + + + + + + + +

instances2check_str

object_loaded(*args, **kwargs)

The signal that is emitted when an object has been loaded.

potential_object_names

+
+
+check(obj)[source]
+
+ +
+
+get_from_shell(oname=None)[source]
+

Open an input dialog, receive an object and emit the +object_loaded signal

+
+ +
+
+get_obj(oname)[source]
+

Load an object from the current shell

+
+ +
+
+property instances2check_str
+
+ +
+
+object_loaded(*args, **kwargs)
+

The signal that is emitted when an object has been loaded. The first +argument is the object name, the second the object itself

+
+ +
+
+property potential_object_names
+
+ +
+ +
+
+class psyplot_gui.common.PyErrorMessage[source]
+

Bases: QErrorMessage

+

Widget designed to display python errors via the showTraceback() +method

+

Methods:

+ + + + + + + + + +

excepthook(type, value, traceback)

showTraceback([header])

+
+
+excepthook(type, value, traceback)[source]
+
+ +
+
+showTraceback(header=None)[source]
+
+ +
+ +
+
+class psyplot_gui.common.StreamToLogger(logger, log_level=20)[source]
+

Bases: object

+

Fake file-like stream object that redirects writes to a logger instance.

+

Methods:

+ + + + + + + + + +

flush()

write(buf)

+
+
+flush()[source]
+
+ +
+
+write(buf)[source]
+
+ +
+ +
+
+psyplot_gui.common.get_icon(name)[source]
+

Get the path to an icon in the icons directory

+
+ +
+
+psyplot_gui.common.get_module_path(modname)[source]
+

Return module modname base path

+
+ +
+
+psyplot_gui.common.is_running_tests()[source]
+

Check if there are any GUI tests running

+

This function returns the psyplot_gui.UNIT_TESTING variable

+
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.compat.html b/api/psyplot_gui.compat.html new file mode 100644 index 0000000..c30feeb --- /dev/null +++ b/api/psyplot_gui.compat.html @@ -0,0 +1,314 @@ + + + + + + + psyplot_gui.compat package — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

psyplot_gui.compat package

+

Compatibility module for psyplot-gui

+
+

Submodules

+
+ +
+
+
+ + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.compat.qtcompat.html b/api/psyplot_gui.compat.qtcompat.html new file mode 100644 index 0000000..9039d2d --- /dev/null +++ b/api/psyplot_gui.compat.qtcompat.html @@ -0,0 +1,324 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+ +
+
+ +

Compatibility module for the different versions of PyQt

+

Functions:

+ + + + + + + + + +

asstring(s)

isstring(s)

+
+
+psyplot_gui.compat.qtcompat.asstring(s)[source]
+
+ +
+
+psyplot_gui.compat.qtcompat.isstring(s)[source]
+
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.config.html b/api/psyplot_gui.config.html new file mode 100644 index 0000000..e1620ff --- /dev/null +++ b/api/psyplot_gui.config.html @@ -0,0 +1,358 @@ + + + + + + + psyplot_gui.config package — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

psyplot_gui.config package

+

Configuration module of the psyplot package

+

This module contains the module for managing rc parameters and the logging. +Default parameters are defined in the rcsetup.defaultParams +dictionary, however you can set up your own configuration in a yaml file (see +psyplot.load_rc_from_file())

+

Data:

+ + + + + + + + + +

config_path

str or None.

logcfg_path

str.

+
+
+psyplot_gui.config.config_path = None
+

str or None. Path to the yaml configuration file (if found). +See psyplot.config.rcsetup.psyplot_fname() for further +information

+
+
Type:
+

class

+
+
+
+ +
+
+psyplot_gui.config.logcfg_path = '/builds/psyplot/psyplot-gui/psyplot_gui/config/logging.yml'
+

str. Path to the yaml logging configuration file

+
+ +
+

Submodules

+
+ +
+
+
+ + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.config.rcsetup.html b/api/psyplot_gui.config.rcsetup.html new file mode 100644 index 0000000..51e9f04 --- /dev/null +++ b/api/psyplot_gui.config.rcsetup.html @@ -0,0 +1,472 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+ +
+
+ +

Default management of the psyplot_gui package

+

This module defines the necessary configuration parts for the psyplot gui

+

Classes:

+ + + + + + +

GuiRcParams(*args, **kwargs)

RcParams for the psyplot-gui package.

+

Data:

+ + + + + + + + + +

defaultParams

dict with default values and validation functions

rcParams

RcParams instance that stores default formatoptions and configuration settings.

+

Functions:

+ + + + + + + + + + + + + + + +

try_and_error(*funcs)

Apply multiple validation functions

validate_all(v)

Test if v == 'all'

validate_none(b)

Validate that None is given

validate_str(s)

Validate a string

+
+
+class psyplot_gui.config.rcsetup.GuiRcParams(*args, **kwargs)[source]
+

Bases: RcParams

+

RcParams for the psyplot-gui package.

+

Attributes:

+ + + + + + +

HEADER

+

Methods:

+ + + + + + + + + +

load_from_file([fname])

Update rcParams from user-defined settings

load_plugins(*args, **kwargs)

Load the plugins for the psyplot_gui MainWindow

+
+
+HEADER = 'Configuration parameters of the psyplot module\n\nYou can copy this file (or parts of it) to another path and save it as\npsyplotguirc.yml. The directory should then be stored in the PSYPLOTCONFIGDIR\nenvironment variable.'
+
+ +
+
+load_from_file(fname=None)[source]
+

Update rcParams from user-defined settings

+

This function updates the instance with what is found in fname

+
+
Parameters:
+

fname (str) – Path to the yaml configuration file. Possible keys of the +dictionary are defined by config.rcsetup.defaultParams. +If None, the config.rcsetup.psyplot_fname() function is used.

+
+
+
+

See also

+

dump_to_file, psyplot_fname

+
+
+ +
+
+load_plugins(*args, **kwargs)[source]
+

Load the plugins for the psyplot_gui MainWindow

+
+
Returns:
+

A mapping from entry point name to the imported widget class

+
+
Return type:
+

dict

+
+
+

Notes

+

*args and **kwargs are ignored

+
+ +
+ +
+
+psyplot_gui.config.rcsetup.defaultParams = {'backend': ['psyplot', <function try_and_error.<locals>.validate>, 'Backend to use when using the graphical user interface. The current backend is used and no changes are made. Note that it is usually not possible to change the backend after importing the psyplot.project module. The default backend embeds the figures into the '], 'console.auto_set_mp': [True, <function validate_bool>, "If True, then the 'mp' variable in the console is automatically set when the current main project changes"], 'console.auto_set_sp': [True, <function validate_bool>, "If True, then the 'sp' variable in the console is automatically set when the current sub project changes"], 'console.connect_to_help': [True, <function validate_bool>, 'Whether the console shall be connected to the help_explorer or not'], 'console.start_channels': [True, <function validate_bool>, 'Start the different channels of the KernelClient'], 'content.load_tooltips': [True, <function validate_bool>, 'If True, a lazy load is performed on the arrays and data sets and their string representation is displayed as tool tip. This part of the data into memory. It is recommended to set this to False for remote data.'], 'fmt.sort_by_key': [True, <function validate_bool>, 'If True, the formatoptions in the Formatoptions widget are sorted by their formatoption key rather than by their name.'], 'help_explorer.online': [None, <function validate_bool_maybe_none>, 'Switch that controls whether the online functions of the help explorer shall be enabled. False implies that help_explorer.use_intersphinx is set to False'], 'help_explorer.render_docs_parallel': [True, <function validate_bool>, 'Boolean whether the html docs are rendered in a separate process'], 'help_explorer.use_intersphinx': [None, <function validate_bool_maybe_none>, 'Use the intersphinx extension and link to the online documentations of matplotlib, pyplot, psyplot, numpy, etc. when converting rst docstrings. The inventories are loaded when the first object is documented. If None, intersphinx is only used when `help_explorer.online` is True and you are not using windows'], 'help_explorer.use_webengineview': [True, <function validate_bool>, 'Enable the PyQt5.QtWebEngineWidgets.QWebEngineView which might not work under certain circumstances.'], 'main.listen_to_port': [True, <function validate_bool>, 'If True and the psyplot gui is already running, new files are opened in that gui'], 'main.open_files_port': [30124, <function _make_type_validator.<locals>.validate_int>, 'The port number used when new files are opened'], 'main.opengl': ['software', <function validate_str>, "The opengl implementation to use. Should be one of 'software', 'desktop', 'gles' or 'automatic'."], 'plugins.exclude': [[], <function try_and_error.<locals>.validate>, "The plugins to exclude from loading. Can be either 'all' to exclude all plugins or a list like in 'plugins.include'."], 'plugins.include': [None, <function try_and_error.<locals>.validate>, "The plugins to load. Can be either None to load all that are not explicitly excluded by the 'plugins.exclude' key or a list of plugins to include. List items can be either module names, plugin names or the module name and widget via '<module_name>:<widget>'"]}
+

dict with default values and validation functions

+
+ +
+
+psyplot_gui.config.rcsetup.rcParams = {'backend': 'psyplot', 'console.auto_set_mp': True, 'console.auto_set_sp': True, 'console.connect_to_help': True, 'console.start_channels': True, 'content.load_tooltips': True, 'fmt.sort_by_key': True, 'help_explorer.online': None, 'help_explorer.render_docs_parallel': True, 'help_explorer.use_intersphinx': None, 'help_explorer.use_webengineview': True, 'main.listen_to_port': True, 'main.open_files_port': 30124, 'main.opengl': 'software', 'plugins.exclude': [], 'plugins.include': None}
+

RcParams instance that stores default +formatoptions and configuration settings.

+
+ +
+
+psyplot_gui.config.rcsetup.try_and_error(*funcs)[source]
+

Apply multiple validation functions

+
+
Parameters:
+

*funcs – Validation functions to test

+
+
Return type:
+

function

+
+
+
+ +
+
+psyplot_gui.config.rcsetup.validate_all(v)[source]
+

Test if v == 'all'

+
+ +
+
+psyplot_gui.config.rcsetup.validate_none(b)[source]
+

Validate that None is given

+
+
Parameters:
+

b ({None, 'none'}) – None or string (the case is ignored)

+
+
Return type:
+

None

+
+
Raises:
+

ValueError –

+
+
+
+ +
+
+psyplot_gui.config.rcsetup.validate_str(s)[source]
+

Validate a string

+
+
Parameters:
+

s (str) –

+
+
Return type:
+

str

+
+
Raises:
+

ValueError –

+
+
+
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.console.html b/api/psyplot_gui.console.html new file mode 100644 index 0000000..1c4658a --- /dev/null +++ b/api/psyplot_gui.console.html @@ -0,0 +1,547 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

An example of opening up an RichJupyterWidget in a PyQT Application, this can +execute either stand-alone or by importing this file and calling +inprocess_qtconsole.show(). +Based on the earlier example in the IPython repository, this has +been updated to use qtconsole.

+

Classes:

+ + + + + + + + + +

ConsoleWidget(**kwargs)

A console widget to access an inprocess shell

IPythonControl

A modified control to show the help of objects in the help explorer

+

Functions:

+ + + + + + +

init_asyncio_patch()

set default asyncio policy to be compatible with tornado Tornado 6 (at least) is not compatible with the default asyncio implementation on Windows Pick the older SelectorEventLoopPolicy on Windows if the known-incompatible default policy is in use. do this as early as possible to make it a low priority and overrideable ref: https://github.com/tornadoweb/tornado/issues/2608 FIXME: if/when tornado supports the defaults in asyncio, remove and bump tornado requirement for py38.

+
+
+class psyplot_gui.console.ConsoleWidget(**kwargs: Any)[source]
+

Bases: QtInProcessRichJupyterWidget, DockMixin

+

A console widget to access an inprocess shell

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

close(self)

eventFilter(*args, **kwargs)

Reimplemented to ensure a console-like behavior in the underlying text widgets.

get_current_object([to_end])

Get the name of the object at cursor position

get_obj(obj_text)

Get the object from the shell specified by obj_text

run_command_in_shell(code, *args, **kwargs)

Run a script in the shell

run_script_in_shell(script)

Run a script in the shell

show_current_help([to_end, force])

Show the help of the object at the cursor position if rcParams['console.connect_to_help'] is set

update_mp(project)

Update the mp variable in the shell is rcParams['console.auto_set_mp'] with a main project

update_sp(project)

Update the sp variable in the shell is rcParams['console.auto_set_sp'] with a sub project

+

Classes:

+ + + + + + +

custom_control

alias of IPythonControl

+

Attributes:

+ + + + + + + + + + + + + + + + + + + + + +

dock_position

The position of the plugin

intro_msg

rc

run_command(*args, **kwargs)

run_script(*args, **kwargs)

title

The title of the plugin

+
+
+close(self) → bool[source]
+
+ +
+
+custom_control
+

alias of IPythonControl +Methods:

+ + + + + + +

keyPressEvent(event)

Reimplement Qt Method - Basic keypress event handler

+
+ +
+
+dock_position = 2
+

The position of the plugin

+
+ +
+
+eventFilter(*args, **kwargs)[source]
+

Reimplemented to ensure a console-like behavior in the underlying +text widgets.

+
+ +
+
+get_current_object(to_end=False)[source]
+

Get the name of the object at cursor position

+
+ +
+
+get_obj(obj_text)[source]
+

Get the object from the shell specified by obj_text

+
+
Parameters:
+

obj_text (str) – The name of the variable as it is stored in the shell

+
+
Returns:
+

    +

  • bool – True, if the object could be found

    • +

  • object or None – The requested object or None if it could not be found

    • +
+

+
+
+
+ +
+
+intro_msg = ''
+
+ +
+
+rc = {'auto_set_mp': True, 'auto_set_sp': True, 'connect_to_help': True, 'start_channels': True}
+
+ +
+
+run_command(*args, **kwargs)
+
+ +
+
+run_command_in_shell(code, *args, **kwargs)[source]
+

Run a script in the shell

+
+ +
+
+run_script(*args, **kwargs)
+
+ +
+
+run_script_in_shell(script)[source]
+

Run a script in the shell

+
+ +
+
+show_current_help(to_end=False, force=False)[source]
+

Show the help of the object at the cursor position if +rcParams['console.connect_to_help'] is set

+
+ +
+
+title = 'Console'
+

The title of the plugin

+
+ +
+
+update_mp(project)[source]
+

Update the mp variable in the shell is +rcParams['console.auto_set_mp'] with a main project

+
+ +
+
+update_sp(project)[source]
+

Update the sp variable in the shell is +rcParams['console.auto_set_sp'] with a sub project

+
+ +
+ +
+
+class psyplot_gui.console.IPythonControl[source]
+

Bases: QTextEdit

+

A modified control to show the help of objects in the help explorer

+

Methods:

+ + + + + + +

keyPressEvent(event)

Reimplement Qt Method - Basic keypress event handler

+
+
+keyPressEvent(event)[source]
+

Reimplement Qt Method - Basic keypress event handler

+
+ +
+ +
+
+psyplot_gui.console.init_asyncio_patch()[source]
+

set default asyncio policy to be compatible with tornado +Tornado 6 (at least) is not compatible with the default +asyncio implementation on Windows +Pick the older SelectorEventLoopPolicy on Windows +if the known-incompatible default policy is in use. +do this as early as possible to make it a low priority and overrideable +ref: https://github.com/tornadoweb/tornado/issues/2608 +FIXME: if/when tornado supports the defaults in asyncio,

+
+

remove and bump tornado requirement for py38

+
+
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.content_widget.html b/api/psyplot_gui.content_widget.html new file mode 100644 index 0000000..7ef2a5c --- /dev/null +++ b/api/psyplot_gui.content_widget.html @@ -0,0 +1,879 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Module containing the project content widget to display the selection

+

This module redefines the psyplot.project.Project class with +additional features for an interactive usage with graphical qt user interface. +There is no need to import this module because the +GuiProject class defined here replaces the project class in the +psyplot.project module.

+

Classes:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

ArrayItem(ref, *args, **kwargs)

A listwidget item that takes it's informations from a given array

DatasetTree(*args, **kwargs)

A QTreeWidget showing informations on all datasets in the main project

DatasetTreeItem(ds[, columns])

A QTreeWidgetItem showing informations on one dataset in the main project

FiguresTree(*args, **kwargs)

A tree widget sorting the arrays by their figure

FiguresTreeItem(ref, *args, **kwargs)

An item displaying the information on a data object in one figure

PlotterList([plotter_type])

QListWidget showing multiple ArrayItems of one Plotter class

ProjectContent(*args, **kwargs)

Display the content in the current project

ProjectContentWidget(*args, **kwargs)

A combination of selection buttons and the ProjectContent

SelectAllButton(*args, **kwargs)

A button to select all data objects in the current main project

SelectNoneButton(*args, **kwargs)

A button to select no data objects in the current main project

+

Functions:

+ + + + + + +

escape_html(s)

+
+
+class psyplot_gui.content_widget.ArrayItem(ref, *args, **kwargs)[source]
+

Bases: QListWidgetItem

+

A listwidget item that takes it’s informations from a given array

+

Attributes:

+ + + + + + +

arr

The psyplot.data.InteractiveList or psyplot.data.InteractiveArray instance

+

Methods:

+ + + + + + + + + +

disconnect_from_array()

set_text_from_array()

Set the text and tooltop from the psyplot.data.InteractiveArray._short_info() and __str__ methods

+
+
+arr = None
+

The psyplot.data.InteractiveList or +psyplot.data.InteractiveArray instance

+
+ +
+
+disconnect_from_array()[source]
+
+ +
+
+set_text_from_array()[source]
+

Set the text and tooltop from the +psyplot.data.InteractiveArray._short_info() and __str__ methods

+
+ +
+ +
+
+class psyplot_gui.content_widget.DatasetTree(*args, **kwargs)[source]
+

Bases: QTreeWidget, DockMixin

+

A QTreeWidget showing informations on all datasets in the main project

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

add_datasets_from_cp([project])

Clear the tree and add the datasets based upon the given project

create_dataset_tree()

Set up the columns and insert the DatasetTreeItem instances from the current project

expand_items(expanded_items)

Expand tree items

expanded_items()

Create a mapping from dataset numbers to variables that are expanded.

is_coord(item)

is_variable(item)

load_variable_desc(item)

make_plot(ds, name[, exec_])

open_menu(pos)

refresh_items([item])

set_columns([columns])

Set up the columns in the DatasetTree.

+

Attributes:

+ + + + + + +

tooltips

+
+
+add_datasets_from_cp(project=None)[source]
+

Clear the tree and add the datasets based upon the given project

+
+
Parameters:
+

project (psyplot.project.Project) – The project containing the data array. If the project is not a main +project, it’s main project is used.

+
+
+
+ +
+
+create_dataset_tree()[source]
+

Set up the columns and insert the DatasetTreeItem +instances from the current project

+
+ +
+
+expand_items(expanded_items)[source]
+

Expand tree items

+
+
Parameters:
+

expanded_items (dict) – A mapping as returned by the expanded_items() method

+
+
+
+ +
+
+expanded_items()[source]
+

Create a mapping from dataset numbers to variables that are expanded.

+
+ +
+
+static is_coord(item)[source]
+
+ +
+
+static is_variable(item)[source]
+
+ +
+
+load_variable_desc(item)[source]
+
+ +
+
+make_plot(ds, name, exec_=None)[source]
+
+ +
+
+open_menu(pos)[source]
+
+ +
+
+refresh_items(item=None)[source]
+
+ +
+
+set_columns(columns=['Value'])[source]
+

Set up the columns in the DatasetTree.

+
+
Parameters:
+

columns (list of str) – A list of netCDF attributes that shall be shown in columns

+
+
+
+ +
+
+tooltips = {'Add to project': 'Add this variable or a plot of it to the current project', 'Refresh': 'Refresh the selected dataset', 'Refresh all': 'Refresh all datasets'}
+
+ +
+ +
+
+class psyplot_gui.content_widget.DatasetTreeItem(ds, columns=[], *args, **kwargs)[source]
+

Bases: QTreeWidgetItem

+

A QTreeWidgetItem showing informations on one dataset in the main +project

+

Methods:

+ + + + + + + + + + + + + + + +

add_attrs([attrs, item])

add_variables([ds])

Add children of variables and coords to this TreeWidgetItem

get_plots_item(item)

refresh_plots_item(item, vname[, mp, sp])

+
+
+add_attrs(attrs=None, item=None)[source]
+
+ +
+
+add_variables(ds=None)[source]
+

Add children of variables and coords to this TreeWidgetItem

+
+ +
+
+get_plots_item(item)[source]
+
+ +
+
+refresh_plots_item(item, vname, mp=None, sp=None)[source]
+
+ +
+ +
+
+class psyplot_gui.content_widget.FiguresTree(*args, **kwargs)[source]
+

Bases: QTreeWidget, DockMixin

+

A tree widget sorting the arrays by their figure

+

This widget uses the current sub and main project to show the open figures

+

Methods:

+ + + + + + +

add_figures_from_cp(project)

Add the items in this tree based upon the figures in the given project

+
+
+add_figures_from_cp(project)[source]
+

Add the items in this tree based upon the figures in the given +project

+
+ +
+ +
+
+class psyplot_gui.content_widget.FiguresTreeItem(ref, *args, **kwargs)[source]
+

Bases: QTreeWidgetItem

+

An item displaying the information on a data object in one figure

+

Methods:

+ + + + + + + + + +

disconnect_from_array()

Disconect this item from the corresponding array

set_text_from_array()

Set the text and tooltop from the psyplot.data.InteractiveArray._short_info() and __str__ methods

+
+
+disconnect_from_array()[source]
+

Disconect this item from the corresponding array

+
+ +
+
+set_text_from_array()[source]
+

Set the text and tooltop from the +psyplot.data.InteractiveArray._short_info() and __str__ methods

+
+ +
+ +
+
+class psyplot_gui.content_widget.PlotterList(plotter_type=None, *args, **kwargs)[source]
+

Bases: QListWidget

+

QListWidget showing multiple ArrayItems of one Plotter class

+

Attributes:

+ + + + + + + + + + + + + + + + + + + + + +

array_items

Iterable of ArrayItem items in this list

arrays

List of The InteractiveBase instances in this list

can_import_plotter

is_empty

boolean.

project_attribute

str.

updated_from_project(*args, **kwargs)

+

Methods:

+ + + + + + + + + + + + +

disconnect_items()

Disconnect the items in this list from the arrays

update_cp(*args, **kwargs)

Update the current project from what is selected in this list

update_from_project(project)

Update the content from the given Project

+
+
+property array_items
+

Iterable of ArrayItem items in this list

+
+ +
+
+property arrays
+

List of The InteractiveBase instances in this list

+
+ +
+
+can_import_plotter = True
+
+ +
+
+disconnect_items()[source]
+

Disconnect the items in this list from the arrays

+
+ +
+
+is_empty = True
+

boolean. True if the current project does not contain any arrays in the +attribute identified by the project_attribute

+
+ +
+
+project_attribute = None
+

str. The name of the attribute of the psyplot.project.Project +class

+
+ +
+
+update_cp(*args, **kwargs)[source]
+

Update the current project from what is selected in this list

+
+ +
+
+update_from_project(project)[source]
+

Update the content from the given Project

+
+
Parameters:
+

project (psyplot.project.Project) – If the project is a main project, new items will be added. +Otherwise only the current selection changes

+
+
+
+ +
+
+updated_from_project(*args, **kwargs)
+
+ +
+ +
+
+class psyplot_gui.content_widget.ProjectContent(*args, **kwargs)[source]
+

Bases: QToolBox

+

Display the content in the current project

+

This toolbox contains several PlotterList that show the content +of the current main and subproject

+

Methods:

+ + + + + + + + + + + + + + + +

add_plotterlist(identifier[, force])

Create a PlotterList from an identifier from the psyplot.project.Project class

enable_list(list_widget)

Enable a given list widget based upon whether it is empty or not

update_current_list()

Update the current list from the current main and sub project

update_lists(p)

+

Attributes:

+ + + + + + + + + +

current_names

lists

dict containing the PlotterList instances of the different selection attributes

+
+
+add_plotterlist(identifier, force=False)[source]
+

Create a PlotterList from an identifier from the +psyplot.project.Project class

+
+ +
+
+property current_names
+
+ +
+
+enable_list(list_widget)[source]
+

Enable a given list widget based upon whether it is empty or not

+
+ +
+
+lists = {}
+

dict containing the PlotterList instances +of the different selection attributes

+
+ +
+
+update_current_list()[source]
+

Update the current list from the current main and sub project

+
+ +
+
+update_lists(p)[source]
+
+ +
+ +
+
+class psyplot_gui.content_widget.ProjectContentWidget(*args, **kwargs)[source]
+

Bases: QWidget, DockMixin

+

A combination of selection buttons and the ProjectContent

+
+ +
+
+class psyplot_gui.content_widget.SelectAllButton(*args, **kwargs)[source]
+

Bases: QPushButton

+

A button to select all data objects in the current main project

+

Methods:

+ + + + + + + + + +

enable_from_project(project)

Enable the button if the given project is not empty

select_all()

Select all arrays

+
+
+enable_from_project(project)[source]
+

Enable the button if the given project is not empty

+
+ +
+
+select_all()[source]
+

Select all arrays

+
+ +
+ +
+
+class psyplot_gui.content_widget.SelectNoneButton(*args, **kwargs)[source]
+

Bases: QPushButton

+

A button to select no data objects in the current main project

+

Methods:

+ + + + + + + + + +

enable_from_project(project)

Enable the button if the given project is not empty

select_none()

Clear current subproject

+
+
+enable_from_project(project)[source]
+

Enable the button if the given project is not empty

+
+ +
+
+select_none()[source]
+

Clear current subproject

+
+ +
+ +
+
+psyplot_gui.content_widget.escape_html(s)[source]
+
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.dataframeeditor.html b/api/psyplot_gui.dataframeeditor.html new file mode 100644 index 0000000..c6fbbdb --- /dev/null +++ b/api/psyplot_gui.dataframeeditor.html @@ -0,0 +1,976 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

A widget to display and edit DataFrames

+

Classes:

+ + + + + + + + + + + + + + + + + + +

DataFrameDock

The QDockWidget for the DataFrameEditor

DataFrameEditor(*args, **kwargs)

An editor for data frames

DataFrameModel(df[, parent, index_editable, ...])

DataFrame Table Model

DataFrameView(df, parent, *args, **kwargs)

Data Frame view class

FrozenTableView(parent)

This class implements a table with its first column frozen For more information please see: http://doc.qt.io/qt-5/qtwidgets-itemviews-frozencolumn-example.html

+

Functions:

+ + + + + + +

bool_false_check(value)

Used to convert bool intrance to false since any string in bool('') will return True

+
+
+class psyplot_gui.dataframeeditor.DataFrameDock[source]
+

Bases: QDockWidget

+

The QDockWidget for the DataFrameEditor

+

Methods:

+ + + + + + +

close()

Reimplemented to remove the dock widget from the mainwindow when closed

+
+
+close()[source]
+

Reimplemented to remove the dock widget from the mainwindow when closed

+
+ +
+ +
+
+class psyplot_gui.dataframeeditor.DataFrameEditor(*args, **kwargs)[source]
+

Bases: DockMixin, QWidget

+

An editor for data frames

+

Attributes:

+ + + + + + + + + + + + + + + +

cell_edited(*args, **kwargs)

A signal that is emitted when a cell has been changed.

cleared(*args, **kwargs)

A signal that is emitted, if the table is cleared

hidden

bool(x) -> bool

rows_inserted(*args, **kwargs)

A signal that is emitted, if rows have been inserted into the dataframe.

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

clear_table()

Clear the table and emit the cleared signal

close(self)

maybe_tabify()

open_dataframe([fname])

Opens a file dialog and the dataset that has been inserted

set_df(df, *args, **kwargs)

Fill the table from a DataFrame

set_dtypes_changeable(state)

Set the DataFrameModel.dtypes_changeable attribute

set_index_editable(state)

Set the DataFrameModel.index_editable attribute

set_lbl_size_text([nrows, ncols])

Set the text of the lbl_size label to display the size

to_dock(main, *args, **kwargs)

toggle_fmt_button(text)

update_format()

Update the format of the table

update_index_editable()

+

Classes:

+ + + + + + +

dock_cls

alias of DataFrameDock

+
+
+cell_edited(*args, **kwargs)
+

A signal that is emitted when a cell has been changed. The argument +is a tuple of two integers and one float: +the row index, the column index and the new value

+
+ +
+
+clear_table()[source]
+

Clear the table and emit the cleared signal

+
+ +
+
+cleared(*args, **kwargs)
+

A signal that is emitted, if the table is cleared

+
+ +
+
+close(self) → bool[source]
+
+ +
+
+dock_cls
+

alias of DataFrameDock +Methods:

+ + + + + + +

close()

Reimplemented to remove the dock widget from the mainwindow when closed

+
+ +
+
+property hidden
+

bool(x) -> bool

+

Returns True when the argument x is true, False otherwise. +The builtins True and False are the only two instances of the class bool. +The class bool is a subclass of the class int, and cannot be subclassed.

+
+ +
+
+maybe_tabify()[source]
+
+ +
+
+open_dataframe(fname=None, *args, **kwargs)[source]
+

Opens a file dialog and the dataset that has been inserted

+
+ +
+
+rows_inserted(*args, **kwargs)
+

A signal that is emitted, if rows have been inserted into the dataframe. +The first value is the integer of the (original) position of the row, +the second one is the number of rows

+
+ +
+
+set_df(df, *args, **kwargs)[source]
+

Fill the table from a DataFrame

+
+
Parameters:
+
    +

  • df (pandas.DataFrame) – The data frame that will be shown by this DataFrameModel +instance

    • +

  • index_editable (bool) – True if the index should be modifiable by the user

    • +

  • dtypes_changeable (bool) – True, if the data types should be modifiable by the user

    • +

  • show (bool) – If True (default), show and raise_ the editor

    • +
+
+
+
+ +
+
+set_dtypes_changeable(state)[source]
+

Set the DataFrameModel.dtypes_changeable attribute

+
+ +
+
+set_index_editable(state)[source]
+

Set the DataFrameModel.index_editable attribute

+
+ +
+
+set_lbl_size_text(nrows=None, ncols=None)[source]
+

Set the text of the lbl_size label to display the size

+
+ +
+
+to_dock(main, *args, **kwargs)[source]
+
+ +
+
+toggle_fmt_button(text)[source]
+
+ +
+
+update_format()[source]
+

Update the format of the table

+
+ +
+
+update_index_editable()[source]
+
+ +
+ +
+
+class psyplot_gui.dataframeeditor.DataFrameModel(df, parent=None, index_editable=True, dtypes_changeable=True)[source]
+

Bases: QAbstractTableModel

+

DataFrame Table Model

+

Attributes:

+ + + + + + + + + +

COLS_TO_LOAD

ROWS_TO_LOAD

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

bgcolor(state)

Toggle backgroundcolor

can_fetch_more([rows, columns])

columnCount([index])

DataFrame column number

data(index[, role])

Cell content

fetch_more([rows, columns])

flags(index)

Set flags

get_format()

Return current format

get_value(row, column)

Returns the value of the DataFrame

headerData(section, orientation[, role])

Set header data

insertRow(irow)

Insert one row into the df

insertRows(irow[, nrows])

Insert a row into the df

reset()

rowCount([index])

DataFrame row number

setData(index, value[, role, change_type])

Cell content change

set_format(format)

Change display format

sort(column[, order, return_check, report])

Overriding sort method

update_df_index()

"Update the DataFrame index

+
+
+COLS_TO_LOAD = 40
+
+ +
+
+ROWS_TO_LOAD = 500
+
+ +
+
+bgcolor(state)[source]
+

Toggle backgroundcolor

+
+ +
+
+can_fetch_more(rows=False, columns=False)[source]
+
+ +
+
+columnCount(index=<PyQt5.QtCore.QModelIndex object>)[source]
+

DataFrame column number

+
+ +
+
+data(index, role=0)[source]
+

Cell content

+
+ +
+
+fetch_more(rows=False, columns=False)[source]
+
+ +
+
+flags(index)[source]
+

Set flags

+
+ +
+
+get_format()[source]
+

Return current format

+
+ +
+
+get_value(row, column)[source]
+

Returns the value of the DataFrame

+
+ +
+
+headerData(section, orientation, role=0)[source]
+

Set header data

+
+ +
+
+insertRow(irow)[source]
+

Insert one row into the df

+
+
Parameters:
+

irow (int) – The row index. If iRow is equal to the length of the +df, the new row will be appended.

+
+
+
+ +
+
+insertRows(irow, nrows=1)[source]
+

Insert a row into the df

+
+
Parameters:
+
    +

  • irow (int) – The row index. If irow is equal to the length of the +df, the rows will be appended.

    • +

  • nrows (int) – The number of rows to insert

    • +
+
+
+
+ +
+
+reset()[source]
+
+ +
+
+rowCount(index=<PyQt5.QtCore.QModelIndex object>)[source]
+

DataFrame row number

+
+ +
+
+setData(index, value, role=2, change_type=None)[source]
+

Cell content change

+
+ +
+
+set_format(format)[source]
+

Change display format

+
+ +
+
+sort(column, order=0, return_check=False, report=True)[source]
+

Overriding sort method

+
+ +
+
+update_df_index()[source]
+

“Update the DataFrame index

+
+ +
+ +
+
+class psyplot_gui.dataframeeditor.DataFrameView(df, parent, *args, **kwargs)[source]
+

Bases: QTableView

+

Data Frame view class

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

change_type(func)

A function that changes types of cells

contextMenuEvent(event)

Reimplement Qt method

copy()

Copy text to clipboard

insert_row_above_selection()

Insert rows above the selection

insert_row_below_selection()

Insert rows below the selection

load_more_data(value[, rows, columns])

moveCursor(cursor_action, modifiers)

Update the table position.

reset_model()

resizeEvent(event)

Update the frozen column dimensions.

scrollTo(index, hint)

Scroll the table.

set_df(df, *args, **kwargs)

Set the DataFrame for this table

set_index([append])

Set the index from the selected columns

setup_menu()

Setup context menu

sortByColumn(index)

Implement a Column sort

update_section_height(logical_index, ...)

Update the vertical width of the frozen column when a change takes place on any of the rows

update_section_width(logical_index, ...)

Update the horizontal width of the frozen column when a change takes place in the first column of the table

+

Attributes:

+ + + + + + +

filled

True if the table is filled with content

+
+
+change_type(func)[source]
+

A function that changes types of cells

+
+ +
+
+contextMenuEvent(event)[source]
+

Reimplement Qt method

+
+ +
+
+copy()[source]
+

Copy text to clipboard

+
+ +
+
+property filled
+

True if the table is filled with content

+
+ +
+
+insert_row_above_selection()[source]
+

Insert rows above the selection

+

The number of rows inserted depends on the number of selected rows

+
+ +
+
+insert_row_below_selection()[source]
+

Insert rows below the selection

+

The number of rows inserted depends on the number of selected rows

+
+ +
+
+load_more_data(value, rows=False, columns=False)[source]
+
+ +
+
+moveCursor(cursor_action, modifiers)[source]
+

Update the table position.

+

Updates the position along with the frozen column +when the cursor (selector) changes its position

+
+ +
+
+reset_model()[source]
+
+ +
+
+resizeEvent(event)[source]
+

Update the frozen column dimensions.

+

Updates takes place when the enclosing window of this +table reports a dimension change

+
+ +
+
+scrollTo(index, hint)[source]
+

Scroll the table.

+

It is necessary to ensure that the item at index is visible. +The view will try to position the item according to the +given hint. This method does not takes effect only if +the frozen column is scrolled.

+
+ +
+
+set_df(df, *args, **kwargs)[source]
+

Set the DataFrame for this table

+
+
Parameters:
+
    +

  • df (pandas.DataFrame) – The data frame that will be shown by this DataFrameModel +instance

    • +

  • index_editable (bool) – True if the index should be modifiable by the user

    • +

  • dtypes_changeable (bool) – True, if the data types should be modifiable by the user

    • +
+
+
+
+ +
+
+set_index(append=False)[source]
+

Set the index from the selected columns

+
+ +
+
+setup_menu()[source]
+

Setup context menu

+
+ +
+
+sortByColumn(index)[source]
+

Implement a Column sort

+
+ +
+
+update_section_height(logical_index, old_size, new_size)[source]
+

Update the vertical width of the frozen column when a +change takes place on any of the rows

+
+ +
+
+update_section_width(logical_index, old_size, new_size)[source]
+

Update the horizontal width of the frozen column when a +change takes place in the first column of the table

+
+ +
+ +
+
+class psyplot_gui.dataframeeditor.FrozenTableView(parent)[source]
+

Bases: QTableView

+

This class implements a table with its first column frozen +For more information please see: +http://doc.qt.io/qt-5/qtwidgets-itemviews-frozencolumn-example.html

+

Methods:

+ + + + + + + + + +

contextMenuEvent(event)

Show the context Menu

update_geometry()

Update the frozen column size when an update occurs in its parent table

+
+
+contextMenuEvent(event)[source]
+

Show the context Menu

+

Reimplemented to show the use the contextMenuEvent of the parent

+
+ +
+
+update_geometry()[source]
+

Update the frozen column size when an update occurs in its parent +table

+
+ +
+ +
+
+psyplot_gui.dataframeeditor.bool_false_check(value)[source]
+

Used to convert bool intrance to false since any string in bool(‘’) +will return True

+
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.dependencies.html b/api/psyplot_gui.dependencies.html new file mode 100644 index 0000000..163e5cc --- /dev/null +++ b/api/psyplot_gui.dependencies.html @@ -0,0 +1,451 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Dependencies widget of the psyplot package

+

This module defines the DependenciesWidget that shows the versions of +of psyplot, psyplot_gui, psyplot plugins and their requirements

+

Classes:

+ + + + + + + + + +

DependenciesDialog(versions, *args, **kwargs)

A dialog for displaying the dependencies

DependenciesTree(versions, *args, **kwargs)

A tree widget to display dependencies

+
+
+class psyplot_gui.dependencies.DependenciesDialog(versions, *args, **kwargs)[source]
+

Bases: QDialog

+

A dialog for displaying the dependencies

+

Attributes:

+ + + + + + + + + + + + + + + + + + + + + +

bt_copy

The QPushButton used for copying selected packages to the clipboard

info_label

A label for simple status update

label

description label

timer

A QTimer that clears the info_label after some time

tree

The DependenciesTree that contains the package infos

vbox

the QVBoxLayout containing all the widgets

+

Methods:

+ + + + + + + + + +

clear_label()

Clear the info label

copy_selected([label])

Copy the selected versions and items to the clipboard

+
+
+bt_copy = None
+

The QPushButton used for copying selected packages to the clipboard

+
+ +
+
+clear_label()[source]
+

Clear the info label

+
+ +
+
+copy_selected(label=None)[source]
+

Copy the selected versions and items to the clipboard

+
+ +
+
+info_label = None
+

A label for simple status update

+
+ +
+
+label = None
+

description label

+
+ +
+
+timer = None
+

A QTimer that clears the info_label after some time

+
+ +
+
+tree = None
+

The DependenciesTree that contains the package infos

+
+ +
+
+vbox = None
+

the QVBoxLayout containing all the widgets

+
+ +
+ +
+
+class psyplot_gui.dependencies.DependenciesTree(versions, *args, **kwargs)[source]
+

Bases: QTreeWidget

+

A tree widget to display dependencies

+

This widget uses a dictionary as created through the +psyplot.get_versions() function to display the requirements and +versions.

+

Methods:

+ + + + + + + + + +

add_dependencies(versions[, parent])

Add the version informations to the tree

open_menu(position)

Open a menu to expand and collapse all items in the tree

+
+
+add_dependencies(versions, parent=None)[source]
+

Add the version informations to the tree

+

This method creates an QTreeWidgetItem for each package in versions +and adds it to this tree.

+
+
Parameters:
+

parent (QTreeWidgetItem) – The parent of the newly created items for the packages in +versions. If None, the newly created items are inserted as +top level items into the tree

+
+
+
+ +
+
+open_menu(position)[source]
+

Open a menu to expand and collapse all items in the tree

+
+
Parameters:
+

position (QPosition) – The position where to open the menu

+
+
+
+ +
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.fmt_widget.html b/api/psyplot_gui.fmt_widget.html new file mode 100644 index 0000000..d4813a4 --- /dev/null +++ b/api/psyplot_gui.fmt_widget.html @@ -0,0 +1,685 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Module defining a widget for updating the formatoption of the current +project

+

Classes:

+ + + + + + + + + +

DimensionsWidget(parent[, dim])

A widget for updating the dimensions

FormatoptionWidget(*args, **kwargs)

Widget to update the formatoptions of the current project

+
+
+class psyplot_gui.fmt_widget.DimensionsWidget(parent, dim=None)[source]
+

Bases: QWidget

+

A widget for updating the dimensions

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + +

get_ds()

insert_from_combo()

reset_combobox()

Clear all comboboxes

set_dim(dim)

set_single_selection([yes])

slice2list(sl)

toggle_close_popup()

+
+
+get_ds()[source]
+
+ +
+
+insert_from_combo()[source]
+
+ +
+
+reset_combobox()[source]
+

Clear all comboboxes

+
+ +
+
+set_dim(dim)[source]
+
+ +
+
+set_single_selection(yes=True)[source]
+
+ +
+
+slice2list(sl)[source]
+
+ +
+
+toggle_close_popup()[source]
+
+ +
+ +
+
+class psyplot_gui.fmt_widget.FormatoptionWidget(*args, **kwargs)[source]
+

Bases: QWidget, DockMixin

+

Widget to update the formatoptions of the current project

+

This widget, mainly made out of a combobox for the formatoption group, +a combobox for the formatoption, and a text editor, is designed +for updating the selected formatoptions for the current subproject.

+

The widget is connected to the psyplot.project.Project.oncpchange +signal and refills the comboboxes if the current subproject changes.

+

The text editor either accepts python code that will be executed by the +given console, or yaml code.

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

clear_text()

fill_combos_from_project(project)

Fill group_combo and fmt_combo from a project

fill_fmt_combo(i[, current_text])

Fill the fmt_combo combobox based on the current group name

get_name(fmto)

Get the name of a psyplot.plotter.Formatoption instance

get_obj()

Get the current update text

get_text()

Get the current update text

insert_obj(obj)

Add a string to the formatoption widget

load_fmt_widget(i)

Load the formatoption specific widget

refill_from_rc(sort_by_key)

remove_fmt_widget()

reset_fmt_widget()

run_code()

Run the update of the project inside the shell

set_current_fmt_value(i)

Add the value of the current formatoption to the line text

set_fmto(name)

set_obj(obj)

setup_fmt_completion_model()

show_all_fmt_info(what)

Show the keys, summaries or docs of the formatoptions

show_fmt_info(i)

Show the documentation of the formatoption in the help explorer

toggle_line_edit()

Switch between the line_edit and text_edit

+

Attributes:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

fmt_combo

The combobox for the formatoptions

fmt_widget

The formatoption specific widget that is loaded from the formatoption

fmto

group_combo

The combobox for the formatoption groups

help_explorer

The help_explorer to display the documentation of the formatoptions

line_edit

A line edit for updating the formatoptions

multiline_button

A button to switch between line_edit and text_edit

no_fmtos_update

update the fmto combo box or not

shell

The shell to execute the update of the formatoptions in the current project

text_edit

A multiline text editor for updating the formatoptions

+
+
+clear_text()[source]
+
+ +
+
+fill_combos_from_project(project)[source]
+

Fill group_combo and fmt_combo from a project

+
+
Parameters:
+

project (psyplot.project.Project) – The project to use

+
+
+
+ +
+
+fill_fmt_combo(i, current_text=None)[source]
+

Fill the fmt_combo combobox based on the current group name

+
+ +
+
+fmt_combo = None
+

The combobox for the formatoptions

+
+ +
+
+fmt_widget = None
+

The formatoption specific widget that is loaded from the formatoption

+
+ +
+
+property fmto
+
+ +
+
+get_name(fmto)[source]
+

Get the name of a psyplot.plotter.Formatoption instance

+
+ +
+
+get_obj()[source]
+

Get the current update text

+
+ +
+
+get_text()[source]
+

Get the current update text

+
+ +
+
+group_combo = None
+

The combobox for the formatoption groups

+
+ +
+
+help_explorer = None
+

The help_explorer to display the documentation of the formatoptions

+
+ +
+
+insert_obj(obj)[source]
+

Add a string to the formatoption widget

+
+ +
+
+line_edit = None
+

A line edit for updating the formatoptions

+
+ +
+
+load_fmt_widget(i)[source]
+

Load the formatoption specific widget

+

This method loads the formatoption specific widget from the +psyplot.plotter.Formatoption.get_fmt_widget() method and +displays it above the line_edit

+
+
Parameters:
+

i (int) – The index of the current formatoption

+
+
+
+ +
+
+multiline_button = None
+

A button to switch between line_edit and text_edit

+
+ +
+
+property no_fmtos_update
+

update the fmto combo box or not

+
+ +
+
+refill_from_rc(sort_by_key)[source]
+
+ +
+
+remove_fmt_widget()[source]
+
+ +
+
+reset_fmt_widget()[source]
+
+ +
+
+run_code()[source]
+

Run the update of the project inside the shell

+
+ +
+
+set_current_fmt_value(i)[source]
+

Add the value of the current formatoption to the line text

+
+ +
+
+set_fmto(name)[source]
+
+ +
+
+set_obj(obj)[source]
+
+ +
+
+setup_fmt_completion_model()[source]
+
+ +
+
+property shell
+

The shell to execute the update of the formatoptions in the current +project

+
+ +
+
+show_all_fmt_info(what)[source]
+

Show the keys, summaries or docs of the formatoptions

+

Calling this function let’s the help browser show the documentation +etc. of all docs or only the selected group determined by the state of +the grouped_cb and all_groups_cb checkboxes

+
+
Parameters:
+

what ({'keys', 'summaries', 'docs'}) – Determines what to show

+
+
+
+ +
+
+show_fmt_info(i)[source]
+

Show the documentation of the formatoption in the help explorer

+
+ +
+
+text_edit = None
+

A multiline text editor for updating the formatoptions

+
+ +
+
+toggle_line_edit()[source]
+

Switch between the line_edit and text_edit

+

This method is called when the multiline_button is clicked +and switches between the single line :attr:``line_edit` and the +multiline text_edit

+
+ +
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.help_explorer.html b/api/psyplot_gui.help_explorer.html new file mode 100644 index 0000000..b63cedb --- /dev/null +++ b/api/psyplot_gui.help_explorer.html @@ -0,0 +1,1312 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Help explorer widget supplying a simple web browser and a plain text help +viewer

+

Classes:

+ + + + + + + + + + + + + + + + + + + + + + + + +

HelpExplorer(*args, **kwargs)

A widget for showing the documentation.

HelpMixin()

Base class for providing help on an object

SphinxThread(outdir[, html_text_no_doc])

A thread to render sphinx documentation in a separate process

TextHelp(*args, **kwargs)

Class to show plain text rst docstrings

UrlBrowser(*args, **kwargs)

Very simple browser with session history and autocompletion based upon the PyQt5.QtWebEngineWidgets.QWebEngineView class

UrlCombo(*args, **kwargs)

A editable ComboBox with autocompletion

UrlHelp(*args, **kwargs)

Class to convert rst docstrings to html and show browsers

+

Functions:

+ + + + + + + + + +

file2html(fname)

html2file(url)

+
+
+class psyplot_gui.help_explorer.HelpExplorer(*args, **kwargs)[source]
+

Bases: QWidget, DockMixin

+

A widget for showing the documentation. It behaves somewhat similar +to spyders object inspector plugin and can show restructured text either +as html (if sphinx is installed) or as plain text. It furthermore has a +browser to show html content

+
+

Warning

+

The HelpBrowser class is known to crash under PyQt4 when new web +page domains are loaded. Hence you should disable the browsing to different +remote websites and even disable intersphinx

+
+

Methods:

+ + + + + + + + + + + + + + + + + + +

close(self)

set_viewer(name)

Sets the current documentation viewer

show_help(obj[, oname, files])

Show the documentaion of the given object

show_intro([text])

Show an intro text

show_rst(text[, oname, files])

Show restructured text

+

Attributes:

+ + + + + + +

viewers

The viewer classes used by the help explorer.

+
+
+close(self) → bool[source]
+
+ +
+
+set_viewer(name)[source]
+

Sets the current documentation viewer

+
+
Parameters:
+

name (str or object) – A string must be one of the viewers attribute. An object +can be one of the values in the viewers attribute

+
+
+
+ +
+
+show_help(obj, oname='', files=None)[source]
+

Show the documentaion of the given object

+

We first try to use the current viewer based upon it’s +HelpMixin.can_document_object attribute. If this does not work, +we check the other viewers

+
+
Parameters:
+
    +

  • obj (object) – The object to get the documentation for

    • +

  • oname (str) – The name to use for the object in the documentation

    • +

  • files (list of str) – A path to additional files that shall be used to process the +docs

    • +
+
+
+
+ +
+
+show_intro(text='')[source]
+

Show an intro text

+

We first try to use the current viewer based upon it’s +HelpMixin.can_show_rst attribute. If this does not work, +we check the other viewers

+
+
Parameters:
+

s (str) – A string in reStructured Text format to show

+
+
+
+ +
+
+show_rst(text, oname='', files=None)[source]
+

Show restructured text

+

We first try to use the current viewer based upon it’s +HelpMixin.can_show_rst attribute. If this does not work, +we check the other viewers

+
+
Parameters:
+
    +

  • text (str) – The text to show

    • +

  • oname (str) – The object name

    • +

  • descriptor (instance of object_descriptor) – The object descriptor holding the informations

    • +

  • files (list of str) – A path to additional files that shall be used to display the docs

    • +
+
+
+
+ +
+
+viewers = {'HTML help': <class 'psyplot_gui.help_explorer.UrlHelp'>, 'Plain text': <class 'psyplot_gui.help_explorer.TextHelp'>}
+

The viewer classes used by the help explorer. HelpExplorer +instances replace this attribute with the corresponding HelpMixin +instance

+
+ +
+ +
+
+class psyplot_gui.help_explorer.HelpMixin[source]
+

Bases: object

+

Base class for providing help on an object

+

Attributes:

+ + + + + + + + + +

can_document_object

bool determining whether the documentation of an object can be shown or not

can_show_rst

bool determining whether this class can show restructured text

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + +

describe_object(obj[, oname])

Return an instance of the object_descriptor class

get_doc(descriptor)

Get the documentation of the object in the given descriptor

header(descriptor, sig)

Format the header and include object name and signature sig

process_docstring(lines, descriptor)

Make final modification on the rst lines

show_help(obj[, oname, files])

Show the rst documentation for the given object

show_intro([text])

Show an intro message

show_rst(text[, oname, descriptor, files])

Abstract method which needs to be implemented by th widget to show restructured text

+

Classes:

+ + + + + + +

object_descriptor

Object containing the necessary fields to describe an object given to the help widget.

+
+
+can_document_object = True
+

bool determining whether the documentation of an object can be +shown or not

+
+ +
+
+can_show_rst = True
+

bool determining whether this class can show restructured text

+
+ +
+
+describe_object(obj, oname='')[source]
+

Return an instance of the object_descriptor class

+
+
Returns:
+

The descriptor containing the information on the object

+
+
Return type:
+

object_descriptor

+
+
+
+ +
+
+get_doc(descriptor)[source]
+

Get the documentation of the object in the given descriptor

+
+
Parameters:
+

descriptor (instance of object_descriptor) – The descriptor containig the information on the specific object

+
+
Returns:
+

The header and documentation of the object in the descriptor

+
+
Return type:
+

str

+
+
+

Notes

+

This method uses the IPython.core.oinspect.getdoc() function to +get the documentation and the IPython.core.oinspect.signature() +function to get the signature. Those function (different from the +inspect module) do not fail when the object is not saved

+
+ +
+
+header(descriptor, sig)[source]
+

Format the header and include object name and signature sig

+
+
Returns:
+

The header for the documentation

+
+
Return type:
+

str

+
+
+
+ +
+
+object_descriptor
+

Object containing the necessary fields to describe an object given to +the help widget. The descriptor is set up by the describe_object() +method.

+

alias of ObjectDescriptor +Attributes:

+ + + + + + + + + +

name

Alias for field number 1

obj

Alias for field number 0

+
+ +
+
+process_docstring(lines, descriptor)[source]
+

Make final modification on the rst lines

+
+
Returns:
+

The docstring

+
+
Return type:
+

str

+
+
+
+ +
+
+show_help(obj, oname='', files=None)[source]
+

Show the rst documentation for the given object

+
+
Parameters:
+
    +

  • obj (object) – The object to get the documentation for

    • +

  • oname (str) – The name to use for the object in the documentation

    • +

  • files (list of str) – A path to additional files that shall be used to process the +docs

    • +
+
+
+
+ +
+
+show_intro(text='')[source]
+

Show an intro message

+
+
Parameters:
+

s (str) – A string in reStructured Text format to show

+
+
+
+ +
+
+show_rst(text, oname='', descriptor=None, files=None)[source]
+

Abstract method which needs to be implemented by th widget to show +restructured text

+
+
Parameters:
+
    +

  • text (str) – The text to show

    • +

  • oname (str) – The object name

    • +

  • descriptor (instance of object_descriptor) – The object descriptor holding the informations

    • +

  • files (list of str) – A path to additional files that shall be used to display the docs

    • +
+
+
Returns:
+

True if the text is displayed

+
+
Return type:
+

bool

+
+
+
+ +
+ +
+
+class psyplot_gui.help_explorer.SphinxThread(outdir, html_text_no_doc='')[source]
+

Bases: QThread

+

A thread to render sphinx documentation in a separate process

+

Attributes:

+ + + + + + + + + +

html_error(*args, **kwargs)

html_ready(*args, **kwargs)

A signal to be emitted when the rendering finished.

+

Methods:

+ + + + + + + + + +

render(doc, name)

Render the given rst string and save the file as name + '.rst'

run()

Create the html file.

+
+
+html_error(*args, **kwargs)
+
+ +
+
+html_ready(*args, **kwargs)
+

A signal to be emitted when the rendering finished. The url is the +file location

+
+ +
+
+render(doc, name)[source]
+

Render the given rst string and save the file as name + '.rst'

+
+
Parameters:
+
    +

  • doc (str) – The rst docstring

    • +

  • name (str) – the name to use for the file

    • +
+
+
+
+ +
+
+run()[source]
+

Create the html file. When called the first time, it may take a +while because the sphinx.application.Sphinx app is build, +potentially with intersphinx

+

When finished, the html_ready signal is emitted

+
+ +
+ +
+
+class psyplot_gui.help_explorer.TextHelp(*args, **kwargs)[source]
+

Bases: QFrame, HelpMixin

+

Class to show plain text rst docstrings

+

Attributes:

+ + + + + + +

editor

The PyQt5.QtWidgets.QPlainTextEdit instance used for displaying the documentation

+

Methods:

+ + + + + + +

show_rst(text, *args, **kwargs)

Show the given text in the editor window

+
+
+editor
+

The PyQt5.QtWidgets.QPlainTextEdit instance used for +displaying the documentation

+
+ +
+
+show_rst(text, *args, **kwargs)[source]
+

Show the given text in the editor window

+
+
Parameters:
+
    +

  • text (str) – The text to show

    • +

  • ``*args –

    Are ignored

    +

    • +

  • **kwargs`` –

    Are ignored

    +

    • +
+
+
+
+ +
+ +
+
+class psyplot_gui.help_explorer.UrlBrowser(*args, **kwargs)[source]
+

Bases: QFrame

+

Very simple browser with session history and autocompletion based upon +the PyQt5.QtWebEngineWidgets.QWebEngineView class

+
+

Warning

+

This class is known to crash under PyQt4 when new web page domains are +loaded. Hence it should be handled with care

+
+

Methods:

+ + + + + + + + + + + + + + + + + + +

browse(url)

Make a web browse on the given url and show the page on the Webview widget.

toogle_lock()

Disable (or enable) the changing of the current webpage

toogle_url_lock()

Disable (or enable) the loading of web pages in www

update_url_lock_from_rc(online)

url_changed(url)

Triggered when the url is changed to update the adress line

+

Attributes:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

bt_ahead

button to go to next url

bt_back

button to go to previous url

bt_lock

button to go lock to the current url

bt_lock_default

default value for bt_lock.

bt_refresh

refresh the current url

bt_url_lock

button to disable browsing in www

bt_url_lock_default

default value for bt_url_lock.

button_box

The upper part of the browser containing all the buttons

completed

Boolean whether the html page loading is completed.

default_url

The initial url showed in the webview.

doc_urls

html

The actual widget showing the html content

tb_url

adress line

url_like_re

vbox

The upper most layout aranging the button box and the html widget

+
+
+browse(url)[source]
+

Make a web browse on the given url and show the page on the Webview +widget.

+
+ +
+
+bt_ahead = None
+

button to go to next url

+
+ +
+
+bt_back = None
+

button to go to previous url

+
+ +
+
+bt_lock = None
+

button to go lock to the current url

+
+ +
+
+bt_lock_default = None
+

default value for bt_lock. Is set during browser +initialization

+
+ +
+
+bt_refresh = None
+

refresh the current url

+
+ +
+
+bt_url_lock = None
+

button to disable browsing in www

+
+ +
+
+bt_url_lock_default = None
+

default value for bt_url_lock. Is set during browser +initialization

+
+ +
+
+button_box = None
+

The upper part of the browser containing all the buttons

+
+ +
+
+property completed
+

Boolean whether the html page loading is completed.

+
+ +
+
+default_url = None
+

The initial url showed in the webview. If None, nothing will be +displayed

+
+ +
+
+doc_urls = {'cartopy': 'http://scitools.org.uk/cartopy/docs/latest/index.html', 'numpy': 'https://docs.scipy.org/doc/numpy/reference/routines.html', 'pandas': 'http://pandas.pydata.org/pandas-docs/stable/', 'psyplot': 'http://psyplot.github.io/psyplot/', 'pyplot': 'http://matplotlib.org/api/pyplot_api.html', 'seaborn': 'http://stanford.edu/~mwaskom/software/seaborn/api.html', 'startpage': 'https://startpage.com/', 'xarray': 'http://xarray.pydata.org/en/stable/'}
+
+ +
+
+html
+

The actual widget showing the html content

+
+ +
+
+tb_url = None
+

adress line

+
+ +
+
+toogle_lock()[source]
+

Disable (or enable) the changing of the current webpage

+
+ +
+
+toogle_url_lock()[source]
+

Disable (or enable) the loading of web pages in www

+
+ +
+
+update_url_lock_from_rc(online)[source]
+
+ +
+
+url_changed(url)[source]
+

Triggered when the url is changed to update the adress line

+
+ +
+
+url_like_re = re.compile('^\\w+://')
+
+ +
+
+vbox = None
+

The upper most layout aranging the button box and the html widget

+
+ +
+ +
+
+class psyplot_gui.help_explorer.UrlCombo(*args, **kwargs)[source]
+

Bases: QComboBox

+

A editable ComboBox with autocompletion

+

Methods:

+ + + + + + + + + + + + +

add_text_on_top([text, block])

Add the given text as the first item

keyPressEvent(event)

Handle key press events

setModel(model)

Reimplemented to also set the model of the filter and completer

+
+
+add_text_on_top(text=None, block=False)[source]
+

Add the given text as the first item

+
+ +
+
+keyPressEvent(event)[source]
+

Handle key press events

+
+ +
+
+setModel(model)[source]
+

Reimplemented to also set the model of the filter and completer

+
+ +
+ +
+
+class psyplot_gui.help_explorer.UrlHelp(*args, **kwargs)[source]
+

Bases: UrlBrowser, HelpMixin

+

Class to convert rst docstrings to html and show browsers

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

browse(url)

Reimplemented to add file paths to the url string

close(self)

describe_object(obj[, oname])

Describe an object using additionaly the object type from the get_objtype() method

get_doc(descriptor)

Reimplemented to (potentially) use the features from sphinx.ext.autodoc

get_objtype(obj)

Get the object type of the given object and determine wheter the object is considered a class, a module, a function, method or data

header(descriptor, sig)

Format the header and include object name and signature sig

is_importable(modname)

Determine whether members of the given module can be documented with sphinx by using the sphinx.util.get_module_source() function

process_docstring(lines, descriptor)

Process the lines with the napoleon sphinx extension

reset_sphinx(value)

Method that is called if the configuration changes

show_help(obj[, oname, files])

Render the rst docu for the given object with sphinx and show it

show_intro([text])

Show the intro text in the explorer

show_rst(text[, oname, descriptor, files])

Render restructured text with sphinx and show it

toogle_connect_console()

Disable (or enable) the loading of web pages in www

toogle_url_lock()

Disable (or enable) the loading of web pages in www

update_connect_console(connect)

url_changed(url)

Reimplemented to remove file paths from the url string

+

Attributes:

+ + + + + + + + + + + + + + + +

bt_url_menus

menu button with different urls

can_document_object

bool determining whether the documentation of an object can be shown or not

can_show_rst

bool determining whether this class can show restructured text

sphinx_thread

+

Classes:

+ + + + + + +

object_descriptor

Object containing the necessary fields to describe an object given to the help widget.

+
+
+browse(url)[source]
+

Reimplemented to add file paths to the url string

+
+ +
+
+bt_url_menus = None
+

menu button with different urls

+
+ +
+
+can_document_object = True
+

bool determining whether the documentation of an object can be +shown or not

+
+ +
+
+can_show_rst = True
+

bool determining whether this class can show restructured text

+
+ +
+
+close(self) → bool[source]
+
+ +
+
+describe_object(obj, oname='')[source]
+

Describe an object using additionaly the object type from the +get_objtype() method

+
+
Returns:
+

The descriptor of the object

+
+
Return type:
+

instance of object_descriptor

+
+
+
+ +
+
+get_doc(descriptor)[source]
+

Reimplemented to (potentially) use the features from +sphinx.ext.autodoc

+
+ +
+
+get_objtype(obj)[source]
+

Get the object type of the given object and determine wheter the +object is considered a class, a module, a function, method or data

+
+
Parameters:
+

obj (object) –

+
+
Returns:
+

One out of {‘class’, ‘module’, ‘function’, ‘method’, ‘data’}

+
+
Return type:
+

str

+
+
+
+ +
+
+header(descriptor, sig)[source]
+

Format the header and include object name and signature sig

+
+
Returns:
+

The header for the documentation

+
+
Return type:
+

str

+
+
+
+ +
+
+is_importable(modname)[source]
+

Determine whether members of the given module can be documented with +sphinx by using the sphinx.util.get_module_source() function

+
+
Parameters:
+

modname (str) – The __name__ attribute of the module to import

+
+
Returns:
+

True if sphinx can import the module

+
+
Return type:
+

bool

+
+
+
+ +
+
+object_descriptor
+

Object containing the necessary fields to describe an object given to +the help widget. The descriptor is set up by the describe_object() +method and contains an additional objtype attribute

+

alias of ObjectDescriptor +Attributes:

+ + + + + + + + + + + + +

name

Alias for field number 1

obj

Alias for field number 0

objtype

Alias for field number 2

+
+ +
+
+process_docstring(lines, descriptor)[source]
+

Process the lines with the napoleon sphinx extension

+
+ +
+
+reset_sphinx(value)[source]
+

Method that is called if the configuration changes

+
+ +
+
+show_help(obj, oname='', files=None)[source]
+

Render the rst docu for the given object with sphinx and show it

+
+
Parameters:
+
    +

  • obj (object) – The object to get the documentation for

    • +

  • oname (str) – The name to use for the object in the documentation

    • +

  • files (list of str) – A path to additional files that shall be used to process the +docs

    • +
+
+
+
+ +
+
+show_intro(text='')[source]
+

Show the intro text in the explorer

+
+
Parameters:
+

s (str) – A string in reStructured Text format to show

+
+
+
+ +
+
+show_rst(text, oname='', descriptor=None, files=None)[source]
+

Render restructured text with sphinx and show it

+
+
Parameters:
+

%(HelpMixin.show_rst.parameters)s –

+
+
+
+ +
+
+sphinx_thread = None
+
+ +
+
+toogle_connect_console()[source]
+

Disable (or enable) the loading of web pages in www

+
+ +
+
+toogle_url_lock()[source]
+

Disable (or enable) the loading of web pages in www

+
+ +
+
+update_connect_console(connect)[source]
+
+ +
+
+url_changed(url)[source]
+

Reimplemented to remove file paths from the url string

+
+ +
+ +
+
+psyplot_gui.help_explorer.file2html(fname)[source]
+
+ +
+
+psyplot_gui.help_explorer.html2file(url)[source]
+
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.html b/api/psyplot_gui.html new file mode 100644 index 0000000..ea85d2c --- /dev/null +++ b/api/psyplot_gui.html @@ -0,0 +1,1171 @@ + + + + + + + psyplot_gui package — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

psyplot_gui package

+

psyplot-gui

+

Graphical user interface for the psyplot package

+

Classes:

+ + + + + + +

ListGuiPluginsAction(option_strings[, dest, ...])

+

Data:

+ + + + + + +

UNIT_TESTING

A boolean variable to check if the GUI is tested.

+

Functions:

+ + + + + + + + + + + + + + + +

get_parser([create])

Return a parser to make that can be used to make plots or open files from the command line

get_versions([requirements])

send_files_to_psyplot(callback, fnames, ...)

Simple socket client used to send the args passed to the psyplot executable to an already running instance.

start_app([fnames, name, dims, plot_method, ...])

Eventually start the QApplication or only make a plot

+
+
+class psyplot_gui.ListGuiPluginsAction(option_strings, dest='==SUPPRESS==', nargs=None, default='==SUPPRESS==', **kwargs)[source]
+

Bases: Action

+
+ +
+
+psyplot_gui.UNIT_TESTING = 'true'
+

A boolean variable to check if the GUI is tested. This is set automatically +true on CI services

+
+ +
+
+psyplot_gui.get_parser(create=True)[source]
+

Return a parser to make that can be used to make plots or open files +from the command line

+
+
Returns:
+

The argparse.ArgumentParser instance

+
+
Return type:
+

psyplot.parser.FuncArgParser

+
+
+
+

See also

+

psyplot.main.get_parser, psyplot.parser.FuncArgParser, psyplot.main.main

+
+
+ +
+
+psyplot_gui.get_versions(requirements=True)[source]
+
+ +
+
+psyplot_gui.send_files_to_psyplot(callback, fnames, project, *args)[source]
+

Simple socket client used to send the args passed to the psyplot +executable to an already running instance.

+

This function has to most parts been taken from spyder

+
+ +
+
+psyplot_gui.start_app(fnames=[], name=[], dims=None, plot_method=None, output=None, project=None, engine=None, formatoptions=None, tight=False, encoding=None, enable_post=False, seaborn_style=None, output_project=None, concat_dim=None, chname={}, backend=False, new_instance=False, rc_file=None, rc_gui_file=None, include_plugins=None, exclude_plugins=[], offline=False, pwd=None, script=None, command=None, exec_=True, use_all=False, callback=None, preset=None, opengl_implementation=None, webengineview=True, decoder=None)[source]
+

Eventually start the QApplication or only make a plot

+
+
Parameters:
+
    +

  • fnames (list of str) – Either the filenames to show, or, if the project parameter is set, +the a list of ,-separated filenames to make a mapping from the +original filename to a new one

    • +

  • name (list of str) – The variable names to plot if the output parameter is set

    • +

  • dims (dict) – A mapping from coordinate names to integers if the project is not +given

    • +

  • plot_method (str) – The name of the plot_method to use

    • +

  • output (str or list of str) – If set, the data is loaded and the figures are saved to the specified +filename and now graphical user interface is shown

    • +

  • project (str) – If set, the project located at the given file name is loaded

    • +

  • engine (str) – The engine to use for opening the dataset (see +psyplot.data.open_dataset())

    • +

  • formatoptions (dict) – A dictionary of formatoption that is applied to the data visualized by +the chosen plot_method

    • +

  • tight (bool) – If True/set, it is tried to figure out the tight bbox of the figure and +adjust the paper size of the output to it

    • +

  • rc_file (str) – The path to a yaml configuration file that can be used to update the +rcParams

    • +

  • encoding (str) – The encoding to use for loading the project. If None, it is +automatically determined by pickle. Note: Set this to 'latin1' +if using a project created with python2 on python3.

    • +

  • enable_post (bool) – Enable the post processing +formatoption. If True/set, post processing scripts are enabled in the +given project. Only set this if you are sure that you can trust the +given project file because it may be a security vulnerability.

    • +

  • seaborn_style (str) – The name of the style of the seaborn package that can be used for +the seaborn.set_style() function

    • +

  • output_project (str) – The name of a project file to save the project to

    • +

  • concat_dim (str) – The concatenation dimension if multiple files in fnames are +provided

    • +

  • chname (dict) – A mapping from variable names in the project to variable names in the +datasets that should be used instead

    • +

  • preset (str) – The filename or identifier of a preset. If the given preset is +the path to an existing yaml file, it will be loaded. Otherwise we +look up the preset in the psyplot configuration directory (see +get_configdir()).

    • +

  • decoder (str) – Keyword arguments for the decoder.

    • +

  • backend (None or str) – The backend to use. By default, the 'gui.backend' key in the +rcParams dictionary is used. +Otherwise it can be None to use the standard matplotlib backend or a +string identifying the backend

    • +

  • new_instance (bool) – If True/set and the output parameter is not set, a new application is +created

    • +

  • rc_gui_file (str) – The path to a yaml configuration file that can be used to update the +rcParams

    • +

  • include_plugins (list of str) – The plugin widget to include. Can be either None to load all that are +not explicitly excluded by exclude_plugins or a list of +plugins to include. List items can be either module names, plugin +names or the module name and widget via '<module_name>:<widget>'

    • +

  • exclude_plugins (list of str) – The plugin widgets to exclude. Can be either 'all' to exclude +all plugins or a list like in include_plugins.

    • +

  • offline (bool) – If True/set, psyplot will be started in offline mode without +intersphinx and remote access for the help explorer

    • +

  • pwd (str) – The path to the working directory to use. Note if you do not provide +any fnames or project, but set the pwd, it will switch the +pwd of the current GUI.

    • +

  • script (str) – The path to a python script that shall be run in the GUI. If the GUI +is already running, the commands will be executed in this GUI.

    • +

  • command (str) – Python commands that shall be run in the GUI. If the GUI is already +running, the commands will be executed in this GUI

    • +

  • use_all (bool) – If True, use all variables. Note that this is the default if the +output is specified and not name

    • +

  • exec (bool) – If True, the main loop is entered.

    • +

  • callback (str) – A unique identifier for the method that should be used if psyplot is +already running. Set this parameter to None to avoid sending

    • +

  • opengl_implementation ({'software', 'desktop', 'gles', 'automatic'}) – OpenGL implementation to pass to Qt. Possible options are +‘software’, ‘desktop’, ‘gles’ and ‘automatic’ (which let’s PyQt +decide).

    • +

  • webengineview (bool) – If True (default), use an HTML help widget. This might not be available +for all builds of PyQt5 under all circumstances. If not set, the +rcParams key 'help_explorer.use_webengineview' is used.

    • +
+
+
Returns:
+

None if exec_ is True, otherwise the created +MainWindow instance

+
+
Return type:
+

None or psyplot_gui.main.MainWindow

+
+
+
+ +
+

Subpackages

+
+ +
+
+
+

Submodules

+
+ +
+
+
+ + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.main.html b/api/psyplot_gui.main.html new file mode 100644 index 0000000..135a4ed --- /dev/null +++ b/api/psyplot_gui.main.html @@ -0,0 +1,910 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Core module for the psyplot graphical user interface

+

This module redefines the psyplot.project.Project class with +additional features for an interactive usage with graphical qt user interface. +There is no need to import this module because the +GuiProject class defined here replaces the project class in the +psyplot.project module.

+

Classes:

+ + + + + + +

MainWindow([show])

+

Data:

+ + + + + + +

mainwindow

The PyQt5.QtWidgets.QMainWindow of the graphical user interface

+
+
+class psyplot_gui.main.MainWindow(show=True)[source]
+

Bases: QMainWindow

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

about()

About the tool

add_mp_to_menu()

change_cwd(path)

Change the current working directory

close(self)

closeEvent(event)

closeEvent reimplementation

edit_preferences([exec_])

Edit Spyder preferences

eventually_add_mp_to_menu(p)

excepthook(type, value, traceback)

A method to replace the sys.excepthook

export_mp(*args, **kwargs)

export_sp(*args, **kwargs)

focus_on_console(*args, **kwargs)

Put focus on the ipython console

load_mp_preset()

load_sp_preset()

new_data_frame_editor([df, title])

Open a new dataframe editor

new_plots([exec_])

open_external_files([fnames, project, ...])

Open external files

open_files(fnames)

Open a file and ask the user how

open_mp(*args, **kwargs)

Open a new main project

open_sp(*args, **kwargs)

Open a subproject and add it to the current main project

register_shortcut(action, shortcut[, context])

Register an action for a shortcut

reset_rcParams()

run([fnames, project, engine, plot_method, ...])

Create a mainwindow and open the given files or project

run_app(*args, **kwargs)

Create a QApplication, open the given files or project and enter the mainloop

save_mp(*args, **kwargs)

Save the current main project.

save_mp_preset()

save_sp(*args, **kwargs)

Save the current sub project.

save_sp_preset()

set_central_widget(name)

Set the central widget

setup_default_layout()

Set up the default window layout

show_dependencies([exec_])

Open a dialog that shows the dependencies

start_open_files_server()

This method listens to the open_files_port and opens the plot creator for new files

update_project_action(num)

+

Attributes:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

central_widget_key

The key for the central widget for the main window in the plugins dictionary

console

Inprocess console

current_shortcuts

The current keyboard shortcuts

dataframeeditors

the DataFrameEditor widgets

default_shortcuts

The keyboard shortcuts of the default layout

default_widths

default widths of the dock widgets

dockwidgets

The dockwidgets of this instance

ds_tree

tree widget displaying the open datasets

figures

list of figures from the psyplot backend

figures_tree

tree widget displaying the open figures

fmt_widget

general formatoptions widget

help_explorer

help explorer

logger

The logger of this instance

open_external(*args, **kwargs)

A signal that is emmitted when the a signal is received through the open_files_server

open_files_server

The server to open external files

project_content

tab widget displaying the arrays in current main and sub project tree widget displaying the open datasets

+
+
+about()[source]
+

About the tool

+
+ +
+
+add_mp_to_menu()[source]
+
+ +
+
+central_widget_key = 'console'
+

The key for the central widget for the main window in the +plugins dictionary

+
+ +
+
+change_cwd(path)[source]
+

Change the current working directory

+
+ +
+
+close(self) → bool[source]
+
+ +
+
+closeEvent(event)[source]
+

closeEvent reimplementation

+
+ +
+
+console = None
+

Inprocess console

+
+ +
+
+current_shortcuts = []
+

The current keyboard shortcuts

+
+ +
+
+dataframeeditors = None
+

the DataFrameEditor widgets

+
+ +
+
+default_shortcuts = []
+

The keyboard shortcuts of the default layout

+
+ +
+
+default_widths = {}
+

default widths of the dock widgets

+
+ +
+
+dockwidgets = []
+

The dockwidgets of this instance

+
+ +
+
+ds_tree = None
+

tree widget displaying the open datasets

+
+ +
+
+edit_preferences(exec_=None)[source]
+

Edit Spyder preferences

+
+ +
+
+eventually_add_mp_to_menu(p)[source]
+
+ +
+
+excepthook(type, value, traceback)[source]
+

A method to replace the sys.excepthook

+
+ +
+
+export_mp(*args, **kwargs)[source]
+
+ +
+
+export_sp(*args, **kwargs)[source]
+
+ +
+
+figures = []
+

list of figures from the psyplot backend

+
+ +
+
+figures_tree = None
+

tree widget displaying the open figures

+
+ +
+
+fmt_widget = None
+

general formatoptions widget

+
+ +
+
+focus_on_console(*args, **kwargs)[source]
+

Put focus on the ipython console

+
+ +
+
+help_explorer = None
+

help explorer

+
+ +
+
+load_mp_preset()[source]
+
+ +
+
+load_sp_preset()[source]
+
+ +
+
+property logger
+

The logger of this instance

+
+ +
+
+new_data_frame_editor(df=None, title='DataFrame Editor')[source]
+

Open a new dataframe editor

+
+
Parameters:
+
    +

  • df (pandas.DataFrame) – The dataframe to display

    • +

  • title (str) – The title of the dock window

    • +
+
+
Returns:
+

The newly created editor

+
+
Return type:
+

psyplot_gui.dataframeeditor.DataFrameEditor

+
+
+
+ +
+
+new_plots(exec_=None)[source]
+
+ +
+
+open_external(*args, **kwargs)
+

A signal that is emmitted when the a signal is received through the +open_files_server

+
+ +
+
+open_external_files(fnames=[], project=None, engine=None, plot_method=None, name=None, dims=None, encoding=None, enable_post=False, seaborn_style=None, concat_dim=None, chname={}, preset=None, decoder=None)[source]
+

Open external files

+
+
Parameters:
+
    +

  • fnames (list of str) – Either the filenames to show, or, if the project parameter is set, +the a list of ,-separated filenames to make a mapping from the +original filename to a new one

    • +

  • name (list of str) – The variable names to plot if the output parameter is set

    • +

  • dims (dict) – A mapping from coordinate names to integers if the project is not +given

    • +

  • plot_method (str) – The name of the plot_method to use

    • +

  • project (str) – If set, the project located at the given file name is loaded

    • +

  • engine (str) – The engine to use for opening the dataset (see +psyplot.data.open_dataset())

    • +

  • encoding (str) – The encoding to use for loading the project. If None, it is +automatically determined by pickle. Note: Set this to 'latin1' +if using a project created with python2 on python3.

    • +

  • enable_post (bool) – Enable the post processing +formatoption. If True/set, post processing scripts are enabled in the +given project. Only set this if you are sure that you can trust the +given project file because it may be a security vulnerability.

    • +

  • seaborn_style (str) – The name of the style of the seaborn package that can be used for +the seaborn.set_style() function

    • +

  • concat_dim (str) – The concatenation dimension if multiple files in fnames are +provided

    • +

  • chname (dict) – A mapping from variable names in the project to variable names in the +datasets that should be used instead

    • +

  • preset (str) – The filename or identifier of a preset. If the given preset is +the path to an existing yaml file, it will be loaded. Otherwise we +look up the preset in the psyplot configuration directory (see +get_configdir()).

    • +

  • decoder (str) – Keyword arguments for the decoder.

    • +
+
+
+
+ +
+
+open_files(fnames)[source]
+

Open a file and ask the user how

+
+ +
+
+open_files_server = None
+

The server to open external files

+
+ +
+
+open_mp(*args, **kwargs)[source]
+

Open a new main project

+
+ +
+
+open_sp(*args, **kwargs)[source]
+

Open a subproject and add it to the current main project

+
+ +
+
+project_content = None
+

tab widget displaying the arrays in current main and sub project +tree widget displaying the open datasets

+
+ +
+
+register_shortcut(action, shortcut, context=2)[source]
+

Register an action for a shortcut

+
+ +
+
+reset_rcParams()[source]
+
+ +
+
+classmethod run(fnames=[], project=None, engine=None, plot_method=None, name=None, dims=None, encoding=None, enable_post=False, seaborn_style=None, concat_dim=None, chname={}, preset=None, decoder=None, show=True)[source]
+

Create a mainwindow and open the given files or project

+

This class method creates a new mainwindow instance and sets the +global mainwindow variable.

+
+
Parameters:
+
    +

  • fnames (list of str) – Either the filenames to show, or, if the project parameter is set, +the a list of ,-separated filenames to make a mapping from the +original filename to a new one

    • +

  • name (list of str) – The variable names to plot if the output parameter is set

    • +

  • dims (dict) – A mapping from coordinate names to integers if the project is not +given

    • +

  • plot_method (str) – The name of the plot_method to use

    • +

  • project (str) – If set, the project located at the given file name is loaded

    • +

  • engine (str) – The engine to use for opening the dataset (see +psyplot.data.open_dataset())

    • +

  • encoding (str) – The encoding to use for loading the project. If None, it is +automatically determined by pickle. Note: Set this to 'latin1' +if using a project created with python2 on python3.

    • +

  • enable_post (bool) – Enable the post processing +formatoption. If True/set, post processing scripts are enabled in the +given project. Only set this if you are sure that you can trust the +given project file because it may be a security vulnerability.

    • +

  • seaborn_style (str) – The name of the style of the seaborn package that can be used for +the seaborn.set_style() function

    • +

  • concat_dim (str) – The concatenation dimension if multiple files in fnames are +provided

    • +

  • chname (dict) – A mapping from variable names in the project to variable names in the +datasets that should be used instead

    • +

  • preset (str) – The filename or identifier of a preset. If the given preset is +the path to an existing yaml file, it will be loaded. Otherwise we +look up the preset in the psyplot configuration directory (see +get_configdir()).

    • +

  • decoder (str) – Keyword arguments for the decoder.

    • +

  • show (bool) – If True, the created mainwindow is show

    • +
+
+
+

Notes

+
    +

  • There can be only one mainwindow at the time

    • +

  • This method does not create a QApplication instance! See +run_app()

    • +
+
+

See also

+

run_app

+
+
+ +
+
+classmethod run_app(*args, **kwargs)[source]
+

Create a QApplication, open the given files or project and enter the +mainloop

+
+
Parameters:
+
    +

  • fnames (list of str) – Either the filenames to show, or, if the project parameter is set, +the a list of ,-separated filenames to make a mapping from the +original filename to a new one

    • +

  • name (list of str) – The variable names to plot if the output parameter is set

    • +

  • dims (dict) – A mapping from coordinate names to integers if the project is not +given

    • +

  • plot_method (str) – The name of the plot_method to use

    • +

  • project (str) – If set, the project located at the given file name is loaded

    • +

  • engine (str) – The engine to use for opening the dataset (see +psyplot.data.open_dataset())

    • +

  • encoding (str) – The encoding to use for loading the project. If None, it is +automatically determined by pickle. Note: Set this to 'latin1' +if using a project created with python2 on python3.

    • +

  • enable_post (bool) – Enable the post processing +formatoption. If True/set, post processing scripts are enabled in the +given project. Only set this if you are sure that you can trust the +given project file because it may be a security vulnerability.

    • +

  • seaborn_style (str) – The name of the style of the seaborn package that can be used for +the seaborn.set_style() function

    • +

  • concat_dim (str) – The concatenation dimension if multiple files in fnames are +provided

    • +

  • chname (dict) – A mapping from variable names in the project to variable names in the +datasets that should be used instead

    • +

  • preset (str) – The filename or identifier of a preset. If the given preset is +the path to an existing yaml file, it will be loaded. Otherwise we +look up the preset in the psyplot configuration directory (see +get_configdir()).

    • +

  • decoder (str) – Keyword arguments for the decoder.

    • +

  • show (bool) – If True, the created mainwindow is show

    • +
+
+
+
+

See also

+

run

+
+
+ +
+
+save_mp(*args, **kwargs)[source]
+

Save the current main project.

+
+ +
+
+save_mp_preset()[source]
+
+ +
+
+save_sp(*args, **kwargs)[source]
+

Save the current sub project.

+
+ +
+
+save_sp_preset()[source]
+
+ +
+
+set_central_widget(name)[source]
+

Set the central widget

+
+
Parameters:
+

name (str or QWidget) – The key or the plugin widget in the plugins dictionary

+
+
+
+ +
+
+setup_default_layout()[source]
+

Set up the default window layout

+
+ +
+
+show_dependencies(exec_=None)[source]
+

Open a dialog that shows the dependencies

+
+ +
+
+start_open_files_server()[source]
+

This method listens to the open_files_port and opens the plot +creator for new files

+

This method is inspired and to most parts copied from spyder

+
+ +
+
+update_project_action(num)[source]
+
+ +
+ +
+
+psyplot_gui.main.mainwindow = None
+

The PyQt5.QtWidgets.QMainWindow of the graphical user interface

+
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.plot_creator.html b/api/psyplot_gui.plot_creator.html new file mode 100644 index 0000000..e102ba6 --- /dev/null +++ b/api/psyplot_gui.plot_creator.html @@ -0,0 +1,1670 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

This module contains a widget to create new plots with psyplot

+

The main class is the PlotCreator which is used to handle the +different plotting methods of the psyplot.project.ProjectPlotter +class

+

Classes:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

ArrayNameItemDelegate

Delegate using the ArrayNameValidator for validation

ArrayNameValidator(text, table, *args, **kwargs)

Class to make sure that only those arrays names are inserted that are not currently in the main project or the tree

ArrayTable(get_func[, columns])

Table that shows the arrays that will be used for plotting

AxesCreator([fig, x0, y0, x1, y1])

Widget to setup an axes in a arbitrary location

AxesCreatorCollection([key, func_kwargs])

Wrapper for a QToolBox that holds the different possibilities to select an axes

AxesSelector(*args, **kwargs)

Widget to select an already created axes

AxesViewer(*args, **kwargs)

Widget to show a rectangle

CoordComboBox(ds_func, dim[, parent])

Combobox showing coordinate information of a dataset

CoordsTable(get_func, *args, **kwargs)

A table showing the coordinates of in a dataset via instances of CoordComboBox

DragDropTable(*args, **kwargs)

Table that allows to exchange rows via drag and drop

PlotCreator(*args, **kwargs)

Widget to extract data from a dataset and eventually create a plot

SubplotCreator([fig, rows, cols, num1, num2])

Select a subplot to which will be created (if not already existing) when making the plot

VariableItemDelegate

Delegate alowing only the variables in the parents dataset.

VariablesTable(get_func[, columns])

Table to display the variables of a dataset

+
+
+class psyplot_gui.plot_creator.ArrayNameItemDelegate[source]
+

Bases: QStyledItemDelegate

+

Delegate using the ArrayNameValidator for validation

+

Methods:

+ + + + + + +

createEditor(self, parent, option, index)

+
+
+createEditor(self, parent: QWidget | None, option: QStyleOptionViewItem, index: QModelIndex) → QWidget | None[source]
+
+ +
+ +
+
+class psyplot_gui.plot_creator.ArrayNameValidator(text, table, *args, **kwargs)[source]
+

Bases: QValidator

+

Class to make sure that only those arrays names are inserted that are +not currently in the main project or the tree

+

Methods:

+ + + + + + + + + +

fixup(self, a0)

validate(self, a0, a1)

+
+
+fixup(self, a0: str | None) → str[source]
+
+ +
+
+validate(self, a0: str | None, a1: int)[source]
+
+ +
+ +
+
+class psyplot_gui.plot_creator.ArrayTable(get_func, columns=[], *args, **kwargs)[source]
+

Bases: DragDropTable

+

Table that shows the arrays that will be used for plotting

+

It contains the following columns:

+
    +

  1. The variable column which holds the variable names of the arrays. +multiple variables may be separated by ‘;;’

    2. +

  2. The array name. The psyplot.data.InteractiveBase.arr_name +attribute. Depending on the plot methods +_prefer_list, multiple +array names are allowed or not. If this attribute is True, +arrays with the same array name will be concatenated into one +psyplot.data.InteractiveList

    3. +

  3. The axes column. Use the right-click context menu to select a +subplot

    4. +

  4. The check column. Checks for variable names, array names, axes and +dimensions via the psyplot.project._PlotterInterface.check_data() +method

    5. +

  5. Columns containing the dimension informations

    6. +
+

Attributes:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

DIMS_TT

Base tool tip for a dimension column

VARIABLE_TT

Tool tip for the variable column

arr_col

The index of the array name column

arr_names_dict

The final dictionary containing the array names necessary for the arr_names parameter in the psyplot.data.ArrayList.from_dataset() method

axes

A list of axes settings corresponding to the arrays in the arr_names_dict

axes_col

The index of the axes column

axes_patt

pattern to interprete arbitrary axes

check_col

The index of the check column

current_names

The names that are currently in use

prefer_list

Return the _prefer_list attribute of the plot_method

sep

The separator for variable names

subplot_patt

Pattern to interprete subplots

var_col

The index of the variable column

vnames

The list of variable names per array

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

add_single_subplot(rows, cols, row, col)

Add one subplot to the selected arrays on multiple figures

add_subplots(rows, cols[, maxn])

Add multiple subplots to the selected arrays

axes_creator_action(rows)

Action to open a AxesCreatorCollection for the selected rows

axes_info(s)

Interpretes an axes information

check_array(row[, ignore_duplicates])

check whether the array variables are valid, the array name is valid, the axes info is valid and the dimensions

check_arrays(**kwargs)

Convenience function to check all arrays using the check_array() method

check_item(item)

Check the array corresponding to the given item

dropEvent(event)

Reimplemented to call the check_arrays() after the call

get_all_rows(row)

Return all the rows that have the same array name as the given row

insert_array(name[, check])

Appends the settings for an array the the list in a new row

next_available_name(*args, **kwargs)

Gives the next possible name to use

remove_arrays([selected])

Remove array rows from the list

set_columns(columns)

Set the columns of the table

set_pm(s)

Set the plot method

setup_from_ds([ds, plot_method])

Fill the table based upon the given dataset.

showAxesCreator(pos)

Context menu for right-click on a row

update_other_items(item)

Updates the axes information of the other items corresponding that have the same array name as the array corresponding to the given item

update_selected([check, dims])

Updates the dimensions of the selectiond arrays with the given dims

+
+
+DIMS_TT = "The values for dimension %s. You can use integers either explicit, e.g.<ul><li>1, 2, 3, ...,</li></ul>or slices like <em>start:end:step</em>, e.g.<ul><li>'1:6:2'</li></ul>where the latter is equivalent to '1, 3, 5'"
+

Base tool tip for a dimension column

+
+ +
+
+VARIABLE_TT = "The variables of the array from the dataset. Multiplevariables for one array may be separated by ';;'"
+

Tool tip for the variable column

+
+ +
+
+add_single_subplot(rows, cols, row, col)[source]
+

Add one subplot to the selected arrays on multiple figures

+
+ +
+
+add_subplots(rows, cols, maxn=None)[source]
+

Add multiple subplots to the selected arrays

+
+ +
+
+property arr_col
+

The index of the array name column

+
+ +
+
+property arr_names_dict
+

The final dictionary containing the array names necessary for the +arr_names parameter in the +psyplot.data.ArrayList.from_dataset() method

+
+ +
+
+property axes
+

A list of axes settings corresponding to the arrays in the +arr_names_dict

+
+ +
+
+property axes_col
+

The index of the axes column

+
+ +
+
+axes_creator_action(rows)[source]
+

Action to open a AxesCreatorCollection for the selected +rows

+
+ +
+
+axes_info(s)[source]
+

Interpretes an axes information

+
+ +
+
+axes_patt = re.compile('\\((?P<fig>\\d+),\\s*(?P<x0>0*\\.\\d+),\\s*(?P<y0>0*\\.\\d+),\\s*(?P<x1>0*\\.\\d+),\\s*(?P<y1>0*\\.\\d+)\\s*\\)')
+

pattern to interprete arbitrary axes

+
+ +
+
+check_array(row, ignore_duplicates=[])[source]
+

check whether the array variables are valid, the array name is +valid, the axes info is valid and the dimensions

+
+ +
+
+check_arrays(**kwargs)[source]
+

Convenience function to check all arrays using the +check_array() method

+
+ +
+
+property check_col
+

The index of the check column

+
+ +
+
+check_item(item)[source]
+

Check the array corresponding to the given item

+
+ +
+
+property current_names
+

The names that are currently in use

+
+ +
+
+dropEvent(event)[source]
+

Reimplemented to call the check_arrays() after the call

+
+ +
+
+get_all_rows(row)[source]
+

Return all the rows that have the same array name as the given row

+
+ +
+
+insert_array(name, check=True, **kwargs)[source]
+

Appends the settings for an array the the list in a new row

+
+ +
+
+next_available_name(*args, **kwargs)[source]
+

Gives the next possible name to use

+
+ +
+
+property prefer_list
+

Return the _prefer_list attribute of the plot_method

+
+ +
+
+remove_arrays(selected=True)[source]
+

Remove array rows from the list

+
+
Parameters:
+

selected (bool) – If True, only the selected rows are removed

+
+
+
+ +
+
+sep = ';;'
+

The separator for variable names

+
+ +
+
+set_columns(columns)[source]
+

Set the columns of the table

+
+
Parameters:
+

columns (list of str) – The coordinates in the dataset

+
+
+
+ +
+
+set_pm(s)[source]
+

Set the plot method

+
+ +
+
+setup_from_ds(ds=None, plot_method=None)[source]
+

Fill the table based upon the given dataset.

+
+
Parameters:
+
    +

  • ds (xarray.Dataset or None) – If None, the dataset from the get_ds function is used

    • +

  • plot_method (psyplot.project._PlotterInterface or None) – The plot method of the psyplot.project.ProjectPlotter +class or None if no plot shall be made

    • +
+
+
+
+ +
+
+showAxesCreator(pos)[source]
+

Context menu for right-click on a row

+
+ +
+
+subplot_patt = re.compile('\\((?P<fig>\\d+),\\s*(?P<rows>\\d+),\\s*(?P<cols>\\d+),\\s*(?P<num1>\\d+),\\s*(?P<num2>\\d+)\\s*\\)')
+

Pattern to interprete subplots

+
+ +
+
+update_other_items(item)[source]
+

Updates the axes information of the other items corresponding +that have the same array name as the array corresponding to the given +item

+
+ +
+
+update_selected(check=True, dims={})[source]
+

Updates the dimensions of the selectiond arrays with the given +dims

+
+
Parameters:
+
    +

  • check (bool) – whether the array shall be checked afterwards

    • +

  • dims (dict) – a mapping from coordinate names to string values that shall be +appended to the current text

    • +
+
+
+
+ +
+
+property var_col
+

The index of the variable column

+
+ +
+
+property vnames
+

The list of variable names per array

+
+ +
+ +
+
+class psyplot_gui.plot_creator.AxesCreator(fig=None, x0=0.125, y0=0.1, x1=0.9, y1=0.9, *args, **kwargs)[source]
+

Bases: QWidget

+

Widget to setup an axes in a arbitrary location

+

Methods:

+ + + + + + + + + + + + +

create_axes(fig, x0, y0, x1, y1, **kwargs)

Create an axes for the given fig

get_iter()

Get the iterator over the axes

resize_rectangle(size)

resize the rectangle after changes of the widget size

+
+
+static create_axes(fig, x0, y0, x1, y1, **kwargs)[source]
+

Create an axes for the given fig

+
+
Parameters:
+
    +

  • fig (int or None) – The figure number. If None, a new figure number will be used

    • +

  • x0 (float) – the x-coordinate of the lower left corner (between 0 and 1)

    • +

  • y0 (float) – the y-coordinate of the lower left corner (between 0 and 1)

    • +

  • x1 (float) – the x-coordinate of the upper right corner (between 0 and 1)

    • +

  • y1 (float) – the y-coordinate of the upper right corner (between 0 and 1)

    • +

  • **kwargs – Any other keyword argument for the +matplotlib.figure.Figure.add_axes() method

    • +
+
+
+
+ +
+
+get_iter()[source]
+

Get the iterator over the axes

+
+ +
+
+resize_rectangle(size)[source]
+

resize the rectangle after changes of the widget size

+
+ +
+ +
+
+class psyplot_gui.plot_creator.AxesCreatorCollection(key=None, func_kwargs={}, *args, **kwargs)[source]
+

Bases: QDialog

+

Wrapper for a QToolBox that holds the different possibilities to select +an axes

+

When the user finished, the okpressed symbol is emitted with an +infinite iterator of strings. Possible widgets for the toolbox are +determined by the widgets attribute

+

Methods:

+ + + + + + + + + +

close()

reimplemented to make sure that all widgets are closed when this one is closed

create_subplot()

Method that is called whenn the ok button is pressed.

+

Attributes:

+ + + + + + + + + +

okpressed(*args, **kwargs)

signal that is emitted when the 'Ok' pushbutton is pressed and the user finished the selection

widgets

key, title and class fot the widget that is used to create an axes

+
+
+close()[source]
+

reimplemented to make sure that all widgets are closed when this one +is closed

+
+ +
+
+create_subplot()[source]
+

Method that is called whenn the ok button is pressed.

+

It emits the okpressed signal with the iterator of the current +widget in the toolbox

+
+ +
+
+okpressed(*args, **kwargs)
+

signal that is emitted when the ‘Ok’ pushbutton is pressed and the user +finished the selection

+
+ +
+
+widgets = [('subplot', 'Subplot in a grid', <class 'psyplot_gui.plot_creator.SubplotCreator'>), ('axes', 'Arbitray position', <class 'psyplot_gui.plot_creator.AxesCreator'>), ('choose', 'Existing subplot', <class 'psyplot_gui.plot_creator.AxesSelector'>)]
+

key, title and class fot the widget that is used to create an +axes

+
+ +
+ +
+
+class psyplot_gui.plot_creator.AxesSelector(*args, **kwargs)[source]
+

Bases: QWidget

+

Widget to select an already created axes

+

Click the button, select your axes and click the button again

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

allow_axes_select()

Replace make all axes pickable

change_pickers(b)

Change the pickers of the axes instances

close()

Reimplemented to restore the pickers if the widget is closed

get_iter()

Get the iterator over the axes

get_picked_ax(event)

Function to be called when an axes is picked

inspect_axes(ax)

Inspect the given axes and get the right string for making a plot with it

restore_pickers()

Restore the original pickers of the existing axes instances

setVisible(b)

Reimplemented to restore the pickers if the widget is made invisible

unclick()

Restore the original pickers

+
+
+allow_axes_select()[source]
+

Replace make all axes pickable

+
+ +
+
+change_pickers(b)[source]
+

Change the pickers of the axes instances

+

If the push button is clicked, we replace the existing pickers of the +axes in order to select the plots. Otherwise we restore them

+
+ +
+
+close()[source]
+

Reimplemented to restore the pickers if the widget is closed

+
+ +
+
+get_iter()[source]
+

Get the iterator over the axes

+
+ +
+
+get_picked_ax(event)[source]
+

Function to be called when an axes is picked

+
+ +
+
+inspect_axes(ax)[source]
+

Inspect the given axes and get the right string for making a plot +with it

+
+ +
+
+restore_pickers()[source]
+

Restore the original pickers of the existing axes instances

+
+ +
+
+setVisible(b)[source]
+

Reimplemented to restore the pickers if the widget is made invisible

+
+ +
+
+unclick()[source]
+

Restore the original pickers

+
+ +
+ +
+
+class psyplot_gui.plot_creator.AxesViewer(*args, **kwargs)[source]
+

Bases: QGraphicsView

+

Widget to show a rectangle

+

Methods:

+ + + + + + +

resizeEvent(self, event)

+

Attributes:

+ + + + + + +

sizeChanged(*args, **kwargs)

+
+
+resizeEvent(self, event: QResizeEvent | None)[source]
+
+ +
+
+sizeChanged(*args, **kwargs)
+
+ +
+ +
+
+class psyplot_gui.plot_creator.CoordComboBox(ds_func, dim, parent=None)[source]
+

Bases: QComboBox

+

Combobox showing coordinate information of a dataset

+

This combobox loads its data from the current dataset and allows the +popups to be left open. It also has a leftclick signal that is +emitted when the popup is about to be closed because the user clicked on a +value

+

Attributes:

+ + + + + + + + + + + + +

close_popups

leftclick(*args, **kwargs)

use_coords

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + +

eventFilter(obj, event)

Reimplemented to filter right-click events on the view()

handleItemPressed(index)

Function to be called when an item is pressed to make sure that we know whether anything changed before closing the popup

hidePopup()

Reimplemented to only close the popup when the close_popup attribute is True or it is clicked outside the window

hide_anyway([index])

Function to hide the popup despite of the _changed attribute

load_coord()

Load the coordinate data from the dataset and fill the combobox with it (if it is empty)

mouseDoubleClickEvent(*args, **kwargs)

Reimplemented to fill the box with content from the dataset

mousePressEvent(*args, **kwargs)

Reimplemented to fill the box with content from the dataset

right_click(point)

Function that is called when an item is right_clicked

+
+
+property close_popups
+
+ +
+
+eventFilter(obj, event)[source]
+

Reimplemented to filter right-click events on the view()

+
+ +
+
+handleItemPressed(index)[source]
+

Function to be called when an item is pressed to make sure that +we know whether anything changed before closing the popup

+
+ +
+
+hidePopup()[source]
+

Reimplemented to only close the popup when the close_popup +attribute is True or it is clicked outside the window

+
+ +
+
+hide_anyway(index=None)[source]
+

Function to hide the popup despite of the _changed attribute

+
+ +
+
+leftclick(*args, **kwargs)
+
+ +
+
+load_coord()[source]
+

Load the coordinate data from the dataset and fill the combobox with +it (if it is empty)

+
+ +
+
+mouseDoubleClickEvent(*args, **kwargs)[source]
+

Reimplemented to fill the box with content from the dataset

+
+ +
+
+mousePressEvent(*args, **kwargs)[source]
+

Reimplemented to fill the box with content from the dataset

+
+ +
+
+right_click(point)[source]
+

Function that is called when an item is right_clicked

+
+ +
+
+property use_coords
+
+ +
+ +
+
+class psyplot_gui.plot_creator.CoordsTable(get_func, *args, **kwargs)[source]
+

Bases: QTableWidget

+

A table showing the coordinates of in a dataset via instances of +CoordComboBox

+

Attributes:

+ + + + + + +

combo_boxes

A list of CoordComboBox in this table

+

Methods:

+ + + + + + + + + +

fill_from_ds([ds])

Clear the table and create new comboboxes

sizeHint()

Reimplemented to adjust the heigth based upon the header and the first row

+
+
+property combo_boxes
+

A list of CoordComboBox in this table

+
+ +
+
+fill_from_ds(ds=None)[source]
+

Clear the table and create new comboboxes

+
+ +
+
+sizeHint()[source]
+

Reimplemented to adjust the heigth based upon the header and the +first row

+
+ +
+ +
+
+class psyplot_gui.plot_creator.DragDropTable(*args, **kwargs)[source]
+

Bases: QTableWidget

+

Table that allows to exchange rows via drag and drop

+

This class was mainly taken from +http://stackoverflow.com/questions/26227885/drag-and-drop-rows-within-qtablewidget

+

Methods:

+ + + + + + + + + + + + + + + + + + +

dropEvent(self, event)

dropOn(event)

droppingOnItself(event, index)

moveRows(row[, remove])

Move all selected rows to the given row

position(pos, rect, index)

+
+
+dropEvent(self, event: QDropEvent | None)[source]
+
+ +
+
+dropOn(event)[source]
+
+ +
+
+droppingOnItself(event, index)[source]
+
+ +
+
+moveRows(row, remove=False)[source]
+

Move all selected rows to the given row

+
+ +
+
+position(pos, rect, index)[source]
+
+ +
+ +
+
+class psyplot_gui.plot_creator.PlotCreator(*args, **kwargs)[source]
+

Bases: QDialog

+

Widget to extract data from a dataset and eventually create a plot

+

Attributes:

+ + + + + + +

NO_PM_TT

Tooltip for not making a plot

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

add_new_ds(oname, ds[, fname])

close(*args, **kwargs)

Reimplemented to make sure that the data sets are deleted

connect_combo_boxes()

create_plots()

Method to be called when the Create plot button is pressed

fill_ds_combo(project)

fill the dataset combobox with datasets of the current main project

fill_fmt_tree(pm)

fill_plot_method_combo()

Takes the names of the plotting methods in the current project

get_ds([i])

Get the dataset

insert_array([variables])

Inserts an array for the given variables (or the ones selected in the variable_table if variables is None)

insert_array_from_combo(cb[, variables])

Insert new arrays into the dataset when the combobox is left-clicked

keyPressEvent(e)

Reimplemented to close the window when escape is hitted

load_preset()

Load a preset file

open_data(*args, **kwargs)

Convenience method to create a sub project without a plotter

open_dataset([fnames])

Opens a file dialog and the dataset that has been inserted

reset_comboboxes()

Clear all comboboxes

set_decoder(decoder)

Set the decoder for the new plots.

set_ds(i)

Set the current dataset

set_pm(plot_method)

set_preset(preset)

setup_subplot()

Method to be emitted to setup one subplot at a specific location for each of the selected arrays on separate (new) figures

setup_subplots()

Method to be emitted to setup the subplots for the selected arrays on new figures

show_pm_info()

Shows info on the current plotting method in the help explorer

switch2ds(ds)

Switch to the given dataset

toggle_close_popups()

Change the automatic closing of popups

+
+
+NO_PM_TT = 'Choose a plot method (or choose none to only extract the data)'
+

Tooltip for not making a plot

+
+ +
+
+add_new_ds(oname, ds, fname=None)[source]
+
+ +
+
+close(*args, **kwargs)[source]
+

Reimplemented to make sure that the data sets are deleted

+
+ +
+
+connect_combo_boxes()[source]
+
+ +
+
+create_plots()[source]
+

Method to be called when the Create plot button is pressed

+

This method reads the data from the array_table attribute and +makes the plot (or extracts the data) based upon the +plot_method attribute

+
+ +
+
+fill_ds_combo(project)[source]
+

fill the dataset combobox with datasets of the current main project

+
+ +
+
+fill_fmt_tree(pm)[source]
+
+ +
+
+fill_plot_method_combo()[source]
+

Takes the names of the plotting methods in the current project

+
+ +
+
+get_ds(i=None)[source]
+

Get the dataset

+
+
Parameters:
+

i (int or None) – If None, the dataset of the current index in the ds_combo is +returned. Otherwise it specifies the locdation of the dictionary in +the ds_descs attribute

+
+
Returns:
+

The requested dataset

+
+
Return type:
+

xarray.Dataset

+
+
+
+ +
+
+insert_array(variables=None)[source]
+

Inserts an array for the given variables (or the ones selected in +the variable_table if variables is None)

+
+ +
+
+insert_array_from_combo(cb, variables=None)[source]
+

Insert new arrays into the dataset when the combobox is left-clicked

+
+ +
+
+keyPressEvent(e)[source]
+

Reimplemented to close the window when escape is hitted

+
+ +
+
+load_preset()[source]
+

Load a preset file

+
+ +
+
+open_data(*args, **kwargs)[source]
+

Convenience method to create a sub project without a plotter

+

This method is used when the pm_combo is empty

+
+ +
+
+open_dataset(fnames=None, *args, **kwargs)[source]
+

Opens a file dialog and the dataset that has been inserted

+
+ +
+
+reset_comboboxes()[source]
+

Clear all comboboxes

+
+ +
+
+set_decoder(decoder)[source]
+

Set the decoder for the new plots.

+
+ +
+
+set_ds(i)[source]
+

Set the current dataset

+
+ +
+
+set_pm(plot_method)[source]
+
+ +
+
+set_preset(preset)[source]
+
+ +
+
+setup_subplot()[source]
+

Method to be emitted to setup one subplot at a specific location +for each of the selected arrays on separate (new) figures

+
+ +
+
+setup_subplots()[source]
+

Method to be emitted to setup the subplots for the selected arrays +on new figures

+
+ +
+
+show_pm_info()[source]
+

Shows info on the current plotting method in the help explorer

+
+ +
+
+switch2ds(ds)[source]
+

Switch to the given dataset

+
+
Parameters:
+

ds (xarray.Dataset) – The dataset to use. It is assumed that this dataset is already +in the dataset combobox

+
+
+
+ +
+
+toggle_close_popups()[source]
+

Change the automatic closing of popups

+
+ +
+ +
+
+class psyplot_gui.plot_creator.SubplotCreator(fig=None, rows=1, cols=1, num1=1, num2=None, *args, **kwargs)[source]
+

Bases: QWidget

+

Select a subplot to which will be created (if not already existing) when +making the plot

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + +

create_subplot([fig, rows, cols, num1, num2])

Create a subplot for the given figure

get_iter()

Get the iterator over the axes

set_num2_validator(s)

Set the validator range for the num2 line edit

set_selected(num1, num2)

Update the selection in the table based upon num1 and num2

set_selected_from_num1(s)

Update the selection of the table after changes of num1_edit

set_selected_from_num2(s)

Update the selection of the table after changes of num2_edit

setup_table()

Set up the table based upon the number of rows and columns in the rows and cols line edit

update_num_edit()

Update the num1_edit and num2_edit after the selection of the table changed

+
+
+static create_subplot(fig=None, rows=1, cols=1, num1=1, num2=None, **kwargs)[source]
+

Create a subplot for the given figure

+
+
Parameters:
+
    +

  • fig (matplotlib.figure.Figure or int) – If integer, the matplotlib.pyplot.figure() function is used

    • +

  • rows (int) – Number of rows for the gridspec

    • +

  • cols (int) – Number of columns for the gridspec

    • +

  • num1 (int) – The subplot number of the upper left corner in the grid (starting +from 1!)

    • +

  • num2 (None or int) – The subplot number of the lower left corner in the grid (starting +from 1!). If None, num1 will be used

    • +

  • **kwargs – Any other keyword argument for the +matplotlib.figure.Figure.add_subplot() method

    • +
+
+
Returns:
+

The new created subplot

+
+
Return type:
+

mpl.axes.Subplot

+
+
+
+ +
+
+get_iter()[source]
+

Get the iterator over the axes

+
+ +
+
+set_num2_validator(s)[source]
+

Set the validator range for the num2 line edit

+
+ +
+
+set_selected(num1, num2)[source]
+

Update the selection in the table based upon num1 and num2

+
+ +
+
+set_selected_from_num1(s)[source]
+

Update the selection of the table after changes of +num1_edit

+
+ +
+
+set_selected_from_num2(s)[source]
+

Update the selection of the table after changes of num2_edit

+
+ +
+
+setup_table()[source]
+

Set up the table based upon the number of rows and columns in the +rows and cols line edit

+
+ +
+
+update_num_edit()[source]
+

Update the num1_edit and num2_edit after the +selection of the table changed

+
+ +
+ +
+
+class psyplot_gui.plot_creator.VariableItemDelegate[source]
+

Bases: QStyledItemDelegate

+

Delegate alowing only the variables in the parents dataset.

+

The parent must hold a get_ds method that returns a dataset when called

+

Methods:

+ + + + + + +

createEditor(self, parent, option, index)

+
+
+createEditor(self, parent: QWidget | None, option: QStyleOptionViewItem, index: QModelIndex) → QWidget | None[source]
+
+ +
+ +
+
+class psyplot_gui.plot_creator.VariablesTable(get_func, columns=['long_name', 'dims', 'shape'], *args, **kwargs)[source]
+

Bases: QTableWidget

+

Table to display the variables of a dataset

+

Methods:

+ + + + + + + + + +

fill_from_ds([ds])

Clear the table and insert items from the given dataset

set_columns([columns])

+

Attributes:

+ + + + + + + + + +

selected_variables

The currently selected variables

variables

The variables in the dataset

+
+
+fill_from_ds(ds=None)[source]
+

Clear the table and insert items from the given dataset

+
+ +
+
+property selected_variables
+

The currently selected variables

+
+ +
+
+set_columns(columns=None)[source]
+
+ +
+
+variables = []
+

The variables in the dataset

+
+ +
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.preferences.html b/api/psyplot_gui.preferences.html new file mode 100644 index 0000000..ea97431 --- /dev/null +++ b/api/psyplot_gui.preferences.html @@ -0,0 +1,958 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Preferences widget for psyplot_gui

+

This module defines the Preferences widget that creates an interface +to the rcParams of psyplot and psyplot_gui

+

Classes:

+ + + + + + + + + + + + + + + + + + + + + +

ConfigPage()

An abstract base class for configuration pages

GuiRcParamsWidget(*args, **kwargs)

The config page for the psyplot_gui.config.rcsetup.rcParams

Prefences([main])

Preferences dialog

PsyRcParamsWidget(*args, **kwargs)

The config page for the psyplot.config.rcsetup.rcParams

RcParamsTree(rcParams, validators, ...)

A QTreeWidget that can be used to display a RcParams instance

RcParamsWidget(*args, **kwargs)

A configuration page for RcParams instances

+
+
+class psyplot_gui.preferences.ConfigPage[source]
+

Bases: object

+

An abstract base class for configuration pages

+

Methods:

+ + + + + + + + + +

apply_changes()

Apply the planned changes

initialize()

Initialize the page

+

Attributes:

+ + + + + + + + + + + + + + + + + + + + + + + + +

auto_updates

bool that is True, if the changes in this ConfigPage are set immediately

changed

Check whether the preferences will change

icon

The icon of the page

is_valid

Check whether the page is valid

propose_changes(*args, **kwargs)

A signal that is emitted if changes are propsed.

title

The title for the config page

validChanged(*args, **kwargs)

A signal that shall be emitted if the validation state changes

+
+
+apply_changes()[source]
+

Apply the planned changes

+
+ +
+
+auto_updates = False
+

bool that is True, if the changes in this ConfigPage are set +immediately

+
+ +
+
+property changed
+

Check whether the preferences will change

+
+ +
+
+icon = None
+

The icon of the page

+
+ +
+
+initialize()[source]
+

Initialize the page

+
+ +
+
+property is_valid
+

Check whether the page is valid

+
+ +
+
+propose_changes(*args, **kwargs)
+

A signal that is emitted if changes are propsed. The signal should be +emitted with the instance of the page itself

+
+ +
+
+title = None
+

The title for the config page

+
+ +
+
+validChanged(*args, **kwargs)
+

A signal that shall be emitted if the validation state changes

+
+ +
+ +
+
+class psyplot_gui.preferences.GuiRcParamsWidget(*args, **kwargs)[source]
+

Bases: RcParamsWidget

+

The config page for the psyplot_gui.config.rcsetup.rcParams

+

Attributes:

+ + + + + + + + + + + + +

default_path

rc

the rcParams to use (must be implemented by subclasses)

title

The title for the config page

+
+
+default_path = '/root/.config/psyplot/psyplotguirc.yml'
+
+ +
+
+rc = {'backend': 'psyplot', 'console.auto_set_mp': True, 'console.auto_set_sp': True, 'console.connect_to_help': True, 'console.start_channels': True, 'content.load_tooltips': True, 'fmt.sort_by_key': True, 'help_explorer.online': None, 'help_explorer.render_docs_parallel': True, 'help_explorer.use_intersphinx': None, 'help_explorer.use_webengineview': True, 'main.listen_to_port': True, 'main.open_files_port': 30124, 'main.opengl': 'software', 'plugins.exclude': [], 'plugins.include': None}
+

the rcParams to use (must be implemented by subclasses)

+
+ +
+
+title = 'GUI defaults'
+

The title for the config page

+
+ +
+ +
+
+class psyplot_gui.preferences.Prefences(main=None)[source]
+

Bases: QDialog

+

Preferences dialog

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + +

accept()

Reimplement Qt method

add_page(widget)

Add a new page to the preferences dialog

apply_clicked()

check_changes(configpage)

Enable the apply button if there are changes to the settings

current_page_changed(index)

get_page([index])

Return page widget

load_plugin_pages()

Load the rcParams for the plugins in separate pages

set_current_index(index)

Set current page index

+

Attributes:

+ + + + + + + + + +

bt_apply

pages

+
+
+accept()[source]
+

Reimplement Qt method

+
+ +
+
+add_page(widget)[source]
+

Add a new page to the preferences dialog

+
+
Parameters:
+

widget (ConfigPage) – The page to add

+
+
+
+ +
+
+apply_clicked()[source]
+
+ +
+
+property bt_apply
+
+ +
+
+check_changes(configpage)[source]
+

Enable the apply button if there are changes to the settings

+
+ +
+
+current_page_changed(index)[source]
+
+ +
+
+get_page(index=None)[source]
+

Return page widget

+
+ +
+
+load_plugin_pages()[source]
+

Load the rcParams for the plugins in separate pages

+
+ +
+
+property pages
+
+ +
+
+set_current_index(index)[source]
+

Set current page index

+
+ +
+ +
+
+class psyplot_gui.preferences.PsyRcParamsWidget(*args, **kwargs)[source]
+

Bases: RcParamsWidget

+

The config page for the psyplot.config.rcsetup.rcParams

+

Attributes:

+ + + + + + + + + + + + +

default_path

rc

the rcParams to use (must be implemented by subclasses)

title

The title for the config page

+
+
+default_path = '/root/.config/psyplot/psyplotrc.yml'
+
+ +
+
+rc = {'auto_draw': True, 'auto_show': False, 'colors.cmaps': {}, 'datapath': None, 'decoder.interp_kind': 'linear', 'decoder.t': {'time'}, 'decoder.x': {}, 'decoder.y': {}, 'decoder.z': {}, 'gridweights.use_cdo': None, 'lists.auto_update': True, 'plotter.bar.alpha': 1.0, 'plotter.bar.categorical': None, 'plotter.bar.coord': None, 'plotter.bar.plot': 'bar', 'plotter.bar.widths': 'equal', 'plotter.baseplotter.background': 'rc', 'plotter.baseplotter.figtitle': '', 'plotter.baseplotter.figtitleprops': {}, 'plotter.baseplotter.figtitlesize': 12.0, 'plotter.baseplotter.figtitleweight': None, 'plotter.baseplotter.mask': None, 'plotter.baseplotter.maskbetween': None, 'plotter.baseplotter.maskgeq': None, 'plotter.baseplotter.maskgreater': None, 'plotter.baseplotter.maskleq': None, 'plotter.baseplotter.maskless': None, 'plotter.baseplotter.text': [], 'plotter.baseplotter.tight': False, 'plotter.baseplotter.title': '', 'plotter.baseplotter.titleprops': {}, 'plotter.baseplotter.titlesize': 'large', 'plotter.baseplotter.titleweight': None, 'plotter.combinedsimple.plot': 'mesh', 'plotter.combinedsimple.vbounds': [BoundsMethod.rounded, None, 0.0, 100.0, None, None], 'plotter.combinedsimple.vcbar': {'b'}, 'plotter.combinedsimple.vcbarspacing': 'uniform', 'plotter.combinedsimple.vclabel': '', 'plotter.combinedsimple.vclabelprops': {}, 'plotter.combinedsimple.vclabelsize': 'medium', 'plotter.combinedsimple.vclabelweight': None, 'plotter.combinedsimple.vcmap': 'white_blue_red', 'plotter.combinedsimple.vcticklabels': None, 'plotter.combinedsimple.vctickprops': {}, 'plotter.combinedsimple.vcticks': None, 'plotter.combinedsimple.vcticksize': 'medium', 'plotter.combinedsimple.vctickweight': None, 'plotter.combinedsimple.vplot': 'quiver', 'plotter.density.bins': 10, 'plotter.density.coord': None, 'plotter.density.density': 'hist', 'plotter.density.normed': None, 'plotter.density.precision': 0.0, 'plotter.density.xrange': ('minmax', 'minmax'), 'plotter.density.yrange': ('minmax', 'minmax'), 'plotter.fldmean.err_calc': 'std', 'plotter.fldmean.mean': 'mean', 'plotter.line.coord': None, 'plotter.line.error': 'fill', 'plotter.line.erroralpha': 0.15, 'plotter.line.linewidth': None, 'plotter.line.marker': None, 'plotter.line.markersize': None, 'plotter.line.plot': '-', 'plotter.plot2d.bounds': [BoundsMethod.rounded, None, 0.0, 100.0, None, None], 'plotter.plot2d.cbar': {'b'}, 'plotter.plot2d.cbarspacing': 'uniform', 'plotter.plot2d.clabel': '', 'plotter.plot2d.clabelprops': {}, 'plotter.plot2d.clabelsize': 'medium', 'plotter.plot2d.clabelweight': None, 'plotter.plot2d.cmap': 'white_blue_red', 'plotter.plot2d.cticklabels': None, 'plotter.plot2d.ctickprops': {}, 'plotter.plot2d.cticks': None, 'plotter.plot2d.cticksize': 'medium', 'plotter.plot2d.ctickweight': None, 'plotter.plot2d.datagrid': None, 'plotter.plot2d.extend': 'neither', 'plotter.plot2d.interp_bounds': None, 'plotter.plot2d.levels': None, 'plotter.plot2d.mask_datagrid': True, 'plotter.plot2d.miss_color': None, 'plotter.plot2d.plot': 'mesh', 'plotter.plot2d.plot.min_circle_ratio': 0.05, 'plotter.simple.axiscolor': {'bottom': None, 'left': None, 'right': None, 'top': None}, 'plotter.simple.color': None, 'plotter.simple.grid': False, 'plotter.simple.labelprops': {'x': {}, 'y': {}}, 'plotter.simple.labelsize': {'x': 'medium', 'y': 'medium'}, 'plotter.simple.labelweight': {'x': None, 'y': None}, 'plotter.simple.legend': {'loc': 1}, 'plotter.simple.legendlabels': '%(arr_name)s', 'plotter.simple.sym_lims': [None, None], 'plotter.simple.ticksize': {'major': 'medium'}, 'plotter.simple.tickweight': {'major': None}, 'plotter.simple.transpose': False, 'plotter.simple.xlabel': '', 'plotter.simple.xlim': ('rounded', 'rounded'), 'plotter.simple.xrotation': 0.0, 'plotter.simple.xticklabels': {'major': None}, 'plotter.simple.xtickprops': {'major': {}, 'minor': {}}, 'plotter.simple.xticks': {'major': None, 'minor': None}, 'plotter.simple.ylabel': '', 'plotter.simple.ylim': ('rounded', 'rounded'), 'plotter.simple.yrotation': 0.0, 'plotter.simple.yticklabels': {'major': None}, 'plotter.simple.ytickprops': {'major': {}, 'minor': {}}, 'plotter.simple.yticks': {'major': None, 'minor': None}, 'plotter.user': {}, 'plotter.vector.arrowsize': None, 'plotter.vector.arrowstyle': '-|>', 'plotter.vector.color': 'k', 'plotter.vector.density': 1.0, 'plotter.vector.linewidth': None, 'plotter.vector.plot': 'quiver', 'plotter.violin.plot': True, 'presets.trusted': [], 'project.auto_import': False, 'project.import_seaborn': None, 'project.plotters': {'barplot': {'default_slice': None, 'module': 'psy_simple.plotters', 'plotter_name': 'BarPlotter', 'plugin': 'psy_simple.plugin', 'prefer_list': True, 'summary': 'Make a bar plot of one-dimensional data'}, 'combined': {'default_dims': {'x': slice(None, None, None), 'y': slice(None, None, None)}, 'default_slice': 0, 'example_call': "filename, name=[['my_variable', ['u_var', 'v_var']]], ...", 'module': 'psy_simple.plotters', 'plotter_name': 'CombinedSimplePlotter', 'plugin': 'psy_simple.plugin', 'prefer_list': True, 'summary': 'Plot a 2D scalar field with an overlying vector field'}, 'density': {'default_slice': None, 'module': 'psy_simple.plotters', 'plotter_name': 'DensityPlotter', 'plugin': 'psy_simple.plugin', 'prefer_list': False, 'summary': 'Make a density plot of point data'}, 'fldmean': {'default_slice': None, 'module': 'psy_simple.plotters', 'plotter_name': 'FldmeanPlotter', 'plugin': 'psy_simple.plugin', 'prefer_list': True, 'summary': 'Calculate and plot the mean over x- and y-dimensions'}, 'lineplot': {'default_slice': None, 'module': 'psy_simple.plotters', 'plotter_name': 'LinePlotter', 'plugin': 'psy_simple.plugin', 'prefer_list': True, 'summary': 'Make a line plot of one-dimensional data'}, 'plot2d': {'default_dims': {'x': slice(None, None, None), 'y': slice(None, None, None)}, 'default_slice': 0, 'module': 'psy_simple.plotters', 'plotter_name': 'Simple2DPlotter', 'plugin': 'psy_simple.plugin', 'prefer_list': False, 'summary': 'Make a simple plot of a 2D scalar field'}, 'simple': {'module': 'psy_simple.plotters', 'plot_func': False, 'plotter_name': 'SimplePlotterBase', 'plugin': 'psy_simple.plugin', 'summary': 'All plotters that are visualized by the psy-simple package'}, 'vector': {'default_dims': {'x': slice(None, None, None), 'y': slice(None, None, None)}, 'default_slice': 0, 'example_call': "filename, name=[['u_var', 'v_var']], ...", 'module': 'psy_simple.plotters', 'plotter_name': 'SimpleVectorPlotter', 'plugin': 'psy_simple.plugin', 'prefer_list': False, 'summary': 'Make a simple plot of a 2D vector field'}, 'violinplot': {'default_slice': None, 'module': 'psy_simple.plotters', 'plotter_name': 'ViolinPlotter', 'plugin': 'psy_simple.plugin', 'prefer_list': True, 'summary': 'Make a violin plot of your data'}}, 'project.plotters.user': {}, 'texts.default_position': [1.0, 1.0], 'texts.delimiter': ', ', 'texts.labels': {'desc': '%(long_name)s [%(units)s]', 'dinfo': '%B %d, %Y', 'dtinfo': '%B %d, %Y. %H:%M', 'sdesc': '%(name)s [%(units)s]', 'tinfo': '%H:%M'}, 'ticks.which': 'major', 'widgets.colors.cmaps': ['viridis', 'Reds', 'Blues', 'Greens', 'binary', 'RdBu', 'coolwarm', 'red_white_blue', 'winter', 'jet', 'white_blue_red', 'gist_ncar', 'gist_earth', 'Paired', 'gnuplot', 'gnuplot2']}
+

the rcParams to use (must be implemented by subclasses)

+
+ +
+
+title = 'psyplot defaults'
+

The title for the config page

+
+ +
+ +
+
+class psyplot_gui.preferences.RcParamsTree(rcParams, validators, descriptions, *args, **kwargs)[source]
+

Bases: QTreeWidget

+

A QTreeWidget that can be used to display a RcParams instance

+

This widget is populated by a psyplot.config.rcsetup.RcParams +instance and displays whether the values are valid or not

+

Methods:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + +

apply_changes()

Update the rc with the proposed changes

changed_rc([use_items])

Iterate over the changed rcParams

initialize()

Fill the items of the rc into the tree

open_menu(position)

Open a menu to expand and collapse all items in the tree

select_changes()

Select all the items that changed comparing to the current rcParams

selected_rc([use_items])

Iterate over the selected rcParams

set_icon_func(i, item, validator)

Create a function to change the icon of one topLevelItem

set_valid(i, b)

Set the validation status

+

Attributes:

+ + + + + + + + + + + + + + + + + + + + + + + + +

is_valid

True if all the proposed values in this tree are valid

propose_changes(*args, **kwargs)

A signal that is emitted if changes are propsed.

rc

The RcParams to display

top_level_items

An iterator over the topLevelItems in this tree

valid

list of bool.

validChanged(*args, **kwargs)

A signal that shall be emitted if the validation state changes

value_col

+
+
+apply_changes()[source]
+

Update the rc with the proposed changes

+
+ +
+
+changed_rc(use_items=False)[source]
+

Iterate over the changed rcParams

+
+
Parameters:
+

use_items (bool) – If True, the topLevelItems are used instead of the keys

+
+
Yields:
+
    +

  • QTreeWidgetItem or str – The item identifier

    • +

  • object – The proposed value

    • +
+
+
+
+ +
+
+initialize()[source]
+

Fill the items of the rc into the tree

+
+ +
+
+property is_valid
+

True if all the proposed values in this tree are valid

+
+ +
+
+open_menu(position)[source]
+

Open a menu to expand and collapse all items in the tree

+
+
Parameters:
+

position (QPosition) – The position where to open the menu

+
+
+
+ +
+
+propose_changes(*args, **kwargs)
+

A signal that is emitted if changes are propsed. It is either emitted +with the parent of this instance (if this is not None) or with the +instance itself

+
+ +
+
+rc = None
+

The RcParams to display

+
+ +
+
+select_changes()[source]
+

Select all the items that changed comparing to the current rcParams

+
+ +
+
+selected_rc(use_items=False)[source]
+

Iterate over the selected rcParams

+
+
Parameters:
+

use_items (bool) – If True, the topLevelItems are used instead of the keys

+
+
Yields:
+
    +

  • QTreeWidgetItem or str – The item identifier

    • +

  • object – The proposed value

    • +
+
+
+
+ +
+
+set_icon_func(i, item, validator)[source]
+

Create a function to change the icon of one topLevelItem

+

This method creates a function that can be called when the value of an +item changes to display it’s valid state. The returned function changes +the icon of the given topLevelItem depending on +whether the proposed changes are valid or not and it modifies the +valid attribute accordingly

+
+
Parameters:
+
    +

  • i (int) – The index of the topLevelItem

    • +

  • item (QTreeWidgetItem) – The topLevelItem

    • +

  • validator (func) – The validation function

    • +
+
+
Returns:
+

The function that can be called to set the correct icon

+
+
Return type:
+

function

+
+
+
+ +
+
+set_valid(i, b)[source]
+

Set the validation status

+

If the validation status changed compared to the old one, the +validChanged signal is emitted

+
+
Parameters:
+
    +

  • i (int) – The index of the topLevelItem

    • +

  • b (bool) – The valid state of the item

    • +
+
+
+
+ +
+
+property top_level_items
+

An iterator over the topLevelItems in this tree

+
+ +
+
+valid = []
+

list of bool. A boolean for each rcParams key that states +whether the proposed value is valid or not

+
+ +
+
+validChanged(*args, **kwargs)
+

A signal that shall be emitted if the validation state changes

+
+ +
+
+value_col = 2
+
+ +
+ +
+
+class psyplot_gui.preferences.RcParamsWidget(*args, **kwargs)[source]
+

Bases: ConfigPage, QWidget

+

A configuration page for RcParams instances

+

This page displays the psyplot.config.rcsetup.RcParams instance in +the rc attribute and let’s the user modify it.

+

Notes

+

After the initialization, you have to call the initialize() method

+

Methods:

+ + + + + + + + + + + + +

apply_changes()

Apply the changes in the config page

initialize([rcParams, validators, descriptions])

Initialize the config page

save_settings_action([update, target])

Create an action to save the selected settings in the tree

+

Attributes:

+ + + + + + + + + + + + + + + + + + + + + + + + +

changed

True if any changes are proposed by this config page

icon

The icon of this instance in the Preferences dialog

is_valid

True if all the settings are valid

propose_changes

A signal that is emitted if the user changes the values in the rcParams

rc

the rcParams to use (must be implemented by subclasses)

tree

the RcParamsTree that is used to display the rcParams

validChanged

A signal that is emitted if the user changes the valid state of this page

+
+
+apply_changes()[source]
+

Apply the changes in the config page

+
+ +
+
+property changed
+

True if any changes are proposed by this config page

+
+ +
+
+property icon
+

The icon of this instance in the Preferences dialog

+
+ +
+
+initialize(rcParams=None, validators=None, descriptions=None)[source]
+

Initialize the config page

+
+
Parameters:
+
    +

  • rcParams (dict) – The rcParams to use. If None, the rc attribute of this +instance is used

    • +

  • validators (dict) – A mapping from the rcParams key to the corresponding validation +function for the value. If None, the +validate attribute of the +rc attribute is used

    • +

  • descriptions (dict) – A mapping from the rcParams key to it’s description. If None, the +descriptions attribute of +the rc attribute is used

    • +
+
+
+
+ +
+
+property is_valid
+

True if all the settings are valid

+
+ +
+
+property propose_changes
+

A signal that is emitted if the user changes the values in the +rcParams

+
+ +
+
+rc = None
+

the rcParams to use (must be implemented by subclasses)

+
+ +
+
+save_settings_action(update=False, target=None)[source]
+

Create an action to save the selected settings in the tree

+
+
Parameters:
+

update (bool) – If True, it is expected that the file already exists and it will be +updated. Otherwise, existing files will be overwritten

+
+
+
+ +
+
+tree = None
+

the RcParamsTree that is used to display the rcParams

+
+ +
+
+property validChanged
+

A signal that is emitted if the user changes the valid state of this +page

+
+ +
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.sphinx_supp.conf.html b/api/psyplot_gui.sphinx_supp.conf.html new file mode 100644 index 0000000..03f3a29 --- /dev/null +++ b/api/psyplot_gui.sphinx_supp.conf.html @@ -0,0 +1,323 @@ + + + + + + + <no title> — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+ +
+
+ +

Functions:

+ + + + + + + + + +

link_aliases(app, what, name, obj, options, ...)

setup(app)

+
+ +
+ +
+
+psyplot_gui.sphinx_supp.conf.setup(app)[source]
+
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/api/psyplot_gui.sphinx_supp.html b/api/psyplot_gui.sphinx_supp.html new file mode 100644 index 0000000..3010995 --- /dev/null +++ b/api/psyplot_gui.sphinx_supp.html @@ -0,0 +1,314 @@ + + + + + + + psyplot_gui.sphinx_supp package — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

psyplot_gui.sphinx_supp package

+

Supplementary files for building the docs with sphinx.

+
+

Submodules

+
+ +
+
+
+ + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/changelog.html b/changelog.html new file mode 100644 index 0000000..58c6bd7 --- /dev/null +++ b/changelog.html @@ -0,0 +1,453 @@ + + + + + + + Changelog — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

Changelog

+
+

v1.5.0

+

Compatibility and bug fixes, cli improvements and code formatting

+
+

Changed

+
    +

  • migrate to psyplot-plugin-template !34

    • +

  • Update psyplot min version !38

    • +
+
+
+

Fixed

+
    +

  • fix updating current projects in console !35

    • +
+
+
+

Added

+
    +

  • implement decoder command-line argument !36

    • +
+
+
+
+

v1.4.0

+

Compatibility fixes and LGPL license

+

As with psyplot 1.4.0, psyplot-gui is now continuously tested and deployed with +CircleCI.

+
+

Added

+ +
+
+

Changed

+
    +

  • psyplot is now officially licensed under LGPL-3.0-only, +see #29

    • +

  • Documentation is now hosted with Github Pages at https://psyplot.github.io/psyplot-gui. +Redirects from the old documentation at https://psyplot-gui.readthedocs.io have been +configured.

    • +

  • We use CicleCI now for a standardized CI/CD pipeline to build and test +the code and docs all at one place, see #28

    • +
+
+
+
+

v1.3.0

+

Presets and more variable info

+
+

Changed

+ +
+
+

Added

+ +
+
+
+

v1.2.4

+

New release with better OpenGL support (see psyplot --help)

+
+
+

v1.2.3

+

Minor release without major API changes.

+
+
+

v1.2.2

+

From now one, python 2.7 is not supported anymore.

+
+

Added

+
    +

  • Added the possibility to change the central widget of the GUI

    • +

  • Added remove_plugin method for psyplot GUI plugins

    • +
+
+
+

Changed

+
    +

  • removed MacOS app folder in python dist

    • +
+
+
+
+

v1.2.1

+

monkey patch for ipykernel < 5.1.1 to fix +https://github.com/ipython/ipykernel/issues/370

+
+
+

v1.2.0

+
+

Changed

+
    +

  • The HTML help explorer now also shows a table of contents in the intro +and in the side bar to navigate to previously visited objects

    • +
+
+
+
+

v1.1.0

+

This release mainly adds the possibility to create plugins into the +psyplot-gui and it adds a new framework to allow the formatoptions to provide +a custom interface to the formatoptions widget.

+
+

Added

+
    +

  • Added layout windows menu and default layout

    • +

  • Added script and command command line arguments

    • +

  • The pwd command line arguments now changes the working directory of the +running GUI

    • +

  • Added callbacks to the MainWindow class. This framework can be used on a +low level to interact with the current GUI.

    • +

  • The DataFrameEditor. A widget to display dataframes

    • +

  • The implementation of the psyplot.plotter.Formatoption.get_fmt_widget +method. Formatoptions now can add a custom widget to the formatoptions widget

    • +
+
+
+
+

v1.0.1

+https://zenodo.org/badge/55793611.svg +
+

Added

+
    +

  • added changelog

    • +
+
+
+

Changed

+
    +

  • fixed bug that prevented startup on Windows

    • +
+
+
+
+ + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/ci/matrix/default/Pipfile b/ci/matrix/default/Pipfile deleted file mode 100644 index f4d75d4..0000000 --- a/ci/matrix/default/Pipfile +++ /dev/null @@ -1,25 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -[[source]] -url = "https://pypi.org/simple" -verify_ssl = true -name = "pypi" - -[packages] -psyplot-gui = {extras = ["testsite"], file = "../../.."} -psyplot = {ref = "develop", git = "git+https://codebase.helmholtz.cloud/psyplot/psyplot.git"} -psy-simple = {ref = "develop", git = "git+https://codebase.helmholtz.cloud/psyplot/psy-simple.git"} -PyQt5 = {version="*"} -PyQtWebEngine = {version="*"} -psyplot_gui_test = {path = "../../../tests/test_plugin/"} - - -[dev-packages] - -[pipenv] -allow_prereleases = true - -[requires] -python_version = "3.9" diff --git a/ci/matrix/mpl_35_py39/Pipfile b/ci/matrix/mpl_35_py39/Pipfile deleted file mode 100644 index c767abd..0000000 --- a/ci/matrix/mpl_35_py39/Pipfile +++ /dev/null @@ -1,25 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -[[source]] -url = "https://pypi.org/simple" -verify_ssl = true -name = "pypi" - -[packages] -psyplot-gui = {extras = ["testsite"], file = "../../.."} -psyplot = {ref = "develop", git = "git+https://codebase.helmholtz.cloud/psyplot/psyplot.git"} -psy-simple = {ref = "develop", git = "git+https://codebase.helmholtz.cloud/psyplot/psy-simple.git"} -PyQt5 = {version="*"} -PyQtWebEngine = {version="*"} -psyplot_gui_test = {path = "../../../tests/test_plugin/"} -matplotlib = "3.5.*" - -[dev-packages] - -[pipenv] -allow_prereleases = true - -[requires] -python_version = "3.9" diff --git a/ci/matrix/mpl_35_py39/Pipfile.lock b/ci/matrix/mpl_35_py39/Pipfile.lock deleted file mode 100644 index 804e38b..0000000 --- a/ci/matrix/mpl_35_py39/Pipfile.lock +++ /dev/null @@ -1,1960 +0,0 @@ -{ - "_meta": { - "hash": { - "sha256": "b1f1cfb05e3e6d6daad108b7f13aec64437a5acacdab9bf1e2cc7101c2ab0912" - }, - "pipfile-spec": 6, - "requires": { - "python_version": "3.9" - }, - "sources": [ - { - "name": "pypi", - 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+ + +
+ +
+
+
+ +
+
+
+
+ +
+

Command line usage

+

The psyplot-gui module extends the +command line usage of the psyplot module. You can open one (or more) files +in the graphical user interface simply via:

+
$ psyplot myfile.nc
+
+
+

By default, if the gui is already running, the file is opened in this gui +unless you specify the ni option.

+

+

Load a dataset, make the plot and save the result to a file

+
+

+
usage: psyplot [-h] [-V] [-aV] [-i] [-lp] [-lpm] [-lds] [-lps]
+               [-n [variable_name ...]] [-d dim,val1[,val2[,...]]
+               [dim,val1[,val2[,...]] ...]]
+               [-pm {'density', 'plot2d', 'fldmean', 'vector', 'combined', 'lineplot', 'barplot', 'violinplot'}]
+               [-o str or list of str] [-p str] [-engine str]
+               [-fmt FILENAME_OR_YAML] [-t] [-rc RC_FILE] [-e str]
+               [--enable-post] [-sns str] [-op str] [-cd str]
+               [-chname [project-variable,variable-to-use ...]] [-preset str]
+               [--decoder FILENAME_OR_YAML] [-b [backend]] [-ni]
+               [-rc-gui RC_GUI_FILE] [-inc str [str ...]] [-exc str [str ...]]
+               [--offline] [-pwd str] [-s str] [-c str] [-a]
+               [-opengl {'software', 'desktop', 'gles', 'automatic'}]
+               [--webengineview] [-lgp] [--no-webengineview]
+               [str ...]
+
+
+
+

Positional Arguments

+
+
str
+

Either the filenames to show, or, if the project parameter is set, +the a list of ,-separated filenames to make a mapping from the +original filename to a new one

+

Default: []

+
+
+
+
+

Named Arguments

+
+
-n, --name
+

The variable names to plot if the output parameter is set

+

Default: []

+
+
-d, --dims
+

A mapping from coordinate names to integers if the project is not +given

+
+
-pm, --plot-method
+

Possible choices: density, plot2d, fldmean, vector, combined, lineplot, barplot, violinplot

+

The name of the plot_method to use

+
+
-p, --project
+

If set, the project located at the given file name is loaded

+
+
-engine
+

The engine to use for opening the dataset (see +psyplot.data.open_dataset())

+
+
-fmt, --formatoptions
+
+

YAML-formatted formatoption (e.g. ‘cmap: Reds’), or the path to a yaml +('.yml' or '.yaml'), JSON ('.json') or pickle file +defining a dictionary of formatoption that is applied to the +data visualized by the chosen plot_method

+
+
+
-rc, --rc-file
+

The path to a yaml configuration file that can be used to update the +rcParams

+
+
-e, --encoding
+

The encoding to use for loading the project. If None, it is +automatically determined by pickle. Note: Set this to 'latin1' +if using a project created with python2 on python3.

+
+
--enable-post
+

Enable the post processing +formatoption. If True/set, post processing scripts are enabled in the +given project. Only set this if you are sure that you can trust the +given project file because it may be a security vulnerability.

+

Default: False

+
+
-sns, --seaborn-style
+

The name of the style of the seaborn package that can be used for +the seaborn.set_style() function

+
+
-cd, --concat-dim
+

The concatenation dimension if multiple files in fnames are +provided

+
+
-chname
+
+

A mapping from variable names in the project to variable names in the +datasets that should be used instead. Variable names should be +separated by a comma.

+
+

Default: {}

+
+
-preset
+

The filename or identifier of a preset. If the given preset is +the path to an existing yaml file, it will be loaded. Otherwise we +look up the preset in the psyplot configuration directory (see +get_configdir()).

+
+
--decoder
+
+

YAML-formatted decoder options (e.g. ‘x: x-coordinate’), or the path to +a yaml ('.yml' or '.yaml'), JSON ('.json') or pickle file +defining a dictionary of formatoption that is applied to the +data visualized by the chosen plot_method

+
+
+
-a, --use-all
+

If True, use all variables. Note that this is the default if the +output is specified and not name

+

Default: False

+
+
+
+
+

Info options

+

Options that print informations and quit afterwards

+
+
-V, --version
+

show program’s version number and exit

+
+
-aV, --all-versions
+

Print the versions of all plugins and requirements and exit

+
+
-i, --info
+

Show grid information on the specified variables.

+
+
-lp, --list-plugins
+

Print the names of the plugins and exit

+
+
-lpm, --list-plot-methods
+

List the available plot methods and what they do

+
+
-lds, --list-datasets
+

List the used dataset names in the given project.

+
+
-lps, --list-presets
+

Print available presets and exit

+
+
-lgp, --list-gui-plugins
+

Print the names of the GUI plugins and exit. Note that the displayed plugins are not affected by the include-plugins and exclude-plugins options

+
+
+
+
+

Output options

+

Options that only have an effect if the -o option is set.

+
+
-o, --output
+

If set, the data is loaded and the figures are saved to the specified +filename and now graphical user interface is shown

+
+
-t, --tight
+

If True/set, it is tried to figure out the tight bbox of the figure and +adjust the paper size of the output to it

+

Default: False

+
+
-op, --output-project
+

The name of a project file to save the project to. This option has only an effect if the output option is set.

+
+
+
+
+

Gui options

+

Options specific to the graphical user interface

+
+
-b, --backend
+
+

The backend to use. By default, the 'gui.backend' key in the +rcParams dictionary is used. If +used without options, the default matplotlib backend is used.

+
+

Default: False

+
+
-ni, --new-instance
+

If True/set and the output parameter is not set, a new application is +created

+

Default: False

+
+
-rc-gui, --rc-gui-file
+

The path to a yaml configuration file that can be used to update the +rcParams

+
+
-inc, --include-plugins
+

The plugin widget to include. Can be either None to load all that are +not explicitly excluded by exclude_plugins or a list of +plugins to include. List items can be either module names, plugin +names or the module name and widget via '<module_name>:<widget>'. Default: None

+
+
-exc, --exclude-plugins
+

The plugin widgets to exclude. Can be either 'all' to exclude +all plugins or a list like in include_plugins.. Default: []

+

Default: []

+
+
--offline
+

If True/set, psyplot will be started in offline mode without +intersphinx and remote access for the help explorer

+

Default: False

+
+
-pwd
+

The path to the working directory to use. Note if you do not provide +any fnames or project, but set the pwd, it will switch the +pwd of the current GUI.

+
+
-s, --script
+

The path to a python script that shall be run in the GUI. If the GUI +is already running, the commands will be executed in this GUI.

+
+
-c, --command
+

Python commands that shall be run in the GUI. If the GUI is already +running, the commands will be executed in this GUI

+
+
-opengl, --opengl-implementation
+

Possible choices: software, desktop, gles, automatic

+

OpenGL implementation to pass to Qt. Possible options are +‘software’, ‘desktop’, ‘gles’ and ‘automatic’ (which let’s PyQt +decide).

+
+
--webengineview
+

If True (default), use an HTML help widget. This might not be available +for all builds of PyQt5 under all circumstances. If not set, the +rcParams key 'help_explorer.use_webengineview' is used.

+
+
--no-webengineview
+

Do not use HTML rendering.

+
+
+
+

Examples

+

Here are some examples on how to use psyplot from the command line.

+

Plot the variable 't2m' in a netCDF file 'myfile.nc' and save +the plot to 'plot.pdf':

+
$ psyplot myfile.nc -n t2m -pm mapplot -o test.pdf
+
+
+

Create two plots for 't2m' with the first and second timestep on +the second vertical level:

+
$ psyplot myfile.nc -n t2m  -pm mapplot -o test.pdf -d t,0,1 z,1
+
+
+

If you have save a project using the +psyplot.project.Project.save_project() method into a file named +'project.pkl', you can replot this via:

+
$ psyplot -p project.pkl -o test.pdf
+
+
+

If you use a different dataset than the one you used in the project +(e.g. 'other_ds.nc'), you can replace it via:

+
$ psyplot other_dataset.nc -p project.pkl -o test.pdf
+
+
+

or explicitly via:

+
$ psyplot old_ds.nc,other_ds.nc -p project.pkl -o test.pdf
+
+
+

You can also load formatoptions from a configuration file, e.g.:

+
$ echo 'title: my title' > fmt.yaml
+$ psyplot myfile.nc -n t2m  -pm mapplot -fmt fmt.yaml -o test.pdf
+
+
+

If you omit the '-o' option, the file is opened in the graphical user +interface and if you run:

+
$ psyplot -pwd .
+
+
+

It will switch the directory of the already running GUI (if existent) to the +current working directory in your terminal. Additionally,:

+
$ psyplot -s myscript.py
+
+
+

will run the file 'myscript.py' in the GUI and:

+
$ psyplot -c 'print("Hello World!")'
+
+
+

will execute print("Hello World") in the GUI. The output, of the -s and +-c options, will, however, be shown in the terminal.

+

+
+ + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/configuration.html b/configuration.html new file mode 100644 index 0000000..b02b2a9 --- /dev/null +++ b/configuration.html @@ -0,0 +1,364 @@ + + + + + + + Configuration of the GUI — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

Configuration of the GUI

+

As psyplot is configured by the psyplot.config.rcsetup.rcParams, +psyplot-gui is configured by the psyplot_gui.config.rcsetup.rcParams +dictionary.

+

Both dictionaries can also be modified through the Preferences +widget (on MacOS, Command+,, on Windows and Linux: +Help ‣ Preferences).

+

As for psyplot, the rcParams are stored in the psyplot configuration +directory, which is, under Linux and OSX by default, located at +$HOME/.config/psyplot/psyplotguirc.yml and under Windows at +$HOME/.psyplot/psyplotguirc.yml. +This file might look like

+
In [1]: from psyplot_gui import rcParams
+
+In [2]: print(rcParams.dump())
+# Configuration parameters of the psyplot module
+# 
+# You can copy this file (or parts of it) to another path and save it as
+# psyplotguirc.yml. The directory should then be stored in the PSYPLOTCONFIGDIR
+# environment variable.
+# 
+# psyplot gui version: 1.5.0
+# 
+# Created with python
+# 
+# 3.9.19 (main, Mar 20 2024, 20:37:44) 
+# [GCC 12.2.0]
+# 
+# 
+# Backend to use when using the graphical user interface. The current backend is used and no changes are made. Note that it is usually not possible to change the backend after importing the psyplot.project module. The default backend embeds the figures into the 
+backend: psyplot
+# If True, then the 'mp' variable in the console is automatically set when the current main project changes
+console.auto_set_mp: true
+# If True, then the 'sp' variable in the console is automatically set when the current sub project changes
+console.auto_set_sp: true
+# Whether the console shall be connected to the help_explorer or not
+console.connect_to_help: true
+# Start the different channels of the KernelClient
+console.start_channels: true
+# If True, a lazy load is performed on the arrays and data sets and their string representation is displayed as tool tip. This part of the data into memory. It is recommended to set this to False for remote data.
+content.load_tooltips: true
+# If True, the formatoptions in the Formatoptions widget are sorted by their formatoption key rather than by their name.
+fmt.sort_by_key: true
+# Switch that controls whether the online functions of the help explorer shall be enabled. False implies that help_explorer.use_intersphinx is set to False
+help_explorer.online: null
+# Boolean whether the html docs are rendered in a separate process
+help_explorer.render_docs_parallel: true
+# Use the intersphinx extension and link to the online documentations of matplotlib, pyplot, psyplot, numpy, etc. when converting rst docstrings. The inventories are loaded when the first object is documented. If None, intersphinx is only used when `help_explorer.online` is True and you are not using windows
+help_explorer.use_intersphinx: null
+# Enable the PyQt5.QtWebEngineWidgets.QWebEngineView which might not work under certain circumstances.
+help_explorer.use_webengineview: true
+# If True and the psyplot gui is already running, new files are opened in that gui
+main.listen_to_port: true
+# The port number used when new files are opened
+main.open_files_port: 30124
+# The opengl implementation to use. Should be one of 'software', 'desktop', 'gles' or 'automatic'.
+main.opengl: software
+# The plugins to exclude from loading. Can be either 'all' to exclude all plugins or a list like in 'plugins.include'.
+plugins.exclude: []
+# The plugins to load. Can be either None to load all that are not explicitly excluded by the 'plugins.exclude' key or a list of plugins to include. List items can be either module names, plugin names or the module name and widget via '<module_name>:<widget>'
+plugins.include: null
+
+
+
+ + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/contributing.html b/contributing.html new file mode 100644 index 0000000..2449796 --- /dev/null +++ b/contributing.html @@ -0,0 +1,303 @@ + + + + + + + Contribution and development hints — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

Contribution and development hints

+

See psyplots contribution guidelines.

+
+ + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/docs/Makefile b/docs/Makefile deleted file mode 100644 index b1567a1..0000000 --- a/docs/Makefile +++ /dev/null @@ -1,24 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -# Minimal makefile for Sphinx documentation -# - -# You can set these variables from the command line, and also -# from the environment for the first two. -SPHINXOPTS ?= -SPHINXBUILD ?= sphinx-build -SOURCEDIR = . -BUILDDIR = _build - -# Put it first so that "make" without argument is like "make help". -help: - @$(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) - -.PHONY: help Makefile - -# Catch-all target: route all unknown targets to Sphinx using the new -# "make mode" option. $(O) is meant as a shortcut for $(SPHINXOPTS). -%: Makefile - @$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) diff --git a/docs/_templates/footer.html b/docs/_templates/footer.html deleted file mode 100644 index 3e57079..0000000 --- a/docs/_templates/footer.html +++ /dev/null @@ -1,22 +0,0 @@ - - -{% extends "!footer.html" %} -{% block extrafooter %} - -
- - - Creative Commons License - - This documentation is licensed under - - CC-BY-4.0 - - -
- -{% endblock %} diff --git a/docs/conf.py b/docs/conf.py deleted file mode 100644 index f6e49ef..0000000 --- a/docs/conf.py +++ /dev/null @@ -1,144 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -# Configuration file for the Sphinx documentation builder. -# -# This file only contains a selection of the most common options. For a full -# list see the documentation: -# https://www.sphinx-doc.org/en/master/usage/configuration.html - -# -- Path setup -------------------------------------------------------------- - -# If extensions (or modules to document with autodoc) are in another directory, -# add these directories to sys.path here. If the directory is relative to the -# documentation root, use os.path.abspath to make it absolute, like shown here. -# -import os -import sys -from itertools import product -from pathlib import Path - -from sphinx.ext import apidoc - -sys.path.insert(0, os.path.abspath("..")) - -if not os.path.exists("_static"): - os.makedirs("_static") - -# isort: off - -import psyplot_gui - -# isort: on - - -def generate_apidoc(app): - appdir = Path(app.__file__).parent - apidoc.main( - ["-fMEeTo", str(api), str(appdir), str(appdir / "migrations" / "*")] - ) - - -api = Path("api") - -if not api.exists(): - generate_apidoc(psyplot_gui) - -# -- Project information ----------------------------------------------------- - -project = "psyplot-gui" -copyright = "2021-2024 Helmholtz-Zentrum hereon GmbH" -author = "Philipp S. Sommer" - - -linkcheck_ignore = [ - # we do not check link of the psyplot-gui as the - # badges might not yet work everywhere. Once psyplot-gui - # is settled, the following link should be removed - r"https://.*psyplot-gui" -] - - -# -- General configuration --------------------------------------------------- - -# Add any Sphinx extension module names here, as strings. They can be -# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom -# ones. -extensions = [ - "hereon_nc_sphinxext", - "sphinx.ext.intersphinx", - "sphinx_design", - "sphinx.ext.todo", - "sphinx.ext.viewcode", - "autodocsumm", - "sphinx.ext.autodoc", - "sphinx.ext.autosummary", - "matplotlib.sphinxext.plot_directive", - "IPython.sphinxext.ipython_console_highlighting", - "IPython.sphinxext.ipython_directive", - "sphinxarg.ext", - "psyplot.sphinxext.extended_napoleon", -] - - -# Add any paths that contain templates here, relative to this directory. -templates_path = ["_templates"] - -# List of patterns, relative to source directory, that match files and -# directories to ignore when looking for source files. -# This pattern also affects html_static_path and html_extra_path. -exclude_patterns = ["_build", "Thumbs.db", ".DS_Store"] - - -autodoc_default_options = { - "show_inheritance": True, - "members": True, - "autosummary": True, -} - - -# -- Options for HTML output ------------------------------------------------- - -# The theme to use for HTML and HTML Help pages. See the documentation for -# a list of builtin themes. -html_theme = "sphinx_rtd_theme" - -html_theme_options = { - "collapse_navigation": False, - "includehidden": False, -} - -# Add any paths that contain custom static files (such as style sheets) here, -# relative to this directory. They are copied after the builtin static files, -# so a file named "default.css" will overwrite the builtin "default.css". -html_static_path = ["_static"] - - -intersphinx_mapping = { - "python": ("https://docs.python.org/3/", None), - "matplotlib": ("https://matplotlib.org/stable/", None), - "sphinx": ("https://www.sphinx-doc.org/en/stable/", None), - "xarray": ("https://xarray.pydata.org/en/stable/", None), - "cartopy": ("https://scitools.org.uk/cartopy/docs/latest/", None), - "psyplot": ("https://psyplot.github.io/psyplot/", None), -} - -replacements = { - "`psyplot.rcParams`": "`~psyplot.config.rcsetup.rcParams`", - "`psyplot.InteractiveList`": "`~psyplot.data.InteractiveList`", - "`psyplot.InteractiveArray`": "`~psyplot.data.InteractiveArray`", - "`psyplot.open_dataset`": "`~psyplot.data.open_dataset`", - "`psyplot.open_mfdataset`": "`~psyplot.data.open_mfdataset`", -} - - -def link_aliases(app, what, name, obj, options, lines): - for (key, val), (i, line) in product( - replacements.items(), enumerate(lines) - ): - lines[i] = line.replace(key, val) - - -def setup(app): - app.connect("autodoc-process-docstring", link_aliases) diff --git a/docs/explained_screenshot.pdf b/docs/explained_screenshot.pdf deleted file mode 100644 index 86a5da0..0000000 Binary files a/docs/explained_screenshot.pdf and /dev/null differ diff --git a/docs/explained_screenshot.pdf.license b/docs/explained_screenshot.pdf.license deleted file mode 100644 index b21fae9..0000000 --- a/docs/explained_screenshot.pdf.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/docs/explained_screenshot.png.license b/docs/explained_screenshot.png.license deleted file mode 100644 index b21fae9..0000000 --- a/docs/explained_screenshot.png.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/docs/ipython_console.png.license b/docs/ipython_console.png.license deleted file mode 100644 index b21fae9..0000000 --- a/docs/ipython_console.png.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/docs/make.bat b/docs/make.bat deleted file mode 100644 index 2e7d9b0..0000000 --- a/docs/make.bat +++ /dev/null @@ -1,39 +0,0 @@ -REM SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -REM -REM SPDX-License-Identifier: CC0-1.0 - -@ECHO OFF - -pushd %~dp0 - -REM Command file for Sphinx documentation - -if "%SPHINXBUILD%" == "" ( - set SPHINXBUILD=sphinx-build -) -set SOURCEDIR=. -set BUILDDIR=_build - -if "%1" == "" goto help - -%SPHINXBUILD% >NUL 2>NUL -if errorlevel 9009 ( - echo. - echo.The 'sphinx-build' command was not found. Make sure you have Sphinx - echo.installed, then set the SPHINXBUILD environment variable to point - echo.to the full path of the 'sphinx-build' executable. Alternatively you - echo.may add the Sphinx directory to PATH. - echo. - echo.If you don't have Sphinx installed, grab it from - echo.http://sphinx-doc.org/ - exit /b 1 -) - -%SPHINXBUILD% -M %1 %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O% -goto end - -:help -%SPHINXBUILD% -M help %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O% - -:end -popd diff --git a/docs/requirements.txt b/docs/requirements.txt deleted file mode 100644 index 6aabf6d..0000000 --- a/docs/requirements.txt +++ /dev/null @@ -1,8 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -sphinx-design -git+https://codebase.helmholtz.cloud/hcdc/hereon-netcdf/sphinxext.git -git+https://codebase.helmholtz.cloud/psyplot/psyplot.git@develop -git+https://codebase.helmholtz.cloud/psyplot/psy-simple.git@develop diff --git a/docs/world.png.license b/docs/world.png.license deleted file mode 100644 index b21fae9..0000000 --- a/docs/world.png.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/genindex.html b/genindex.html new file mode 100644 index 0000000..3d92a41 --- /dev/null +++ b/genindex.html @@ -0,0 +1,1876 @@ + + + + + + Index — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+
    +
    • +
  • Index
    • +
  • +
    • +
+
+
+
+
+ + +

Index

+ +
+ A + | B + | C + | D + | E + | F + | G + | H + | I + | K + | L + | M + | N + | O + | P + | R + | S + | T + | U + | V + | W + +
+

A

+ + + +
+ +

B

+ + + +
+ +

C

+ + + +
+ +

D

+ + + +
+ +

E

+ + + +
+ +

F

+ + + +
+ +

G

+ + + +
+ +

H

+ + + +
+ +

I

+ + + +
+ +

K

+ + +
+ +

L

+ + + +
+ +

M

+ + + +
+ +

N

+ + + +
+ +

O

+ + + +
+ +

P

+ + + +
+ +

R

+ + + +
+ +

S

+ + + +
+ +

T

+ + + +
+ +

U

+ + + +
+ +

V

+ + + +
+ +

W

+ + + +
+ + + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/getting_started.html b/getting_started.html new file mode 100644 index 0000000..d51bc92 --- /dev/null +++ b/getting_started.html @@ -0,0 +1,440 @@ + + + + + + + Getting started — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

Getting started

+_images/explained_screenshot.png +

The Screenshot above shows you the essential parts of the GUI:

+ +
+

Starting the GUI

+

Starting the GUI is straight forward but depends on how you installed it. If +you installed it via conda or pip, just open a terminal (or Command Window +cmd on Windows) and type psyplot.

+
+
+

The Console

+

The central widget in the GUI is an in-process IPython console that provides +the possibility to communicate with the psyplot package via the command line +and to load any other module or to run any other script.

+

It is based on the qtconsole module and it is, by default, connected to the +help explorer. If you type, for example,

+
np.sum(
+
+
+

it will show you the documentation of the numpy.sum() module in the +help explorer. The same comes, if you type:

+
np.sum?
+
+
+

This feature is motivated from the Spyder editor and can be disabled via +the rcParams key console.connect_to_help (see Configuration of the GUI) or the +little ipython_console symbol at the top of the help explorer.

+

Furthermore, is connected to the current psyplot project (see +psyplot.project.scp() and psyplot.project.gcp()). Those are

+
+
sp

This variable links to the current subproject (psy.gcp())

+
+
mp

This variable links to the current main project (psy.gcp(True))

+
+
+

The following example, which you can just copy and paste in the console of the +GUI, illustrates this:

+
# in the beginning, sp and mp are empty
+In [1]: print(sp)
+   ...: print(mp)
+   ...: 
+psyplot.project.Project([
+])
+1 Main psyplot.project.Project([
+])
+
+In [2]: psy.plot.lineplot(xr.DataArray([1, 2, 3], name='test').to_dataset())
+Out[2]: psyplot.project.Project([arr0: psyplot.data.InteractiveList([    arr0: 1-dim DataArray of test, with (dim_0)=(3,), ])])
+
+# now they both contain this data
+In [3]: print(sp)
+   ...: print(mp)
+   ...: 
+psyplot.project.Project([arr0: psyplot.data.InteractiveList([    arr0: 1-dim DataArray of test, with (dim_0)=(3,), ])])
+1 Main psyplot.project.Project([arr0: psyplot.data.InteractiveList([    arr0: 1-dim DataArray of test, with (dim_0)=(3,), ])])
+
+# lets create a second one
+In [4]: psy.plot.lineplot(xr.DataArray([1, 2, 3], name='test2').to_dataset())
+Out[4]: psyplot.project.Project([arr1: psyplot.data.InteractiveList([    arr0: 1-dim DataArray of test2, with (dim_0)=(3,), ])])
+
+# sp now only contains the new one, mp contains both
+In [5]: print(sp)
+   ...: print(mp)
+   ...: 
+psyplot.project.Project([arr1: psyplot.data.InteractiveList([    arr0: 1-dim DataArray of test2, with (dim_0)=(3,), ])])
+1 Main psyplot.project.Project([
+    arr0: psyplot.data.InteractiveList([        arr0: 1-dim DataArray of test, with (dim_0)=(3,), ]),
+    arr1: psyplot.data.InteractiveList([        arr0: 1-dim DataArray of test2, with (dim_0)=(3,), ])])
+
+
+

If you do not wish this behaviour, set the console.auto_set_mp and +console.auto_set_sp rcParams to False.

+
+
+

The Help Explorer

+

The help explorer provides you access to python objects and online information. +It can be used as a webbrowser if the world icon is not clicked or the +help_explorer.online rcParams key is True (see Configuration of the GUI).

+

It is motivated by the Help of the Spyder editor and uses Sphinx to +automatically render python documentation written in restructured Text.

+

By default, the help explorer uses the intersphinx extension to link to +different online libraries. This however always consumes time at the startup +and can be disabled by the help_explorer.use_intersphinx rcParams key.

+

It is also connected to the information functions of psyplot, e.g. the +psyplot.plotter.Plotter.show_keys() function. For example

+
In [6]: psy.plot.lineplot.keys()
++----------------+----------------+----------------+----------------+
+| axiscolor      | background     | color          | coord          |
++----------------+----------------+----------------+----------------+
+| error          | erroralpha     | figtitle       | figtitleprops  |
++----------------+----------------+----------------+----------------+
+| figtitlesize   | figtitleweight | grid           | labelprops     |
++----------------+----------------+----------------+----------------+
+| labelsize      | labelweight    | legend         | legendlabels   |
++----------------+----------------+----------------+----------------+
+| linewidth      | marker         | markersize     | mask           |
++----------------+----------------+----------------+----------------+
+| maskbetween    | maskgeq        | maskgreater    | maskleq        |
++----------------+----------------+----------------+----------------+
+| maskless       | plot           | post           | post_timing    |
++----------------+----------------+----------------+----------------+
+| sym_lims       | text           | ticksize       | tickweight     |
++----------------+----------------+----------------+----------------+
+| tight          | title          | titleprops     | titlesize      |
++----------------+----------------+----------------+----------------+
+| titleweight    | transpose      | xlabel         | xlim           |
++----------------+----------------+----------------+----------------+
+| xrotation      | xticklabels    | xtickprops     | xticks         |
++----------------+----------------+----------------+----------------+
+| ylabel         | ylim           | yrotation      | yticklabels    |
++----------------+----------------+----------------+----------------+
+| ytickprops     | yticks         |                |                |
++----------------+----------------+----------------+----------------+
+
+
+

would be converted to HTML and shown in the help explorer.

+
+
+

The Plot Creator

+

The plot creator is used to create new plots from a xarray.Dataset. +You can open it via File ‣ New Plot.

+
+
+

The Project content

+

The project content shows you the current project (see +psyplot.project.gcp()). The selected arrays are the current subproject.

+
+
+

The formatoptions widget

+

The formatoption widget can be used to update the formatoptions of the current +subproject or to show their help.

+
+
+ + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/index.html b/index.html new file mode 100644 index 0000000..df0e366 --- /dev/null +++ b/index.html @@ -0,0 +1,502 @@ + + + + + + + Welcome to psyplot-gui’s documentation! — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

Welcome to psyplot-gui’s documentation!

+

CI +Code coverage +Latest Release +PyPI version +Code style: black +Imports: isort +PEP8 +REUSE status

+

Graphical user interface for the psyplot package

+

Welcome! This package enhances the interactive visualization framework +psyplot with a graphical user interface using PyQt. See the homepage of the +main project on examples on the possibilities with psyplot.

+
+ +
+
+

How to cite this software

+
+
+
+Please do cite this software!
+
+ +
+

Sommer P.S. psyplot-gui: Graphical user interface for the psyplot package DOI: 10.5281/zenodo.845725 URL: https://github.com/psyplot/psyplot
+
+
+

+
+ +
+

@misc{YourReferenceHere,
+author = {Sommer, Philipp S.},
+doi = {10.5281/zenodo.845725},
+title = {psyplot-gui: Graphical user interface for the psyplot package},
+url = {https://github.com/psyplot/psyplot}
+}
+
+
+

+
+ +
+

TY  - GEN
+AU  - Sommer, Philipp S.
+DO  - 10.5281/zenodo.845725
+KW  - psyplot
+KW  - python
+KW  - visualization
+KW  - xarray
+KW  - matplotlib
+KW  - netcdf4
+KW  - interactive
+KW  - climate models
+KW  - unstructured
+KW  - earth-sciences
+KW  - pyqt
+KW  - qt
+KW  - ipython
+KW  - jupyter
+KW  - qtconsole
+KW  - raster
+KW  - cartopy
+TI  - psyplot-gui: Graphical user interface for the psyplot package
+UR  - https://github.com/psyplot/psyplot
+ER
+
+
+

+
+ +
+

%0 Generic
+%A Sommer, Philipp S.
+%K psyplot
+%K python
+%K visualization
+%K xarray
+%K matplotlib
+%K netcdf4
+%K interactive
+%K climate models
+%K unstructured
+%K earth-sciences
+%K pyqt
+%K qt
+%K ipython
+%K jupyter
+%K qtconsole
+%K raster
+%K cartopy
+%R 10.5281/zenodo.845725
+%T psyplot-gui: Graphical user interface for the psyplot package
+%U https://github.com/psyplot/psyplot
+
+
+

+
+ +
+

# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
+#
+# SPDX-License-Identifier: CC0-1.0
+
+# YAML 1.2
+---
+cff-version: "1.2.0"
+message: "If you use this software, please cite both the article from preferred-citation and the software itself."
+title: "psyplot-gui: Graphical user interface for the psyplot package"
+authors:
+  - family-names: Sommer
+    given-names: "Philipp S."
+    affiliation: "Helmholtz-Zentrum Hereon"
+    orcid: "https://orcid.org/0000-0001-6171-7716"
+    website: "https://www.philipp-s-sommer.de"
+    post-code: 21502
+    city: Geesthacht
+    country: DE
+    email: philipp.sommer@hereon.de
+doi: "10.5281/zenodo.845725"
+contact:
+  - email: psyplot@hereon.de
+    name: "Psyplot developers at hereon"
+license: "LGPL-3.0-only"
+repository-code: https://github.com/psyplot/psyplot
+type: software
+keywords:
+  - psyplot
+  - python
+  - visualization
+  - xarray
+  - matplotlib
+  - netcdf4
+  - interactive
+  - climate models
+  - unstructured
+  - earth-sciences
+  - pyqt
+  - qt
+  - ipython
+  - jupyter
+  - qtconsole
+  - raster
+  - cartopy
+preferred-citation:
+  title: "The psyplot interactive visualization framework"
+  authors:
+    - family-names: Sommer
+      given-names: "Philipp S."
+      affiliation: "Helmholtz-Zentrum Hereon"
+      orcid: "https://orcid.org/0000-0001-6171-7716"
+  year: 2017
+  type: article
+  doi: "10.21105/joss.00363"
+  date-published: 2017-08-22
+  journal: Journal of Open Source Software
+  volume: 2
+  number: 16
+  pages: 363
+  publisher:
+    name: The Open Journal
+  license: CC-BY-4.0
+...
+
+
+

+
+
+
+
+
+
+

License information

+

Copyright © 2021-2024 Helmholtz-Zentrum hereon GmbH

+

The source code of psyplot-gui is licensed under +LGPL-3.0-only.

+

If not stated otherwise, the contents of this documentation is licensed under +CC-BY-4.0.

+
+
+
+

Indices and tables

+ +
+ + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/installing.html b/installing.html new file mode 100644 index 0000000..85ffdbd --- /dev/null +++ b/installing.html @@ -0,0 +1,341 @@ + + + + + + + Installation — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

Installation

+

This package requires the psyplot package which is installed alongside if you +use conda or pip. However see the psyplot documentation for further +informations.

+
+

How to install

+
+

Installation using conda

+

We highly recommend to use conda for installing psyplot-gui.

+

You can then install psyplot-gui simply via:

+
$ conda install -c conda-forge psyplot-gui
+
+
+
+
+

Installation using pip

+

If you do not want to use conda for managing your python packages, you can also +use the python package manager pip and install via:

+
$ pip install psyplot-gui
+
+
+
+
+
+

Dependencies

+
+

Required dependencies

+

Psyplot has been tested for python 2.7 and >=3.7. Furthermore the package is +built upon multiple other packages, namely

+
    +

  • psyplot>=1.4: The underlying framework for data visualization

    • +

  • qtconsole>=4.1.1: A package providing the necessary objects for running +an inprocess ipython console in a Qt widget

    • +

  • fasteners: Which provides an inprocess lock to communicate to the psyplot +mainwindow

    • +

  • PyQt5: Python bindings to the Qt software

    • +

  • sphinx>=1.3.5: To use all features of the interactive documentation access

    • +
+
+
+
+ + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/objects.inv b/objects.inv new file mode 100644 index 0000000..3d80291 Binary files /dev/null and b/objects.inv differ diff --git a/plugins.html b/plugins.html new file mode 100644 index 0000000..9506a42 --- /dev/null +++ b/plugins.html @@ -0,0 +1,353 @@ + + + + + + + Plugin configuration — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

Plugin configuration

+

The psyplot GUI has several built-in plugins, e.g. the +help_explorer or the fmt_widget. +External libraries can add plugins and the user can +disable or enable them with through the configuration.

+
+

Note

+

These plugins should only affect the GUI. For other plugins that define +new plotmethods, etc., see the +psyplot documentation

+
+
+

Plugin configuration

+

You can include and exclude plugins either through the include-plugins and +exclude-plugins command line option (see Command line usage), or you +do it permanently with the rcParams (see +Configuration of the GUI).

+
+
+

Developing plugins

+

External libraries insert the GUI as an entry point. In the setup.py +script of a package, include the following:

+
setup(
+    ...,
+    entry_points={
+        "psyplot_gui": [
+            "widget-name1=widget-module1:widget-class-name1",
+            "widget-name2=widget-module2:widget-class-name2",
+            ...,
+        ],
+    },
+    ...,
+)
+
+
+

Here, widget-name1 is an arbitrary name you want to assign to the widget, +widget-module1 is the module from where to import the plugin, and +widget-class-name1 is the name of the class that inherits the +psyplot_gui.common.DockMixin class.

+

For the help_explorer, this, for example, would like like

+
setup(
+    ...,
+    entry_points={
+        "psyplot_gui": [
+            "help=psyplot_gui.help_explorer:HelpExplorer",
+        ],
+    },
+    ...,
+)
+
+
+
+
+ + +
+
+ + + +
+
+
+
+ + + + \ No newline at end of file diff --git a/psyplot_gui/__init__.py b/psyplot_gui/__init__.py deleted file mode 100644 index f538fb1..0000000 --- a/psyplot_gui/__init__.py +++ /dev/null @@ -1,597 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -"""psyplot-gui - -Graphical user interface for the psyplot package -""" - -from __future__ import annotations - -import argparse -import atexit -import datetime as dt -import logging -import os -import os.path as osp -import pickle -import socket -import sys -import tempfile -import time -from itertools import chain - -import fasteners -import psyplot -import six -import xarray as xr -import yaml -from psyplot.__main__ import make_plot -from psyplot.config.rcsetup import get_configdir, safe_list -from psyplot.docstring import docstrings -from psyplot.utils import get_default_value -from psyplot.warning import warn - -import psyplot_gui.config as config -from psyplot_gui.config.rcsetup import rcParams - -from . import _version - -__version__ = _version.get_versions()["version"] - -__author__ = "Philipp S. Sommer" -__copyright__ = "2021-2024 Helmholtz-Zentrum hereon GmbH" -__credits__ = [ - "Philipp S. Sommer", -] -__license__ = "LGPL-3.0-only" - -__maintainer__ = "Philipp S. Sommer" -__email__ = "philipp.sommer@hereon.de" - -__status__ = "Production" - -logger = logging.getLogger(__name__) -logger.debug( - "%s: Initializing psyplot gui, version %s", - dt.datetime.now().isoformat(), - __version__, -) -logger.debug("psyplot version: %s", psyplot.__version__) -logger.debug("Logging configuration file: %s", config.logcfg_path) -logger.debug("Configuration file: %s", config.config_path) - - -rcParams.HEADER += "\n\npsyplot gui version: " + __version__ - - -logger = logging.getLogger(__name__) - - -def get_versions(requirements=True): - ret = {"version": __version__} - if requirements: - req = ret["requirements"] = {} - try: - import qtconsole - except Exception: - logger.error("Could not load qtconsole!", exc_info=True) - else: - req["qtconsole"] = qtconsole.__version__ - try: - from psyplot_gui.compat.qtcompat import PYQT_VERSION, QT_VERSION - except Exception: - logger.error("Could not load qt and pyqt!", exc_info=True) - else: - req["qt"] = QT_VERSION - req["pyqt"] = PYQT_VERSION - return ret - - -@docstrings.get_sections(base="psyplot_gui.start_app") -@docstrings.dedent -def start_app( - fnames=[], - name=[], - dims=None, - plot_method=None, - output=None, - project=None, - engine=None, - formatoptions=None, - tight=False, - encoding=None, - enable_post=False, - seaborn_style=None, - output_project=None, - concat_dim=get_default_value(xr.open_mfdataset, "concat_dim"), - chname={}, - backend=False, - new_instance=False, - rc_file=None, - rc_gui_file=None, - include_plugins=rcParams["plugins.include"], - exclude_plugins=rcParams["plugins.exclude"], - offline=False, - pwd=None, - script=None, - command=None, - exec_=True, - use_all=False, - callback=None, - preset=None, - opengl_implementation=None, - webengineview=True, - decoder=None, -): - """ - Eventually start the QApplication or only make a plot - - Parameters - ---------- - %(make_plot.parameters)s - backend: None or str - The backend to use. By default, the ``'gui.backend'`` key in the - :attr:`~psyplot_gui.config.rcsetup.rcParams` dictionary is used. - Otherwise it can be None to use the standard matplotlib backend or a - string identifying the backend - new_instance: bool - If True/set and the `output` parameter is not set, a new application is - created - rc_gui_file: str - The path to a yaml configuration file that can be used to update the - :attr:`~psyplot_gui.config.rcsetup.rcParams` - include_plugins: list of str - The plugin widget to include. Can be either None to load all that are - not explicitly excluded by `exclude_plugins` or a list of - plugins to include. List items can be either module names, plugin - names or the module name and widget via ``':'`` - exclude_plugins: list of str - The plugin widgets to exclude. Can be either ``'all'`` to exclude - all plugins or a list like in `include_plugins`. - offline: bool - If True/set, psyplot will be started in offline mode without - intersphinx and remote access for the help explorer - pwd: str - The path to the working directory to use. Note if you do not provide - any `fnames` or `project`, but set the `pwd`, it will switch the - `pwd` of the current GUI. - script: str - The path to a python script that shall be run in the GUI. If the GUI - is already running, the commands will be executed in this GUI. - command: str - Python commands that shall be run in the GUI. If the GUI is already - running, the commands will be executed in this GUI - use_all: bool - If True, use all variables. Note that this is the default if the - `output` is specified and not `name` - exec_: bool - If True, the main loop is entered. - callback: str - A unique identifier for the method that should be used if psyplot is - already running. Set this parameter to None to avoid sending - opengl_implementation: {'software', 'desktop', 'gles', 'automatic'} - OpenGL implementation to pass to Qt. Possible options are - 'software', 'desktop', 'gles' and 'automatic' (which let's PyQt - decide). - webengineview: bool - If True (default), use an HTML help widget. This might not be available - for all builds of PyQt5 under all circumstances. If not set, the - rcParams key ``'help_explorer.use_webengineview'`` is used. - - Returns - ------- - None or :class:`psyplot_gui.main.MainWindow` - ``None`` if `exec_` is True, otherwise the created - :class:`~psyplot_gui.main.MainWindow` instance - """ - if pwd is not None: - os.chdir(pwd) - if script is not None: - script = osp.abspath(script) - - if project is not None and (name != [] or dims is not None): - warn( - "The `name` and `dims` parameter are ignored if the `project`" - " parameter is set!" - ) - - # load rcParams from file - if rc_gui_file is not None: - rcParams.load_from_file(rc_gui_file) - - # set plugins - rcParams["plugins.include"] = include_plugins - rcParams["plugins.exclude"] = exclude_plugins - if webengineview is not None: - rcParams["help_explorer.use_webengineview"] = webengineview - - if offline: - rcParams["help_explorer.online"] = False - rcParams["help_explorer.use_intersphinx"] = False - - if dims is not None and not isinstance(dims, dict): - dims = dict(chain(*map(six.iteritems, dims))) - - if output is not None: - return make_plot( - fnames=fnames, - name=name, - dims=dims, - plot_method=plot_method, - output=output, - project=project, - engine=engine, - formatoptions=formatoptions, - tight=tight, - rc_file=rc_file, - encoding=encoding, - enable_post=enable_post, - seaborn_style=seaborn_style, - output_project=output_project, - concat_dim=concat_dim, - chname=chname, - preset=preset, - decoder=decoder, - ) - if use_all: - name = "all" - else: - name = safe_list(name) - - if formatoptions is not None: - if not isinstance(formatoptions, dict): - # list of dicts - for fmt in formatoptions[1:]: - formatoptions[0].update(fmt) - formatoptions = formatoptions[0] - if preset is not None: - import psyplot.project as psy - - preset_data = psy.Project._load_preset(preset) - else: - preset_data = {} - preset_data.update(formatoptions) - preset = tempfile.NamedTemporaryFile(prefix="psy_", suffix=".yml").name - with open(preset, "w") as f: - yaml.dump(preset_data, f) - - # make preset path absolute - if ( - preset is not None - and not isinstance(preset, dict) - and osp.exists(preset) - ): - preset = osp.abspath(preset) - - # Lock file creation - if not new_instance: - lock_file = osp.join(get_configdir(), "psyplot.lock") - lock = fasteners.InterProcessLock(lock_file) - - # Try to lock psyplot.lock. If it's *possible* to do it, then - # there is no previous instance running and we can start a - # new one. If *not*, then there is an instance already - # running, which is locking that file - lock_created = lock.acquire(False) - else: - lock_created = False - - chname = dict(chname) - - if lock_created: - # Start a new instance - atexit.register(lock.release) - elif not new_instance: - if callback is None: - if fnames or project: - callback = "new_plot" - elif pwd is not None: - callback = "change_cwd" - fnames = [pwd] - elif script is not None: - callback = "run_script" - fnames = [script] - elif command is not None: - callback = "command" - engine = command - if callback: - send_files_to_psyplot( - callback, - fnames, - project, - engine, - plot_method, - name, - dims, - encoding, - enable_post, - seaborn_style, - concat_dim, - chname, - preset, - decoder, - ) - return - elif new_instance: - rcParams["main.listen_to_port"] = False - if backend is not False: - rcParams["backend"] = backend - from psyplot_gui.main import MainWindow - - fnames = _get_abs_names(fnames) - if project is not None: - project = _get_abs_names([project])[0] - if exec_: - from psyplot_gui.compat.qtcompat import QApplication - - app = QApplication(sys.argv) - - _set_opengl_implementation(opengl_implementation) - - if isinstance(new_instance, MainWindow): - mainwindow = new_instance - else: - mainwindow = MainWindow.run( - fnames, - project, - engine, - plot_method, - name, - dims, - encoding, - enable_post, - seaborn_style, - concat_dim, - chname, - preset, - decoder, - ) - if script is not None: - mainwindow.console.run_script_in_shell(script) - if command is not None: - mainwindow.console.run_command_in_shell(command) - if exec_: - sys.excepthook = mainwindow.excepthook - sys.exit(app.exec_()) - else: - return mainwindow - - -def send_files_to_psyplot(callback, fnames, project, *args): - """ - Simple socket client used to send the args passed to the psyplot - executable to an already running instance. - - This function has to most parts been taken from spyder - """ - port = rcParams["main.open_files_port"] - - # Wait ~50 secs for the server to be up - # Taken from http://stackoverflow.com/a/4766598/438386 - for _x in range(200): - fnames = _get_abs_names(fnames) - if project is not None: - project = _get_abs_names([project])[0] - try: - client = socket.socket( - socket.AF_INET, socket.SOCK_STREAM, socket.IPPROTO_TCP - ) - client.connect(("127.0.0.1", port)) - client.send(pickle.dumps([callback, fnames, project] + list(args))) - client.close() - except socket.error: - time.sleep(0.25) - continue - break - - -def _get_abs_names(fnames): - """Return the absolute paths of the given filenames""" - if fnames is None: - return - for i, fname in enumerate(fnames): - if fname: - fnames[i] = ",".join(map(osp.abspath, fname.split(","))) - return fnames - - -def get_parser(create=True): - """Return a parser to make that can be used to make plots or open files - from the command line - - Returns - ------- - psyplot.parser.FuncArgParser - The :class:`argparse.ArgumentParser` instance - - See Also - -------- - psyplot.main.get_parser - psyplot.parser.FuncArgParser - psyplot.main.main""" - from psyplot.__main__ import get_parser - - parser = get_parser(create=False) - - parser.setup_args(start_app) - - gui_grp = parser.add_argument_group( - "Gui options", "Options specific to the graphical user interface" - ) - - parser.update_arg( - "backend", - short="b", - const=None, - nargs="?", - metavar="backend", - help=""" - The backend to use. By default, the ``'gui.backend'`` key in the - :attr:`~psyplot_gui.config.rcsetup.rcParams` dictionary is used. If - used without options, the default matplotlib backend is used.""", - group=gui_grp, - ) - - parser.update_arg("new_instance", short="ni", group=gui_grp) - - parser.update_arg("rc_gui_file", short="rc-gui", group=gui_grp) - parser.pop_key("rc_gui_file", "metavar") - parser.update_arg( - "include_plugins", - short="inc", - group=gui_grp, - default=rcParams["plugins.include"], - ) - parser.append2help("include_plugins", ". Default: %(default)s") - parser.update_arg( - "exclude_plugins", - short="exc", - group=gui_grp, - default=rcParams["plugins.exclude"], - ) - parser.append2help("exclude_plugins", ". Default: %(default)s") - - parser.update_arg("offline", group=gui_grp) - parser.update_arg("pwd", group=gui_grp) - parser.update_arg("script", short="s", group=gui_grp) - parser.update_arg("command", short="c", group=gui_grp) - - parser.update_arg( - "opengl_implementation", - group=gui_grp, - short="opengl", - choices=["software", "desktop", "gles", "automatic"], - ) - - # add an action to display the GUI plugins - info_grp = parser.unfinished_arguments["list_plugins"].get("group") - parser.update_arg( - "list_gui_plugins", - short="lgp", - long="list-gui-plugins", - action=ListGuiPluginsAction, - if_existent=False, - help=( - "Print the names of the GUI plugins and exit. Note that the " - "displayed plugins are not affected by the `include-plugins` " - "and `exclude-plugins` options" - ), - ) - if info_grp is not None: - parser.unfinished_arguments["list_gui_plugins"]["group"] = info_grp - - parser.pop_key("offline", "short") - - parser.append2help( - "output_project", - ". This option has only an effect if the `output` " " option is set.", - ) - - parser.update_arg("use_all", short="a") - - parser.pop_arg("exec_") - parser.pop_arg("callback") - - parser.pop_key("webengineview", "short") - parser.update_arg( - "webengineview", default=None, action="store_true", group=gui_grp - ) - - parser.unfinished_arguments["no-webengineview"] = dict( - long="no-webengineview", - default=None, - action="store_false", - dest="webengineview", - help="Do not use HTML rendering.", - group=gui_grp, - ) - - if psyplot.__version__ < "1.0": - parser.set_main(start_app) - - parser.epilog += """ - -If you omit the ``'-o'`` option, the file is opened in the graphical user -interface and if you run:: - - $ psyplot -pwd . - -It will switch the directory of the already running GUI (if existent) to the -current working directory in your terminal. Additionally,:: - - $ psyplot -s myscript.py - -will run the file ``'myscript.py'`` in the GUI and:: - - $ psyplot -c 'print("Hello World!")' - -will execute ``print("Hello World")`` in the GUI. The output, of the `-s` and -`-c` options, will, however, be shown in the terminal.""" - - if create: - parser.create_arguments() - - return parser - - -#: A boolean variable to check if the GUI is tested. This is set automatically -#: true on CI services -UNIT_TESTING = os.getenv("CI") - - -class ListGuiPluginsAction(argparse.Action): - def __init__( - self, - option_strings, - dest=argparse.SUPPRESS, - nargs=None, - default=argparse.SUPPRESS, - **kwargs, - ): - if nargs is not None: - raise ValueError("nargs not allowed") - kwargs["default"] = default - super(ListGuiPluginsAction, self).__init__( - option_strings, nargs=0, dest=dest, **kwargs - ) - - def __call__(self, parser, namespace, values, option_string=None): - import yaml - - if not rcParams._plugins: - list(rcParams._load_plugin_entrypoints()) - print(yaml.dump(rcParams._plugins, default_flow_style=False)) - sys.exit(0) - - -def _set_opengl_implementation(option): - """ - Set the OpenGL implementation - - This function has been taken from spyder - (see https://github.com/spyder-ide/spyder/pull/7859) - - See issue https://github.com/spyder-ide/spyder/issues/7447 for the details. - """ - try: - from PyQt5.QtQuick import QQuickWindow, QSGRendererInterface - except Exception: - QQuickWindow = QSGRendererInterface = None - from PyQt5.QtCore import QCoreApplication, Qt - - if option is None: - option = rcParams["main.opengl"] - if option == "software": - QCoreApplication.setAttribute(Qt.AA_UseSoftwareOpenGL) - if QQuickWindow is not None: - QQuickWindow.setSceneGraphBackend(QSGRendererInterface.Software) - elif option == "desktop": - QCoreApplication.setAttribute(Qt.AA_UseDesktopOpenGL) - if QQuickWindow is not None: - QQuickWindow.setSceneGraphBackend(QSGRendererInterface.OpenGL) - elif option == "gles": - QCoreApplication.setAttribute(Qt.AA_UseOpenGLES) - if QQuickWindow is not None: - QQuickWindow.setSceneGraphBackend(QSGRendererInterface.OpenGL) diff --git a/psyplot_gui/_version.py b/psyplot_gui/_version.py deleted file mode 100644 index 6942f8f..0000000 --- a/psyplot_gui/_version.py +++ /dev/null @@ -1,698 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -# This file helps to compute a version number in source trees obtained from -# git-archive tarball (such as those provided by githubs download-from-tag -# feature). Distribution tarballs (built by setup.py sdist) and build -# directories (produced by setup.py build) will contain a much shorter file -# that just contains the computed version number. - -# This file is released into the public domain. Generated by -# versioneer-0.21 (https://github.com/python-versioneer/python-versioneer) - -"""Git implementation of _version.py.""" - -import errno -import os -import re -import subprocess -import sys -from typing import Callable, Dict - - -def get_keywords(): - """Get the keywords needed to look up the version information.""" - # these strings will be replaced by git during git-archive. - # setup.py/versioneer.py will grep for the variable names, so they must - # each be defined on a line of their own. _version.py will just call - # get_keywords(). - git_refnames = "$Format:%d$" - git_full = "$Format:%H$" - git_date = "$Format:%ci$" - keywords = {"refnames": git_refnames, "full": git_full, "date": git_date} - return keywords - - -class VersioneerConfig: - """Container for Versioneer configuration parameters.""" - - -def get_config(): - """Create, populate and return the VersioneerConfig() object.""" - # these strings are filled in when 'setup.py versioneer' creates - # _version.py - cfg = VersioneerConfig() - cfg.VCS = "git" - cfg.style = "pep440" - cfg.tag_prefix = "v" - cfg.parentdir_prefix = "psyplot-gui-" - cfg.versionfile_source = "psyplot_gui/_version.py" - cfg.verbose = False - return cfg - - -class NotThisMethod(Exception): - """Exception raised if a method is not valid for the current scenario.""" - - -LONG_VERSION_PY: Dict[str, str] = {} -HANDLERS: Dict[str, Dict[str, Callable]] = {} - - -def register_vcs_handler(vcs, method): # decorator - """Create decorator to mark a method as the handler of a VCS.""" - - def decorate(f): - """Store f in HANDLERS[vcs][method].""" - if vcs not in HANDLERS: - HANDLERS[vcs] = {} - HANDLERS[vcs][method] = f - return f - - return decorate - - -def run_command( - commands, args, cwd=None, verbose=False, hide_stderr=False, env=None -): - """Call the given command(s).""" - assert isinstance(commands, list) - process = None - for command in commands: - try: - dispcmd = str([command] + args) - # remember shell=False, so use git.cmd on windows, not just git - process = subprocess.Popen( - [command] + args, - cwd=cwd, - env=env, - stdout=subprocess.PIPE, - stderr=(subprocess.PIPE if hide_stderr else None), - ) - break - except OSError: - e = sys.exc_info()[1] - if e.errno == errno.ENOENT: - continue - if verbose: - print("unable to run %s" % dispcmd) - print(e) - return None, None - else: - if verbose: - print("unable to find command, tried %s" % (commands,)) - return None, None - stdout = process.communicate()[0].strip().decode() - if process.returncode != 0: - if verbose: - print("unable to run %s (error)" % dispcmd) - print("stdout was %s" % stdout) - return None, process.returncode - return stdout, process.returncode - - -def versions_from_parentdir(parentdir_prefix, root, verbose): - """Try to determine the version from the parent directory name. - - Source tarballs conventionally unpack into a directory that includes both - the project name and a version string. We will also support searching up - two directory levels for an appropriately named parent directory - """ - rootdirs = [] - - for _ in range(3): - dirname = os.path.basename(root) - if dirname.startswith(parentdir_prefix): - return { - "version": dirname[len(parentdir_prefix) :], - "full-revisionid": None, - "dirty": False, - "error": None, - "date": None, - } - rootdirs.append(root) - root = os.path.dirname(root) # up a level - - if verbose: - print( - "Tried directories %s but none started with prefix %s" - % (str(rootdirs), parentdir_prefix) - ) - raise NotThisMethod("rootdir doesn't start with parentdir_prefix") - - -@register_vcs_handler("git", "get_keywords") -def git_get_keywords(versionfile_abs): - """Extract version information from the given file.""" - # the code embedded in _version.py can just fetch the value of these - # keywords. When used from setup.py, we don't want to import _version.py, - # so we do it with a regexp instead. This function is not used from - # _version.py. - keywords = {} - try: - with open(versionfile_abs, "r") as fobj: - for line in fobj: - if line.strip().startswith("git_refnames ="): - mo = re.search(r'=\s*"(.*)"', line) - if mo: - keywords["refnames"] = mo.group(1) - if line.strip().startswith("git_full ="): - mo = re.search(r'=\s*"(.*)"', line) - if mo: - keywords["full"] = mo.group(1) - if line.strip().startswith("git_date ="): - mo = re.search(r'=\s*"(.*)"', line) - if mo: - keywords["date"] = mo.group(1) - except OSError: - pass - return keywords - - -@register_vcs_handler("git", "keywords") -def git_versions_from_keywords(keywords, tag_prefix, verbose): - """Get version information from git keywords.""" - if "refnames" not in keywords: - raise NotThisMethod("Short version file found") - date = keywords.get("date") - if date is not None: - # Use only the last line. Previous lines may contain GPG signature - # information. - date = date.splitlines()[-1] - - # git-2.2.0 added "%cI", which expands to an ISO-8601 -compliant - # datestamp. However we prefer "%ci" (which expands to an "ISO-8601 - # -like" string, which we must then edit to make compliant), because - # it's been around since git-1.5.3, and it's too difficult to - # discover which version we're using, or to work around using an - # older one. - date = date.strip().replace(" ", "T", 1).replace(" ", "", 1) - refnames = keywords["refnames"].strip() - if refnames.startswith("$Format"): - if verbose: - print("keywords are unexpanded, not using") - raise NotThisMethod("unexpanded keywords, not a git-archive tarball") - refs = {r.strip() for r in refnames.strip("()").split(",")} - # starting in git-1.8.3, tags are listed as "tag: foo-1.0" instead of - # just "foo-1.0". If we see a "tag: " prefix, prefer those. - TAG = "tag: " - tags = {r[len(TAG) :] for r in refs if r.startswith(TAG)} - if not tags: - # Either we're using git < 1.8.3, or there really are no tags. We use - # a heuristic: assume all version tags have a digit. The old git %d - # expansion behaves like git log --decorate=short and strips out the - # refs/heads/ and refs/tags/ prefixes that would let us distinguish - # between branches and tags. By ignoring refnames without digits, we - # filter out many common branch names like "release" and - # "stabilization", as well as "HEAD" and "master". - tags = {r for r in refs if re.search(r"\d", r)} - if verbose: - print("discarding '%s', no digits" % ",".join(refs - tags)) - if verbose: - print("likely tags: %s" % ",".join(sorted(tags))) - for ref in sorted(tags): - # sorting will prefer e.g. "2.0" over "2.0rc1" - if ref.startswith(tag_prefix): - r = ref[len(tag_prefix) :] - # Filter out refs that exactly match prefix or that don't start - # with a number once the prefix is stripped (mostly a concern - # when prefix is '') - if not re.match(r"\d", r): - continue - if verbose: - print("picking %s" % r) - return { - "version": r, - "full-revisionid": keywords["full"].strip(), - "dirty": False, - "error": None, - "date": date, - } - # no suitable tags, so version is "0+unknown", but full hex is still there - if verbose: - print("no suitable tags, using unknown + full revision id") - return { - "version": "0+unknown", - "full-revisionid": keywords["full"].strip(), - "dirty": False, - "error": "no suitable tags", - "date": None, - } - - -@register_vcs_handler("git", "pieces_from_vcs") -def git_pieces_from_vcs(tag_prefix, root, verbose, runner=run_command): - """Get version from 'git describe' in the root of the source tree. - - This only gets called if the git-archive 'subst' keywords were *not* - expanded, and _version.py hasn't already been rewritten with a short - version string, meaning we're inside a checked out source tree. - """ - GITS = ["git"] - TAG_PREFIX_REGEX = "*" - if sys.platform == "win32": - GITS = ["git.cmd", "git.exe"] - TAG_PREFIX_REGEX = r"\*" - - _, rc = runner( - GITS, ["rev-parse", "--git-dir"], cwd=root, hide_stderr=True - ) - if rc != 0: - if verbose: - print("Directory %s not under git control" % root) - raise NotThisMethod("'git rev-parse --git-dir' returned error") - - # if there is a tag matching tag_prefix, this yields TAG-NUM-gHEX[-dirty] - # if there isn't one, this yields HEX[-dirty] (no NUM) - describe_out, rc = runner( - GITS, - [ - "describe", - "--tags", - "--dirty", - "--always", - "--long", - "--match", - "%s%s" % (tag_prefix, TAG_PREFIX_REGEX), - ], - cwd=root, - ) - # --long was added in git-1.5.5 - if describe_out is None: - raise NotThisMethod("'git describe' failed") - describe_out = describe_out.strip() - full_out, rc = runner(GITS, ["rev-parse", "HEAD"], cwd=root) - if full_out is None: - raise NotThisMethod("'git rev-parse' failed") - full_out = full_out.strip() - - pieces = {} - pieces["long"] = full_out - pieces["short"] = full_out[:7] # maybe improved later - pieces["error"] = None - - branch_name, rc = runner( - GITS, ["rev-parse", "--abbrev-ref", "HEAD"], cwd=root - ) - # --abbrev-ref was added in git-1.6.3 - if rc != 0 or branch_name is None: - raise NotThisMethod("'git rev-parse --abbrev-ref' returned error") - branch_name = branch_name.strip() - - if branch_name == "HEAD": - # If we aren't exactly on a branch, pick a branch which represents - # the current commit. If all else fails, we are on a branchless - # commit. - branches, rc = runner(GITS, ["branch", "--contains"], cwd=root) - # --contains was added in git-1.5.4 - if rc != 0 or branches is None: - raise NotThisMethod("'git branch --contains' returned error") - branches = branches.split("\n") - - # Remove the first line if we're running detached - if "(" in branches[0]: - branches.pop(0) - - # Strip off the leading "* " from the list of branches. - branches = [branch[2:] for branch in branches] - if "master" in branches: - branch_name = "master" - elif not branches: - branch_name = None - else: - # Pick the first branch that is returned. Good or bad. - branch_name = branches[0] - - pieces["branch"] = branch_name - - # parse describe_out. It will be like TAG-NUM-gHEX[-dirty] or HEX[-dirty] - # TAG might have hyphens. - git_describe = describe_out - - # look for -dirty suffix - dirty = git_describe.endswith("-dirty") - pieces["dirty"] = dirty - if dirty: - git_describe = git_describe[: git_describe.rindex("-dirty")] - - # now we have TAG-NUM-gHEX or HEX - - if "-" in git_describe: - # TAG-NUM-gHEX - mo = re.search(r"^(.+)-(\d+)-g([0-9a-f]+)$", git_describe) - if not mo: - # unparsable. Maybe git-describe is misbehaving? - pieces["error"] = ( - "unable to parse git-describe output: '%s'" % describe_out - ) - return pieces - - # tag - full_tag = mo.group(1) - if not full_tag.startswith(tag_prefix): - if verbose: - fmt = "tag '%s' doesn't start with prefix '%s'" - print(fmt % (full_tag, tag_prefix)) - pieces["error"] = "tag '%s' doesn't start with prefix '%s'" % ( - full_tag, - tag_prefix, - ) - return pieces - pieces["closest-tag"] = full_tag[len(tag_prefix) :] - - # distance: number of commits since tag - pieces["distance"] = int(mo.group(2)) - - # commit: short hex revision ID - pieces["short"] = mo.group(3) - - else: - # HEX: no tags - pieces["closest-tag"] = None - count_out, rc = runner(GITS, ["rev-list", "HEAD", "--count"], cwd=root) - pieces["distance"] = int(count_out) # total number of commits - - # commit date: see ISO-8601 comment in git_versions_from_keywords() - date = runner(GITS, ["show", "-s", "--format=%ci", "HEAD"], cwd=root)[ - 0 - ].strip() - # Use only the last line. Previous lines may contain GPG signature - # information. - date = date.splitlines()[-1] - pieces["date"] = date.strip().replace(" ", "T", 1).replace(" ", "", 1) - - return pieces - - -def plus_or_dot(pieces): - """Return a + if we don't already have one, else return a .""" - if "+" in pieces.get("closest-tag", ""): - return "." - return "+" - - -def render_pep440(pieces): - """Build up version string, with post-release "local version identifier". - - Our goal: TAG[+DISTANCE.gHEX[.dirty]] . Note that if you - get a tagged build and then dirty it, you'll get TAG+0.gHEX.dirty - - Exceptions: - 1: no tags. git_describe was just HEX. 0+untagged.DISTANCE.gHEX[.dirty] - """ - if pieces["closest-tag"]: - rendered = pieces["closest-tag"] - if pieces["distance"] or pieces["dirty"]: - rendered += plus_or_dot(pieces) - rendered += "%d.g%s" % (pieces["distance"], pieces["short"]) - if pieces["dirty"]: - rendered += ".dirty" - else: - # exception #1 - rendered = "0+untagged.%d.g%s" % (pieces["distance"], pieces["short"]) - if pieces["dirty"]: - rendered += ".dirty" - return rendered - - -def render_pep440_branch(pieces): - """TAG[[.dev0]+DISTANCE.gHEX[.dirty]] . - - The ".dev0" means not master branch. Note that .dev0 sorts backwards - (a feature branch will appear "older" than the master branch). - - Exceptions: - 1: no tags. 0[.dev0]+untagged.DISTANCE.gHEX[.dirty] - """ - if pieces["closest-tag"]: - rendered = pieces["closest-tag"] - if pieces["distance"] or pieces["dirty"]: - if pieces["branch"] != "master": - rendered += ".dev0" - rendered += plus_or_dot(pieces) - rendered += "%d.g%s" % (pieces["distance"], pieces["short"]) - if pieces["dirty"]: - rendered += ".dirty" - else: - # exception #1 - rendered = "0" - if pieces["branch"] != "master": - rendered += ".dev0" - rendered += "+untagged.%d.g%s" % (pieces["distance"], pieces["short"]) - if pieces["dirty"]: - rendered += ".dirty" - return rendered - - -def pep440_split_post(ver): - """Split pep440 version string at the post-release segment. - - Returns the release segments before the post-release and the - post-release version number (or -1 if no post-release segment is present). - """ - vc = str.split(ver, ".post") - return vc[0], int(vc[1] or 0) if len(vc) == 2 else None - - -def render_pep440_pre(pieces): - """TAG[.postN.devDISTANCE] -- No -dirty. - - Exceptions: - 1: no tags. 0.post0.devDISTANCE - """ - if pieces["closest-tag"]: - if pieces["distance"]: - # update the post release segment - tag_version, post_version = pep440_split_post( - pieces["closest-tag"] - ) - rendered = tag_version - if post_version is not None: - rendered += ".post%d.dev%d" % ( - post_version + 1, - pieces["distance"], - ) - else: - rendered += ".post0.dev%d" % (pieces["distance"]) - else: - # no commits, use the tag as the version - rendered = pieces["closest-tag"] - else: - # exception #1 - rendered = "0.post0.dev%d" % pieces["distance"] - return rendered - - -def render_pep440_post(pieces): - """TAG[.postDISTANCE[.dev0]+gHEX] . - - The ".dev0" means dirty. Note that .dev0 sorts backwards - (a dirty tree will appear "older" than the corresponding clean one), - but you shouldn't be releasing software with -dirty anyways. - - Exceptions: - 1: no tags. 0.postDISTANCE[.dev0] - """ - if pieces["closest-tag"]: - rendered = pieces["closest-tag"] - if pieces["distance"] or pieces["dirty"]: - rendered += ".post%d" % pieces["distance"] - if pieces["dirty"]: - rendered += ".dev0" - rendered += plus_or_dot(pieces) - rendered += "g%s" % pieces["short"] - else: - # exception #1 - rendered = "0.post%d" % pieces["distance"] - if pieces["dirty"]: - rendered += ".dev0" - rendered += "+g%s" % pieces["short"] - return rendered - - -def render_pep440_post_branch(pieces): - """TAG[.postDISTANCE[.dev0]+gHEX[.dirty]] . - - The ".dev0" means not master branch. - - Exceptions: - 1: no tags. 0.postDISTANCE[.dev0]+gHEX[.dirty] - """ - if pieces["closest-tag"]: - rendered = pieces["closest-tag"] - if pieces["distance"] or pieces["dirty"]: - rendered += ".post%d" % pieces["distance"] - if pieces["branch"] != "master": - rendered += ".dev0" - rendered += plus_or_dot(pieces) - rendered += "g%s" % pieces["short"] - if pieces["dirty"]: - rendered += ".dirty" - else: - # exception #1 - rendered = "0.post%d" % pieces["distance"] - if pieces["branch"] != "master": - rendered += ".dev0" - rendered += "+g%s" % pieces["short"] - if pieces["dirty"]: - rendered += ".dirty" - return rendered - - -def render_pep440_old(pieces): - """TAG[.postDISTANCE[.dev0]] . - - The ".dev0" means dirty. - - Exceptions: - 1: no tags. 0.postDISTANCE[.dev0] - """ - if pieces["closest-tag"]: - rendered = pieces["closest-tag"] - if pieces["distance"] or pieces["dirty"]: - rendered += ".post%d" % pieces["distance"] - if pieces["dirty"]: - rendered += ".dev0" - else: - # exception #1 - rendered = "0.post%d" % pieces["distance"] - if pieces["dirty"]: - rendered += ".dev0" - return rendered - - -def render_git_describe(pieces): - """TAG[-DISTANCE-gHEX][-dirty]. - - Like 'git describe --tags --dirty --always'. - - Exceptions: - 1: no tags. HEX[-dirty] (note: no 'g' prefix) - """ - if pieces["closest-tag"]: - rendered = pieces["closest-tag"] - if pieces["distance"]: - rendered += "-%d-g%s" % (pieces["distance"], pieces["short"]) - else: - # exception #1 - rendered = pieces["short"] - if pieces["dirty"]: - rendered += "-dirty" - return rendered - - -def render_git_describe_long(pieces): - """TAG-DISTANCE-gHEX[-dirty]. - - Like 'git describe --tags --dirty --always -long'. - The distance/hash is unconditional. - - Exceptions: - 1: no tags. HEX[-dirty] (note: no 'g' prefix) - """ - if pieces["closest-tag"]: - rendered = pieces["closest-tag"] - rendered += "-%d-g%s" % (pieces["distance"], pieces["short"]) - else: - # exception #1 - rendered = pieces["short"] - if pieces["dirty"]: - rendered += "-dirty" - return rendered - - -def render(pieces, style): - """Render the given version pieces into the requested style.""" - if pieces["error"]: - return { - "version": "unknown", - "full-revisionid": pieces.get("long"), - "dirty": None, - "error": pieces["error"], - "date": None, - } - - if not style or style == "default": - style = "pep440" # the default - - if style == "pep440": - rendered = render_pep440(pieces) - elif style == "pep440-branch": - rendered = render_pep440_branch(pieces) - elif style == "pep440-pre": - rendered = render_pep440_pre(pieces) - elif style == "pep440-post": - rendered = render_pep440_post(pieces) - elif style == "pep440-post-branch": - rendered = render_pep440_post_branch(pieces) - elif style == "pep440-old": - rendered = render_pep440_old(pieces) - elif style == "git-describe": - rendered = render_git_describe(pieces) - elif style == "git-describe-long": - rendered = render_git_describe_long(pieces) - else: - raise ValueError("unknown style '%s'" % style) - - return { - "version": rendered, - "full-revisionid": pieces["long"], - "dirty": pieces["dirty"], - "error": None, - "date": pieces.get("date"), - } - - -def get_versions(): - """Get version information or return default if unable to do so.""" - # I am in _version.py, which lives at ROOT/VERSIONFILE_SOURCE. If we have - # __file__, we can work backwards from there to the root. Some - # py2exe/bbfreeze/non-CPython implementations don't do __file__, in which - # case we can only use expanded keywords. - - cfg = get_config() - verbose = cfg.verbose - - try: - return git_versions_from_keywords( - get_keywords(), cfg.tag_prefix, verbose - ) - except NotThisMethod: - pass - - try: - root = os.path.realpath(__file__) - # versionfile_source is the relative path from the top of the source - # tree (where the .git directory might live) to this file. Invert - # this to find the root from __file__. - for _ in cfg.versionfile_source.split("/"): - root = os.path.dirname(root) - except NameError: - return { - "version": "0+unknown", - "full-revisionid": None, - "dirty": None, - "error": "unable to find root of source tree", - "date": None, - } - - try: - pieces = git_pieces_from_vcs(cfg.tag_prefix, root, verbose) - return render(pieces, cfg.style) - except NotThisMethod: - pass - - try: - if cfg.parentdir_prefix: - return versions_from_parentdir(cfg.parentdir_prefix, root, verbose) - except NotThisMethod: - pass - - return { - "version": "0+unknown", - "full-revisionid": None, - "dirty": None, - "error": "unable to compute version", - "date": None, - } diff --git a/psyplot_gui/backend.py b/psyplot_gui/backend.py deleted file mode 100644 index c1c94ec..0000000 --- a/psyplot_gui/backend.py +++ /dev/null @@ -1,162 +0,0 @@ -"""Matplotlib backend to include matplotlib figures as dockwidgets in the -psyplot gui - -This backend is based upon matplotlibs qt4agg and qt5agg backends.""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -from matplotlib.backend_bases import FigureManagerBase -from matplotlib.figure import Figure - -from psyplot_gui.common import DockMixin -from psyplot_gui.compat.qtcompat import ( - QDockWidget, - Qt, - QVBoxLayout, - QWidget, - with_qt5, -) - -if with_qt5: - from matplotlib.backends.backend_qt5agg import ( - FigureCanvasQTAgg, - FigureManagerQT, - ) -else: - from matplotlib.backends.backend_qt4agg import ( - FigureCanvasQTAgg, - FigureManagerQT, - ) - - -class FiguresDock(QDockWidget): - """Reimplemented QDockWidget to remove the dock widget when closed""" - - def close(self, *args, **kwargs): - """ - Reimplemented to remove the dock widget from the mainwindow when closed - """ - from psyplot_gui.main import mainwindow - - try: - mainwindow.figures.remove(self) - except Exception: - pass - try: - mainwindow.removeDockWidget(self) - except Exception: - pass - return super(FiguresDock, self).close(*args, **kwargs) - - -class FigureWidget(DockMixin, QWidget): - """A simple container for figures in the psyplot backend""" - - dock_cls = FiguresDock - - -def new_figure_manager(num, *args, **kwargs): - """ - Create a new figure manager instance - """ - FigureClass = kwargs.pop("FigureClass", Figure) - thisFig = FigureClass(*args, **kwargs) - return new_figure_manager_given_figure(num, thisFig) - - -def new_figure_manager_given_figure(num, figure): - """ - Create a new figure manager instance for the given figure. - """ - canvas = PsyplotCanvas(figure) - return PsyplotCanvasManager(canvas, num) - - -class PsyplotCanvasManager(FigureManagerQT): - """The canvas manager for the psyplot backend interacting with the - mainwindow of the psyplot gui""" - - toolbar = None - - def __init__(self, canvas, num): - from psyplot_gui.main import mainwindow - - self.main = mainwindow - if mainwindow is None: - return super(PsyplotCanvasManager, self).__init__(canvas, num) - parent_widget = FigureWidget() - parent_widget.vbox = vbox = QVBoxLayout() - self.window = dock = parent_widget.to_dock( - mainwindow, - title="Figure %d" % num, - position=Qt.TopDockWidgetArea, - docktype=None, - ) - if mainwindow.figures: - mainwindow.tabifyDockWidget(mainwindow.figures[-1], dock) - mainwindow.figures.append(dock) - FigureManagerBase.__init__(self, canvas, num) - self.canvas = canvas - - self.window.setWindowTitle("Figure %d" % num) - - if hasattr(self, "_get_toolbar"): - # legacy solution for matplotlib < 3.6 - self.toolbar = self._get_toolbar(canvas, parent_widget) - - # add text label to status bar - self.statusbar_label = mainwindow.figures_label - - if self.toolbar is not None: - vbox.addWidget(self.toolbar) - self.toolbar.message.connect(self.statusbar_label.setText) - - vbox.addWidget(canvas) - parent_widget.setLayout(vbox) - self.parent_widget = parent_widget - - # Give the keyboard focus to the figure instead of the - # manager; StrongFocus accepts both tab and click to focus and - # will enable the canvas to process event w/o clicking. - # ClickFocus only takes the focus is the window has been - # clicked - # on. http://qt-project.org/doc/qt-4.8/qt.html#FocusPolicy-enum or - # http://doc.qt.digia.com/qt/qt.html#FocusPolicy-enum - self.canvas.setFocusPolicy(Qt.StrongFocus) - self.canvas.setFocus() - self.window._destroying = False - - self.main.show() - - def notify_axes_change(fig): - # This will be called whenever the current axes is changed - if self.toolbar is not None: - self.toolbar.update() - - self.canvas.figure.add_axobserver(notify_axes_change) - - def statusBar(self, *args, **kwargs): - if self.main is None: - return super(PsyplotCanvasManager, self).statusBar(*args, **kwargs) - return self.main.statusBar(*args, **kwargs) - - def resize(self, width, height): - self.window.resize(width, height + self.toolbar.sizeHint().height()) - - -class PsyplotCanvas(FigureCanvasQTAgg): - """The canvas class with reimplemented resizing""" - - def resizeEvent(self, event): - """Reimplemented to make sure that the figure is only resized for - events with height and width greater 0""" - if event.size().width() > 0 and event.size().height() > 0: - super(PsyplotCanvas, self).resizeEvent(event) - - -FigureManager = PsyplotCanvasManager -FigureCanvas = PsyplotCanvas diff --git a/psyplot_gui/common.py b/psyplot_gui/common.py deleted file mode 100644 index 7bb02ca..0000000 --- a/psyplot_gui/common.py +++ /dev/null @@ -1,362 +0,0 @@ -"""Common functions used for the psyplot gui""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -import inspect -import logging -import os.path as osp -import sys -import traceback as tb -from functools import partial - -import six - -from psyplot_gui.compat.qtcompat import ( - QAction, - QDesktopWidget, - QDockWidget, - QErrorMessage, - QIcon, - QInputDialog, - QRegExpValidator, - QtCore, - QToolButton, -) - -if six.PY2: - try: - import CStringIO as io - except ImportError: - import StringIO as io -else: - import io - - -def is_running_tests(): - """Check if there are any GUI tests running - - This function returns the :attr:`psyplot_gui.UNIT_TESTING` variable""" - import psyplot_gui - - return psyplot_gui.UNIT_TESTING - - -def get_module_path(modname): - """Return module `modname` base path""" - - return osp.abspath(osp.dirname(sys.modules[modname].__file__)) - - -def get_icon(name): - """Get the path to an icon in the icons directory""" - return osp.join(get_module_path("psyplot_gui"), "icons", name) - - -class DockMixin(object): - """A mixin class to define psyplot_gui plugins - - Notes - ----- - Each external plugin should set the :attr:`dock_position` and the - :attr:`title` attribute! - """ - - _set_central_action = _view_action = None - - #: The position of the plugin - dock_position = None - - #: The title of the plugin - title = None - - #: The class to use for the DockWidget - dock_cls = QDockWidget - - #: The config page for this widget. Should inherit the - #: :class:`psyplot_gui.preferences.ConfigPage` widget - config_page = None - - #: Boolean that is True if the dock widget should be hidden automatically - #: after startup - hidden = False - - #: The instance of :class:`QDockWidget` of this plugin - dock = None - - @property - def is_shown(self): - """Boolean that is True, if the dock widget is shown""" - return ( - self.dock is not None and self.dock.toggleViewAction().isChecked() - ) - - def to_dock( - self, main, title=None, position=None, docktype="pane", *args, **kwargs - ): - if title is None: - title = self.title - if title is None: - raise ValueError("No title specified for the %s widget" % (self)) - if position is None: - position = self.dock_position - if position is None: - raise ValueError( - "No position specified for the %s widget (%s)" % (title, self) - ) - self.title = title - self.dock_position = position - if self.dock is None: - self.dock = self.dock_cls(title, main) - self.dock.setWidget(self) - main.dockwidgets.append(self.dock) - self.create_central_widget_action(main) - self.create_view_action(main, docktype) - self.position_dock(main, *args, **kwargs) - config_page = self.config_page - if config_page is not None: - main.config_pages.append(config_page) - return self.dock - - def position_dock(self, main, *args, **kwargs): - """Set the position of the dock widget - - This method places the plugin widget at the desired dock position - (by default, indicated with the :attr:`dock_position` attribute) - - Parameters - ---------- - main: psyplot_gui.main.Mainwindow - The main window where the dock is added""" - main.addDockWidget(self.dock_position, self.dock, *args, **kwargs) - - def show_plugin(self): - """Show the plugin widget""" - a = self.dock.toggleViewAction() - if not a.isChecked(): - a.trigger() - - def hide_plugin(self): - """Hide the plugin widget""" - a = self.dock.toggleViewAction() - if a.isChecked(): - a.trigger() - - def show_status_message(self, msg): - """Show a status message""" - try: - self.dock.parent().plugin_label.setText(msg) - except AttributeError: - pass - - def create_central_widget_action(self, main): - """Setup the action to make this plugin the central widget""" - if self._set_central_action is None: - menu = main.central_widgets_menu - group = main.central_widgets_actions - self._set_central_action = action = QAction(self.title, main) - action.setCheckable(True) - action.triggered.connect(partial(main.set_central_widget, self)) - menu.addAction(action) - group.addAction(action) - return self._set_central_action - - def create_view_action(self, main, docktype="pane"): - if self._view_action is None: - self._view_action = action = self.dock.toggleViewAction() - if docktype == "pane": - main.panes_menu.addAction(action) - elif docktype == "df": - main.dataframe_menu.addAction(action) - return self._view_action - - def remove_plugin(self): - """Remove this plugin and close it""" - mainwindow = self.dock.parent() if self.dock else self.parent() - key = next( - (key for key, w in mainwindow.plugins.items() if w is self), None - ) - if mainwindow.centralWidget() is self: - mainwindow.set_central_widget( - mainwindow.__class__.central_widget_key - ) - if self._view_action is not None: - mainwindow.panes_menu.removeAction(self._view_action) - mainwindow.dataframe_menu.removeAction(self._view_action) - if self._set_central_action is not None: - mainwindow.central_widgets_menu.removeAction( - self._set_central_action - ) - if key is not None: - del mainwindow.plugins[key] - if self.dock is not None: - mainwindow.removeDockWidget(self.dock) - self.dock.close() - self.close() - - -class LoadFromConsoleButton(QToolButton): - """A toolbutton to load an object from the console""" - - #: The signal that is emitted when an object has been loaded. The first - #: argument is the object name, the second the object itself - object_loaded = QtCore.pyqtSignal(str, object) - - @property - def instances2check_str(self): - return ", ".join( - "%s.%s" % (cls.__module__, cls.__name__) - for cls in self._instances2check - ) - - @property - def potential_object_names(self): - from ipykernel.inprocess.ipkernel import InProcessInteractiveShell - - shell = InProcessInteractiveShell.instance() - return sorted( - name - for name, obj in shell.user_global_ns.items() - if not name.startswith("_") and self.check(obj) - ) - - def __init__(self, instances=None, *args, **kwargs): - """ - Parameters - ---------- - instances: class or tuple of classes - The classes that should be used for an instance check - """ - super(LoadFromConsoleButton, self).__init__(*args, **kwargs) - self.setIcon(QIcon(get_icon("console-go.png"))) - if instances is not None and inspect.isclass(instances): - instances = (instances,) - self._instances2check = instances - self.error_msg = PyErrorMessage(self) - self.clicked.connect(partial(self.get_from_shell, None)) - - def check(self, obj): - return ( - True - if not self._instances2check - else isinstance(obj, self._instances2check) - ) - - def get_from_shell(self, oname=None): - """Open an input dialog, receive an object and emit the - :attr:`object_loaded` signal""" - if oname is None: - oname, ok = QInputDialog.getItem( - self, - "Select variable", - "Select a variable to import from the console", - self.potential_object_names, - ) - if not ok: - return - if self.check(oname) and ( - self._instances2check or not isinstance(oname, six.string_types) - ): - obj = oname - oname = "object" - else: - found, obj = self.get_obj(oname.strip()) - if found: - if not self.check(obj): - self.error_msg.showMessage( - "Object must be an instance of %r, not %r" - % ( - self.instances2check_str, - "%s.%s" - % (type(obj).__module__, type(obj).__name__), - ) - ) - return - else: - if not oname.strip(): - msg = "The variable name must not be empty!" - else: - msg = "Could not find object " + oname - self.error_msg.showMessage(msg) - return - self.object_loaded.emit(oname, obj) - - def get_obj(self, oname): - """Load an object from the current shell""" - from psyplot_gui.main import mainwindow - - return mainwindow.console.get_obj(oname) - - -class ListValidator(QRegExpValidator): - """A validator class to validate that a string consists of strings in a - list of strings""" - - def __init__(self, valid, sep=",", *args, **kwargs): - """ - Parameters - ---------- - valid: list of str - The possible choices - sep: str, optional - The separation pattern - ``*args,**kwargs`` - Determined by PyQt5.QtGui.QValidator - """ - patt = QtCore.QRegExp("^((%s)(;;)?)+$" % "|".join(valid)) - super(QRegExpValidator, self).__init__(patt, *args, **kwargs) - - -class PyErrorMessage(QErrorMessage): - """Widget designed to display python errors via the :meth:`showTraceback` - method""" - - def showTraceback(self, header=None): - if is_running_tests(): - raise - - s = io.StringIO() - tb.print_exc(file=s) - last_tb = "

" + "
".join(s.getvalue().splitlines()) + "

" - header = header + "\n" if header else "" - self.showMessage(header + last_tb) - available_width = QDesktopWidget().availableGeometry().width() / 3.0 - available_height = QDesktopWidget().availableGeometry().height() / 3.0 - width = self.sizeHint().width() - height = self.sizeHint().height() - # The message window should cover at least one third of the screen - self.resize(max(available_width, width), max(available_height, height)) - - def excepthook(self, type, value, traceback): - s = io.StringIO() - tb.print_exception(type, value, traceback, file=s) - last_tb = "

" + "
".join(s.getvalue().splitlines()) + "

" - header = value.message if six.PY2 else str(value) - self.showMessage(header + "\n" + last_tb) - available_width = QDesktopWidget().availableGeometry().width() / 3.0 - available_height = QDesktopWidget().availableGeometry().height() / 3.0 - width = self.sizeHint().width() - height = self.sizeHint().height() - # The message window should cover at least one third of the screen - self.resize(max(available_width, width), max(available_height, height)) - - -class StreamToLogger(object): - """ - Fake file-like stream object that redirects writes to a logger instance. - """ - - def __init__(self, logger, log_level=logging.INFO): - self.logger = logger - self.log_level = log_level - self.linebuf = "" - - def write(self, buf): - for line in buf.rstrip().splitlines(): - self.logger.log(self.log_level, line.rstrip()) - - def flush(self): - pass diff --git a/psyplot_gui/compat/__init__.py b/psyplot_gui/compat/__init__.py deleted file mode 100755 index 0439e7d..0000000 --- a/psyplot_gui/compat/__init__.py +++ /dev/null @@ -1,7 +0,0 @@ -"""Compatibility module for psyplot-gui""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only diff --git a/psyplot_gui/compat/qtcompat.py b/psyplot_gui/compat/qtcompat.py deleted file mode 100644 index 972c1b1..0000000 --- a/psyplot_gui/compat/qtcompat.py +++ /dev/null @@ -1,242 +0,0 @@ -"""Compatibility module for the different versions of PyQt""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -import sys - -# make sure that the right pyqt version suitable for the IPython console is -# loaded -import six - -from psyplot_gui.config.rcsetup import rcParams - -try: - from qtconsole.rich_jupyter_widget import RichJupyterWidget # noqa: F401 -except ImportError: - pass -try: - import PyQt5 # noqa: F401 -except ImportError: - from PyQt4 import QtCore, QtGui # noqa: F401 - from PyQt4.Qt import PYQT_VERSION_STR as PYQT_VERSION # noqa: F401 - from PyQt4.Qt import QT_VERSION_STR as QT_VERSION # noqa: F401 - from PyQt4.QtCore import Qt # noqa: F401 - from PyQt4.QtGui import ( # noqa: F401 - QAbstractItemView, - QAction, - QActionGroup, - QApplication, - QCheckBox, - ) - from PyQt4.QtGui import QComboBox as OrigQComboBox - from PyQt4.QtGui import ( # noqa: F401 - QCompleter, - QDesktopWidget, - QDialog, - QDialogButtonBox, - QDockWidget, - QDoubleValidator, - QErrorMessage, - QFileDialog, - QFrame, - QGraphicsRectItem, - QGraphicsScene, - QGraphicsView, - QGridLayout, - QHBoxLayout, - QHeaderView, - QIcon, - QInputDialog, - QIntValidator, - QKeyEvent, - QKeySequence, - QLabel, - QLineEdit, - QListView, - QListWidget, - QListWidgetItem, - QMainWindow, - QMenu, - QMessageBox, - QPlainTextEdit, - QPushButton, - QRegExpValidator, - QScrollArea, - QSizePolicy, - QSortFilterProxyModel, - QSplitter, - QStackedWidget, - QStandardItem, - QStandardItemModel, - QStatusBar, - QStyledItemDelegate, - QStyleOptionViewItem, - QTableView, - QTableWidget, - QTableWidgetItem, - QTabWidget, - QTextCursor, - QTextEdit, - QToolBar, - QToolBox, - QToolButton, - QTreeWidget, - QTreeWidgetItem, - QValidator, - QVBoxLayout, - QWidget, - ) - from PyQt4.QtTest import QTest # noqa: F401 - from PyQt4.QtWebKit import QWebView as QWebEngineView # noqa: F401 - - with_qt5 = False - QSignalSpy = None - - try: - from PyQt4.QtCore import QByteArray, QString - except ImportError: - - def isstring(s): - return isinstance(s, six.string_types) - - else: - - def isstring(s): - return isinstance( - s, tuple(list(six.string_types) + [QString, QByteArray]) - ) - - class QComboBox(OrigQComboBox): - currentTextChanged = QtCore.pyqtSignal(str) - - def __init__(self, *args, **kwargs): - OrigQComboBox.__init__(self, *args, **kwargs) - self.currentIndexChanged.connect(self._emit_currentTextChanged) - - def _emit_currentTextChanged(self, i): - self.currentTextChanged.emit(self.currentText()) - - def setCurrentText(self, s): - idx = self.findText(s) - if idx == -1: - self.addItem(s) - idx = self.findText(s) - self.setCurrentIndex(idx) - -else: - from PyQt5 import QtCore - from PyQt5.QtCore import QSortFilterProxyModel, Qt # noqa: F401 - from PyQt5.QtGui import ( # noqa: F401 - QDoubleValidator, - QIcon, - QIntValidator, - QKeyEvent, - QKeySequence, - QRegExpValidator, - QStandardItem, - QStandardItemModel, - QTextCursor, - QValidator, - ) - from PyQt5.QtWidgets import ( # noqa: F401 - QAbstractItemView, - QAction, - QActionGroup, - QApplication, - QCheckBox, - QComboBox, - QCompleter, - QDesktopWidget, - QDialog, - QDialogButtonBox, - QDockWidget, - QErrorMessage, - QFileDialog, - QFrame, - QGraphicsRectItem, - QGraphicsScene, - QGraphicsView, - QGridLayout, - QHBoxLayout, - QHeaderView, - QInputDialog, - QLabel, - QLineEdit, - QListView, - QListWidget, - QListWidgetItem, - QMainWindow, - QMenu, - QMessageBox, - QPlainTextEdit, - QPushButton, - QScrollArea, - QSizePolicy, - QSplitter, - QStackedWidget, - QStatusBar, - QStyledItemDelegate, - QStyleOptionViewItem, - QTableView, - QTableWidget, - QTableWidgetItem, - QTabWidget, - QTextEdit, - QToolBar, - QToolBox, - QToolButton, - QTreeWidget, - QTreeWidgetItem, - QVBoxLayout, - QWidget, - ) - - if rcParams["help_explorer.use_webengineview"]: - try: - from PyQt5.QtWebEngineWidgets import QWebEngineView # noqa: F401 - except ImportError: - from PyQt5.QtWebKitWidgets import ( # noqa: F401 - QWebView as QWebEngineView, - ) - else: - QWebEngineView = None - from PyQt5 import QtGui # noqa: F401 - from PyQt5.Qt import PYQT_VERSION_STR as PYQT_VERSION # noqa: F401 - from PyQt5.Qt import QT_VERSION_STR as QT_VERSION # noqa: F401 - from PyQt5.QtTest import QSignalSpy, QTest # noqa: F401 - - with_qt5 = True - - def isstring(s): - return isinstance(s, six.string_types) - - -def asstring(s): - return six.text_type(s) - - -if sys.platform == "darwin": - # make sure to register the open file event - OrigQApplication = QApplication - - class QApplication(OrigQApplication): - """Reimplemented QApplication with open file event""" - - def event(self, event): - from psyplot_gui.config.rcsetup import rcParams - - if ( - rcParams["main.listen_to_port"] - and event.type() == QtCore.QEvent.FileOpen - ): - from psyplot_gui.main import mainwindow - - if mainwindow is not None: - opened = mainwindow.open_files([event.file()]) - if opened: - return True - return super(QApplication, self).event(event) diff --git a/psyplot_gui/config/__init__.py b/psyplot_gui/config/__init__.py deleted file mode 100755 index 042e35a..0000000 --- a/psyplot_gui/config/__init__.py +++ /dev/null @@ -1,29 +0,0 @@ -"""Configuration module of the psyplot package - -This module contains the module for managing rc parameters and the logging. -Default parameters are defined in the :data:`rcsetup.defaultParams` -dictionary, however you can set up your own configuration in a yaml file (see -:func:`psyplot.load_rc_from_file`)""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -import os.path as osp - -from psyplot.config.logsetup import setup_logging -from psyplot.config.rcsetup import psyplot_fname - -#: :class:`str`. Path to the yaml logging configuration file -logcfg_path = setup_logging( - default_path=osp.join(osp.dirname(__file__), "logging.yml"), - env_key="LOG_PSYPLOTGUI", -) - - -#: class:`str` or ``None``. Path to the yaml configuration file (if found). -#: See :func:`psyplot.config.rcsetup.psyplot_fname` for further -#: information -config_path = psyplot_fname(env_key="PSYPLOTGUIRC", fname="psyplotguirc.yaml") diff --git a/psyplot_gui/config/logging.yml b/psyplot_gui/config/logging.yml deleted file mode 100755 index 3d1c6e0..0000000 --- a/psyplot_gui/config/logging.yml +++ /dev/null @@ -1,79 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC-BY-4.0 - ---- -# logging settings for the nc2map module - -version: 1 - -disable_existing_loggers: False - -formatters: - - simple: - - format: "[%(name)s] - %(levelname)s - %(message)s" - - level_message: - - format: "%(levelname)s: %(message)s" - - full: - format: "%(asctime)s - [%(name)s.%(funcName)s] - %(levelname)s - %(message)s" - - -handlers: - - console: - - class: logging.StreamHandler - - level: INFO - - formatter: simple - - stream: ext://sys.stdout - - warning_console: - - class: logging.StreamHandler - - level: INFO - - formatter: level_message - - stream: ext://sys.stdout - - - debug_file_handler: - - class: logging.handlers.RotatingFileHandler - - mode: w - - level: DEBUG - - formatter: full - - filename: ~/.debug_psyplot.log - - maxBytes: 10485760 # 10MB - - backupCount: 5 - - encoding: utf8 - - delay: True - -loggers: - - psyplot_gui: - - handlers: [console, debug_file_handler] - - propagate: False - - level: INFO - -... diff --git a/psyplot_gui/config/logging_debug.yml b/psyplot_gui/config/logging_debug.yml deleted file mode 100755 index d644654..0000000 --- a/psyplot_gui/config/logging_debug.yml +++ /dev/null @@ -1,78 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC-BY-4.0 - ---- -# debug logging settings (sets the level of the nc2map logger to DEBUG) - -version: 1 - -disable_existing_loggers: False - -formatters: - - simple: - - format: "[%(name)s] - %(levelname)s - %(message)s" - - level_message: - - format: "%(levelname)s: %(message)s" - - full: - format: "%(asctime)s - [%(name)s.%(funcName)s] - %(levelname)s - %(message)s" - - -handlers: - - console: - - class: logging.StreamHandler - - level: INFO - - formatter: simple - - stream: ext://sys.stdout - - warning_console: - - class: logging.StreamHandler - - level: INFO - - formatter: level_message - - stream: ext://sys.stdout - - - debug_file_handler: - - class: logging.handlers.RotatingFileHandler - - mode: w - - level: DEBUG - - formatter: full - - filename: ~/.debug_psyplot.log - - maxBytes: 10485760 # 10MB - - backupCount: 5 - - encoding: utf8 - - delay: True - -loggers: - - psyplot_gui: - - handlers: [console, debug_file_handler] - - propagate: False - - level: DEBUG -... diff --git a/psyplot_gui/config/rcsetup.py b/psyplot_gui/config/rcsetup.py deleted file mode 100755 index ed40cd1..0000000 --- a/psyplot_gui/config/rcsetup.py +++ /dev/null @@ -1,312 +0,0 @@ -"""Default management of the psyplot_gui package - -This module defines the necessary configuration parts for the psyplot gui""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -import logging - -import six -from matplotlib.rcsetup import validate_bool, validate_int -from psyplot.config.rcsetup import ( - RcParams, - psyplot_fname, - validate_bool_maybe_none, - validate_stringlist, -) - - -def try_and_error(*funcs): - """Apply multiple validation functions - - Parameters - ---------- - ``*funcs`` - Validation functions to test - - Returns - ------- - function""" - - def validate(value): - exc = None - for func in funcs: - try: - return func(value) - except (ValueError, TypeError) as e: - exc = e - raise exc - - return validate - - -# ----------------------------------------------------------------------------- -# ------------------------- validation functions ------------------------------ -# ----------------------------------------------------------------------------- - - -def validate_str(s): - """Validate a string - - Parameters - ---------- - s: str - - Returns - ------- - str - - Raises - ------ - ValueError""" - if not isinstance(s, six.string_types): - raise ValueError("Did not found string!") - return six.text_type(s) - - -def validate_none(b): - """Validate that None is given - - Parameters - ---------- - b: {None, 'none'} - None or string (the case is ignored) - - Returns - ------- - None - - Raises - ------ - ValueError""" - if isinstance(b, six.string_types): - b = b.lower() - if b is None or b == "none": - return None - else: - raise ValueError('Could not convert "%s" to None' % b) - - -def validate_all(v): - """Test if ``v == 'all'``""" - if v != "all": - raise ValueError("The value must be 'all'") - return six.text_type(v) - - -class GuiRcParams(RcParams): - """RcParams for the psyplot-gui package.""" - - HEADER = RcParams.HEADER.replace( - "psyplotrc.yml", "psyplotguirc.yml" - ).replace("PSYPLOTRC", "psyplotrc.yml") - - def load_from_file(self, fname=None): - """ - Update rcParams from user-defined settings - - This function updates the instance with what is found in `fname` - - Parameters - ---------- - fname: str - Path to the yaml configuration file. Possible keys of the - dictionary are defined by :data:`config.rcsetup.defaultParams`. - If None, the :func:`config.rcsetup.psyplot_fname` function is used. - - See Also - -------- - dump_to_file, psyplot_fname""" - fname = fname or psyplot_fname( - env_key="PSYPLOTGUIRC", fname="psyplotguirc.yml" - ) - if fname: - super(GuiRcParams, self).load_from_file(fname) - - def _load_plugin_entrypoints(self): - """Load the modules for the psyplot plugins - - Yields - ------ - pkg_resources.EntryPoint - The entry point for the psyplot plugin module""" - from pkg_resources import iter_entry_points - - inc = self["plugins.include"] - exc = self["plugins.exclude"] - logger = logging.getLogger(__name__) - self._plugins = self._plugins or [] - for ep in iter_entry_points("psyplot_gui"): - try: - ep.module - except AttributeError: # python<3.10 - try: - ep.module = ep.pattern.match(ep.value).group("module") - except AttributeError: # python<3.8 - ep.module = ep.module_name - - plugin_name = "%s:%s:%s" % (ep.module, ":".join(ep.attrs), ep.name) - # check if the user wants to explicitly this plugin - include_user = None - if inc: - include_user = ( - ep.module in inc - or ep.name in inc - or "%s:%s" % (ep.module, ":".join(ep.attrs)) in inc - ) - if include_user is None and exc == "all": - include_user = False - elif include_user is None: - # check for exclude - include_user = not ( - ep.module in exc - or ep.name in exc - or "%s:%s" % (ep.module, ":".join(ep.attrs)) in exc - ) - if not include_user: - logger.debug( - "Skipping plugin %s: Excluded by user", plugin_name - ) - else: - logger.debug("Loading plugin %s", plugin_name) - self._plugins.append(str(ep)) - yield ep - - def load_plugins(self, *args, **kwargs): - """ - Load the plugins for the psyplot_gui MainWindow - - Returns - ------- - dict - A mapping from entry point name to the imported widget class - - Notes - ----- - ``*args`` and ``**kwargs`` are ignored - """ - - def format_ep(ep): - return "%s:%s:%s" % (ep.module_name, ":".join(ep.attrs), ep.name) - - return { - format_ep(ep): ep.load() for ep in self._load_plugin_entrypoints() - } - - -#: :class:`dict` with default values and validation functions -defaultParams = { - # gui settings - "backend": [ - "psyplot", - try_and_error(validate_str, validate_none), - "Backend to use when using the graphical user interface. The current " - "backend is used and no changes are made. Note that it is usually not " - "possible to change the backend after importing the psyplot.project " - "module. The default backend embeds the figures into the ", - ], - "help_explorer.use_webengineview": [ - True, - validate_bool, - "Enable the PyQt5.QtWebEngineWidgets.QWebEngineView which might not " - "work under certain circumstances.", - ], - "help_explorer.use_intersphinx": [ - None, - validate_bool_maybe_none, - "Use the intersphinx extension and link to the online documentations " - "of matplotlib, pyplot, psyplot, numpy, etc. when converting rst " - "docstrings. The inventories are loaded when the first object is " - "documented. If None, intersphinx is only used when " - "`help_explorer.online` is True and you are not using windows", - ], - "help_explorer.render_docs_parallel": [ - True, - validate_bool, - "Boolean whether the html docs are rendered in a separate process", - ], - "help_explorer.online": [ - None, - validate_bool_maybe_none, - "Switch that controls whether the online functions of the help " - "explorer shall be enabled. False implies that " - "help_explorer.use_intersphinx is set to False", - ], - "console.start_channels": [ - True, - validate_bool, - "Start the different channels of the KernelClient", - ], - "console.connect_to_help": [ - True, - validate_bool, - "Whether the console shall be connected to the help_explorer or not", - ], - "console.auto_set_mp": [ - True, - validate_bool, - "If True, then the 'mp' variable in the console is automatically set " - "when the current main project changes", - ], - "console.auto_set_sp": [ - True, - validate_bool, - "If True, then the 'sp' variable in the console is automatically set " - "when the current sub project changes", - ], - "main.open_files_port": [ - 30124, - validate_int, - "The port number used when new files are opened", - ], - "main.listen_to_port": [ - True, - validate_bool, - "If True and the psyplot gui is already running, new files are opened " - "in that gui", - ], - "main.opengl": [ - "software", - validate_str, - "The opengl implementation to use. Should be one of 'software', " - "'desktop', 'gles' or 'automatic'.", - ], - "content.load_tooltips": [ - True, - validate_bool, - "If True, a lazy load is performed on the arrays and data sets and " - "their string representation is displayed as tool tip. This part of " - "the data into memory. It is recommended to set this to False for " - "remote data.", - ], - "fmt.sort_by_key": [ - True, - validate_bool, - "If True, the formatoptions in the Formatoptions widget are sorted by " - "their formatoption key rather than by their name.", - ], - "plugins.include": [ - None, - try_and_error(validate_none, validate_stringlist), - "The plugins to load. Can be either None to load all that are not " - "explicitly excluded by the 'plugins.exclude' key or a list of " - "plugins to include. List items can be either module names, plugin " - "names or the module name and widget via ':'", - ], - "plugins.exclude": [ - [], - try_and_error(validate_all, validate_stringlist), - "The plugins to exclude from loading. Can be either 'all' to exclude " - "all plugins or a list like in 'plugins.include'.", - ], -} - -#: :class:`~psyplot.config.rcsetup.RcParams` instance that stores default -#: formatoptions and configuration settings. -rcParams = GuiRcParams(defaultParams=defaultParams) -rcParams.update({key: val[0] for key, val in defaultParams.items()}) -rcParams.load_from_file() diff --git a/psyplot_gui/console.py b/psyplot_gui/console.py deleted file mode 100644 index 3734134..0000000 --- a/psyplot_gui/console.py +++ /dev/null @@ -1,391 +0,0 @@ -""" -An example of opening up an RichJupyterWidget in a PyQT Application, this can -execute either stand-alone or by importing this file and calling -inprocess_qtconsole.show(). -Based on the earlier example in the IPython repository, this has -been updated to use qtconsole. -""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -import logging -import re -import sys - -import ipykernel -import psyplot -import psyplot.project as psy -from psyplot.docstring import docstrings -from qtconsole.inprocess import QtInProcessKernelManager -from tornado import ioloop -from zmq.eventloop import ioloop as zmq_ioloop - -import psyplot_gui -from psyplot_gui import rcParams -from psyplot_gui.common import DockMixin, StreamToLogger -from psyplot_gui.compat.qtcompat import ( - QKeySequence, - Qt, - QtCore, - QTextCursor, - QTextEdit, - asstring, - with_qt5, -) - -try: - from qtconsole.inprocess import QtInProcessRichJupyterWidget -except ImportError: - from qtconsole.rich_jupyter_widget import ( - RichJupyterWidget as QtInProcessRichJupyterWidget, - ) - - -#: HACK: Boolean that is True if the prompt should be used. This unfortunately -#: is necessary for qtconsole >= 4.3 when running the tests -_with_prompt = True - - -modules2import = [ - ("psyplot.project", "psy"), - ("xarray", "xr"), - ("pandas", "pd"), - ("numpy", "np"), -] - -symbols_patt = re.compile(r"[^\'\"a-zA-Z0-9_.]") - - -logger = logging.getLogger(__name__) - - -def init_asyncio_patch(): - """set default asyncio policy to be compatible with tornado - Tornado 6 (at least) is not compatible with the default - asyncio implementation on Windows - Pick the older SelectorEventLoopPolicy on Windows - if the known-incompatible default policy is in use. - do this as early as possible to make it a low priority and overrideable - ref: https://github.com/tornadoweb/tornado/issues/2608 - FIXME: if/when tornado supports the defaults in asyncio, - remove and bump tornado requirement for py38 - """ - if sys.platform.startswith("win") and sys.version_info >= (3, 8): - import asyncio - - try: - from asyncio import ( - WindowsProactorEventLoopPolicy, - WindowsSelectorEventLoopPolicy, - ) - except ImportError: - pass - # not affected - else: - if ( - type(asyncio.get_event_loop_policy()) - is WindowsProactorEventLoopPolicy - ): - # WindowsProactorEventLoopPolicy is not compatible with tornado 6 - # fallback to the pre-3.8 default of Selector - asyncio.set_event_loop_policy(WindowsSelectorEventLoopPolicy()) - - -class IPythonControl(QTextEdit): - """A modified control to show the help of objects in the help explorer""" - - def keyPressEvent(self, event): - """Reimplement Qt Method - Basic keypress event handler""" - key = event.key() - if key == Qt.Key_Question or key == Qt.Key_ParenLeft: - self.parentWidget().show_current_help() - elif key == Qt.Key_I and (event.modifiers() & Qt.ControlModifier): - self.parentWidget().show_current_help(True, True) - # Let the parent widget handle the key press event - QTextEdit.keyPressEvent(self, event) - - -class ConsoleWidget(QtInProcessRichJupyterWidget, DockMixin): - """A console widget to access an inprocess shell""" - - custom_control = IPythonControl - - dock_position = Qt.RightDockWidgetArea - - title = "Console" - - rc = rcParams.find_and_replace("console.", pattern_base=r"console\.") - - intro_msg = "" - - run_script = QtCore.pyqtSignal(list) - - run_command = QtCore.pyqtSignal(list) - - _closed = True - - def __init__(self, main, *args, **kwargs): - """ - Parameters - ---------- - help_explorer: psyplot_gui.help_explorer.HelpExplorer or None - A widget that can be used to show the documentation of an object - ``*args,**kwargs`` - Any other keyword argument for the - :class:`qtconsole.rich_jupyter_widget.RichJupyterWidget` - """ - self._closed = False - - # Create an in-process kernel - # >>> print_process_id() - # will print the same process ID as the main process - init_asyncio_patch() - - kernel_manager = QtInProcessKernelManager() - # on windows, sys.stdout may be None when using pythonw.exe. Therefore - # we just us a StringIO for security - orig_stdout = sys.stdout - if sys.stdout is None: - sys.stdout = StreamToLogger(logger) - orig_stderr = sys.stderr - if sys.stderr is None: - sys.stderr = StreamToLogger(logger) - kernel_manager.start_kernel(show_banner=False) - if ipykernel.__version__ < "5.1.1": - # monkey patch to fix - # https://github.com/ipython/ipykernel/issues/370 - def _abort_queues(kernel): - pass - - kernel_manager.kernel._abort_queues = _abort_queues - sys.stdout = orig_stdout - sys.stderr = orig_stderr - kernel = kernel_manager.kernel - kernel.gui = "qt4" if not with_qt5 else "qt" - - kernel_client = kernel_manager.client() - if rcParams["console.start_channels"]: - kernel_client.start_channels() - - self.help_explorer = kwargs.pop("help_explorer", None) - - super(ConsoleWidget, self).__init__(*args, parent=main, **kwargs) - - self.intro_msg = ( - docstrings.dedent( - """ - psyplot version: %s - - gui version: %s - - The console provides you the full access to the current project and - plots. - To make your life easier, the following modules have been imported - - - %s - - Furthermore, each time you change the selection or the content in the - plot objects viewer, the `sp` (the selection) and `mp` (all arrays) - variables in the console are adjusted. To disable this behaviour, set:: - - >>> import psyplot_gui - >>> psyplot_gui.rcParams["console.auto_set_mp"] = False - >>> psyplot_gui.rcParams["console.auto_set_sp"] = False - - To inspect and object in the console and display it's documentation in - the help explorer, type 'Ctrl + I' or a '?' after the object""" - ) - % ( - psyplot.__version__, - psyplot_gui.__version__, - "\n - ".join("%s as %s" % t for t in modules2import), - ) - ) - - self.kernel_manager = kernel_manager - self.kernel_client = kernel_client - - self.run_command_in_shell( - "\n".join("import %s as %s" % t for t in modules2import) - ) - self.exit_requested.connect(self._close_mainwindow) - self.exit_requested.connect(QtCore.QCoreApplication.instance().quit) - - # we overwrite the short cut here because the 'Ctrl+S' shortcut is - # reserved for mainwindows save action - try: - main.register_shortcut( - self.export_action, - QKeySequence("Ctrl+Alt+S", QKeySequence.NativeText), - ) - except AttributeError: - pass - - psy.Project.oncpchange.connect(self.update_mp) - psy.Project.oncpchange.connect(self.update_sp) - - self.run_script.connect(self._run_script_in_shell) - self.run_command.connect(self._run_command_in_shell) - - # HACK: we set the IOloop for the InProcessKernel here manually without - # starting it (not necessary because QApplication has a blocking - # IOLoop). However, we need this because the ZMQInteractiveShell wants - # to call - # loop = self.kernel.io_loop - # loop.call_later(0.1, loop.stop)`` - zmq_ioloop.install() - self.kernel_manager.kernel.io_loop = ioloop.IOLoop.current() - - def update_mp(self, project): - """Update the `mp` variable in the shell is - ``rcParams['console.auto_set_mp']`` with a main project""" - if self.rc["auto_set_mp"] and project is not None and project.is_main: - try: - self.run_command_in_shell("mp = psy.gcp(True)") - except RuntimeError: - # probably running a script that via IPythons `run` magick - pass - - def update_sp(self, project): - """Update the `sp` variable in the shell is - ``rcParams['console.auto_set_sp']`` with a sub project""" - if self.rc["auto_set_sp"] and (project is None or not project.is_main): - try: - self.run_command_in_shell("sp = psy.gcp()") - except RuntimeError: - # probably running a script that via IPythons `run` magick - pass - - def show_current_help(self, to_end=False, force=False): - """Show the help of the object at the cursor position if - ``rcParams['console.connect_to_help']`` is set""" - if not force and not self.rc["connect_to_help"]: - return - obj_text = self.get_current_object(to_end) - if obj_text is not None and self.help_explorer is not None: - found, obj = self.get_obj(obj_text) - if found: - self.help_explorer.show_help(obj, obj_text) - self._control.setFocus() - - def get_obj(self, obj_text): - """ - Get the object from the shell specified by `obj_text` - - Parameters - ---------- - obj_text: str - The name of the variable as it is stored in the shell - - Returns - ------- - bool - True, if the object could be found - object or None - The requested object or None if it could not be found""" - info = self.kernel_manager.kernel.shell._object_find(obj_text) - if info.found: - return True, info.obj - else: - return False, None - - def get_current_object(self, to_end=False): - """Get the name of the object at cursor position""" - c = self._control - if not _with_prompt: - try: # qtconsole >4.3 uses the _prompt_cursor attribute - cursor = self._prompt_cursor - except AttributeError: - cursor = c.textCursor() - else: - cursor = c.textCursor() - curr = cursor.position() - start = curr - cursor.positionInBlock() - txt = c.toPlainText()[start:curr] - eol = "" - if to_end: - cursor.movePosition(QTextCursor.EndOfBlock) - end = cursor.position() - if end > curr: - eol = c.toPlainText()[curr:end] - m = symbols_patt.search(eol) - if m: - eol = eol[: m.start()] - - if not txt: - return txt - txt = asstring(txt) - txt = txt.rsplit("\n", 1)[-1] - txt_end = "" - for startchar, endchar in ["[]", "()"]: - if txt.endswith(endchar): - pos = txt.rfind(startchar) - if pos: - txt_end = txt[pos:] - txt = txt[:pos] - tokens = symbols_patt.split(txt) - token = None - try: - while token is None or symbols_patt.match(token): - token = tokens.pop() - if token.endswith("."): - token = token[:-1] - if token.startswith("."): - # Invalid object name - return None - token += txt_end - if token: - return token + eol - except IndexError: - return None - - def _run_script_in_shell(self, args): - self.run_script_in_shell(args[0][0]) - - def run_script_in_shell(self, script): - """Run a script in the shell""" - self.kernel_manager.kernel.shell.run_line_magic("run", script) - - def _run_command_in_shell(self, args): - # 0: filenames - # 1: project - # 2: command - self.run_command_in_shell(args[2]) - - def run_command_in_shell(self, code, *args, **kwargs): - """Run a script in the shell""" - ret = self.kernel_manager.kernel.shell.run_code(code, *args, **kwargs) - import IPython - - if IPython.__version__ < "7.0": # run_code is an asyncio.coroutine - return ret - else: - import asyncio - - gathered = asyncio.gather(ret) - loop = asyncio.get_event_loop() - ret = loop.run_until_complete(gathered) - return ret[0] - - def _close_mainwindow(self): - from psyplot_gui.main import mainwindow - - if mainwindow is not None: - mainwindow.close() - else: - self.close() - - def close(self): - if self.kernel_client.channels_running: - self.kernel_client.stop_channels() - self._closed = True - return super(ConsoleWidget, self).close() - - def eventFilter(self, *args, **kwargs): - if self._closed: - return False - return super().eventFilter(*args, **kwargs) diff --git a/psyplot_gui/content_widget.py b/psyplot_gui/content_widget.py deleted file mode 100644 index 32d93ff..0000000 --- a/psyplot_gui/content_widget.py +++ /dev/null @@ -1,775 +0,0 @@ -# -*- coding: utf-8 -*- -"""Module containing the project content widget to display the selection - -This module redefines the :class:`psyplot.project.Project` class with -additional features for an interactive usage with graphical qt user interface. -There is no need to import this module because the -:class:`GuiProject` class defined here replaces the project class in the -:mod:`psyplot.project` module.""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -import os.path as osp -import re -import sys -import weakref -from itertools import chain -from xml.sax.saxutils import escape - -import sip -import six -from psyplot.config.rcsetup import safe_list -from psyplot.data import ArrayList, InteractiveList -from psyplot.project import Project, gcp, scp -from psyplot.utils import _TempBool - -from psyplot_gui import rcParams -from psyplot_gui.common import DockMixin -from psyplot_gui.compat.qtcompat import ( - QAbstractItemView, - QAction, - QHBoxLayout, - QListWidget, - QListWidgetItem, - QMenu, - QPushButton, - Qt, - QtCore, - QToolBox, - QTreeWidget, - QTreeWidgetItem, - QVBoxLayout, - QWidget, -) - -html_escape_table = {'"': """, "'": "'"} - - -def escape_html(s): - return escape(s, html_escape_table) - - -class ArrayItem(QListWidgetItem): - """A listwidget item that takes it's informations from a given array""" - - #: The :class:`psyplot.data.InteractiveList` or - #: :class:`psyplot.data.InteractiveArray` instance - arr = None - - def __init__(self, ref, *args, **kwargs): - """ - Parameters - ---------- - ref: weakref - The weak reference to the array to display - ``*args,**kwargs`` - Are determined by the parent class - """ - arr = ref() - super(ArrayItem, self).__init__(arr._short_info(), **kwargs) - self.arr = ref - # make sure that the item is updated when the array changes - arr.onupdate.connect(self.set_text_from_array) - self.set_text_from_array() - - def set_text_from_array(self): - """Set the text and tooltop from the - :meth:`psyplot.data.InteractiveArray._short_info` and __str__ methods - """ - if not sip.isdeleted(self): - self.setText(self.arr()._short_info()) - if rcParams["content.load_tooltips"]: - if isinstance(self.arr(), InteractiveList): - self.setToolTip(str(self.arr())) - else: - self.setToolTip(str(self.arr().arr)) - else: - self.disconnect_from_array() - - def disconnect_from_array(self): - arr = self.arr() - if arr is not None: - arr.onupdate.disconnect(self.set_text_from_array) - del self.arr - - -class PlotterList(QListWidget): - """QListWidget showing multiple ArrayItems of one Plotter class""" - - #: str. The name of the attribute of the :class:`psyplot.project.Project` - #: class - project_attribute = None - - #: boolean. True if the current project does not contain any arrays in the - #: attribute identified by the :attr:`project_attribute` - is_empty = True - - _no_project_update = _TempBool() - - updated_from_project = QtCore.pyqtSignal(QListWidget) - - # Determine whether the plotter could be loaded - can_import_plotter = True - - @property - def arrays(self): - """List of The InteractiveBase instances in this list""" - return ArrayList( - [ - getattr(item.arr(), "arr", item.arr()) - for item in self.array_items - ] - ) - - @property - def array_items(self): - """Iterable of :class:`ArrayItem` items in this list""" - return filter( - lambda i: i is not None, map(self.item, range(self.count())) - ) - - def __init__(self, plotter_type=None, *args, **kwargs): - """ - Parameters - ---------- - plotter_type: str or None - If str, it mus be an attribute name of the - :class:`psyplot.project.Project` class. Otherwise the full project - is used - ``*args,**kwargs`` - Are determined by the parent class - - Notes - ----- - When initialized, the content of the list is determined by - ``gcp(True)`` and ``gcp()``""" - super(PlotterList, self).__init__(*args, **kwargs) - self.project_attribute = plotter_type - self.setSelectionMode(QAbstractItemView.MultiSelection) - self.itemSelectionChanged.connect(self.update_cp) - self.update_from_project(gcp(True)) - self.update_from_project(gcp()) - - def update_from_project(self, project): - """Update the content from the given Project - - Parameters - ---------- - project: psyplot.project.Project - If the project is a main project, new items will be added. - Otherwise only the current selection changes""" - if self._no_project_update: - return - if not self.can_import_plotter: - # remove the current items - self.disconnect_items() - return - attr = self.project_attribute - # stop if the module of the plotter has not yet been imported - if attr and Project._registered_plotters[attr][0] not in sys.modules: - return - try: - arrays = project if not attr else getattr(project, attr) - mp = gcp(True) if project is None else project.main - main_arrays = mp if not attr else getattr(mp, attr) - except ImportError: # plotter could not be loaded - self.is_empty = True - self.can_import_plotter = False - return - self.is_empty = not bool(main_arrays) - with self._no_project_update: - if project is None: - for item in self.array_items: - item.setSelected(False) - elif project.is_main: - old_arrays = self.arrays - # remove outdated items - i = 0 - for arr in old_arrays: - if arr not in arrays: - item = self.takeItem(i) - item.disconnect_from_array() - else: - i += 1 - # add new items - for arr in arrays: - if arr not in old_arrays: - item = ArrayItem(weakref.ref(arr.psy), parent=self) - self.addItem(item) - # resort to match the project - for arr in reversed(main_arrays): - for i, item in enumerate(self.array_items): - if item.arr() is arr.psy: - self.insertItem(0, self.takeItem(i)) - cp = gcp() - for item in self.array_items: - item.setSelected(getattr(item.arr(), "arr", item.arr()) in cp) - self.updated_from_project.emit(self) - - def update_cp(self, *args, **kwargs): - """Update the current project from what is selected in this list""" - if not self._no_project_update: - mp = gcp(True) - sp = gcp() - selected = [item.arr().arr_name for item in self.selectedItems()] - arrays = self.arrays - other_selected = [ - arr.psy.arr_name for arr in sp if arr not in arrays - ] - with self._no_project_update: - scp(mp(arr_name=selected + other_selected)) - - def disconnect_items(self): - """Disconnect the items in this list from the arrays""" - for item in list(self.array_items): - item.disconnect_from_array() - self.takeItem(self.indexFromItem(item).row()) - self.is_empty = True - - -class ProjectContent(QToolBox): - """Display the content in the current project - - This toolbox contains several :class:`PlotterList` that show the content - of the current main and subproject""" - - #: :class:`dict` containing the :class:`PlotterList` instances - #: of the different selection attributes - lists = dict() - - @property - def current_names(self): - return [self.itemText(i) for i in range(self.count())] - - def __init__(self, *args, **kwargs): - super(ProjectContent, self).__init__(*args, **kwargs) - self.lists = dict() - for attr in chain(["All"], sorted(Project._registered_plotters)): - item = self.add_plotterlist(attr, force=(attr == "All")) - self.lists[attr] = item - self.currentChanged.connect(self.update_current_list) - Project.oncpchange.connect(self.update_lists) - - def enable_list(self, list_widget): - """Enable a given list widget based upon whether it is empty or not""" - i = self.indexOf(list_widget) - if i != -1: - self.setItemEnabled(i, not list_widget.is_empty) - - def add_plotterlist(self, identifier, force=False): - """Create a :class:`PlotterList` from an identifier from the - :class:`psyplot.project.Project` class""" - attr = identifier if identifier != "All" else None - item = PlotterList(attr) - if not item.can_import_plotter: - return item - if force or not item.is_empty: - item.setParent(self) - item.updated_from_project.connect(self.enable_list) - self.addItem(item, identifier) - i = self.indexOf(item) - self.setItemEnabled(i, not item.is_empty) - return item - - def update_current_list(self): - """Update the current list from the current main and sub project""" - self.currentWidget().update_from_project(gcp(True)) - self.currentWidget().update_from_project(gcp()) - - def update_lists(self, p): - # check new lists - current_items = self.current_names - for name, l in self.lists.items(): - if not p.is_main: - l.update_from_project(p.main) - l.update_from_project(p) - if l.is_empty: - l.disconnect_items() - if name != "All" and l.is_empty: - i = self.indexOf(l) - self.removeItem(i) - elif not l.is_empty and name not in current_items: - self.addItem(l, name) - - -class SelectAllButton(QPushButton): - """A button to select all data objects in the current main project""" - - def __init__(self, *args, **kwargs): - super(SelectAllButton, self).__init__(*args, **kwargs) - self.setToolTip( - "Click to select all data arrays in the entire project" - ) - self.clicked.connect(self.select_all) - Project.oncpchange.connect(self.enable_from_project) - - def select_all(self): - """Select all arrays""" - scp(gcp(True)[:]) - - def enable_from_project(self, project): - """Enable the button if the given project is not empty""" - self.setEnabled(bool(project.main if project is not None else gcp(1))) - - -class SelectNoneButton(QPushButton): - """A button to select no data objects in the current main project""" - - def __init__(self, *args, **kwargs): - super(SelectNoneButton, self).__init__(*args, **kwargs) - self.setToolTip("Click to deselect all data arrays") - self.clicked.connect(self.select_none) - Project.oncpchange.connect(self.enable_from_project) - - def select_none(self): - """Clear current subproject""" - scp(gcp(True)[:0]) - - def enable_from_project(self, project): - """Enable the button if the given project is not empty""" - self.setEnabled(bool(project)) - - -class ProjectContentWidget(QWidget, DockMixin): - """A combination of selection buttons and the ProjectContent""" - - def __init__(self, *args, **kwargs): - super(ProjectContentWidget, self).__init__(*args, **kwargs) - vbox = QVBoxLayout() - # create buttons for unselecting and selecting all arrays - self.unselect_button = SelectNoneButton("Unselect all", parent=self) - self.select_all_button = SelectAllButton("Select all", parent=self) - button_hbox = QHBoxLayout() - button_hbox.addWidget(self.unselect_button) - button_hbox.addWidget(self.select_all_button) - mp = gcp(True) - self.unselect_button.setEnabled(bool(mp)) - self.select_all_button.setEnabled(bool(mp)) - # create widget showing the content of the current project - self.content_widget = ProjectContent(parent=self) - vbox.addLayout(button_hbox) - vbox.addWidget(self.content_widget) - self.setLayout(vbox) - - -class DatasetTreeItem(QTreeWidgetItem): - """A QTreeWidgetItem showing informations on one dataset in the main - project""" - - def __init__(self, ds, columns=[], *args, **kwargs): - super(DatasetTreeItem, self).__init__(*args, **kwargs) - self.variables = variables = QTreeWidgetItem(0) - self.columns = columns - variables.setText(0, "variables (%i)" % len(ds)) - self.coords = coords = QTreeWidgetItem(0) - coords.setText(0, "coords (%i)" % len(ds.coords)) - self.attrs = attrs = QTreeWidgetItem(0) - attrs.setText(0, "Global Attributes (%i)" % len(ds.attrs)) - self.addChildren([variables, coords]) - self.addChild(variables) - self.addChild(attrs) - self.add_variables(ds) - self.add_attrs(ds.attrs) - - def add_variables(self, ds=None): - """Add children of variables and coords to this TreeWidgetItem""" - if ds is None: - ds = self.ds() - self.variables.takeChildren() - self.coords.takeChildren() - else: - self.ds = weakref.ref(ds) - columns = self.columns - variables = self.variables - coords = self.coords - for vname, variable in six.iteritems(ds.variables): - item = QTreeWidgetItem(0) - item.setText(0, str(vname)) - for i, attr in enumerate(columns, 1): - if attr == "dims": - item.setText(i, ", ".join(variable.dims)) - else: - item.setText( - i, - str( - variable.attrs.get( - attr, getattr(variable, attr, "") - ) - ), - ) - if vname in ds.coords: - coords.addChild(item) - else: - variables.addChild(item) - if rcParams["content.load_tooltips"]: - item.setToolTip( - 0, "
" + escape_html(str(variable)) + "
" - ) - - # Add shape - shape_item = QTreeWidgetItem(0) - shape_item.setText(0, "shape") - shape_item.setText(1, str(variable.shape)) - item.addChild(shape_item) - - # Add dimensions - dims_item = QTreeWidgetItem(0) - dims_item.setText(0, "dims") - dims_item.setText(1, ", ".join(variable.dims)) - item.addChild(dims_item) - - # add open plots - plots_item = QTreeWidgetItem(0) - plots_item.setText(0, "Plots") - self.refresh_plots_item(plots_item, vname) - item.addChild(plots_item) - - # add variable attribute - attrs_item = QTreeWidgetItem(0) - attrs_item.setText(0, "Attributes") - self.add_attrs(variable.attrs, attrs_item) - item.addChild(attrs_item) - - # add variable encoding - encoding_item = QTreeWidgetItem(0) - encoding_item.setText(0, "Encoded attributes") - self.add_attrs(variable.encoding, encoding_item) - item.addChild(encoding_item) - - def get_plots_item(self, item): - for child in map(item.child, range(item.childCount())): - if child.text(0) == "Plots": - return child - - def refresh_plots_item(self, item, vname, mp=None, sp=None): - expand = item.isExpanded() - item.takeChildren() - try: - num = self.ds().psy.num - except AttributeError: - return - if mp is None: - mp = gcp(True) - if sp is None: - sp = gcp() - for i in range(len(mp)): - sub = mp[i : i + 1] - array_info = sub.array_info(ds_description={"arr", "num"}) - arrs = sub._get_ds_descriptions(array_info).get(num, {}) - if arrs and any( - vname in arr.psy.base_variables for arr in arrs["arr"] - ): - child = QTreeWidgetItem(0) - prefix = "*" if sub[0] in sp else "" - text = sub[0].psy._short_info() - child.setText(0, prefix + text) - child.setToolTip(0, text) - item.addChild(child) - if expand and item.childCount(): - item.setExpanded(True) - - def add_attrs(self, attrs=None, item=None): - if attrs is None: - attrs = self.ds().attrs - self.attrs.takeChildren() - if item is None: - item = self.attrs - for key, val in attrs.items(): - child = QTreeWidgetItem(0) - child.setText(0, key) - child.setText(1, str(val)) - child.setToolTip(1, "{}: {}".format(key, str(val))) - item.addChild(child) - - -class DatasetTree(QTreeWidget, DockMixin): - """A QTreeWidget showing informations on all datasets in the main project""" - - tooltips = { - "Refresh": "Refresh the selected dataset", - "Refresh all": "Refresh all datasets", - "Add to project": ( - "Add this variable or a plot of it to the current " "project" - ), - } - - def __init__(self, *args, **kwargs): - super(DatasetTree, self).__init__(*args, **kwargs) - self.create_dataset_tree() - self.itemExpanded.connect(self.load_variable_desc) - self.setContextMenuPolicy(Qt.CustomContextMenu) - self.customContextMenuRequested.connect(self.open_menu) - Project.oncpchange.connect(self.add_datasets_from_cp) - self.hideColumn(1) - - @staticmethod - def is_variable(item): - return re.match(r"variables \(\d+\)", item.parent().text(0)) - - @staticmethod - def is_coord(item): - return re.match(r"coords\(\d+\)", item.parent().text(0)) - - def load_variable_desc(self, item): - parent = item.parent() - if ( - parent is self - or parent is None - or not (self.is_variable(item) or self.is_coord(item)) - ): - return - if self.isColumnHidden(1): - self.showColumn(1) - self.resizeColumnToContents(0) - - top = item - while top.parent() and top.parent() is not self: - top = top.parent() - ds = top.ds() - if ds is None: - return - desc = escape_html(str(ds.variables[item.text(0)])) - item.setToolTip(0, "
" + desc + "
") - - def create_dataset_tree(self): - """Set up the columns and insert the :class:`DatasetTreeItem` - instances from the current project""" - self.set_columns() - self.add_datasets_from_cp(gcp()) - - def set_columns(self, columns=["Value"]): - """Set up the columns in the DatasetTree. - - Parameters - ---------- - columns: list of str - A list of netCDF attributes that shall be shown in columns""" - self.setColumnCount(len(columns) + 1) - if columns: - self.setHeaderHidden(False) - self.setHeaderLabels(["Dataset"] + list(columns)) - else: - self.setHeaderHidden(True) - self.attr_columns = columns - - def expanded_items(self): - "Create a mapping from dataset numbers to variables that are expanded." - ret = {} - for item in map(self.topLevelItem, range(self.topLevelItemCount())): - if item.isExpanded() and item.ds() is not None: - ds = item.ds() - ret[ds.psy.num] = d = {} - for child in map(item.child, range(item.childCount())): - if child.childCount() and child.isExpanded(): - d[child.text(0)] = variables = [] - for vchild in map( - child.child, range(child.childCount()) - ): - if vchild.childCount() and vchild.isExpanded(): - variables.append(vchild.text(0)) - return ret - - def add_datasets_from_cp(self, project=None): - """Clear the tree and add the datasets based upon the given `project` - - Parameters - ---------- - project: psyplot.project.Project - The project containing the data array. If the project is not a main - project, it's main project is used. - """ - if project is None: - project = gcp(True) - sp_arrs = ArrayList().arrays - elif project.is_main: - sp_arrs = gcp().arrays - else: - sp_arrs = project.arrays - project = project.main - - expanded_items = self.expanded_items() - # remove items from the tree - self.clear() - for i, ds_desc in six.iteritems( - project._get_ds_descriptions( - project.array_info(ds_description="all") - ) - ): - top_item = DatasetTreeItem(ds_desc["ds"], self.attr_columns, 0) - if ds_desc["fname"] is not None and not all( - s is None for s in ds_desc["fname"] - ): - ds_desc["fname"] = ", ".join( - map(osp.basename, safe_list(ds_desc["fname"])) - ) - else: - ds_desc["fname"] = None - top_item.setText( - 0, - "%s%i: %s" - % ( - "*" - if any( - any(arr is arr2 for arr2 in sp_arrs) - for arr in ds_desc["arr"] - ) - else "", - i, - ds_desc["fname"], - ), - ) - for arr in ds_desc["arr"]: - arr.psy.onbasechange.connect(self.add_datasets_from_cp) - self.addTopLevelItem(top_item) - self.expand_items(expanded_items) - - def expand_items(self, expanded_items): - """Expand tree items - - Parameters - ---------- - expanded_items: dict - A mapping as returned by the :meth:`expanded_items` method""" - for top in map(self.topLevelItem, range(self.topLevelItemCount())): - ds = top.ds() - if ds.psy.num in expanded_items: - self.expandItem(top) - d = expanded_items[ds.psy.num] - for child in map(top.child, range(top.childCount())): - if child.text(0) in d: - self.expandItem(child) - for vchild in map( - child.child, range(child.childCount()) - ): - if vchild.text(0) in d[child.text(0)]: - self.expandItem(vchild) - - def open_menu(self, pos): - menu = QMenu() - item = self.itemAt(pos) - parent, item_type, vname = self._get_toplevel_item(item) - # ---- Refresh the selected item action - refresh_action = QAction("Refresh", self) - refresh_action.setToolTip(self.tooltips["Refresh"]) - refresh_action.triggered.connect(lambda: self.refresh_items(parent)) - - # ---- Refresh all items action - refresh_all_action = QAction("Refresh all", self) - refresh_all_action.setToolTip(self.tooltips["Refresh all"]) - refresh_all_action.triggered.connect(lambda: self.refresh_items()) - - # ---- add refresh actions - menu.addActions([refresh_action, refresh_all_action]) - - # ---- add plot option - if item_type == "variable": - add2p_action = QAction(f"Add new plot of {vname}", self) - add2p_action.setToolTip(self.tooltips["Add to project"]) - add2p_action.triggered.connect( - lambda: self.make_plot(parent.ds(), item.text(0), True) - ) - menu.addSeparator() - menu.addAction(add2p_action) - - # ---- show menu - menu.exec_(self.mapToGlobal(pos)) - return menu - - def refresh_items(self, item=None): - if item is not None: - item.add_variables() - else: - for item in map( - self.topLevelItem, range(self.topLevelItemCount()) - ): - item.add_variables() - - def make_plot(self, ds, name, exec_=None): - from psyplot_gui.main import mainwindow - - mainwindow.new_plots() - mainwindow.plot_creator.switch2ds(ds) - mainwindow.plot_creator.insert_array(safe_list(name)) - if exec_: - mainwindow.plot_creator.exec_() - - def _get_toplevel_item(self, item): - if item is None: - parent = None - else: - parent = item.parent() - item_type = None - vname = None - while parent is not None: - if self.is_variable(item): - vname = item.text(0) - item_type = "variable" - elif self.is_coord(item): - vname = item.text(0) - item_type = "coord" - item = item.parent() - parent = item.parent() - return item, item_type, vname - - -class FiguresTreeItem(QTreeWidgetItem): - """An item displaying the information on a data object in one figure""" - - def __init__(self, ref, *args, **kwargs): - """ - Parameters - ---------- - ref: weakref - The weak reference to the array containing the data""" - super(FiguresTreeItem, self).__init__(*args, **kwargs) - self.arr = ref - self.set_text_from_array() - ref().psy.onupdate.connect(self.set_text_from_array) - - def set_text_from_array(self): - """Set the text and tooltop from the - :meth:`psyplot.data.InteractiveArray._short_info` and __str__ methods - """ - self.setText(0, self.arr().psy._short_info()) - if rcParams["content.load_tooltips"]: - self.setToolTip(0, str(self.arr())) - - def disconnect_from_array(self): - """Disconect this item from the corresponding array""" - arr = self.arr() - if arr is not None: - arr.psy.onupdate.disconnect(self.set_text_from_array) - del self.arr - - -class FiguresTree(QTreeWidget, DockMixin): - """A tree widget sorting the arrays by their figure - - This widget uses the current sub and main project to show the open figures - """ - - def __init__(self, *args, **kwargs): - super(FiguresTree, self).__init__(*args, **kwargs) - self.setHeaderLabel("Figure") - Project.oncpchange.connect(self.add_figures_from_cp) - self.add_figures_from_cp(gcp(True)) - - def add_figures_from_cp(self, project): - """Add the items in this tree based upon the figures in the given - project""" - if project is None or not project.is_main: - return - for item in map(self.takeTopLevelItem, [0] * self.topLevelItemCount()): - for child in item.takeChildren(): - child.disconnect_from_array() - for fig, arrays in six.iteritems(project.figs): - item = QTreeWidgetItem(0) - item.setText(0, fig.canvas.manager.get_window_title()) - item.addChildren( - [FiguresTreeItem(weakref.ref(arr), 0) for arr in arrays] - ) - self.addTopLevelItem(item) diff --git a/psyplot_gui/dataframeeditor.py b/psyplot_gui/dataframeeditor.py deleted file mode 100644 index f0b18b8..0000000 --- a/psyplot_gui/dataframeeditor.py +++ /dev/null @@ -1,1044 +0,0 @@ -"""A widget to display and edit DataFrames""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -import os -import os.path as osp -from functools import partial - -import numpy as np -import pandas as pd -import six -from psyplot.docstring import docstrings - -from psyplot_gui.common import ( - DockMixin, - LoadFromConsoleButton, - PyErrorMessage, - get_icon, -) -from psyplot_gui.compat.qtcompat import ( - QApplication, - QCheckBox, - QDockWidget, - QFileDialog, - QHBoxLayout, - QHeaderView, - QIcon, - QLabel, - QLineEdit, - QMenu, - QPushButton, - Qt, - QTableView, - QtCore, - QtGui, - QToolButton, - QVBoxLayout, - QWidget, - with_qt5, -) - -if six.PY2: - try: - import CStringIO as io - except ImportError: - import StringIO as io -else: - import io - - -LARGE_SIZE = int(5e5) -LARGE_NROWS = int(1e5) -LARGE_COLS = 60 - -REAL_NUMBER_TYPES = (float, int, np.int64, np.int32) -COMPLEX_NUMBER_TYPES = (complex, np.complex64, np.complex128) - -_bool_false = ["false", "0"] - - -def bool_false_check(value): - """ - Used to convert bool intrance to false since any string in bool('') - will return True - """ - if value.lower() in _bool_false: - value = "" - return value - - -class DataFrameModel(QtCore.QAbstractTableModel): - """DataFrame Table Model""" - - ROWS_TO_LOAD = 500 - COLS_TO_LOAD = 40 - - _format = "%0.6g" - - @docstrings.get_sections(base="DataFrameModel") - @docstrings.dedent - def __init__( - self, df, parent=None, index_editable=True, dtypes_changeable=True - ): - """ - Parameters - ---------- - df: pandas.DataFrame - The data frame that will be shown by this :class:`DataFrameModel` - instance - parent: DataFrameEditor - The editor for the table - index_editable: bool - True if the index should be modifiable by the user - dtypes_changeable: bool - True, if the data types should be modifiable by the user - """ - QtCore.QAbstractTableModel.__init__(self) - self._parent = parent - self.df = df - self.df_index = self.df.index.tolist() - self.df_header = self.df.columns.tolist() - self.total_rows = self.df.shape[0] - self.total_cols = self.df.shape[1] - size = self.total_rows * self.total_cols - self.index_editable = index_editable - self.dtypes_changeable = dtypes_changeable - - # Use paging when the total size, number of rows or number of - # columns is too large - if size > LARGE_SIZE: - self.rows_loaded = self.ROWS_TO_LOAD - self.cols_loaded = self.COLS_TO_LOAD - else: - if self.total_rows > LARGE_NROWS: - self.rows_loaded = self.ROWS_TO_LOAD - else: - self.rows_loaded = self.total_rows - if self.total_cols > LARGE_COLS: - self.cols_loaded = self.COLS_TO_LOAD - else: - self.cols_loaded = self.total_cols - - def get_format(self): - """Return current format""" - # Avoid accessing the private attribute _format from outside - return self._format - - def set_format(self, format): - """Change display format""" - self._format = format - self.reset() - - def bgcolor(self, state): - """Toggle backgroundcolor""" - self.bgcolor_enabled = state > 0 - self.reset() - - def headerData(self, section, orientation, role=Qt.DisplayRole): - """Set header data""" - if role != Qt.DisplayRole: - return None - - if orientation == Qt.Horizontal: - if section == 0: - return six.text_type("Index") - elif isinstance(self.df_header[section - 1], six.string_types): - header = self.df_header[section - 1] - return six.text_type(header) - else: - return six.text_type(self.df_header[section - 1]) - else: - return None - - def get_value(self, row, column): - """Returns the value of the DataFrame""" - # To increase the performance iat is used but that requires error - # handling, so fallback uses iloc - try: - value = self.df.iat[row, column] - except AttributeError: - value = self.df.iloc[row, column] - return value - - def data(self, index, role=Qt.DisplayRole): - """Cell content""" - if not index.isValid(): - return None - if role == Qt.DisplayRole or role == Qt.EditRole: - column = index.column() - row = index.row() - if column == 0: - return six.text_type(self.df_index[row]) - else: - value = self.get_value(row, column - 1) - if isinstance(value, float): - try: - return self._format % value - except (ValueError, TypeError): - # may happen if format = '%d' and value = NaN; - # see issue 4139 - return DataFrameModel._format % value - else: - return six.text_type(value) - - def sort( - self, column, order=Qt.AscendingOrder, return_check=False, report=True - ): - """Overriding sort method""" - try: - ascending = order == Qt.AscendingOrder - if column > 0: - try: - self.df.sort_values( - by=self.df.columns[column - 1], - ascending=ascending, - inplace=True, - kind="mergesort", - ) - except AttributeError: - # for pandas version < 0.17 - self.df.sort( - columns=self.df.columns[column - 1], - ascending=ascending, - inplace=True, - kind="mergesort", - ) - self.update_df_index() - else: - self.df.sort_index(inplace=True, ascending=ascending) - self.update_df_index() - except TypeError: - if report: - self._parent.error_msg.showTraceback( - "Failed to sort column!" - ) - return False if return_check else None - self.reset() - return True if return_check else None - - def flags(self, index): - """Set flags""" - if index.column() == 0 and not self.index_editable: - return Qt.ItemIsEnabled | Qt.ItemIsSelectable - return Qt.ItemFlags( - QtCore.QAbstractTableModel.flags(self, index) | Qt.ItemIsEditable - ) - - def setData(self, index, value, role=Qt.EditRole, change_type=None): - """Cell content change""" - column = index.column() - row = index.row() - - if change_type is not None: - if not self.dtypes_changeable: - return False - try: - value = current_value = self.data(index, role=Qt.DisplayRole) - if change_type is bool: - value = bool_false_check(value) - value = np.asarray(change_type(value)) # to make sure it works - icol = column - 1 - self.df.iloc[:, icol] = self.df.iloc[:, icol].astype( - change_type - ) - except ValueError: - self.df.iloc[row, icol] = self.df.iloc[row, icol].astype( - object - ) - else: - current_value = ( - self.get_value(row, column - 1) - if column - else self.df.index[row] - ) - if isinstance(current_value, bool): - value = bool_false_check(value) - supported_types = ( - (bool,) + REAL_NUMBER_TYPES + COMPLEX_NUMBER_TYPES - ) - if isinstance(current_value, supported_types) or isinstance( - current_value, six.string_types - ): - if column: - try: - self.df.iloc[ - row, column - 1 - ] = current_value.__class__(value) - except ValueError: - self._parent.error_msg.showTraceback( - "Failed to set value with %r!" % value - ) - return False - elif self.index_editable: - index = self.df.index.values.copy() - try: - index[row] = value - except ValueError: - self._parent.error_msg.showTraceback( - "Failed to set value with %r!" % value - ) - return False - self.df.index = pd.Index(index, name=self.df.index.name) - self.update_df_index() - else: - return False - else: - self._parent.error_msg.showTraceback( - "The type of the cell is not a supported type" "" - ) - return False - self._parent.cell_edited.emit(row, column, current_value, value) - return True - - def rowCount(self, index=QtCore.QModelIndex()): - """DataFrame row number""" - if self.total_rows <= self.rows_loaded: - return self.total_rows - else: - return self.rows_loaded - - def can_fetch_more(self, rows=False, columns=False): - if rows: - if self.total_rows > self.rows_loaded: - return True - else: - return False - if columns: - if self.total_cols > self.cols_loaded: - return True - else: - return False - - def fetch_more(self, rows=False, columns=False): - if self.can_fetch_more(rows=rows): - reminder = self.total_rows - self.rows_loaded - items_to_fetch = min(reminder, self.ROWS_TO_LOAD) - self.beginInsertRows( - QtCore.QModelIndex(), - self.rows_loaded, - self.rows_loaded + items_to_fetch - 1, - ) - self.rows_loaded += items_to_fetch - self.endInsertRows() - if self.can_fetch_more(columns=columns): - reminder = self.total_cols - self.cols_loaded - items_to_fetch = min(reminder, self.COLS_TO_LOAD) - self.beginInsertColumns( - QtCore.QModelIndex(), - self.cols_loaded, - self.cols_loaded + items_to_fetch - 1, - ) - self.cols_loaded += items_to_fetch - self.endInsertColumns() - - def columnCount(self, index=QtCore.QModelIndex()): - """DataFrame column number""" - # This is done to implement series - if len(self.df.shape) == 1: - return 2 - elif self.total_cols <= self.cols_loaded: - return self.total_cols + 1 - else: - return self.cols_loaded + 1 - - def update_df_index(self): - """ "Update the DataFrame index""" - self.df_index = self.df.index.tolist() - - def reset(self): - self.beginResetModel() - self.endResetModel() - - def insertRow(self, irow): - """Insert one row into the :attr:`df` - - Parameters - ---------- - irow: int - The row index. If iRow is equal to the length of the - :attr:`df`, the new row will be appended.""" - # reimplemented to fall back to the :meth:`insertRows` method - self.insertRows(irow) - - def insertRows(self, irow, nrows=1): - """Insert a row into the :attr:`df` - - Parameters - ---------- - irow: int - The row index. If `irow` is equal to the length of the - :attr:`df`, the rows will be appended. - nrows: int - The number of rows to insert""" - df = self.df - if not irow: - if not len(df): - idx = 0 - else: - idx = df.index.values[0] - else: - try: - idx = df.index.values[irow - 1 : irow + 1].mean() - except TypeError: - idx = df.index.values[min(irow, len(df) - 1)] - else: - idx = df.index.values[min(irow, len(df) - 1)].__class__(idx) - # reset the index to sort it correctly - idx_name = df.index.name - dtype = df.index.dtype - df.reset_index(inplace=True) - new_idx_name = df.columns[0] - current_len = len(df) - for i in range(nrows): - df.loc[current_len + i, new_idx_name] = idx - df[new_idx_name] = df[new_idx_name].astype(dtype) - if irow < current_len: - changed = df.index.values.astype(float) - changed[current_len:] = irow - 0.5 - df.index = changed - df.sort_index(inplace=True) - df.set_index(new_idx_name, inplace=True, drop=True) - df.index.name = idx_name - self.update_df_index() - self.beginInsertRows( - QtCore.QModelIndex(), - self.rows_loaded, - self.rows_loaded + nrows - 1, - ) - self.total_rows += nrows - self.rows_loaded += nrows - self.endInsertRows() - self._parent.rows_inserted.emit(irow, nrows) - - -class FrozenTableView(QTableView): - """This class implements a table with its first column frozen - For more information please see: - http://doc.qt.io/qt-5/qtwidgets-itemviews-frozencolumn-example.html""" - - def __init__(self, parent): - """Constructor.""" - QTableView.__init__(self, parent) - self.parent = parent - self.setModel(parent.model()) - self.setFocusPolicy(Qt.NoFocus) - self.verticalHeader().hide() - if with_qt5: - self.horizontalHeader().setSectionResizeMode(QHeaderView.Fixed) - else: - self.horizontalHeader().setResizeMode(QHeaderView.Fixed) - - parent.viewport().stackUnder(self) - - self.setSelectionModel(parent.selectionModel()) - for col in range(1, parent.model().columnCount()): - self.setColumnHidden(col, True) - - self.setColumnWidth(0, parent.columnWidth(0)) - self.setHorizontalScrollBarPolicy(Qt.ScrollBarAlwaysOff) - self.setVerticalScrollBarPolicy(Qt.ScrollBarAlwaysOff) - self.show() - self.setVerticalScrollMode(QTableView.ScrollPerPixel) - - self.verticalScrollBar().valueChanged.connect( - parent.verticalScrollBar().setValue - ) - parent.verticalScrollBar().valueChanged.connect( - self.verticalScrollBar().setValue - ) - - def update_geometry(self): - """Update the frozen column size when an update occurs in its parent - table""" - self.setGeometry( - self.parent.verticalHeader().width() + self.parent.frameWidth(), - self.parent.frameWidth(), - self.parent.columnWidth(0), - self.parent.viewport().height() - + self.parent.horizontalHeader().height(), - ) - - def contextMenuEvent(self, event): - """Show the context Menu - - Reimplemented to show the use the contextMenuEvent of the parent""" - self.parent.contextMenuEvent(event) - - -class DataFrameView(QTableView): - """Data Frame view class""" - - @property - def filled(self): - """True if the table is filled with content""" - return bool(self.model().rows_loaded) - - @docstrings.dedent - def __init__(self, df, parent, *args, **kwargs): - """ - Parameters - ---------- - %(DataFrameModel.parameters)s - """ - QTableView.__init__(self, parent) - model = DataFrameModel(df, parent, *args, **kwargs) - self.setModel(model) - self.menu = self.setup_menu() - - self.frozen_table_view = FrozenTableView(self) - self.frozen_table_view.update_geometry() - - self.setHorizontalScrollMode(1) - self.setVerticalScrollMode(1) - - self.horizontalHeader().sectionResized.connect( - self.update_section_width - ) - self.verticalHeader().sectionResized.connect( - self.update_section_height - ) - - self.sort_old = [None] - self.header_class = self.horizontalHeader() - self.header_class.sectionClicked.connect(self.sortByColumn) - self.frozen_table_view.horizontalHeader().sectionClicked.connect( - self.sortByColumn - ) - self.horizontalScrollBar().valueChanged.connect( - lambda val: self.load_more_data(val, columns=True) - ) - self.verticalScrollBar().valueChanged.connect( - lambda val: self.load_more_data(val, rows=True) - ) - - def update_section_width(self, logical_index, old_size, new_size): - """Update the horizontal width of the frozen column when a - change takes place in the first column of the table""" - if logical_index == 0: - self.frozen_table_view.setColumnWidth(0, new_size) - self.frozen_table_view.update_geometry() - - def update_section_height(self, logical_index, old_size, new_size): - """Update the vertical width of the frozen column when a - change takes place on any of the rows""" - self.frozen_table_view.setRowHeight(logical_index, new_size) - - def resizeEvent(self, event): - """Update the frozen column dimensions. - - Updates takes place when the enclosing window of this - table reports a dimension change - """ - QTableView.resizeEvent(self, event) - self.frozen_table_view.update_geometry() - - def moveCursor(self, cursor_action, modifiers): - """Update the table position. - - Updates the position along with the frozen column - when the cursor (selector) changes its position - """ - current = QTableView.moveCursor(self, cursor_action, modifiers) - - col_width = self.columnWidth(0) + self.columnWidth(1) - topleft_x = self.visualRect(current).topLeft().x() - - overflow = self.MoveLeft and current.column() > 1 - overflow = overflow and topleft_x < col_width - - if cursor_action == overflow: - new_value = ( - self.horizontalScrollBar().value() + topleft_x - col_width - ) - self.horizontalScrollBar().setValue(new_value) - return current - - def scrollTo(self, index, hint): - """Scroll the table. - - It is necessary to ensure that the item at index is visible. - The view will try to position the item according to the - given hint. This method does not takes effect only if - the frozen column is scrolled. - """ - if index.column() > 1: - QTableView.scrollTo(self, index, hint) - - def load_more_data(self, value, rows=False, columns=False): - if rows and value == self.verticalScrollBar().maximum(): - self.model().fetch_more(rows=rows) - if columns and value == self.horizontalScrollBar().maximum(): - self.model().fetch_more(columns=columns) - - def sortByColumn(self, index): - """Implement a Column sort""" - frozen_header = self.frozen_table_view.horizontalHeader() - if not self.isSortingEnabled(): - self.header_class.setSortIndicatorShown(False) - frozen_header.setSortIndicatorShown(False) - return - if self.sort_old == [None]: - self.header_class.setSortIndicatorShown(True) - frozen_header.setSortIndicatorShown(index == 0) - if index == 0: - sort_order = frozen_header.sortIndicatorOrder() - else: - sort_order = self.header_class.sortIndicatorOrder() - if not self.model().sort(index, sort_order, True): - if len(self.sort_old) != 2: - self.header_class.setSortIndicatorShown(False) - frozen_header.setSortIndicatorShown(False) - else: - self.header_class.setSortIndicator( - self.sort_old[0], self.sort_old[1] - ) - if index == 0: - frozen_header.setSortIndicator( - self.sort_old[0], self.sort_old[1] - ) - return - self.sort_old = [index, self.header_class.sortIndicatorOrder()] - - def change_type(self, func): - """A function that changes types of cells""" - model = self.model() - index_list = self.selectedIndexes() - for i in index_list: - model.setData(i, "", change_type=func) - - def insert_row_above_selection(self): - """Insert rows above the selection - - The number of rows inserted depends on the number of selected rows""" - rows, cols = self._selected_rows_and_cols() - model = self.model() - if not model.rowCount(): - model.insertRows(0, 1) - elif not rows and not cols: - return - else: - min_row = min(rows) - nrows = len(set(rows)) - model.insertRows(min_row, nrows) - - def insert_row_below_selection(self): - """Insert rows below the selection - - The number of rows inserted depends on the number of selected rows""" - rows, cols = self._selected_rows_and_cols() - model = self.model() - if not model.rowCount(): - model.insertRows(0, 1) - elif not rows and not cols: - return - else: - max_row = max(rows) - nrows = len(set(rows)) - model.insertRows(max_row + 1, nrows) - - def _selected_rows_and_cols(self): - index_list = self.selectedIndexes() - if not index_list: - return [], [] - return list(zip(*[(i.row(), i.column()) for i in index_list])) - - docstrings.delete_params("DataFrameModel.parameters", "parent") - - @docstrings.dedent - def set_df(self, df, *args, **kwargs): - """ - Set the :class:`~pandas.DataFrame` for this table - - Parameters - ---------- - %(DataFrameModel.parameters.no_parent)s - """ - model = DataFrameModel(df, self.parent(), *args, **kwargs) - self.setModel(model) - self.frozen_table_view.setModel(model) - - def reset_model(self): - self.model().reset() - - def contextMenuEvent(self, event): - """Reimplement Qt method""" - model = self.model() - for a in self.dtype_actions.values(): - a.setEnabled(model.dtypes_changeable) - nrows = max(len(set(self._selected_rows_and_cols()[0])), 1) - self.insert_row_above_action.setText( - "Insert %i row%s above" % (nrows, "s" if nrows - 1 else "") - ) - self.insert_row_below_action.setText( - "Insert %i row%s below" % (nrows, "s" if nrows - 1 else "") - ) - self.insert_row_above_action.setEnabled(model.index_editable) - self.insert_row_below_action.setEnabled(model.index_editable) - self.menu.popup(event.globalPos()) - event.accept() - - def setup_menu(self): - """Setup context menu""" - menu = QMenu(self) - menu.addAction("Copy", self.copy, QtGui.QKeySequence.Copy) - menu.addSeparator() - functions = ( - ("To bool", bool), - ("To complex", complex), - ("To int", int), - ("To float", float), - ("To str", str), - ) - self.dtype_actions = { - name: menu.addAction(name, partial(self.change_type, func)) - for name, func in functions - } - menu.addSeparator() - self.insert_row_above_action = menu.addAction( - "Insert rows above", self.insert_row_above_selection - ) - self.insert_row_below_action = menu.addAction( - "Insert rows below", self.insert_row_below_selection - ) - menu.addSeparator() - self.set_index_action = menu.addAction( - "Set as index", partial(self.set_index, False) - ) - self.append_index_action = menu.addAction( - "Append to as index", partial(self.set_index, True) - ) - return menu - - def set_index(self, append=False): - """Set the index from the selected columns""" - model = self.model() - df = model.df - args = [model.dtypes_changeable, model.index_editable] - cols = np.unique(self._selected_rows_and_cols()[1]) - if not append: - cols += len(df.index.names) - 1 - df.reset_index(inplace=True) - else: - cols -= 1 - cols = cols.tolist() - if len(cols) == 1: - df.set_index(df.columns[cols[0]], inplace=True, append=append) - else: - df.set_index( - df.columns[cols].tolist(), inplace=True, append=append - ) - self.set_df(df, *args) - - def copy(self): - """Copy text to clipboard""" - rows, cols = self._selected_rows_and_cols() - if not rows and not cols: - return - row_min, row_max = min(rows), max(rows) - col_min, col_max = min(cols), max(cols) - index = header = False - if col_min == 0: - col_min = 1 - index = True - df = self.model().df - if col_max == 0: # To copy indices - contents = "\n".join( - map(str, df.index.tolist()[slice(row_min, row_max + 1)]) - ) - else: # To copy DataFrame - if (col_min == 0 or col_min == 1) and (df.shape[1] == col_max): - header = True - obj = df.iloc[ - slice(row_min, row_max + 1), slice(col_min - 1, col_max) - ] - output = io.StringIO() - obj.to_csv(output, sep="\t", index=index, header=header) - if not six.PY2: - contents = output.getvalue() - else: - contents = output.getvalue().decode("utf-8") - output.close() - clipboard = QApplication.clipboard() - clipboard.setText(contents) - - -class DataFrameDock(QDockWidget): - """The QDockWidget for the :class:`DataFrameEditor`""" - - def close(self): - """ - Reimplemented to remove the dock widget from the mainwindow when closed - """ - mainwindow = self.parent() - try: - mainwindow.dataframeeditors.remove(self.widget()) - except Exception: - pass - try: - mainwindow.removeDockWidget(self) - except Exception: - pass - if getattr(self.widget(), "_view_action", None) is not None: - mainwindow.dataframe_menu.removeAction(self.widget()._view_action) - return super(DataFrameDock, self).close() - - -class DataFrameEditor(DockMixin, QWidget): - """An editor for data frames""" - - dock_cls = DataFrameDock - - #: A signal that is emitted, if the table is cleared - cleared = QtCore.pyqtSignal() - - #: A signal that is emitted when a cell has been changed. The argument - #: is a tuple of two integers and one float: - #: the row index, the column index and the new value - cell_edited = QtCore.pyqtSignal(int, int, object, object) - - #: A signal that is emitted, if rows have been inserted into the dataframe. - #: The first value is the integer of the (original) position of the row, - #: the second one is the number of rows - rows_inserted = QtCore.pyqtSignal(int, int) - - @property - def hidden(self): - return not self.table.filled - - def __init__(self, *args, **kwargs): - super(DataFrameEditor, self).__init__(*args, **kwargs) - self.error_msg = PyErrorMessage(self) - - # Label for displaying the DataFrame size - self.lbl_size = QLabel() - - # A Checkbox for enabling and disabling the editability of the index - self.cb_index_editable = QCheckBox("Index editable") - - # A checkbox for enabling and disabling the change of data types - self.cb_dtypes_changeable = QCheckBox("Datatypes changeable") - - # A checkbox for enabling and disabling sorting - self.cb_enable_sort = QCheckBox("Enable sorting") - - # A button to open a dataframe from the file - self.btn_open_df = QToolButton(parent=self) - self.btn_open_df.setIcon(QIcon(get_icon("run_arrow.png"))) - self.btn_open_df.setToolTip("Open a DataFrame from your disk") - - self.btn_from_console = LoadFromConsoleButton(pd.DataFrame) - self.btn_from_console.setToolTip("Show a DataFrame from the console") - - # The table to display the DataFrame - self.table = DataFrameView(pd.DataFrame(), self) - - # format line edit - self.format_editor = QLineEdit() - self.format_editor.setText(self.table.model()._format) - - # format update button - self.btn_change_format = QPushButton("Update") - self.btn_change_format.setEnabled(False) - - # table clearing button - self.btn_clear = QPushButton("Clear") - self.btn_clear.setToolTip( - "Clear the table and disconnect from the DataFrame" - ) - - # refresh button - self.btn_refresh = QToolButton() - self.btn_refresh.setIcon(QIcon(get_icon("refresh.png"))) - self.btn_refresh.setToolTip("Refresh the table") - - # close button - self.btn_close = QPushButton("Close") - self.btn_close.setToolTip("Close this widget permanentely") - - # --------------------------------------------------------------------- - # ------------------------ layout -------------------------------- - # --------------------------------------------------------------------- - vbox = QVBoxLayout() - self.top_hbox = hbox = QHBoxLayout() - hbox.addWidget(self.cb_index_editable) - hbox.addWidget(self.cb_dtypes_changeable) - hbox.addWidget(self.cb_enable_sort) - hbox.addWidget(self.lbl_size) - hbox.addStretch(0) - hbox.addWidget(self.btn_open_df) - hbox.addWidget(self.btn_from_console) - vbox.addLayout(hbox) - vbox.addWidget(self.table) - self.bottom_hbox = hbox = QHBoxLayout() - hbox.addWidget(self.format_editor) - hbox.addWidget(self.btn_change_format) - hbox.addStretch(0) - hbox.addWidget(self.btn_clear) - hbox.addWidget(self.btn_close) - hbox.addWidget(self.btn_refresh) - vbox.addLayout(hbox) - self.setLayout(vbox) - - # --------------------------------------------------------------------- - # ------------------------ Connections -------------------------------- - # --------------------------------------------------------------------- - self.cb_dtypes_changeable.stateChanged.connect( - self.set_dtypes_changeable - ) - self.cb_index_editable.stateChanged.connect(self.set_index_editable) - self.btn_from_console.object_loaded.connect(self._open_ds_from_console) - self.rows_inserted.connect(lambda i, n: self.set_lbl_size_text()) - self.format_editor.textChanged.connect(self.toggle_fmt_button) - self.btn_change_format.clicked.connect(self.update_format) - self.btn_clear.clicked.connect(self.clear_table) - self.btn_close.clicked.connect(self.clear_table) - self.btn_close.clicked.connect(lambda: self.close()) - self.btn_refresh.clicked.connect(self.table.reset_model) - self.btn_open_df.clicked.connect(self._open_dataframe) - self.table.set_index_action.triggered.connect( - self.update_index_editable - ) - self.table.append_index_action.triggered.connect( - self.update_index_editable - ) - self.cb_enable_sort.stateChanged.connect(self.table.setSortingEnabled) - - def update_index_editable(self): - model = self.table.model() - if len(model.df.index.names) > 1: - model.index_editable = False - self.cb_index_editable.setEnabled(False) - self.cb_index_editable.setChecked(model.index_editable) - - def set_lbl_size_text(self, nrows=None, ncols=None): - """Set the text of the :attr:`lbl_size` label to display the size""" - model = self.table.model() - nrows = nrows if nrows is not None else model.rowCount() - ncols = ncols if ncols is not None else model.columnCount() - if not nrows and not ncols: - self.lbl_size.setText("") - else: - self.lbl_size.setText("Rows: %i, Columns: %i" % (nrows, ncols)) - - def clear_table(self): - """Clear the table and emit the :attr:`cleared` signal""" - df = pd.DataFrame() - self.set_df(df, show=False) - - def _open_ds_from_console(self, oname, df): - self.set_df(df) - - @docstrings.dedent - def set_df(self, df, *args, **kwargs): - """ - Fill the table from a :class:`~pandas.DataFrame` - - Parameters - ---------- - %(DataFrameModel.parameters.no_parent)s - show: bool - If True (default), show and raise_ the editor - """ - show = kwargs.pop("show", True) - self.table.set_df(df, *args, **kwargs) - self.set_lbl_size_text(*df.shape) - model = self.table.model() - self.cb_dtypes_changeable.setChecked(model.dtypes_changeable) - - if len(model.df.index.names) > 1: - model.index_editable = False - self.cb_index_editable.setEnabled(False) - else: - self.cb_index_editable.setEnabled(True) - self.cb_index_editable.setChecked(model.index_editable) - self.cleared.emit() - if show: - self.show_plugin() - self.dock.raise_() - - def set_index_editable(self, state): - """Set the :attr:`DataFrameModel.index_editable` attribute""" - self.table.model().index_editable = state == Qt.Checked - - def set_dtypes_changeable(self, state): - """Set the :attr:`DataFrameModel.dtypes_changeable` attribute""" - self.table.model().dtypes_changeable = state == Qt.Checked - - def toggle_fmt_button(self, text): - try: - text % 1.1 - except (TypeError, ValueError): - self.btn_change_format.setEnabled(False) - else: - self.btn_change_format.setEnabled( - text.strip() != self.table.model()._format - ) - - def update_format(self): - """Update the format of the table""" - self.table.model().set_format(self.format_editor.text().strip()) - - def to_dock(self, main, *args, **kwargs): - connect = self.dock is None - super(DataFrameEditor, self).to_dock(main, *args, **kwargs) - if connect: - self.dock.toggleViewAction().triggered.connect(self.maybe_tabify) - - def maybe_tabify(self): - main = self.dock.parent() - if self.is_shown and main.dockWidgetArea( - main.help_explorer.dock - ) == main.dockWidgetArea(self.dock): - main.tabifyDockWidget(main.help_explorer.dock, self.dock) - - def _open_dataframe(self): - self.open_dataframe() - - def open_dataframe(self, fname=None, *args, **kwargs): - """Opens a file dialog and the dataset that has been inserted""" - if fname is None: - fname = QFileDialog.getOpenFileName( - self, - "Open dataset", - os.getcwd(), - "Comma separated files (*.csv);;" - "Excel files (*.xls *.xlsx);;" - "JSON files (*.json);;" - "All files (*)", - ) - if with_qt5: # the filter is passed as well - fname = fname[0] - if isinstance(fname, pd.DataFrame): - self.set_df(fname) - elif not fname: - return - else: - ext = osp.splitext(fname)[1] - open_funcs = { - ".xls": pd.read_excel, - ".xlsx": pd.read_excel, - ".json": pd.read_json, - ".tab": partial(pd.read_csv, delimiter="\t"), - ".dat": partial(pd.read_csv, delim_whitespace=True), - } - open_func = open_funcs.get(ext, pd.read_csv) - try: - df = open_func(fname) - except Exception: - self.error_msg.showTraceback( - "Could not open DataFrame %s with %s" - % (fname, open_func) - ) - return - self.set_df(df) - - def close(self, *args, **kwargs): - if self.dock is not None: - self.dock.close(*args, **kwargs) # removes the dock window - del self.dock - return super(DataFrameEditor, self).close(*args, **kwargs) diff --git a/psyplot_gui/dependencies.py b/psyplot_gui/dependencies.py deleted file mode 100644 index 4507744..0000000 --- a/psyplot_gui/dependencies.py +++ /dev/null @@ -1,202 +0,0 @@ -"""Dependencies widget of the psyplot package - -This module defines the :class:`DependenciesWidget` that shows the versions of -of psyplot, psyplot_gui, psyplot plugins and their requirements""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -from psyplot.docstring import docstrings - -from psyplot_gui.compat.qtcompat import ( - QAbstractItemView, - QAction, - QApplication, - QDialog, - QDialogButtonBox, - QHBoxLayout, - QLabel, - QMenu, - QMessageBox, - QPushButton, - Qt, - QtCore, - QTreeWidget, - QTreeWidgetItem, - QVBoxLayout, -) - - -class DependenciesTree(QTreeWidget): - """A tree widget to display dependencies - - This widget uses a dictionary as created through the - :func:`psyplot.get_versions` function to display the requirements and - versions.""" - - @docstrings.get_sections(base="DependenciesTree") - def __init__(self, versions, *args, **kwargs): - """ - Parameters - ---------- - versions: dict - The dictionary that contains the version information - - See Also - -------- - psyplot.get_versions - """ - super(DependenciesTree, self).__init__(*args, **kwargs) - self.resizeColumnToContents(0) - self.setColumnCount(2) - self.setHeaderLabels(["Package", "installed version"]) - self.add_dependencies(versions) - self.expandAll() - self.resizeColumnToContents(0) - self.setContextMenuPolicy(Qt.CustomContextMenu) - self.customContextMenuRequested.connect(self.open_menu) - - @docstrings.dedent - def add_dependencies(self, versions, parent=None): - """ - Add the version informations to the tree - - This method creates an QTreeWidgetItem for each package in `versions` - and adds it to this tree. - - Parameters - ---------- - %(DependenciesTree.parameters)s - parent: QTreeWidgetItem - The parent of the newly created items for the packages in - `versions`. If None, the newly created items are inserted as - top level items into the tree - """ - for pkg, pkg_d in versions.items(): - new_item = QTreeWidgetItem(0) - new_item.setText(0, pkg) - if isinstance(pkg_d, dict): - new_item.setText(1, pkg_d["version"]) - else: - new_item.setText(1, pkg_d) - if parent is None: - self.addTopLevelItem(new_item) - else: - parent.addChild(new_item) - if "requirements" in pkg_d: - self.add_dependencies(pkg_d["requirements"], new_item) - - def open_menu(self, position): - """Open a menu to expand and collapse all items in the tree - - Parameters - ---------- - position: QPosition - The position where to open the menu""" - menu = QMenu() - expand_all_action = QAction("Expand all", self) - expand_all_action.triggered.connect(self.expandAll) - menu.addAction(expand_all_action) - collapse_all_action = QAction("Collapse all", self) - collapse_all_action.triggered.connect(self.collapseAll) - menu.addAction(collapse_all_action) - menu.exec_(self.viewport().mapToGlobal(position)) - - -class DependenciesDialog(QDialog): - """A dialog for displaying the dependencies""" - - #: description label - label = None - - #: the QVBoxLayout containing all the widgets - vbox = None - - #: The :class:`DependenciesTree` that contains the package infos - tree = None - - #: The QPushButton used for copying selected packages to the clipboard - bt_copy = None - - #: A simple info label for info messages - info_label = None - - #: A QTimer that clears the :attr:`info_label` after some time - timer = None - - @docstrings.dedent - def __init__(self, versions, *args, **kwargs): - """ - Parameters - ---------- - %(DependenciesTree.parameters)s - """ - super(DependenciesDialog, self).__init__(*args, **kwargs) - self.setWindowTitle("Dependencies") - self.versions = versions - self.vbox = layout = QVBoxLayout() - - self.label = QLabel( - """ - psyplot and the plugins depend on several python libraries. The - tree widget below lists the versions of the plugins and the - requirements. You can select the items in the tree and copy them to - clipboard.""", - parent=self, - ) - - layout.addWidget(self.label) - - self.tree = DependenciesTree(versions, parent=self) - self.tree.setSelectionMode(QAbstractItemView.MultiSelection) - layout.addWidget(self.tree) - - # copy button - self.bt_copy = QPushButton("Copy selection to clipboard") - self.bt_copy.setToolTip( - "Copy the selected packages in the above table to the clipboard." - ) - self.bt_copy.clicked.connect(lambda: self.copy_selected()) - - self.bbox = QDialogButtonBox(QDialogButtonBox.Ok) - self.bbox.accepted.connect(self.accept) - - hbox = QHBoxLayout() - hbox.addWidget(self.bt_copy) - hbox.addStretch(1) - hbox.addWidget(self.bbox) - layout.addLayout(hbox) - - #: A label for simple status update - self.info_label = QLabel("", self) - layout.addWidget(self.info_label) - self.timer = QtCore.QTimer(self) - self.timer.timeout.connect(self.clear_label) - - self.setLayout(layout) - - def copy_selected(self, label=None): - """Copy the selected versions and items to the clipboard""" - d = {} - items = self.tree.selectedItems() - if not items: - QMessageBox.warning( - self, - "No packages selected!", - "Please select packages in the tree!", - ) - return - for item in items: - d[item.text(0)] = item.text(1) - if label is None: - label = QApplication.clipboard() - label.setText("\n".join("%s: %s" % t for t in d.items())) - self.info_label.setText("Packages copied to clipboard.") - self.timer.start(3000) - - def clear_label(self): - """Clear the info label""" - self.info_label.setText("") diff --git a/psyplot_gui/fmt_widget.py b/psyplot_gui/fmt_widget.py deleted file mode 100644 index bf680fc..0000000 --- a/psyplot_gui/fmt_widget.py +++ /dev/null @@ -1,730 +0,0 @@ -# -*- coding: utf-8 -*- -"""Module defining a widget for updating the formatoption of the current -project""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -import logging -from collections import defaultdict -from functools import partial -from itertools import chain -from warnings import warn - -import psyplot.plotter as psyp -import psyplot.project as psy -import six -import yaml -from IPython.core.interactiveshell import ExecutionResult -from psyplot.data import isstring, safe_list -from psyplot.utils import _temp_bool_prop, unique_everseen - -from psyplot_gui.common import DockMixin, PyErrorMessage, get_icon -from psyplot_gui.compat.qtcompat import ( - QCheckBox, - QComboBox, - QCompleter, - QHBoxLayout, - QIcon, - QLineEdit, - QListView, - QPushButton, - QStandardItem, - QStandardItemModel, - Qt, - QTextEdit, - QToolButton, - QVBoxLayout, - QWidget, - with_qt5, -) -from psyplot_gui.config.rcsetup import rcParams -from psyplot_gui.plot_creator import CoordComboBox - -try: - from IPython.core.interactiveshell import ExecutionInfo -except ImportError: - ExecutionInfo = None - - -logger = logging.getLogger(__name__) - - -COORDSGROUP = "__coords" -ALLGROUP = "__all" - - -class DimensionsWidget(QWidget): - """A widget for updating the dimensions""" - - def __init__(self, parent, dim=None): - super(DimensionsWidget, self).__init__(parent) - self.coord_combo = CoordComboBox(self.get_ds, dim) - self.cb_use_coord = QCheckBox("show coordinates") - self.cb_close_popups = QCheckBox("close dropdowns") - self.cb_close_popups.setChecked(True) - self.toggle_close_popup() - self._single_selection = False - - self.dim = dim - hbox = QHBoxLayout() - hbox.addWidget(self.cb_close_popups) - hbox.addWidget(self.cb_use_coord) - hbox.addWidget(self.coord_combo) - self.setLayout(hbox) - self.cb_use_coord.stateChanged.connect(self.reset_combobox) - self.cb_close_popups.stateChanged.connect(self.toggle_close_popup) - self.coord_combo.leftclick.connect(self.insert_from_combo) - - def set_dim(self, dim): - self.dim = self.coord_combo.dim = dim - - def slice2list(self, sl): - if not isinstance(sl, slice): - return sl - return list(range(*sl.indices(self.coord_combo.count() - 1))) - - def reset_combobox(self): - """Clear all comboboxes""" - self.coord_combo.use_coords = self.cb_use_coord.isChecked() - self.coord_combo.clear() - self.coord_combo._is_empty = True - - def toggle_close_popup(self): - self.coord_combo.close_popups = self.cb_close_popups.isChecked() - - def insert_from_combo(self): - cb = self.coord_combo - inserts = list( - ind.row() - 1 - for ind in cb.view().selectionModel().selectedIndexes() - if ind.row() > 0 - ) - if not inserts: - return - elif not self._single_selection: - try: - current = yaml.load( - self.parent().get_text(), Loader=yaml.Loader - ) - except Exception: - pass - else: - if current: - current = self.slice2list(current) - inserts = sorted(set(chain(inserts, safe_list(current)))) - else: - inserts = inserts[0] - - self.parent().set_obj(inserts) - - def get_ds(self): - import psyplot.project as psy - - project = psy.gcp() - datasets = project.datasets - dim = self.dim - dims = {ds.coords[dim].shape[0]: ds for ds in datasets.values()} - if len(dims) > 1: - warn( - "Datasets have differing dimensions lengths for the " - "%s dimension!" % dim - ) - return min(dims.items())[1] - - def set_single_selection(self, yes=True): - self._single_selection = yes - if yes: - self.coord_combo.view().setSelectionMode(QListView.SingleSelection) - else: - self.coord_combo.view().setSelectionMode( - QListView.ExtendedSelection - ) - - -class FormatoptionWidget(QWidget, DockMixin): - """ - Widget to update the formatoptions of the current project - - This widget, mainly made out of a combobox for the formatoption group, - a combobox for the formatoption, and a text editor, is designed - for updating the selected formatoptions for the current subproject. - - The widget is connected to the :attr:`psyplot.project.Project.oncpchange` - signal and refills the comboboxes if the current subproject changes. - - The text editor either accepts python code that will be executed by the - given `console`, or yaml code. - """ - - no_fmtos_update = _temp_bool_prop( - "no_fmtos_update", """update the fmto combo box or not""" - ) - - #: The combobox for the formatoption groups - group_combo = None - - #: The combobox for the formatoptions - fmt_combo = None - - #: The help_explorer to display the documentation of the formatoptions - help_explorer = None - - #: The formatoption specific widget that is loaded from the formatoption - fmt_widget = None - - #: A line edit for updating the formatoptions - line_edit = None - - #: A multiline text editor for updating the formatoptions - text_edit = None - - #: A button to switch between :attr:`line_edit` and :attr:`text_edit` - multiline_button = None - - @property - def shell(self): - """The shell to execute the update of the formatoptions in the current - project""" - return self.console.kernel_manager.kernel.shell - - def __init__(self, *args, **kwargs): - """ - Parameters - ---------- - help_explorer: psyplot_gui.help_explorer.HelpExplorer - The help explorer to show the documentation of one formatoption - console: psyplot_gui.console.ConsoleWidget - The console that can be used to update the current subproject via:: - - psy.gcp().update(**kwargs) - - where ``**kwargs`` is defined through the selected formatoption - in the :attr:`fmt_combo` combobox and the value in the - :attr:`line_edit` editor - ``*args, **kwargs`` - Any other keyword for the QWidget class - """ - help_explorer = kwargs.pop("help_explorer", None) - console = kwargs.pop("console", None) - super(FormatoptionWidget, self).__init__(*args, **kwargs) - self.help_explorer = help_explorer - self.console = console - self.error_msg = PyErrorMessage(self) - - # --------------------------------------------------------------------- - # -------------------------- Child widgets ---------------------------- - # --------------------------------------------------------------------- - self.group_combo = QComboBox(parent=self) - self.fmt_combo = QComboBox(parent=self) - self.line_edit = QLineEdit(parent=self) - self.text_edit = QTextEdit(parent=self) - self.run_button = QToolButton(parent=self) - - # completer for the fmto widget - self.fmt_combo.setEditable(True) - self.fmt_combo.setInsertPolicy(QComboBox.NoInsert) - self.fmto_completer = completer = QCompleter( - ["time", "lat", "lon", "lev"] - ) - completer.setCompletionMode(QCompleter.PopupCompletion) - completer.activated[str].connect(self.set_fmto) - if with_qt5: - completer.setFilterMode(Qt.MatchContains) - completer.setModel(QStandardItemModel()) - self.fmt_combo.setCompleter(completer) - - self.dim_widget = DimensionsWidget(parent=self) - self.dim_widget.setVisible(False) - - self.multiline_button = QPushButton("Multiline", parent=self) - self.multiline_button.setCheckable(True) - - self.yaml_cb = QCheckBox("Yaml syntax") - self.yaml_cb.setChecked(True) - - self.keys_button = QPushButton("Keys", parent=self) - self.summaries_button = QPushButton("Summaries", parent=self) - self.docs_button = QPushButton("Docs", parent=self) - - self.grouped_cb = QCheckBox("grouped", parent=self) - self.all_groups_cb = QCheckBox("all groups", parent=self) - self.include_links_cb = QCheckBox("include links", parent=self) - - self.text_edit.setVisible(False) - - # --------------------------------------------------------------------- - # -------------------------- Descriptions ----------------------------- - # --------------------------------------------------------------------- - - self.group_combo.setToolTip("Select the formatoption group") - self.fmt_combo.setToolTip("Select the formatoption to update") - self.line_edit.setToolTip( - "Insert the value which what you want to update the selected " - "formatoption and hit right button. The code is executed in the " - "main console." - ) - self.yaml_cb.setToolTip( - "Use the yaml syntax for the values inserted in the above cell. " - "Otherwise the content there is evaluated as a python expression " - "in the terminal" - ) - self.text_edit.setToolTip(self.line_edit.toolTip()) - self.run_button.setIcon(QIcon(get_icon("run_arrow.png"))) - self.run_button.setToolTip("Update the selected formatoption") - self.multiline_button.setToolTip( - "Allow linebreaks in the text editor line above." - ) - self.keys_button.setToolTip( - "Show the formatoption keys in this group (or in all " - "groups) in the help explorer" - ) - self.summaries_button.setToolTip( - "Show the formatoption summaries in this group (or in all " - "groups) in the help explorer" - ) - self.docs_button.setToolTip( - "Show the formatoption documentations in this group (or in all " - "groups) in the help explorer" - ) - self.grouped_cb.setToolTip( - "Group the formatoptions before displaying them in the help " - "explorer" - ) - self.all_groups_cb.setToolTip( - "Use all groups when displaying the " "keys, docs or summaries" - ) - self.include_links_cb.setToolTip( - "Include links to remote documentations when showing the " - "keys, docs and summaries in the help explorer (requires " - "intersphinx)" - ) - - # --------------------------------------------------------------------- - # -------------------------- Connections ------------------------------ - # --------------------------------------------------------------------- - self.group_combo.currentIndexChanged[int].connect(self.fill_fmt_combo) - self.fmt_combo.currentIndexChanged[int].connect(self.show_fmt_info) - self.fmt_combo.currentIndexChanged[int].connect(self.load_fmt_widget) - self.fmt_combo.currentIndexChanged[int].connect( - self.set_current_fmt_value - ) - self.run_button.clicked.connect(self.run_code) - self.line_edit.returnPressed.connect(self.run_button.click) - self.multiline_button.clicked.connect(self.toggle_line_edit) - self.keys_button.clicked.connect( - partial(self.show_all_fmt_info, "keys") - ) - self.summaries_button.clicked.connect( - partial(self.show_all_fmt_info, "summaries") - ) - self.docs_button.clicked.connect( - partial(self.show_all_fmt_info, "docs") - ) - - # --------------------------------------------------------------------- - # ------------------------------ Layouts ------------------------------ - # --------------------------------------------------------------------- - self.combos = QHBoxLayout() - self.combos.addWidget(self.group_combo) - self.combos.addWidget(self.fmt_combo) - - self.execs = QHBoxLayout() - self.execs.addWidget(self.line_edit) - self.execs.addWidget(self.text_edit) - self.execs.addWidget(self.run_button) - - self.info_box = QHBoxLayout() - self.info_box.addWidget(self.multiline_button) - self.info_box.addWidget(self.yaml_cb) - self.info_box.addStretch(0) - for w in [ - self.keys_button, - self.summaries_button, - self.docs_button, - self.all_groups_cb, - self.grouped_cb, - self.include_links_cb, - ]: - self.info_box.addWidget(w) - - self.vbox = QVBoxLayout() - self.vbox.addLayout(self.combos) - self.vbox.addWidget(self.dim_widget) - self.vbox.addLayout(self.execs) - self.vbox.addLayout(self.info_box) - - self.vbox.setSpacing(0) - - self.setLayout(self.vbox) - - # fill with content - self.fill_combos_from_project(psy.gcp()) - psy.Project.oncpchange.connect(self.fill_combos_from_project) - rcParams.connect("fmt.sort_by_key", self.refill_from_rc) - - def refill_from_rc(self, sort_by_key): - from psyplot.project import gcp - - self.fill_combos_from_project(gcp()) - - def fill_combos_from_project(self, project): - """Fill :attr:`group_combo` and :attr:`fmt_combo` from a project - - Parameters - ---------- - project: psyplot.project.Project - The project to use""" - if rcParams["fmt.sort_by_key"]: - - def sorter(fmto): - return fmto.key - - else: - sorter = self.get_name - - current_text = self.group_combo.currentText() - with self.no_fmtos_update: - self.group_combo.clear() - if project is None or project.is_main or not len(project): - self.fmt_combo.clear() - self.groups = [] - self.fmtos = [] - self.line_edit.setEnabled(False) - return - self.line_edit.setEnabled(True) - # get dimensions - it_vars = chain.from_iterable( - arr.psy.iter_base_variables for arr in project.arrays - ) - dims = next(it_vars).dims - sdims = set(dims) - for var in it_vars: - sdims.intersection_update(var.dims) - coords = [d for d in dims if d in sdims] - coords_name = [COORDSGROUP] if coords else [] - coords_verbose = ["Dimensions"] if coords else [] - coords = [coords] if coords else [] - - if len(project.plotters): - # get formatoptions and group them alphabetically - grouped_fmts = defaultdict(list) - for fmto in project._fmtos: - grouped_fmts[fmto.group].append(fmto) - for val in six.itervalues(grouped_fmts): - val.sort(key=sorter) - grouped_fmts = dict( - sorted( - six.iteritems(grouped_fmts), - key=lambda t: psyp.groups.get(t[0], t[0]), - ) - ) - fmt_groups = list(grouped_fmts.keys()) - # save original names - self.groups = coords_name + [ALLGROUP] + fmt_groups - # save verbose group names (which are used in the combo box) - self.groupnames = ( - coords_verbose - + ["All formatoptions"] - + list(map(lambda s: psyp.groups.get(s, s), fmt_groups)) - ) - # save formatoptions - fmtos = list(grouped_fmts.values()) - self.fmtos = ( - coords + [sorted(chain(*fmtos), key=sorter)] + fmtos - ) - else: - self.groups = coords_name - self.groupnames = coords_verbose - self.fmtos = coords - self.group_combo.addItems(self.groupnames) - ind = self.group_combo.findText(current_text) - self.group_combo.setCurrentIndex(ind if ind >= 0 else 0) - self.fill_fmt_combo(self.group_combo.currentIndex()) - - def get_name(self, fmto): - """Get the name of a :class:`psyplot.plotter.Formatoption` instance""" - if isinstance(fmto, six.string_types): - return fmto - return "%s (%s)" % (fmto.name, fmto.key) if fmto.name else fmto.key - - @property - def fmto(self): - return self.fmtos[self.group_combo.currentIndex()][ - self.fmt_combo.currentIndex() - ] - - @fmto.setter - def fmto(self, value): - name = self.get_name(value) - for i, fmtos in enumerate(self.fmtos): - if i == 1: # all formatoptions - continue - if name in map(self.get_name, fmtos): - with self.no_fmtos_update: - self.group_combo.setCurrentIndex(i) - self.fill_fmt_combo(i, name) - return - - def toggle_line_edit(self): - """Switch between the :attr:`line_edit` and :attr:`text_edit` - - This method is called when the :attr:`multiline_button` is clicked - and switches between the single line :attr:``line_edit` and the - multiline :attr:`text_edit` - """ - # switch to multiline text edit - if ( - self.multiline_button.isChecked() - and not self.text_edit.isVisible() - ): - self.line_edit.setVisible(False) - self.text_edit.setVisible(True) - self.text_edit.setPlainText(self.line_edit.text()) - elif ( - not self.multiline_button.isChecked() - and not self.line_edit.isVisible() - ): - self.line_edit.setVisible(True) - self.text_edit.setVisible(False) - self.line_edit.setText(self.text_edit.toPlainText()) - - def fill_fmt_combo(self, i, current_text=None): - """Fill the :attr:`fmt_combo` combobox based on the current group name""" - if not self.no_fmtos_update: - with self.no_fmtos_update: - if current_text is None: - current_text = self.fmt_combo.currentText() - self.fmt_combo.clear() - self.fmt_combo.addItems( - list(map(self.get_name, self.fmtos[i])) - ) - ind = self.fmt_combo.findText(current_text) - self.fmt_combo.setCurrentIndex(ind if ind >= 0 else 0) - # update completer model - self.setup_fmt_completion_model() - idx = self.fmt_combo.currentIndex() - self.show_fmt_info(idx) - self.load_fmt_widget(idx) - self.set_current_fmt_value(idx) - - def set_fmto(self, name): - self.fmto = name - - def setup_fmt_completion_model(self): - fmtos = list( - unique_everseen( - map(self.get_name, chain.from_iterable(self.fmtos)) - ) - ) - model = self.fmto_completer.model() - model.setRowCount(len(fmtos)) - for i, name in enumerate(fmtos): - model.setItem(i, QStandardItem(name)) - - def load_fmt_widget(self, i): - """Load the formatoption specific widget - - This method loads the formatoption specific widget from the - :meth:`psyplot.plotter.Formatoption.get_fmt_widget` method and - displays it above the :attr:`line_edit` - - Parameters - ---------- - i: int - The index of the current formatoption""" - self.remove_fmt_widget() - group_ind = self.group_combo.currentIndex() - if not self.no_fmtos_update: - from psyplot.project import gcp - - if self.groups[group_ind] == COORDSGROUP: - dim = self.fmtos[group_ind][i] - self.fmt_widget = self.dim_widget - self.dim_widget.set_dim(dim) - self.dim_widget.set_single_selection(dim not in gcp()[0].dims) - self.dim_widget.setVisible(True) - else: - fmto = self.fmtos[group_ind][i] - self.fmt_widget = fmto.get_fmt_widget(self, gcp()) - if self.fmt_widget is not None: - self.vbox.insertWidget(2, self.fmt_widget) - - def reset_fmt_widget(self): - idx = self.fmt_combo.currentIndex() - self.load_fmt_widget(idx) - self.set_current_fmt_value(idx) - - def remove_fmt_widget(self): - if self.fmt_widget is not None: - self.fmt_widget.hide() - if self.fmt_widget is self.dim_widget: - self.fmt_widget.reset_combobox() - else: - self.vbox.removeWidget(self.fmt_widget) - self.fmt_widget.close() - del self.fmt_widget - - def set_current_fmt_value(self, i): - """Add the value of the current formatoption to the line text""" - group_ind = self.group_combo.currentIndex() - if not self.no_fmtos_update: - if self.groups[group_ind] == COORDSGROUP: - from psyplot.project import gcp - - dim = self.fmtos[group_ind][i] - self.set_obj(gcp().arrays[0].psy.idims[dim]) - else: - fmto = self.fmtos[group_ind][i] - self.set_obj(fmto.value) - - def show_fmt_info(self, i): - """Show the documentation of the formatoption in the help explorer""" - group_ind = self.group_combo.currentIndex() - if not self.no_fmtos_update and self.groups[group_ind] != COORDSGROUP: - fmto = self.fmtos[self.group_combo.currentIndex()][i] - fmto.plotter.show_docs( - fmto.key, include_links=self.include_links_cb.isChecked() - ) - - def run_code(self): - """Run the update of the project inside the :attr:`shell`""" - if self.line_edit.isVisible(): - text = str(self.line_edit.text()) - else: - text = str(self.text_edit.toPlainText()) - if not text or not self.fmtos: - return - group_ind = self.group_combo.currentIndex() - if self.groups[group_ind] == COORDSGROUP: - key = self.fmtos[group_ind][self.fmt_combo.currentIndex()] - param = "dims" - else: - key = self.fmtos[group_ind][self.fmt_combo.currentIndex()].key - param = "fmt" - if self.yaml_cb.isChecked(): - import psyplot.project as psy - - psy.gcp().update(**{key: yaml.load(text, Loader=yaml.Loader)}) - else: - code = "psy.gcp().update(%s={'%s': %s})" % (param, key, text) - if ExecutionInfo is not None: - info = ExecutionInfo( - raw_cell=code, - store_history=False, - silent=True, - shell_futures=False, - cell_id=None, - ) - e = ExecutionResult(info) - else: - e = ExecutionResult() - self.console.run_command_in_shell(code, e) - try: - e.raise_error() - except Exception: # reset the console and clear the error message - raise - finally: - self.console.reset() - - def get_text(self): - """Get the current update text""" - if self.line_edit.isVisible(): - return self.line_edit.text() - else: - return self.text_edit.toPlainText() - - def get_obj(self): - """Get the current update text""" - if self.line_edit.isVisible(): - txt = self.line_edit.text() - else: - txt = self.text_edit.toPlainText() - try: - obj = yaml.load(txt, Loader=yaml.Loader) - except Exception: - self.error_msg.showTraceback("Could not load %s" % txt) - else: - return obj - - def insert_obj(self, obj): - """Add a string to the formatoption widget""" - current = self.get_text() - use_yaml = self.yaml_cb.isChecked() - use_line_edit = self.line_edit.isVisible() - # strings are treated separately such that we consider quotation marks - # at the borders - if isstring(obj) and current: - if use_line_edit: - pos = self.line_edit.cursorPosition() - else: - pos = self.text_edit.textCursor().position() - if pos not in [0, len(current)]: - s = obj - else: - if current[0] in ['"', "'"]: - current = current[1:-1] - self.clear_text() - if pos == 0: - s = '"' + obj + current + '"' - else: - s = '"' + current + obj + '"' - current = "" - elif isstring(obj): # add quotation marks - s = '"' + obj + '"' - elif not use_yaml: - s = repr(obj) - else: - s = yaml.dump(obj, default_flow_style=True).strip() - if s.endswith("\n..."): - s = s[:-4] - if use_line_edit: - self.line_edit.insert(s) - else: - self.text_edit.insertPlainText(s) - - def clear_text(self): - if self.line_edit.isVisible(): - self.line_edit.clear() - else: - self.text_edit.clear() - - def set_obj(self, obj): - self.clear_text() - self.insert_obj(obj) - - def show_all_fmt_info(self, what): - """Show the keys, summaries or docs of the formatoptions - - Calling this function let's the help browser show the documentation - etc. of all docs or only the selected group determined by the state of - the :attr:`grouped_cb` and :attr:`all_groups_cb` checkboxes - - Parameters - ---------- - what: {'keys', 'summaries', 'docs'} - Determines what to show""" - if not self.fmtos: - return - if ( - self.all_groups_cb.isChecked() - or self.group_combo.currentIndex() < 2 - ): - fmtos = list( - chain.from_iterable( - fmto_group - for i, fmto_group in enumerate(self.fmtos) - if self.groups[i] not in [ALLGROUP, COORDSGROUP] - ) - ) - else: - fmtos = self.fmtos[self.group_combo.currentIndex()] - plotter = fmtos[0].plotter - getattr(plotter, "show_" + what)( - [fmto.key for fmto in fmtos], - grouped=self.grouped_cb.isChecked(), - include_links=self.include_links_cb.isChecked(), - ) diff --git a/psyplot_gui/help_explorer.py b/psyplot_gui/help_explorer.py deleted file mode 100644 index 04697fb..0000000 --- a/psyplot_gui/help_explorer.py +++ /dev/null @@ -1,1202 +0,0 @@ -# -*- coding: utf-8 -*- -"""Help explorer widget supplying a simple web browser and a plain text help -viewer""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -import inspect -import logging -import os.path as osp -import re -import shutil -import sys -from collections import namedtuple -from itertools import chain -from tempfile import mkdtemp - -import six -from IPython.core.oinspect import getdoc, signature -from psyplot.docstring import docstrings, indent -from psyplot.utils import _temp_bool_prop - -from psyplot_gui.common import ( - DockMixin, - PyErrorMessage, - StreamToLogger, - get_icon, - get_module_path, - is_running_tests, -) -from psyplot_gui.compat.qtcompat import ( - QAction, - QComboBox, - QCompleter, - QFrame, - QHBoxLayout, - QIcon, - QMenu, - QPlainTextEdit, - QSortFilterProxyModel, - QStandardItemModel, - Qt, - QtCore, - QtGui, - QToolButton, - QVBoxLayout, - QWebEngineView, - QWidget, - asstring, - isstring, - with_qt5, -) -from psyplot_gui.config.rcsetup import rcParams - -try: - from sphinx.application import Sphinx - from sphinx.pycode import ModuleAnalyzer - - try: - from psyplot.sphinxext.extended_napoleon import ( - ExtendedGoogleDocstring as GoogleDocstring, - ) - from psyplot.sphinxext.extended_napoleon import ( - ExtendedNumpyDocstring as NumpyDocstring, - ) - except ImportError: - from sphinx.ext.napoleon import GoogleDocstring, NumpyDocstring - with_sphinx = True -except ImportError: - with_sphinx = False - -if six.PY2: - from urlparse import urlparse -else: - from urllib.parse import urlparse - - -try: - import pathlib - - def file2html(fname): - return pathlib.Path(fname).as_uri() - -except ImportError: - - def file2html(fname): - return "file://" + fname - - -def html2file(url): - p = urlparse(asstring(url)) - # skip the first '/' on windows platform - return osp.abspath( - osp.join(p.netloc, p.path[int(sys.platform == "win32") :]) - ) - - -_viewers = dict() - - -logger = logging.getLogger(__name__) - - -class UrlCombo(QComboBox): - """A editable ComboBox with autocompletion""" - - def __init__(self, *args, **kwargs): - super(UrlCombo, self).__init__(*args, **kwargs) - self.setInsertPolicy(self.InsertAtTop) - self.setFocusPolicy(Qt.StrongFocus) - self.setEditable(True) - self.completer = QCompleter(self) - - # always show all completions - self.completer.setCompletionMode(QCompleter.UnfilteredPopupCompletion) - self.pFilterModel = QSortFilterProxyModel(self) - self.pFilterModel.setFilterCaseSensitivity(Qt.CaseInsensitive) - - self.completer.setPopup(self.completer.popup()) - - self.setCompleter(self.completer) - - self.lineEdit().textEdited[str].connect( - self.pFilterModel.setFilterFixedString - ) - self.completer.activated.connect(self.add_text_on_top) - self.setModel(QStandardItemModel()) - - def setModel(self, model): - """Reimplemented to also set the model of the filter and completer""" - super(UrlCombo, self).setModel(model) - self.pFilterModel.setSourceModel(model) - self.completer.setModel(self.pFilterModel) - - def add_text_on_top(self, text=None, block=False): - """Add the given text as the first item""" - if text is None: - text = self.currentText() - ind = self.findText(text) - if block: - self.blockSignals(True) - if ind == -1: - self.insertItem(0, text) - elif ind != 0: - self.removeItem(ind) - self.insertItem(0, text) - self.setCurrentIndex(0) - if block: - self.blockSignals(False) - - # replace keyPressEvent to always insert the selected item at the top - def keyPressEvent(self, event): - """Handle key press events""" - if event.key() == Qt.Key_Return or event.key() == Qt.Key_Enter: - self.add_text_on_top() - else: - QComboBox.keyPressEvent(self, event) - - -class UrlBrowser(QFrame): - """Very simple browser with session history and autocompletion based upon - the :class:`PyQt5.QtWebEngineWidgets.QWebEngineView` class - - Warnings - -------- - This class is known to crash under PyQt4 when new web page domains are - loaded. Hence it should be handled with care""" - - completed = _temp_bool_prop( - "completed", - "Boolean whether the html page loading is completed.", - default=True, - ) - - url_like_re = re.compile(r"^\w+://") - - doc_urls = dict( - [ - ("startpage", "https://startpage.com/"), - ("psyplot", "http://psyplot.github.io/psyplot/"), - ("pyplot", "http://matplotlib.org/api/pyplot_api.html"), - ( - "seaborn", - "http://stanford.edu/~mwaskom/software/seaborn/api.html", - ), - ( - "cartopy", - "http://scitools.org.uk/cartopy/docs/latest/index.html", - ), - ("xarray", "http://xarray.pydata.org/en/stable/"), - ("pandas", "http://pandas.pydata.org/pandas-docs/stable/"), - ( - "numpy", - "https://docs.scipy.org/doc/numpy/reference/routines.html", - ), - ] - ) - - #: The initial url showed in the webview. If None, nothing will be - #: displayed - default_url = None - - #: adress line - tb_url = None - - #: button to go to previous url - bt_back = None - - #: button to go to next url - bt_ahead = None - - #: refresh the current url - bt_refresh = None - - #: button to go lock to the current url - bt_lock = None - - #: button to disable browsing in www - bt_url_lock = None - - #: The upper part of the browser containing all the buttons - button_box = None - - #: The upper most layout aranging the button box and the html widget - vbox = None - - #: default value for :attr:`bt_lock`. Is set during browser - #: initialization - bt_lock_default = None - - #: default value for :attr:`bt_url_lock`. Is set during browser - #: initialization - bt_url_lock_default = None - - def __init__(self, *args, **kwargs): - super(UrlBrowser, self).__init__(*args, **kwargs) - - # --------------------------------------------------------------------- - # ---------------------------- upper buttons -------------------------- - # --------------------------------------------------------------------- - # adress line - self.tb_url = UrlCombo(self) - # button to go to previous url - self.bt_back = QToolButton(self) - # button to go to next url - self.bt_ahead = QToolButton(self) - # refresh the current url - self.bt_refresh = QToolButton(self) - # button to go lock to the current url - self.bt_lock = QToolButton(self) - # button to disable browsing in www - self.bt_url_lock = QToolButton(self) - - # ---------------------------- buttons settings ----------------------- - self.bt_back.setIcon(QIcon(get_icon("previous.png"))) - self.bt_back.setToolTip("Go back one page") - self.bt_ahead.setIcon(QIcon(get_icon("next.png"))) - self.bt_back.setToolTip("Go forward one page") - - self.bt_refresh.setIcon(QIcon(get_icon("refresh.png"))) - self.bt_refresh.setToolTip("Refresh the current page") - - self.bt_lock.setCheckable(True) - self.bt_url_lock.setCheckable(True) - - if not with_qt5 and rcParams["help_explorer.online"] is None: - # We now that the browser can crash with Qt4, therefore we disable - # the browing in the internet - self.bt_url_lock.click() - rcParams["help_explorer.online"] = False - elif rcParams["help_explorer.online"] is False: - self.bt_url_lock.click() - elif rcParams["help_explorer.online"] is None: - rcParams["help_explorer.online"] = True - rcParams.connect("help_explorer.online", self.update_url_lock_from_rc) - - self.bt_url_lock.clicked.connect(self.toogle_url_lock) - self.bt_lock.clicked.connect(self.toogle_lock) - - # tooltip and icons of lock and url_lock are set in toogle_lock and - # toogle_url_lock - self.toogle_lock() - self.toogle_url_lock() - - # --------------------------------------------------------------------- - # --------- initialization and connection of the web view ------------- - # --------------------------------------------------------------------- - - #: The actual widget showing the html content - self.html = QWebEngineView(parent=self) - self.html.loadStarted.connect(self.completed) - self.html.loadFinished.connect(self.completed) - - self.tb_url.currentIndexChanged[str].connect(self.browse) - self.bt_back.clicked.connect(self.html.back) - self.bt_ahead.clicked.connect(self.html.forward) - self.bt_refresh.clicked.connect(self.html.reload) - self.html.urlChanged.connect(self.url_changed) - - # --------------------------------------------------------------------- - # ---------------------------- layouts -------------------------------- - # --------------------------------------------------------------------- - - # The upper part of the browser containing all the buttons - self.button_box = button_box = QHBoxLayout() - - button_box.addWidget(self.bt_back) - button_box.addWidget(self.bt_ahead) - button_box.addWidget(self.tb_url) - button_box.addWidget(self.bt_refresh) - button_box.addWidget(self.bt_lock) - button_box.addWidget(self.bt_url_lock) - - # The upper most layout aranging the button box and the html widget - self.vbox = vbox = QVBoxLayout() - self.vbox.setContentsMargins(0, 0, 0, 0) - vbox.addLayout(button_box) - - vbox.addWidget(self.html) - - self.setLayout(vbox) - - if self.default_url is not None: - self.tb_url.addItem(self.default_url) - - self.bt_lock_default = bool(self.bt_lock.isChecked()) - self.bt_url_lock_default = bool(self.bt_url_lock.isChecked()) - - def browse(self, url): - """Make a web browse on the given url and show the page on the Webview - widget.""" - if self.bt_lock.isChecked(): - return - if not self.url_like_re.match(url): - url = "https://" + url - if self.bt_url_lock.isChecked() and url.startswith("http"): - return - if not self.completed: - logger.debug("Stopping current load...") - self.html.stop() - self.completed = True - logger.debug("Loading %s", url) - # we use :meth:`PyQt5.QtWebEngineWidgets.QWebEngineView.setUrl` instead - # of :meth:`PyQt5.QtWebEngineWidgets.QWebEngineView.load` because that - # changes the url directly and is more useful for unittests - self.html.setUrl(QtCore.QUrl(url)) - - def url_changed(self, url): - """Triggered when the url is changed to update the adress line""" - try: - url = url.toString() - except AttributeError: - pass - logger.debug("url changed to %s", url) - try: - self.tb_url.setCurrentText(url) - except AttributeError: # Qt4 - self.tb_url.setEditText(url) - self.tb_url.add_text_on_top(url, block=True) - - def update_url_lock_from_rc(self, online): - if ( - online - and self.bt_url_lock.isChecked() - or not online - and not self.bt_url_lock.isChecked() - ): - self.bt_url_lock.click() - - def toogle_url_lock(self): - """Disable (or enable) the loading of web pages in www""" - bt = self.bt_url_lock - offline = bt.isChecked() - bt.setIcon( - QIcon(get_icon("world_red.png" if offline else "world.png")) - ) - online_message = "Go online" - if not with_qt5: - online_message += ( - "\nWARNING: This mode is unstable under Qt4 " - "and might result in a complete program crash!" - ) - bt.setToolTip(online_message if offline else "Offline mode") - if rcParams["help_explorer.online"] is offline: - rcParams["help_explorer.online"] = not offline - - def toogle_lock(self): - """Disable (or enable) the changing of the current webpage""" - bt = self.bt_lock - bt.setIcon( - QIcon(get_icon("lock.png" if bt.isChecked() else "lock_open.png")) - ) - bt.setToolTip("Unlock" if bt.isChecked() else "Lock to current page") - - -class HelpMixin(object): - """Base class for providing help on an object""" - - #: Object containing the necessary fields to describe an object given to - #: the help widget. The descriptor is set up by the :meth:`describe_object` - #: method. - object_descriptor = namedtuple("ObjectDescriptor", ["obj", "name"]) - - #: :class:`bool` determining whether the documentation of an object can be - #: shown or not - can_document_object = True - #: :class:`bool` determining whether this class can show restructured text - can_show_rst = True - - @docstrings.get_sections(base="HelpMixin.show_help") - @docstrings.dedent - def show_help(self, obj, oname="", files=None): - """ - Show the rst documentation for the given object - - Parameters - ---------- - obj: object - The object to get the documentation for - oname: str - The name to use for the object in the documentation - files: list of str - A path to additional files that shall be used to process the - docs""" - descriptor = self.describe_object(obj, oname) - doc = self.get_doc(descriptor) - return self.show_rst(doc, descriptor=descriptor, files=files) - - def header(self, descriptor, sig): - """Format the header and include object name and signature `sig` - - Returns - ------- - str - The header for the documentation""" - bars = "=" * len(descriptor.name + sig) - return bars + "\n" + descriptor.name + sig + "\n" + bars + "\n" - - def describe_object(self, obj, oname=""): - """Return an instance of the :attr:`object_descriptor` class - - Returns - ------- - :attr:`object_descriptor` - The descriptor containing the information on the object""" - return self.object_descriptor(obj, oname) - - def get_doc(self, descriptor): - """Get the documentation of the object in the given `descriptor` - - Parameters - ---------- - descriptor: instance of :attr:`object_descriptor` - The descriptor containig the information on the specific object - - Returns - ------- - str - The header and documentation of the object in the descriptor - - Notes - ----- - This method uses the :func:`IPython.core.oinspect.getdoc` function to - get the documentation and the :func:`IPython.core.oinspect.signature` - function to get the signature. Those function (different from the - inspect module) do not fail when the object is not saved""" - obj = descriptor.obj - oname = descriptor.name - sig = "" - obj_sig = obj - if callable(obj): - if inspect.isclass(obj): - oname = oname or obj.__name__ - obj_sig = getattr(obj, "__init__", obj) - else: - obj_sig = getattr(obj, "__call__", obj) - - try: - sig = str(signature(obj_sig)) - sig = re.sub(r"^\(\s*self,\s*", "(", sig) - except Exception: - logger.debug( - "Failed to get signature from %s!" % (obj,), exc_info=True - ) - oname = oname or type(oname).__name__ - head = self.header(descriptor, sig) - lines = [] - ds = getdoc(obj) - if ds: - lines.append("") - lines.append(ds) - if inspect.isclass(obj) and hasattr(obj, "__init__"): - init_ds = getdoc(obj.__init__) - if init_ds is not None: - lines.append("\n" + init_ds) - elif hasattr(obj, "__call__"): - call_ds = getdoc(obj.__call__) - if call_ds and call_ds != getdoc(object.__call__): - lines.append("\n" + call_ds) - doc = self.process_docstring(lines, descriptor) - return head + "\n" + doc - - def process_docstring(self, lines, descriptor): - """Make final modification on the rst lines - - Returns - ------- - str - The docstring""" - return "\n".join(lines) - - @docstrings.get_sections(base="HelpMixin.show_rst") - @docstrings.dedent - def show_rst(self, text, oname="", descriptor=None, files=None): - """ - Abstract method which needs to be implemented by th widget to show - restructured text - - Parameters - ---------- - text: str - The text to show - oname: str - The object name - descriptor: instance of :attr:`object_descriptor` - The object descriptor holding the informations - files: list of str - A path to additional files that shall be used to display the docs - - Returns - ------- - bool - True if the text is displayed - """ - return False - - @docstrings.get_sections(base="HelpMixin.show_intro") - def show_intro(self, text=""): - """ - Show an intro message - - Parameters - ---------- - s: str - A string in reStructured Text format to show""" - title = "Welcome to psyplot!" - title += "\n" + "-" * len(title) + "\n\n" - self.show_rst(title + text, "intro") - - -class TextHelp(QFrame, HelpMixin): - """Class to show plain text rst docstrings""" - - def __init__(self, *args, **kwargs): - super(TextHelp, self).__init__(*args, **kwargs) - self.vbox = QVBoxLayout() - self.vbox.setContentsMargins(0, 0, 0, 0) - #: The :class:`PyQt5.QtWidgets.QPlainTextEdit` instance used for - #: displaying the documentation - self.editor = QPlainTextEdit(parent=self) - self.editor.setFont(QtGui.QFont("Courier New")) - self.vbox.addWidget(self.editor) - self.setLayout(self.vbox) - - def show_rst(self, text, *args, **kwargs): - """Show the given text in the editor window - - Parameters - ---------- - text: str - The text to show - ``*args,**kwargs`` - Are ignored""" - self.editor.clear() - self.editor.insertPlainText(text) - return True - - -class UrlHelp(UrlBrowser, HelpMixin): - """Class to convert rst docstrings to html and show browsers""" - - #: Object containing the necessary fields to describe an object given to - #: the help widget. The descriptor is set up by the :meth:`describe_object` - #: method and contains an additional objtype attribute - object_descriptor = namedtuple( - "ObjectDescriptor", ["obj", "name", "objtype"] - ) - - can_document_object = with_sphinx - can_show_rst = with_sphinx - - #: menu button with different urls - bt_url_menus = None - - #: - sphinx_thread = None - - def __init__(self, *args, **kwargs): - self._temp_dir = "sphinx_dir" not in kwargs - self.sphinx_dir = kwargs.pop("sphinx_dir", mkdtemp(prefix="psyplot_")) - self.build_dir = osp.join(self.sphinx_dir, "_build", "html") - super(UrlHelp, self).__init__(*args, **kwargs) - - self.error_msg = PyErrorMessage(self) - if with_sphinx: - self.sphinx_thread = SphinxThread(self.sphinx_dir) - self.sphinx_thread.html_ready[str].connect(self.browse) - self.sphinx_thread.html_error[str].connect( - self.error_msg.showTraceback - ) - self.sphinx_thread.html_error[str].connect(logger.debug) - rcParams.connect( - "help_explorer.render_docs_parallel", self.reset_sphinx - ) - rcParams.connect( - "help_explorer.use_intersphinx", self.reset_sphinx - ) - rcParams.connect("help_explorer.online", self.reset_sphinx) - - self.bt_connect_console = QToolButton(self) - self.bt_connect_console.setCheckable(True) - if rcParams["console.connect_to_help"]: - self.bt_connect_console.setIcon( - QIcon(get_icon("ipython_console.png")) - ) - self.bt_connect_console.click() - else: - self.bt_connect_console.setIcon( - QIcon(get_icon("ipython_console_t.png")) - ) - self.bt_connect_console.clicked.connect(self.toogle_connect_console) - rcParams.connect( - "console.connect_to_help", self.update_connect_console - ) - self.toogle_connect_console() - - # menu button with different urls - self.bt_url_menus = QToolButton(self) - self.bt_url_menus.setIcon(QIcon(get_icon("docu_button.png"))) - self.bt_url_menus.setToolTip("Browse documentations") - self.bt_url_menus.setPopupMode(QToolButton.InstantPopup) - - docu_menu = QMenu(self) - for name, url in six.iteritems(self.doc_urls): - - def to_url(b, url=url): - self.browse(url) - - action = QAction(name, self) - action.triggered.connect(to_url) - docu_menu.addAction(action) - self.bt_url_menus.setMenu(docu_menu) - - self.button_box.addWidget(self.bt_connect_console) - self.button_box.addWidget(self.bt_url_menus) - # toogle the lock again to set the bt_url_menus enabled state - self.toogle_url_lock() - - def update_connect_console(self, connect): - if ( - connect - and not self.bt_connect_console.isChecked() - or not connect - and self.bt_connect_console.isChecked() - ): - self.bt_connect_console.click() - - def toogle_connect_console(self): - """Disable (or enable) the loading of web pages in www""" - bt = self.bt_connect_console - connect = bt.isChecked() - bt.setIcon( - QIcon( - get_icon( - "ipython_console.png" - if connect - else "ipython_console_t.png" - ) - ) - ) - bt.setToolTip( - "%sonnect the console to the help explorer" - % ("Don't c" if connect else "C") - ) - if rcParams["console.connect_to_help"] is not connect: - rcParams["console.connect_to_help"] = connect - - def reset_sphinx(self, value): - """Method that is called if the configuration changes""" - if with_sphinx and hasattr(self.sphinx_thread, "app"): - del self.sphinx_thread.app - - @docstrings.dedent - def show_help(self, obj, oname="", files=None): - """ - Render the rst docu for the given object with sphinx and show it - - Parameters - ---------- - %(HelpMixin.show_help.parameters)s - """ - if self.bt_lock.isChecked(): - return - return super(UrlHelp, self).show_help(obj, oname=oname, files=files) - - @docstrings.dedent - def show_intro(self, text=""): - """ - Show the intro text in the explorer - - Parameters - ---------- - %(HelpMixin.show_intro.parameters)s""" - if self.sphinx_thread is not None: - with open(self.sphinx_thread.index_file, "a") as f: - f.write( - "\n" + text.strip() + "\n\n" + "Table of Contents\n" - "=================\n\n.. toctree::\n" - ) - self.sphinx_thread.render(None, None) - - def show_rst(self, text, oname="", descriptor=None, files=None): - """Render restructured text with sphinx and show it - - Parameters - ---------- - %(HelpMixin.show_rst.parameters)s""" - if self.bt_lock.isChecked() or self.sphinx_thread is None: - return False - if not oname and descriptor: - oname = descriptor.name - for f in files or []: - shutil.copyfile(f, osp.join(self.sphinx_dir, osp.basename(f))) - self.sphinx_thread.render(text, oname) - return True - - def describe_object(self, obj, oname=""): - """Describe an object using additionaly the object type from the - :meth:`get_objtype` method - - Returns - ------- - instance of :attr:`object_descriptor` - The descriptor of the object""" - return self.object_descriptor(obj, oname, self.get_objtype(obj)) - - def browse(self, url): - """Reimplemented to add file paths to the url string""" - url = asstring(url) - html_file = osp.join(self.sphinx_dir, "_build", "html", url + ".html") - if osp.exists(html_file): - url = file2html(html_file) - super(UrlHelp, self).browse(url) - - def toogle_url_lock(self): - """Disable (or enable) the loading of web pages in www""" - super(UrlHelp, self).toogle_url_lock() - # enable or disable documentation button - bt = self.bt_url_lock - offline = bt.isChecked() - try: - self.bt_url_menus.setEnabled(not offline) - except AttributeError: # not yet initialized - pass - - def url_changed(self, url): - """Reimplemented to remove file paths from the url string""" - try: - url = asstring(url.toString()) - except AttributeError: - pass - if url.startswith("file://"): - fname = html2file(url) - if osp.samefile( - self.build_dir, osp.commonprefix([fname, self.build_dir]) - ): - url = osp.splitext(osp.basename(fname))[0] - super(UrlHelp, self).url_changed(url) - - def header(self, descriptor, sig): - return "%(name)s\n%(bars)s\n\n.. py:%(type)s:: %(name)s%(sig)s\n" % { - "name": descriptor.name, - "bars": "-" * len(descriptor.name), - "type": descriptor.objtype, - "sig": sig, - } - - def get_objtype(self, obj): - """Get the object type of the given object and determine wheter the - object is considered a class, a module, a function, method or data - - Parameters - ---------- - obj: object - - Returns - ------- - str - One out of {'class', 'module', 'function', 'method', 'data'}""" - if inspect.isclass(obj): - return "class" - if inspect.ismodule(obj): - return "module" - if inspect.isfunction(obj) or isinstance(obj, type(all)): - return "function" - if inspect.ismethod(obj) or isinstance(obj, type(str.upper)): - return "method" - return "data" - - def is_importable(self, modname): - """Determine whether members of the given module can be documented with - sphinx by using the :func:`sphinx.util.get_module_source` function - - Parameters - ---------- - modname: str - The __name__ attribute of the module to import - - Returns - ------- - bool - True if sphinx can import the module""" - try: - ModuleAnalyzer.get_module_source(modname) - return True - except Exception: - return False - - def get_doc(self, descriptor): - """Reimplemented to (potentially) use the features from - sphinx.ext.autodoc""" - obj = descriptor.obj - if inspect.ismodule(obj): - module = obj - else: - module = inspect.getmodule(obj) - if module is not None and ( - re.match("__.*__", module.__name__) - or not self.is_importable(module.__name__) - ): - module = None - isclass = inspect.isclass(obj) - # If the module is available, we try to use autodoc - if module is not None: - doc = ".. currentmodule:: " + module.__name__ + "\n\n" - # a module --> use automodule - if inspect.ismodule(obj): - doc += self.header(descriptor, "") - doc += ".. automodule:: " + obj.__name__ - # an importable class --> use autoclass - elif isclass and getattr(module, obj.__name__, None) is not None: - doc += self.header(descriptor, "") - doc += ".. autoclass:: " + obj.__name__ - # an instance and the class can be imported - # --> use super get_doc and autoclass for the tyoe - elif ( - descriptor.objtype == "data" - and getattr(module, type(obj).__name__, None) is not None - ): - doc += "\n\n".join( - [ - super(UrlHelp, self).get_doc(descriptor), - "Class docstring\n===============", - ".. autoclass:: " + type(obj).__name__, - ] - ) - # an instance --> use super get_doc for instance and the type - elif descriptor.objtype == "data": - cls_doc = super(UrlHelp, self).get_doc( - self.describe_object(type(obj), type(obj).__name__) - ) - doc += "\n\n".join( - [ - super(UrlHelp, self).get_doc(descriptor), - "Class docstring\n===============", - cls_doc, - ] - ) - # a function or method --> use super get_doc - else: - doc += super(UrlHelp, self).get_doc(descriptor) - # otherwise the object has been defined in this session - else: - # an instance --> use super get_doc for instance and the type - if descriptor.objtype == "data": - cls_doc = super(UrlHelp, self).get_doc( - self.describe_object(type(obj), type(obj).__name__) - ) - doc = "\n\n".join( - [ - super(UrlHelp, self).get_doc(descriptor), - "Class docstring\n===============", - cls_doc, - ] - ) - # a function or method --> use super get_doc - else: - doc = super(UrlHelp, self).get_doc(descriptor) - return doc.rstrip() + "\n" - - def process_docstring(self, lines, descriptor): - """Process the lines with the napoleon sphinx extension""" - lines = list(chain(*(line.splitlines() for line in lines))) - lines = NumpyDocstring( - lines, - what=descriptor.objtype, - name=descriptor.name, - obj=descriptor.obj, - ).lines() - lines = GoogleDocstring( - lines, - what=descriptor.objtype, - name=descriptor.name, - obj=descriptor.obj, - ).lines() - return indent( - super(UrlHelp, self).process_docstring(lines, descriptor) - ) - - def close(self, *args, **kwargs): - if kwargs.pop("force", False) or ( - not is_running_tests() and self.sphinx_thread is not None - ): - try: - del self.sphinx_thread.app - except AttributeError: - pass - shutil.rmtree(self.build_dir, ignore_errors=True) - if self._temp_dir: - shutil.rmtree(self.sphinx_dir, ignore_errors=True) - del self.sphinx_thread - return super(UrlHelp, self).close(*args, **kwargs) - elif is_running_tests(): - self.bt_url_lock.setChecked(self.bt_url_lock_default) - self.bt_lock.setChecked(self.bt_lock_default) - else: - return super(UrlHelp, self).close(*args, **kwargs) - - -class SphinxThread(QtCore.QThread): - """A thread to render sphinx documentation in a separate process""" - - #: A signal to be emitted when the rendering finished. The url is the - #: file location - html_ready = QtCore.pyqtSignal(str) - html_error = QtCore.pyqtSignal(str) - - def __init__(self, outdir, html_text_no_doc=""): - super(SphinxThread, self).__init__() - self.doc = None - self.name = None - self.html_text_no_doc = html_text_no_doc - self.outdir = outdir - self.index_file = osp.join(self.outdir, "psyplot.rst") - self.confdir = osp.join(get_module_path(__name__), "sphinx_supp") - shutil.copyfile( - osp.join(self.confdir, "psyplot.rst"), - osp.join(self.outdir, "psyplot.rst"), - ) - self.build_dir = osp.join(self.outdir, "_build", "html") - - def render(self, doc, name): - """Render the given rst string and save the file as ``name + '.rst'`` - - Parameters - ---------- - doc: str - The rst docstring - name: str - the name to use for the file""" - if self.wait(): - self.doc = doc - self.name = name - # start rendering in separate process - if rcParams["help_explorer.render_docs_parallel"]: - self.start() - else: - self.run() - - def run(self): - """Create the html file. When called the first time, it may take a - while because the :class:`sphinx.application.Sphinx` app is build, - potentially with intersphinx - - When finished, the html_ready signal is emitted""" - if not hasattr(self, "app"): - from IPython.core.history import HistoryAccessor - - # to avoid history access conflicts between different threads, - # we disable the ipython history - HistoryAccessor.enabled.default_value = False - self.app = Sphinx( - self.outdir, - self.confdir, - self.build_dir, - osp.join(self.outdir, "_build", "doctrees"), - "html", - status=StreamToLogger(logger, logging.DEBUG), - warning=StreamToLogger(logger, logging.DEBUG), - ) - if self.name is not None: - docfile = osp.abspath(osp.join(self.outdir, self.name + ".rst")) - if docfile == self.index_file: - self.name += "1" - docfile = osp.abspath( - osp.join(self.outdir, self.name + ".rst") - ) - html_file = osp.abspath( - osp.join(self.outdir, "_build", "html", self.name + ".html") - ) - if not osp.exists(docfile): - with open(self.index_file, "a") as f: - f.write("\n " + self.name) - with open(docfile, "w") as f: - f.write(self.doc) - else: - html_file = osp.abspath( - osp.join(self.outdir, "_build", "html", "psyplot.html") - ) - try: - self.app.build(None, []) - except Exception: - msg = "Error while building sphinx document %s" % (self.name) - self.html_error.emit("" + msg + "") - logger.debug(msg) - else: - self.html_ready.emit(file2html(html_file)) - - -class HelpExplorer(QWidget, DockMixin): - """A widget for showing the documentation. It behaves somewhat similar - to spyders object inspector plugin and can show restructured text either - as html (if sphinx is installed) or as plain text. It furthermore has a - browser to show html content - - Warnings - -------- - The :class:`HelpBrowser` class is known to crash under PyQt4 when new web - page domains are loaded. Hence you should disable the browsing to different - remote websites and even disable intersphinx""" - - #: The viewer classes used by the help explorer. :class:`HelpExplorer` - #: instances replace this attribute with the corresponding HelpMixin - #: instance - viewers = dict([("HTML help", UrlHelp), ("Plain text", TextHelp)]) - - if not rcParams["help_explorer.use_webengineview"]: - del viewers["HTML help"] - - def __init__(self, *args, **kwargs): - super(HelpExplorer, self).__init__(*args, **kwargs) - self.vbox = vbox = QVBoxLayout() - self.combo = QComboBox(parent=self) - vbox.addWidget(self.combo) - if _viewers: - self.viewers = _viewers.copy() - for w in self.viewers.values(): - w.setParent(self) - else: - self.viewers = dict( - [ - (key, cls(parent=self)) - for key, cls in six.iteritems(self.viewers) - ] - ) - # save the UrlHelp because QWebEngineView creates child processes - # that are not properly closed by PyQt and as such use too much - # memory - if is_running_tests(): - for key, val in self.viewers.items(): - _viewers[key] = val - for key, ini in six.iteritems(self.viewers): - self.combo.addItem(key) - ini.hide() - vbox.addWidget(ini) - self.viewer = next(six.itervalues(self.viewers)) - self.viewer.show() - self.combo.currentIndexChanged[str].connect(self.set_viewer) - self.setLayout(vbox) - - def set_viewer(self, name): - """Sets the current documentation viewer - - Parameters - ---------- - name: str or object - A string must be one of the :attr:`viewers` attribute. An object - can be one of the values in the :attr:`viewers` attribute""" - if isstring(name) and asstring(name) not in self.viewers: - raise ValueError("Don't have a viewer named %s" % (name,)) - elif not isstring(name): - viewer = name - else: - name = asstring(name) - viewer = self.viewers[name] - self.viewer.hide() - self.viewer = viewer - self.viewer.show() - if isstring(name) and not self.combo.currentText() == name: - self.combo.setCurrentIndex(list(self.viewers).index(name)) - - @docstrings.dedent - def show_help(self, obj, oname="", files=None): - """ - Show the documentaion of the given object - - We first try to use the current viewer based upon it's - :attr:`HelpMixin.can_document_object` attribute. If this does not work, - we check the other viewers - - Parameters - ---------- - %(HelpMixin.show_help.parameters)s""" - oname = asstring(oname) - ret = None - if self.viewer.can_document_object: - try: - ret = self.viewer.show_help(obj, oname=oname, files=files) - except Exception: - logger.debug( - "Could not document %s with %s viewer!", - oname, - self.combo.currentText(), - exc_info=True, - ) - else: - curr_i = self.combo.currentIndex() - for i, (viewername, viewer) in enumerate( - six.iteritems(self.viewers) - ): - if i != curr_i and viewer.can_document_object: - self.set_viewer(viewername) - self.combo.blockSignals(True) - self.combo.setCurrentIndex(i) - self.combo.blockSignals(False) - try: - ret = viewer.show_help(obj, oname=oname, files=files) - except Exception: - logger.debug( - "Could not document %s with %s viewer!", - oname, - viewername, - exc_info=True, - ) - if ret: - self.parent().raise_() - return ret - - @docstrings.dedent - def show_rst(self, text, oname="", files=None): - """ - Show restructured text - - We first try to use the current viewer based upon it's - :attr:`HelpMixin.can_show_rst` attribute. If this does not work, - we check the other viewers - - Parameters - ---------- - %(HelpMixin.show_rst.parameters)s""" - ret = None - if self.viewer.can_show_rst: - ret = self.viewer.show_rst(text, oname=oname, files=files) - else: - for viewer in six.itervalues(self.viewers): - if viewer.can_show_rst: - self.set_viewer(viewer) - ret = viewer.show_rst(text, oname=oname, files=files) - break - if ret: - self.parent().raise_() - return ret - - @docstrings.dedent - def show_intro(self, text=""): - """ - Show an intro text - - We first try to use the current viewer based upon it's - :attr:`HelpMixin.can_show_rst` attribute. If this does not work, - we check the other viewers - - Parameters - ---------- - %(HelpMixin.show_intro.parameters)s""" - found = False - for i, viewer in enumerate(six.itervalues(self.viewers)): - viewer.show_intro(text) - if not found and viewer.can_show_rst: - if i: - self.set_viewer(viewer) - found = True - - def close(self, *args, **kwargs): - try: - self.viewers["HTML help"].close(*args, **kwargs) - except (KeyError, AttributeError): - pass - return super(HelpExplorer, self).close(*args, **kwargs) diff --git a/psyplot_gui/icons/console-go.png b/psyplot_gui/icons/console-go.png deleted file mode 100644 index b63bf8e..0000000 Binary files a/psyplot_gui/icons/console-go.png and /dev/null differ diff --git a/psyplot_gui/icons/console-go.png.license b/psyplot_gui/icons/console-go.png.license deleted file mode 100644 index eaac5c9..0000000 --- a/psyplot_gui/icons/console-go.png.license +++ /dev/null @@ -1,4 +0,0 @@ -SPDX-FileCopyrightText: 2024 Helmholtz-Zentrum hereon GmbH -SPDX-FileCopyrightText: 2024 Fonticons, Inc. (https://fontawesome.com) - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/psyplot_gui/icons/console-go.svg b/psyplot_gui/icons/console-go.svg deleted file mode 100644 index 50f6e60..0000000 --- a/psyplot_gui/icons/console-go.svg +++ /dev/null @@ -1 +0,0 @@ - diff --git a/psyplot_gui/icons/console-go.svg.license b/psyplot_gui/icons/console-go.svg.license deleted file mode 100644 index 23f2891..0000000 --- a/psyplot_gui/icons/console-go.svg.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2024 Fonticons, Inc. (https://fontawesome.com) - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/psyplot_gui/icons/copy.png b/psyplot_gui/icons/copy.png deleted file mode 100644 index 78ba5fd..0000000 Binary files a/psyplot_gui/icons/copy.png and /dev/null differ diff --git a/psyplot_gui/icons/copy.png.license b/psyplot_gui/icons/copy.png.license deleted file mode 100644 index eaac5c9..0000000 --- a/psyplot_gui/icons/copy.png.license +++ /dev/null @@ -1,4 +0,0 @@ -SPDX-FileCopyrightText: 2024 Helmholtz-Zentrum hereon GmbH -SPDX-FileCopyrightText: 2024 Fonticons, Inc. (https://fontawesome.com) - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/psyplot_gui/icons/copy.svg b/psyplot_gui/icons/copy.svg deleted file mode 100644 index 2d21436..0000000 --- a/psyplot_gui/icons/copy.svg +++ /dev/null @@ -1 +0,0 @@ - diff --git a/psyplot_gui/icons/copy.svg.license b/psyplot_gui/icons/copy.svg.license deleted file mode 100644 index 23f2891..0000000 --- a/psyplot_gui/icons/copy.svg.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2024 Fonticons, Inc. (https://fontawesome.com) - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/psyplot_gui/icons/docu_button.png b/psyplot_gui/icons/docu_button.png deleted file mode 100644 index 1986e4a..0000000 Binary files a/psyplot_gui/icons/docu_button.png and /dev/null differ diff --git a/psyplot_gui/icons/docu_button.png.license b/psyplot_gui/icons/docu_button.png.license deleted file mode 100644 index eaac5c9..0000000 --- a/psyplot_gui/icons/docu_button.png.license +++ /dev/null @@ -1,4 +0,0 @@ -SPDX-FileCopyrightText: 2024 Helmholtz-Zentrum hereon GmbH -SPDX-FileCopyrightText: 2024 Fonticons, Inc. (https://fontawesome.com) - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/psyplot_gui/icons/docu_button.svg b/psyplot_gui/icons/docu_button.svg deleted file mode 100644 index 5867e10..0000000 --- a/psyplot_gui/icons/docu_button.svg +++ /dev/null @@ -1 +0,0 @@ - diff --git a/psyplot_gui/icons/docu_button.svg.license b/psyplot_gui/icons/docu_button.svg.license deleted file mode 100644 index 23f2891..0000000 --- a/psyplot_gui/icons/docu_button.svg.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2024 Fonticons, Inc. (https://fontawesome.com) - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/psyplot_gui/icons/info.png b/psyplot_gui/icons/info.png deleted file mode 100644 index 3ddc946..0000000 Binary files a/psyplot_gui/icons/info.png and /dev/null differ diff --git a/psyplot_gui/icons/info.png.license b/psyplot_gui/icons/info.png.license deleted file mode 100644 index eaac5c9..0000000 --- a/psyplot_gui/icons/info.png.license +++ /dev/null @@ -1,4 +0,0 @@ -SPDX-FileCopyrightText: 2024 Helmholtz-Zentrum hereon GmbH -SPDX-FileCopyrightText: 2024 Fonticons, Inc. (https://fontawesome.com) - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/psyplot_gui/icons/info.svg b/psyplot_gui/icons/info.svg deleted file mode 100644 index 94f36ee..0000000 --- a/psyplot_gui/icons/info.svg +++ /dev/null @@ -1 +0,0 @@ - diff --git a/psyplot_gui/icons/info.svg.license b/psyplot_gui/icons/info.svg.license deleted file mode 100644 index 23f2891..0000000 --- a/psyplot_gui/icons/info.svg.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2024 Fonticons, Inc. 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(https://fontawesome.com) - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/psyplot_gui/icons/invalid.svg b/psyplot_gui/icons/invalid.svg deleted file mode 100644 index 9ce28ec..0000000 --- a/psyplot_gui/icons/invalid.svg +++ /dev/null @@ -1 +0,0 @@ - diff --git a/psyplot_gui/icons/invalid.svg.license b/psyplot_gui/icons/invalid.svg.license deleted file mode 100644 index 23f2891..0000000 --- a/psyplot_gui/icons/invalid.svg.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2024 Fonticons, Inc. (https://fontawesome.com) - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/psyplot_gui/icons/ipython_console.png b/psyplot_gui/icons/ipython_console.png deleted file mode 100644 index 1aca205..0000000 Binary files a/psyplot_gui/icons/ipython_console.png and /dev/null differ diff --git a/psyplot_gui/icons/ipython_console.png.license b/psyplot_gui/icons/ipython_console.png.license deleted file mode 100644 index b21fae9..0000000 --- a/psyplot_gui/icons/ipython_console.png.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/psyplot_gui/icons/ipython_console_t.png b/psyplot_gui/icons/ipython_console_t.png deleted file mode 100644 index cf88e6d..0000000 Binary files a/psyplot_gui/icons/ipython_console_t.png and /dev/null differ diff --git a/psyplot_gui/icons/ipython_console_t.png.license b/psyplot_gui/icons/ipython_console_t.png.license deleted file mode 100644 index b21fae9..0000000 --- a/psyplot_gui/icons/ipython_console_t.png.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/psyplot_gui/icons/lock.png b/psyplot_gui/icons/lock.png deleted file mode 100644 index 73f3439..0000000 Binary files a/psyplot_gui/icons/lock.png and /dev/null differ diff --git a/psyplot_gui/icons/lock.png.license b/psyplot_gui/icons/lock.png.license deleted file mode 100644 index eaac5c9..0000000 --- a/psyplot_gui/icons/lock.png.license +++ /dev/null @@ -1,4 +0,0 @@ -SPDX-FileCopyrightText: 2024 Helmholtz-Zentrum hereon GmbH -SPDX-FileCopyrightText: 2024 Fonticons, Inc. (https://fontawesome.com) - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/psyplot_gui/icons/lock.svg b/psyplot_gui/icons/lock.svg deleted file mode 100644 index 4cc7733..0000000 --- a/psyplot_gui/icons/lock.svg +++ /dev/null @@ -1 +0,0 @@ - diff --git a/psyplot_gui/icons/lock.svg.license b/psyplot_gui/icons/lock.svg.license deleted file mode 100644 index 23f2891..0000000 --- a/psyplot_gui/icons/lock.svg.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2024 Fonticons, Inc. 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(https://fontawesome.com) - -SPDX-License-Identifier: CC-BY-4.0 diff --git a/psyplot_gui/main.py b/psyplot_gui/main.py deleted file mode 100644 index 4700231..0000000 --- a/psyplot_gui/main.py +++ /dev/null @@ -1,1261 +0,0 @@ -"""Core module for the psyplot graphical user interface - -This module redefines the :class:`psyplot.project.Project` class with -additional features for an interactive usage with graphical qt user interface. -There is no need to import this module because the -:class:`GuiProject` class defined here replaces the project class in the -:mod:`psyplot.project` module.""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -import errno -import logging -import os -import pickle -import socket -import sys -from collections import OrderedDict, defaultdict -from functools import partial -from threading import Thread - -import matplotlib as mpl -import psyplot -import psyplot.data as psyd -import psyplot.plotter as psyp -import psyplot.project as psy -import six -import xarray as xr -from psyplot.config.rcsetup import get_configdir -from psyplot.docstring import docstrings -from psyplot.utils import get_default_value - -import psyplot_gui -from psyplot_gui import rcParams -from psyplot_gui.common import PyErrorMessage, StreamToLogger, get_icon -from psyplot_gui.compat.qtcompat import ( - QAction, - QActionGroup, - QApplication, - QDesktopWidget, - QFileDialog, - QIcon, - QInputDialog, - QKeySequence, - QLabel, - QMainWindow, - QMenu, - QMessageBox, - Qt, - QtCore, - with_qt5, -) -from psyplot_gui.console import ConsoleWidget -from psyplot_gui.content_widget import ( - DatasetTree, - FiguresTree, - ProjectContentWidget, -) -from psyplot_gui.dataframeeditor import DataFrameEditor -from psyplot_gui.dependencies import DependenciesDialog -from psyplot_gui.fmt_widget import FormatoptionWidget -from psyplot_gui.help_explorer import HelpExplorer -from psyplot_gui.plot_creator import PlotCreator -from psyplot_gui.preferences import ( - GuiRcParamsWidget, - Prefences, - PsyRcParamsWidget, -) - -# change backend here before the project module is imported -backend = rcParams["backend"] -if backend is not None: - if backend == "psyplot": - backend = "module://psyplot_gui.backend" - mpl.use(backend) - - -#: The :class:`PyQt5.QtWidgets.QMainWindow` of the graphical user interface -mainwindow = None - - -def _set_mainwindow(obj): - global mainwindow - mainwindow = obj - - -class MainWindow(QMainWindow): - #: A signal that is emmitted when the a signal is received through the - #: open_files_server - open_external = QtCore.pyqtSignal(list) - - #: The server to open external files - open_files_server = None - - #: Inprocess console - console = None - - #: tree widget displaying the open datasets - ds_tree = None - - #: list of figures from the psyplot backend - figures = [] - - #: tree widget displaying the open figures - figures_tree = None - - #: general formatoptions widget - fmt_widget = None - - #: help explorer - help_explorer = None - - #: the DataFrameEditor widgets, a widget to show and edit data frames - dataframeeditors = None - - #: tab widget displaying the arrays in current main and sub project - project_content = None - - #: The dockwidgets of this instance - dockwidgets = [] - - #: default widths of the dock widgets - default_widths = {} - - _is_open = False - - #: The keyboard shortcuts of the default layout - default_shortcuts = [] - - #: The current keyboard shortcuts - current_shortcuts = [] - - #: The key for the central widget for the main window in the - #: :attr:`plugins` dictionary - central_widget_key = "console" - - @property - def logger(self): - """The logger of this instance""" - return logging.getLogger( - "%s.%s" % (self.__class__.__module__, self.__class__.__name__) - ) - - @docstrings.get_sections(base="MainWindow") - @docstrings.dedent - def __init__(self, show=True): - """ - Parameters - ---------- - show: bool - If True, the created mainwindow is show - """ - if sys.stdout is None: - sys.stdout = StreamToLogger(self.logger) - if sys.stderr is None: - sys.stderr = StreamToLogger(self.logger) - super(MainWindow, self).__init__() - self.setWindowIcon(QIcon(get_icon("logo.png"))) - - #: list of figures from the psyplot backend - self.figures = [] - self.error_msg = PyErrorMessage(self) - self.setDockOptions( - QMainWindow.AnimatedDocks - | QMainWindow.AllowNestedDocks - | QMainWindow.AllowTabbedDocks - ) - #: Inprocess console - self.console = ConsoleWidget(self) - self.project_actions = {} - - self.config_pages = [] - - self.open_file_options = OrderedDict( - [ - ("new psyplot plot from dataset", self.open_external_files), - ("new psyplot project", partial(self.open_external_files, [])), - ] - ) - - # --------------------------------------------------------------------- - # ----------------------------- Menus --------------------------------- - # --------------------------------------------------------------------- - - # ######################## File menu ################################## - - # --------------------------- New plot -------------------------------- - - self.file_menu = QMenu("File", parent=self) - self.new_plot_action = QAction("New plot", self) - self.new_plot_action.setStatusTip( - "Use an existing dataset (or open a new one) to create one or " - "more plots" - ) - self.register_shortcut(self.new_plot_action, QKeySequence.New) - self.new_plot_action.triggered.connect(lambda: self.new_plots(True)) - self.file_menu.addAction(self.new_plot_action) - - # --------------------------- Open project ---------------------------- - - self.open_project_menu = QMenu("Open project", self) - self.file_menu.addMenu(self.open_project_menu) - - self.open_mp_action = QAction("New main project", self) - self.register_shortcut(self.open_mp_action, QKeySequence.Open) - self.open_mp_action.setStatusTip("Open a new main project") - self.open_mp_action.triggered.connect(self.open_mp) - self.open_project_menu.addAction(self.open_mp_action) - - self.open_sp_action = QAction("Add to current", self) - - self.register_shortcut( - self.open_sp_action, - QKeySequence("Ctrl+Shift+O", QKeySequence.NativeText), - ) - self.open_sp_action.setStatusTip( - "Load a project as a sub project and add it to the current main " - "project" - ) - self.open_sp_action.triggered.connect(self.open_sp) - self.open_project_menu.addAction(self.open_sp_action) - - # ---------------------- load preset menu ----------------------------- - - self.load_preset_menu = QMenu("Load preset", parent=self) - self.file_menu.addMenu(self.load_preset_menu) - - self.load_sp_preset_action = self.load_preset_menu.addAction( - "For selection", self.load_sp_preset - ) - self.load_sp_preset_action.setStatusTip( - "Load a preset for the selected project" - ) - - self.load_mp_preset_action = self.load_preset_menu.addAction( - "For full project", self.load_mp_preset - ) - self.load_sp_preset_action.setStatusTip( - "Load a preset for the full project" - ) - - # ----------------------- Save project -------------------------------- - - self.save_project_menu = QMenu("Save", parent=self) - self.file_menu.addMenu(self.save_project_menu) - - self.save_mp_action = QAction("Full psyplot project", self) - self.save_mp_action.setStatusTip( - "Save the entire project into a pickle file" - ) - self.register_shortcut(self.save_mp_action, QKeySequence.Save) - self.save_mp_action.triggered.connect(self.save_mp) - self.save_project_menu.addAction(self.save_mp_action) - - self.save_sp_action = QAction("Selected psyplot project", self) - self.save_sp_action.setStatusTip( - "Save the selected sub project into a pickle file" - ) - self.save_sp_action.triggered.connect(self.save_sp) - self.save_project_menu.addAction(self.save_sp_action) - - # ------------------------ Save project as ---------------------------- - - self.save_project_as_menu = QMenu("Save as", parent=self) - self.file_menu.addMenu(self.save_project_as_menu) - - self.save_mp_as_action = QAction("Full psyplot project", self) - self.save_mp_as_action.setStatusTip( - "Save the entire project into a pickle file" - ) - self.register_shortcut(self.save_mp_as_action, QKeySequence.SaveAs) - self.save_mp_as_action.triggered.connect( - partial(self.save_mp, new_fname=True) - ) - self.save_project_as_menu.addAction(self.save_mp_as_action) - - self.save_sp_as_action = QAction("Selected psyplot project", self) - self.save_sp_as_action.setStatusTip( - "Save the selected sub project into a pickle file" - ) - self.save_sp_as_action.triggered.connect( - partial(self.save_sp, new_fname=True) - ) - self.save_project_as_menu.addAction(self.save_sp_as_action) - - # ------------------------ Save preset -------------------------------- - - self.save_preset_menu = QMenu("Save preset", parent=self) - self.file_menu.addMenu(self.save_preset_menu) - - self.save_sp_preset_action = self.save_preset_menu.addAction( - "Selection", self.save_sp_preset - ) - self.save_sp_preset_action.setStatusTip( - "Save the formatoptions of the selected project as a preset" - ) - - self.save_mp_preset_action = self.save_preset_menu.addAction( - "Full project", self.save_mp_preset - ) - self.save_sp_preset_action.setStatusTip( - "Save the formatoptions of the full project as a preset" - ) - - # -------------------------- Pack project ----------------------------- - - self.pack_project_menu = QMenu("Zip project files", parent=self) - self.file_menu.addMenu(self.pack_project_menu) - - self.pack_mp_action = QAction("Full psyplot project", self) - self.pack_mp_action.setStatusTip( - "Pack all the data of the main project into one folder" - ) - self.pack_mp_action.triggered.connect(partial(self.save_mp, pack=True)) - self.pack_project_menu.addAction(self.pack_mp_action) - - self.pack_sp_action = QAction("Selected psyplot project", self) - self.pack_sp_action.setStatusTip( - "Pack all the data of the current sub project into one folder" - ) - self.pack_sp_action.triggered.connect(partial(self.save_sp, pack=True)) - self.pack_project_menu.addAction(self.pack_sp_action) - - # ------------------------ Export figures ----------------------------- - - self.export_project_menu = QMenu("Export figures", parent=self) - self.file_menu.addMenu(self.export_project_menu) - - self.export_mp_action = QAction("Full psyplot project", self) - self.export_mp_action.setStatusTip( - "Pack all the data of the main project into one folder" - ) - self.export_mp_action.triggered.connect(self.export_mp) - self.register_shortcut( - self.export_mp_action, - QKeySequence("Ctrl+E", QKeySequence.NativeText), - ) - self.export_project_menu.addAction(self.export_mp_action) - - self.export_sp_action = QAction("Selected psyplot project", self) - self.export_sp_action.setStatusTip( - "Pack all the data of the current sub project into one folder" - ) - self.register_shortcut( - self.export_sp_action, - QKeySequence("Ctrl+Shift+E", QKeySequence.NativeText), - ) - self.export_sp_action.triggered.connect(self.export_sp) - self.export_project_menu.addAction(self.export_sp_action) - - # ------------------------ Close project ------------------------------ - - self.file_menu.addSeparator() - - self.close_project_menu = QMenu("Close project", parent=self) - self.file_menu.addMenu(self.close_project_menu) - - self.close_mp_action = QAction("Full psyplot project", self) - self.register_shortcut( - self.close_mp_action, - QKeySequence("Ctrl+Shift+W", QKeySequence.NativeText), - ) - self.close_mp_action.setStatusTip( - "Close the main project and delete all data and plots out of " - "memory" - ) - self.close_mp_action.triggered.connect( - lambda: psy.close(psy.gcp(True).num) - ) - self.close_project_menu.addAction(self.close_mp_action) - - self.close_sp_action = QAction("Selected psyplot project", self) - self.close_sp_action.setStatusTip( - "Close the selected arrays project and delete all data and plots " - "out of memory" - ) - self.register_shortcut(self.close_sp_action, QKeySequence.Close) - self.close_sp_action.triggered.connect( - lambda: psy.gcp().close(True, True) - ) - self.close_project_menu.addAction(self.close_sp_action) - - # ----------------------------- Quit ---------------------------------- - - if sys.platform != "darwin": # mac os makes this anyway - self.quit_action = QAction("Quit", self) - self.quit_action.triggered.connect(self.close) - self.quit_action.triggered.connect( - QtCore.QCoreApplication.instance().quit - ) - self.register_shortcut(self.quit_action, QKeySequence.Quit) - self.file_menu.addAction(self.quit_action) - - self.menuBar().addMenu(self.file_menu) - - # ######################## Console menu ############################### - - self.console_menu = QMenu("Console", self) - self.console_menu.addActions(self.console.actions()) - self.menuBar().addMenu(self.console_menu) - - # ######################## Windows menu ############################### - - self.windows_menu = QMenu("Windows", self) - self.menuBar().addMenu(self.windows_menu) - - # ############################ Help menu ############################## - - self.help_menu = QMenu("Help", parent=self) - self.menuBar().addMenu(self.help_menu) - - # -------------------------- Preferences ------------------------------ - - self.help_action = QAction("Preferences", self) - self.help_action.triggered.connect(lambda: self.edit_preferences(True)) - self.register_shortcut(self.help_action, QKeySequence.Preferences) - self.help_menu.addAction(self.help_action) - - # ---------------------------- About ---------------------------------- - - self.about_action = QAction("About", self) - self.about_action.triggered.connect(self.about) - self.help_menu.addAction(self.about_action) - - # ---------------------------- Dependencies --------------------------- - - self.dependencies_action = QAction("Dependencies", self) - self.dependencies_action.triggered.connect( - lambda: self.show_dependencies(True) - ) - self.help_menu.addAction(self.dependencies_action) - - self.dockwidgets = [] - - # --------------------------------------------------------------------- - # -------------------------- Dock windows ----------------------------- - # --------------------------------------------------------------------- - #: tab widget displaying the arrays in current main and sub project - #: tree widget displaying the open datasets - self.project_content = ProjectContentWidget(parent=self) - self.ds_tree = DatasetTree(parent=self) - #: tree widget displaying the open figures - self.figures_tree = FiguresTree(parent=self) - #: help explorer - self.help_explorer = help_explorer = HelpExplorer(parent=self) - if ( - "HTML help" in help_explorer.viewers - and help_explorer.viewers["HTML help"].sphinx_thread is not None - ): - help_explorer.viewers[ - "HTML help" - ].sphinx_thread.html_ready.connect(self.focus_on_console) - #: the DataFrameEditor widgets - self.dataframeeditors = [] - #: general formatoptions widget - self.fmt_widget = FormatoptionWidget( - parent=self, help_explorer=help_explorer, console=self.console - ) - - # load plugin widgets - self.plugins = plugins = OrderedDict( - [ - ("console", self.console), - ("project_content", self.project_content), - ("ds_tree", self.ds_tree), - ("figures_tree", self.figures_tree), - ("help_explorer", self.help_explorer), - ("fmt_widget", self.fmt_widget), - ] - ) - self.default_plugins = list(plugins) - for plugin_name, w_class in six.iteritems(rcParams.load_plugins()): - plugins[plugin_name] = w_class(parent=self) - - self.add_mp_to_menu() - psy.Project.oncpchange.connect(self.eventually_add_mp_to_menu) - self.windows_menu.addSeparator() - - self.window_layouts_menu = QMenu("Window layouts", self) - self.restore_layout_action = QAction("Restore default layout", self) - self.restore_layout_action.triggered.connect(self.setup_default_layout) - self.window_layouts_menu.addAction(self.restore_layout_action) - self.windows_menu.addMenu(self.window_layouts_menu) - - self.panes_menu = QMenu("Panes", self) - self.windows_menu.addMenu(self.panes_menu) - - self.dataframe_menu = QMenu("DataFrame editors", self) - self.dataframe_menu.addAction( - "New Editor", - partial(self.new_data_frame_editor, None, "DataFrame Editor"), - ) - self.dataframe_menu.addSeparator() - self.windows_menu.addMenu(self.dataframe_menu) - - self.central_widgets_menu = menu = QMenu("Central widget", self) - self.windows_menu.addMenu(menu) - self.central_widgets_actions = group = QActionGroup(self) - group.setExclusive(True) - - # --------------------------------------------------------------------- - # -------------------------- connections ------------------------------ - # --------------------------------------------------------------------- - - self.console.help_explorer = help_explorer - psyp.default_print_func = partial( - help_explorer.show_rst, oname="formatoption_docs" - ) - psy.PlotterInterface._print_func = psyp.default_print_func - self.setCentralWidget(self.console) - - # make sure that the plots are shown between the project content and - # the help explorer widget - self.setCorner(Qt.TopLeftCorner, Qt.LeftDockWidgetArea) - self.setCorner(Qt.TopRightCorner, Qt.RightDockWidgetArea) - - # make sure that the formatoption widgets are shown between the - # project content and the help explorer widget - self.setCorner(Qt.BottomLeftCorner, Qt.LeftDockWidgetArea) - self.setCorner(Qt.BottomRightCorner, Qt.RightDockWidgetArea) - - # --------------------------------------------------------------------- - # ------------------------------ closure ------------------------------ - # --------------------------------------------------------------------- - if show: - self.help_explorer.show_intro(self.console.intro_msg) - - # --------------------------------------------------------------------- - # ------------------------- open_files_server ------------------------- - # --------------------------------------------------------------------- - self.callbacks = { - "new_plot": self.open_external.emit, - "change_cwd": self._change_cwd, - "run_script": self.console.run_script.emit, - "command": self.console.run_command.emit, - } - - # Server to open external files on a single instance - self.open_files_server = socket.socket( - socket.AF_INET, socket.SOCK_STREAM, socket.IPPROTO_TCP - ) - - if rcParams["main.listen_to_port"]: - self._file_thread = Thread(target=self.start_open_files_server) - self._file_thread.setDaemon(True) - self._file_thread.start() - - self.open_external.connect(self._open_external_files) - - self.config_pages.extend([GuiRcParamsWidget, PsyRcParamsWidget]) - - # display the statusBar - statusbar = self.statusBar() - self.figures_label = QLabel() - statusbar.addWidget(self.figures_label) - self.plugin_label = QLabel() - statusbar.addWidget(self.plugin_label) - - self.default_widths = {} - - self.setup_default_layout() - - if show: - self.showMaximized() - - # save the default widths after they have been shown - for w in self.plugins.values(): - if w.dock is not None: - self.default_widths[w] = w.dock.size().width() - - # hide plugin widgets that should be hidden at startup. Although this - # has been executed by :meth:`setup_default_layout`, we have to execute - # it again after the call of showMaximized - for name, w in self.plugins.items(): - if name != self.central_widget_key: - w.to_dock(self) - if w.hidden: - w.hide_plugin() - else: - w.create_central_widget_action(self).setChecked(True) - - self._is_open = True - - def focus_on_console(self, *args, **kwargs): - """Put focus on the ipython console""" - self.console._control.setFocus() - - def new_data_frame_editor(self, df=None, title="DataFrame Editor"): - """Open a new dataframe editor - - Parameters - ---------- - df: pandas.DataFrame - The dataframe to display - title: str - The title of the dock window - - Returns - ------- - psyplot_gui.dataframeeditor.DataFrameEditor - The newly created editor""" - editor = DataFrameEditor() - self.dataframeeditors.append(editor) - editor.to_dock(self, title, Qt.RightDockWidgetArea, docktype="df") - if df is not None: - editor.set_df(df) - editor.show_plugin() - editor.maybe_tabify() - editor.raise_() - return editor - - def setup_default_layout(self): - """Set up the default window layout""" - self.project_content.to_dock( - self, "Plot objects", Qt.LeftDockWidgetArea - ) - self.ds_tree.to_dock(self, "Datasets", Qt.LeftDockWidgetArea) - self.figures_tree.to_dock(self, "Figures", Qt.LeftDockWidgetArea) - self.help_explorer.to_dock( - self, "Help explorer", Qt.RightDockWidgetArea - ) - self.fmt_widget.to_dock(self, "Formatoptions", Qt.BottomDockWidgetArea) - - modify_widths = bool(self.default_widths) - for w in map(self.plugins.__getitem__, self.default_plugins): - if w.dock is not None: - w.show_plugin() - - if modify_widths and with_qt5: - self.resizeDocks( - [w.dock], [self.default_widths[w]], Qt.Horizontal - ) - - # hide plugin widgets that should be hidden at startup - for name, w in self.plugins.items(): - if name != self.central_widget_key: - w.to_dock(self) - if w.hidden: - w.hide_plugin() - - action2shortcut = defaultdict(list) - for s, a in self.default_shortcuts: - action2shortcut[a].append(s) - - for a, s in action2shortcut.items(): - self.register_shortcut(a, s) - - def set_central_widget(self, name): - """Set the central widget - - Parameters - ---------- - name: str or QWidget - The key or the plugin widget in the :attr:`plugins` dictionary""" - from PyQt5.QtCore import QTimer - - self.setUpdatesEnabled(False) - current = self.centralWidget() - if isinstance(name, six.string_types): - new = self.plugins[name] - else: - new = name - name = next(key for key, val in self.plugins.items() if val is new) - if new is not current: - self._dock_widths = dock_widths = OrderedDict() - self._dock_heights = dock_heights = OrderedDict() - for key, w in self.plugins.items(): - if w.dock is not None and w.is_shown: - s = w.dock.size() - dock_widths[w] = s.width() - if w is not new: - dock_heights[w] = s.height() - - new_pos = self.dockWidgetArea(new.dock) - - self.removeDockWidget(new.dock) - new.dock.close() - self.panes_menu.removeAction(new._view_action) - self.dataframe_menu.removeAction(new._view_action) - new.dock = new._view_action = None - self.central_widget_key = name - current.to_dock(self) - self.setCentralWidget(new) - new._set_central_action.setChecked(True) - current.show_plugin() - current.to_dock(self) - new_width = dock_widths.pop(new, None) - if current.hidden: - current.hide_plugin() - else: - current_pos = self.dockWidgetArea(current.dock) - if current_pos == new_pos and new_width: - dock_widths[current] = new_width - - self._custom_layout_timer = QTimer(self) - self._custom_layout_timer.timeout.connect(self._reset_dock_widths) - self._custom_layout_timer.setSingleShot(True) - self._custom_layout_timer.start(5000) - - def _reset_dock_widths(self): - # resize the plugins - if with_qt5: - for w, width in self._dock_widths.items(): - if w.dock is not None: - self.resizeDocks([w.dock], [width], Qt.Horizontal) - for w, height in self._dock_heights.items(): - if w.dock is not None: - self.resizeDocks([w.dock], [height], Qt.Vertical) - - self.setUpdatesEnabled(True) - - def _save_project(self, p, new_fname=False, *args, **kwargs): - if new_fname or "project_file" not in p.attrs: - fname = QFileDialog.getSaveFileName( - self, - "Project destination", - os.getcwd(), - "Pickle files (*.pkl);;" "All files (*)", - ) - if with_qt5: # the filter is passed as well - fname = fname[0] - if not fname: - return - else: - fname = p.attrs["project_file"] - try: - p.save_project(fname, *args, **kwargs) - except Exception: - self.error_msg.showTraceback("Could not save the project!") - else: - p.attrs["project_file"] = fname - if p.is_main: - self.update_project_action(p.num) - - def load_mp_preset(self): - self._load_preset(psy.gcp(True)) - - def load_sp_preset(self): - self._load_preset(psy.gcp()) - - def _load_preset(self, project, *args, **kwargs): - fname, ok = QFileDialog.getOpenFileName( - self, - "Load preset", - os.path.join(get_configdir(), "presets"), - "YAML files (*.yml *.yaml);;" "All files (*)", - ) - if ok: - project.load_preset(fname, *args, **kwargs) - - def open_mp(self, *args, **kwargs): - """Open a new main project""" - self._open_project(main=True) - - def open_sp(self, *args, **kwargs): - """Open a subproject and add it to the current main project""" - self._open_project(main=False) - - def _open_project(self, *args, **kwargs): - fname = QFileDialog.getOpenFileName( - self, - "Project file", - os.getcwd(), - "Pickle files (*.pkl);;" "All files (*)", - ) - if with_qt5: # the filter is passed as well - fname = fname[0] - if not fname: - return - p = psy.Project.load_project(fname, *args, **kwargs) - p.attrs["project_file"] = fname - self.update_project_action(p.num) - - def save_mp(self, *args, **kwargs): - """Save the current main project.""" - self._save_project(psy.gcp(True), **kwargs) - - def save_sp(self, *args, **kwargs): - """Save the current sub project.""" - self._save_project(psy.gcp(), **kwargs) - - def save_sp_preset(self): - self._save_preset(psy.gcp()) - - def save_mp_preset(self): - self._save_preset(psy.gcp(True)) - - def _save_preset(self, project, *args, **kwargs): - fname, ok = QFileDialog.getSaveFileName( - self, - "Save preset", - os.path.join(get_configdir(), "presets"), - "YAML file (*.yml *.yaml);;" "All files (*)", - ) - if ok: - project.save_preset(fname, *args, **kwargs) - - def _export_project(self, p, *args, **kwargs): - fname = QFileDialog.getSaveFileName( - self, - "Picture destination", - os.getcwd(), - "PDF files (*.pdf);;" - "Postscript file (*.ps);;" - "PNG image (*.png);;" - "JPG image (*.jpg *.jpeg);;" - "TIFF image (*.tif *.tiff);;" - "GIF image (*.gif);;" - "All files (*)", - ) - if with_qt5: # the filter is passed as well - fname = fname[0] - if not fname: - return - try: - p.export(fname, *args, **kwargs) - except Exception: - self.error_msg.showTraceback( - "Could not export the figures!" - ) - - def export_mp(self, *args, **kwargs): - self._export_project(psy.gcp(True), **kwargs) - - def export_sp(self, *args, **kwargs): - self._export_project(psy.gcp(), **kwargs) - - def new_plots(self, exec_=None): - if hasattr(self, "plot_creator"): - try: - self.plot_creator.close() - except RuntimeError: - pass - self.plot_creator = PlotCreator( - help_explorer=self.help_explorer, parent=self - ) - available_width = QDesktopWidget().availableGeometry().width() // 3 - width = self.plot_creator.sizeHint().width() - height = self.plot_creator.sizeHint().height() - # The plot creator window should cover at least one third of the screen - self.plot_creator.resize(max(available_width, width), height) - if exec_: - self.plot_creator.exec_() - - def excepthook(self, type, value, traceback): - """A method to replace the sys.excepthook""" - self.error_msg.excepthook(type, value, traceback) - - def edit_preferences(self, exec_=None): - """Edit Spyder preferences""" - if hasattr(self, "preferences"): - try: - self.preferences.close() - except RuntimeError: - pass - self.preferences = dlg = Prefences(self) - for PrefPageClass in self.config_pages: - widget = PrefPageClass(dlg) - widget.initialize() - dlg.add_page(widget) - available_width = int( - 0.667 * QDesktopWidget().availableGeometry().width() - ) - width = dlg.sizeHint().width() - height = dlg.sizeHint().height() - # The preferences window should cover at least one third of the screen - dlg.resize(max(available_width, width), height) - if exec_: - dlg.exec_() - - def about(self): - """About the tool""" - versions = { - key: d["version"] for key, d in psyplot.get_versions(False).items() - } - versions.update(psyplot_gui.get_versions()["requirements"]) - versions.update(psyplot._get_versions()["requirements"]) - versions["github"] = "https://github.com/psyplot/psyplot" - versions["author"] = psyplot.__author__ - QMessageBox.about( - self, - "About psyplot", - """psyplot: Interactive data visualization with python -
Copyright © 2017- Philipp Sommer -
Licensed under the terms of the GNU General Public License v2 - (GPLv2) -

Created by %(author)s

-

Most of the icons come from the - Fontawesom.

-

For bug reports and feature requests, please go - to our Github website or contact the - author via mail.

-

This package uses (besides others) the following packages:
-

    -
  • psyplot %(psyplot)s
    • -
  • Python %(python)s
    • -
  • numpy %(numpy)s
    • -
  • xarray %(xarray)s
    • -
  • pandas %(pandas)s
    • -
  • psyplot_gui %(psyplot_gui)s
    • -
  • Qt %(qt)s
    • -
  • PyQt %(pyqt)s
    • -
  • qtconsole %(qtconsole)s
    • -

-

For a full list of requirements see the dependencies - in the Help menu.

-

This software is provided "as is", without warranty or support - of any kind.

""" - % versions, - ) - - def show_dependencies(self, exec_=None): - """Open a dialog that shows the dependencies""" - if hasattr(self, "dependencies"): - try: - self.dependencies.close() - except RuntimeError: - pass - self.dependencies = dlg = DependenciesDialog( - psyplot.get_versions(), parent=self - ) - dlg.resize(630, 420) - if exec_: - dlg.exec_() - - def reset_rcParams(self): - rcParams.update_from_defaultParams() - psy.rcParams.update_from_defaultParams() - - def add_mp_to_menu(self): - mp = psy.gcp(True) - action = QAction( - os.path.basename( - mp.attrs.get("project_file", "Untitled %s*" % mp.num) - ), - self, - ) - action.setStatusTip("Make project %s the current project" % mp.num) - action.triggered.connect(lambda: psy.scp(psy.project(mp.num))) - self.project_actions[mp.num] = action - self.windows_menu.addAction(action) - - def update_project_action(self, num): - action = self.project_actions.get(num) - p = psy.project(num) - if action: - action.setText( - os.path.basename( - p.attrs.get("project_file", "Untitled %s*" % num) - ) - ) - - def eventually_add_mp_to_menu(self, p): - for num in set(self.project_actions).difference( - psy.get_project_nums() - ): - self.windows_menu.removeAction(self.project_actions.pop(num)) - if p is None or not p.is_main: - return - if p.num not in self.project_actions: - self.add_mp_to_menu() - - def start_open_files_server(self): - """This method listens to the open_files_port and opens the plot - creator for new files - - This method is inspired and to most parts copied from spyder""" - self.open_files_server.setsockopt( - socket.SOL_SOCKET, socket.SO_REUSEADDR, 1 - ) - port = rcParams["main.open_files_port"] - try: - self.open_files_server.bind(("127.0.0.1", port)) - except Exception: - return - self.open_files_server.listen(20) - while 1: # 1 is faster than True - try: - req, dummy = self.open_files_server.accept() - except socket.error as e: - # See Issue 1275 for details on why errno EINTR is - # silently ignored here. - eintr = errno.EINTR - # To avoid a traceback after closing on Windows - if e.args[0] == eintr: - continue - # handle a connection abort on close error - enotsock = ( - errno.WSAENOTSOCK if os.name == "nt" else errno.ENOTSOCK - ) - if e.args[0] in [errno.ECONNABORTED, enotsock]: - return - raise - args = pickle.loads(req.recv(1024)) - callback = args[0] - func = self.callbacks[callback] - self.logger.debug("Emitting %s callback %s", callback, func) - func(args[1:]) - req.sendall(b" ") - - def change_cwd(self, path): - """Change the current working directory""" - import os - - os.chdir(path) - - def _change_cwd(self, args): - path = args[0][0] - self.change_cwd(path) - - docstrings.keep_params( - "make_plot.parameters", - "fnames", - "project", - "engine", - "plot_method", - "name", - "dims", - "encoding", - "enable_post", - "seaborn_style", - "concat_dim", - "chname", - "preset", - "decoder", - ) - - def open_files(self, fnames): - """Open a file and ask the user how""" - fnames_s = ", ".join(map(os.path.basename, fnames)) - if len(fnames_s) > 30: - fnames_s = fnames_s[:27] + "..." - item, ok = QInputDialog.getItem( - self, - "Open file...", - "Open %s as..." % fnames_s, - list(self.open_file_options), - current=0, - editable=False, - ) - if ok: - return self.open_file_options[item](fnames) - - @docstrings.get_sections(base="MainWindow.open_external_files") - @docstrings.dedent - def open_external_files( - self, - fnames=[], - project=None, - engine=None, - plot_method=None, - name=None, - dims=None, - encoding=None, - enable_post=False, - seaborn_style=None, - concat_dim=get_default_value(xr.open_mfdataset, "concat_dim"), - chname={}, - preset=None, - decoder=None, - ): - """ - Open external files - - Parameters - ---------- - %(make_plot.parameters.fnames|project|engine|plot_method|name|dims|encoding|enable_post|seaborn_style|concat_dim|chname|preset|decoder)s - """ - if seaborn_style is not None: - import seaborn as sns - - sns.set_style(seaborn_style) - if project is not None: - fnames = [s.split(",") for s in fnames] - if not isinstance(project, dict): - project = psyd.safe_list(project)[0] - single_files = (files[0] for files in fnames if len(files) == 1) - alternative_paths = defaultdict(lambda: next(single_files, None)) - alternative_paths.update( - list(files for files in fnames if len(files) == 2) - ) - p = psy.Project.load_project( - project, - alternative_paths=alternative_paths, - engine=engine, - main=not psy.gcp(), - encoding=encoding, - enable_post=enable_post, - chname=chname, - ) - if preset: - p.load_preset(preset) - if isinstance(project, six.string_types): - p.attrs.setdefault("project_file", project) - return True - else: - self.new_plots(False) - self.plot_creator.open_dataset( - fnames, engine=engine, concat_dim=concat_dim - ) - if name == "all": - ds = self.plot_creator.get_ds() - name = sorted(set(ds.variables) - set(ds.coords)) - self.plot_creator.insert_array( - list(filter(None, psy.safe_list(name))) - ) - if dims is not None: - ds = self.plot_creator.get_ds() - dims = { - key: ", ".join(map(str, val)) - for key, val in six.iteritems(dims) - } - for i, vname in enumerate( - self.plot_creator.array_table.vnames - ): - self.plot_creator.array_table.selectRow(i) - self.plot_creator.array_table.update_selected() - self.plot_creator.array_table.selectAll() - var = ds[vname[0]] - self.plot_creator.array_table.update_selected( - dims=var.psy.decoder.correct_dims(var, dims.copy()) - ) - if preset: - self.plot_creator.set_preset(preset) - if plot_method: - self.plot_creator.pm_combo.setCurrentIndex( - self.plot_creator.pm_combo.findText(plot_method) - ) - if decoder: - self.plot_creator.set_decoder(decoder) - self.plot_creator.exec_() - return True - - def _open_external_files(self, args): - self.open_external_files(*args) - - @classmethod - @docstrings.get_sections(base="MainWindow.run") - @docstrings.dedent - def run( - cls, - fnames=[], - project=None, - engine=None, - plot_method=None, - name=None, - dims=None, - encoding=None, - enable_post=False, - seaborn_style=None, - concat_dim=get_default_value(xr.open_mfdataset, "concat_dim"), - chname={}, - preset=None, - decoder=None, - show=True, - ): - """ - Create a mainwindow and open the given files or project - - This class method creates a new mainwindow instance and sets the - global :attr:`mainwindow` variable. - - Parameters - ---------- - %(MainWindow.open_external_files.parameters)s - %(MainWindow.parameters)s - - Notes - ----- - - There can be only one mainwindow at the time - - This method does not create a QApplication instance! See - :meth:`run_app` - - See Also - -------- - run_app - """ - mainwindow = cls(show=show) - _set_mainwindow(mainwindow) - if fnames or project: - mainwindow.open_external_files( - fnames, - project, - engine, - plot_method, - name, - dims, - encoding, - enable_post, - seaborn_style, - concat_dim, - chname, - preset, - decoder, - ) - psyplot.with_gui = True - return mainwindow - - def register_shortcut( - self, action, shortcut, context=Qt.ApplicationShortcut - ): - """Register an action for a shortcut""" - shortcuts = psy.safe_list(shortcut) - for j, shortcut in enumerate(shortcuts): - found = False - for i, (s, a) in enumerate(self.current_shortcuts): - if s == shortcut: - new_shortcuts = [ - sc - for sc in self.current_shortcuts[i][1].shortcuts() - if sc != s - ] - a.setShortcut(QKeySequence()) - if new_shortcuts: - a.setShortcuts(new_shortcuts) - self.current_shortcuts[i][1] = action - found = True - break - if not found: - self.default_shortcuts.append([shortcut, action]) - self.current_shortcuts.append([shortcut, action]) - action.setShortcuts(shortcuts) - action.setShortcutContext(context) - - @classmethod - @docstrings.dedent - def run_app(cls, *args, **kwargs): - """ - Create a QApplication, open the given files or project and enter the - mainloop - - Parameters - ---------- - %(MainWindow.run.parameters)s - - See Also - -------- - run - """ - app = QApplication(sys.argv) - cls.run(*args, **kwargs) - sys.exit(app.exec_()) - - def closeEvent(self, event): - """closeEvent reimplementation""" - if not self._is_open or (self._is_open and self.close()): - self._is_open = False - event.accept() - - def close(self): - _set_mainwindow(None) - if self.open_files_server is not None: - self.open_files_server.close() - del self.open_files_server - for widget in self.plugins.values(): - widget.close() - self.plugins.clear() - return super(MainWindow, self).close() diff --git a/psyplot_gui/plot_creator.py b/psyplot_gui/plot_creator.py deleted file mode 100644 index 98afaf5..0000000 --- a/psyplot_gui/plot_creator.py +++ /dev/null @@ -1,2433 +0,0 @@ -"""This module contains a widget to create new plots with psyplot - -The main class is the :class:`PlotCreator` which is used to handle the -different plotting methods of the :class:`psyplot.project.ProjectPlotter` -class""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -from __future__ import division - -import logging -import os -import re -import types -from collections import defaultdict -from functools import partial -from itertools import chain, cycle, product, repeat, starmap -from math import floor - -import matplotlib as mpl -import numpy as np -import psyplot.project as psy -import six -import xarray -from psyplot.config.rcsetup import get_configdir -from psyplot.utils import _temp_bool_prop - -from psyplot_gui.common import ( - ListValidator, - LoadFromConsoleButton, - PyErrorMessage, - get_icon, -) -from psyplot_gui.compat.qtcompat import ( - QAbstractItemView, - QAction, - QCheckBox, - QComboBox, - QDialog, - QDialogButtonBox, - QDoubleValidator, - QFileDialog, - QGraphicsRectItem, - QGraphicsScene, - QGraphicsView, - QGridLayout, - QHBoxLayout, - QIcon, - QIntValidator, - QLabel, - QLineEdit, - QListView, - QMenu, - QPushButton, - QSplitter, - QStyledItemDelegate, - Qt, - QTableWidget, - QTableWidgetItem, - QTabWidget, - QtCore, - QToolButton, - QValidator, - QVBoxLayout, - QWidget, - asstring, - isstring, - with_qt5, -) -from psyplot_gui.preferences import RcParamsTree - -logger = logging.getLogger(__name__) - - -class CoordComboBox(QComboBox): - """Combobox showing coordinate information of a dataset - - This combobox loads its data from the current dataset and allows the - popups to be left open. It also has a :attr:`leftclick` signal that is - emitted when the popup is about to be closed because the user clicked on a - value""" - - close_popups = _temp_bool_prop("close_popups", default=True) - use_coords = _temp_bool_prop("use_coords", default=False) - leftclick = QtCore.pyqtSignal(QComboBox) - - def __init__(self, ds_func, dim, parent=None): - """ - Parameters - ---------- - ds_func: function - The function that, when called without arguments, returns the - xarray.Dataset to use - dim: str - The coordinate name for this combobox - parent: PyQt5.QtWidgets.QWidget - The parent widget""" - super(CoordComboBox, self).__init__(parent) - self.dim = dim - self._is_empty = True - self.get_ds = ds_func - self._changed = False - self._right_clicked = False - - # modify the view - view = self.view() - # We allow the selection of multiple items with a left-click - view.setSelectionMode(QListView.ExtendedSelection) - # The following modifications will cause this behaviour: - # Left-click: - # Case 1: Any of the already existing plot arrays is selected - # Add the selected values in the popup to the dimension in - # the currently selected plot items - # Case 2: No plot arrays are selected or none exists - # Create new plot items from the selection in the popup - # Right-Click: - # Set the currentIndex which will be used when new plot items - # are created - # - # Therefore we first enable a CustomContextMenu - view.setContextMenuPolicy(Qt.CustomContextMenu) - - # We have to disable the default MousePressEvent in the views viewport - # because otherwise the Left-click behaviour would occur as well when - # hitting the right button - # Therefore: - # install an EventFilter such that only the customContextMenuRequested - # signal of the view is fired and not the pressed signal (which would - # hide the popup) - view.viewport().installEventFilter(self) - view.customContextMenuRequested.connect(self.right_click) - # Furthermore we implement, that the pop up shall not be closed if the - # keep open property is True. Therefore we have to track when the - # index changes - view.pressed.connect(self.handleItemPressed) - view.doubleClicked.connect(self.hide_anyway) - - def eventFilter(self, obj, event): - """Reimplemented to filter right-click events on the view()""" - ret = ( - event.type() == QtCore.QEvent.MouseButtonPress - ) and event.button() == Qt.RightButton - return ret - - def handleItemPressed(self, index): - """Function to be called when an item is pressed to make sure that - we know whether anything changed before closing the popup""" - item = self.model().itemFromIndex(index) - if item.checkState() == Qt.Checked: - item.setCheckState(Qt.Unchecked) - else: - item.setCheckState(Qt.Checked) - self.setCurrentIndex(0) - self._changed = True - - def right_click(self, point): - """Function that is called when an item is right_clicked""" - ind = self.view().indexAt(point).row() - self.setCurrentIndex(ind) - self._right_clicked = True - self._changed = True - - def hide_anyway(self, index=None): - """Function to hide the popup despite of the :attr:`_changed` attribute""" - self._changed = True - self.hidePopup() - - def hidePopup(self): - """Reimplemented to only close the popup when the :attr:`close_popup` - attribute is True or it is clicked outside the window""" - if not self._right_clicked: - self.leftclick.emit(self) - if not self._changed or self.close_popups: - super(CoordComboBox, self).hidePopup() - self._changed = False - self._right_clicked = False - - def mousePressEvent(self, *args, **kwargs): - """Reimplemented to fill the box with content from the dataset""" - self.load_coord() - super(CoordComboBox, self).mousePressEvent(*args, **kwargs) - - def mouseDoubleClickEvent(self, *args, **kwargs): - """Reimplemented to fill the box with content from the dataset""" - self.load_coord() - super(CoordComboBox, self).mouseDoubleClickEvent(*args, **kwargs) - - def load_coord(self): - """Load the coordinate data from the dataset and fill the combobox with - it (if it is empty)""" - if self._is_empty: - ds = self.get_ds() - self.addItem("") - if self.use_coords: - self.addItems(ds[self.dim].astype(str).values) - else: - self.addItems(list(map(str, range(len(ds[self.dim]))))) - self._is_empty = False - - -class ArrayNameValidator(QValidator): - """Class to make sure that only those arrays names are inserted that are - not currently in the main project or the tree""" - - def __init__(self, text, table, *args, **kwargs): - super(ArrayNameValidator, self).__init__(*args, **kwargs) - self.table = table - self.current_text = text - self.current_names = list(table.current_names) - - def fixup(self, s): - s = asstring(s) - if not s: - return self.table.next_available_name() - return self.table.next_available_name(s + "_{0}") - - def validate(self, s, pos): - s = asstring(s) - if not s: - return QValidator.Intermediate, s, pos - elif s == self.current_text: - pass - elif s in chain(psy.gcp(True).arr_names, self.current_names): - return QValidator.Intermediate, s, pos - return QValidator.Acceptable, s, pos - - -class ArrayNameItemDelegate(QStyledItemDelegate): - """Delegate using the :class:`ArrayNameValidator` for validation""" - - def createEditor(self, widget, option, index): - if not index.isValid(): - return - editor = QLineEdit(widget) - item = self.parent().item(index.row(), index.column()) - validator = ArrayNameValidator( - item.text() if item else "", self.parent(), editor - ) - editor.setValidator(validator) - return editor - - -class VariableItemDelegate(QStyledItemDelegate): - """Delegate alowing only the variables in the parents dataset. - - The parent must hold a `get_ds` method that returns a dataset when called - """ - - def createEditor(self, widget, option, index): - if not index.isValid(): - return - editor = QLineEdit(widget) - ds = self.parent().get_ds() - validator = ListValidator( - ds.variables.keys(), self.parent().sep, editor - ) - editor.setValidator(validator) - return editor - - -class VariablesTable(QTableWidget): - """Table to display the variables of a dataset""" - - #: The variables in the dataset - variables = [] - - @property - def selected_variables(self): - """The currently selected variables""" - return [ - self.variables[i] - for i in map( - list(map(asstring, self.variables)).index, - sorted( - set( - item.text() - for item in self.selectedItems() - if item.column() == 0 - ) - ), - ) - ] - - def __init__( - self, get_func, columns=["long_name", "dims", "shape"], *args, **kwargs - ): - """ - Parameters - ---------- - get_func: function - The function that, when called without arguments, returns the - xarray.Dataset to use - columns: list of str - The attribute that will be used as columns for the variables""" - super(VariablesTable, self).__init__(*args, **kwargs) - self.variables = [] - self.get_ds = get_func - self.set_columns(columns) - self.setEditTriggers(QAbstractItemView.NoEditTriggers) - self.verticalHeader().setVisible(False) - - def set_columns(self, columns=None): - if columns is None: - columns = self.column_labels - else: - self.column_labels = columns - self.setColumnCount(len(columns) + 1) - self.setHorizontalHeaderLabels(["variable"] + columns) - - def fill_from_ds(self, ds=None): - """Clear the table and insert items from the given `dataset`""" - self.clear() - self.set_columns() - if ds is None: - ds = self.get_ds() - if ds is None: - return - coords = list(ds.coords) - self.variables = vnames = [v for v in ds.variables if v not in coords] - self.setRowCount(len(vnames)) - for i, vname in enumerate(vnames): - variable = ds.variables[vname] - self.setItem(i, 0, QTableWidgetItem(asstring(vname))) - for j, attr in enumerate(self.column_labels, 1): - if attr == "dims": - self.setItem( - i, j, QTableWidgetItem(", ".join(variable.dims)) - ) - else: - self.setItem( - i, - j, - QTableWidgetItem( - str( - variable.attrs.get( - attr, getattr(variable, attr, "") - ) - ) - ), - ) - - -class CoordsTable(QTableWidget): - """A table showing the coordinates of in a dataset via instances of - :class:`CoordComboBox`""" - - def __init__(self, get_func, *args, **kwargs): - """ - Parameters - ---------- - get_func: function - The function that, when called without arguments, returns the - xarray.Dataset to use - ``*args, **kwargs`` - Determined by the :class:`PyQt5.QtWidgets.QTableWidget` class""" - super(CoordsTable, self).__init__(*args, **kwargs) - self.get_ds = get_func - self.setEditTriggers(QAbstractItemView.NoEditTriggers) - self.setRowCount(1) - self.verticalHeader().setVisible(False) - self.horizontalHeader().setStretchLastSection(True) - self.verticalHeader().setStretchLastSection(True) - - @property - def combo_boxes(self): - """A list of :class:`CoordComboBox` in this table""" - return list( - filter( - lambda w: w is not None, - (self.cellWidget(0, i) for i in range(self.columnCount())), - ) - ) - - def fill_from_ds(self, ds=None): - """Clear the table and create new comboboxes""" - for cb in self.combo_boxes: - cb.blockSignals(True) - self.clear() - if ds is None: - ds = self.get_ds() - if ds is None: - return - coords = list(ds.coords) - vnames = [v for v in ds.variables if v not in coords] - self.dims = dims = list( - set(chain(*(ds.variables[vname].dims for vname in vnames))) - ) - try: - dims.sort() - except TypeError: - pass - self.setColumnCount(len(dims)) - for i, dim in enumerate(dims): - header_item = QTableWidgetItem(dim) - self.setHorizontalHeaderItem(i, header_item) - self.setCellWidget(0, i, CoordComboBox(self.get_ds, dim)) - - def sizeHint(self): - """Reimplemented to adjust the heigth based upon the header and the - first row""" - return QtCore.QSize( - super(CoordsTable, self).sizeHint().width(), - self.horizontalHeader().height() + self.rowHeight(0), - ) - - -class DragDropTable(QTableWidget): - """Table that allows to exchange rows via drag and drop - - This class was mainly taken from - http://stackoverflow.com/questions/26227885/drag-and-drop-rows-within-qtablewidget - """ - - def __init__(self, *args, **kwargs): - super(DragDropTable, self).__init__(*args, **kwargs) - - self.setDragEnabled(True) - self.setAcceptDrops(True) - self.viewport().setAcceptDrops(True) - self.setDragDropOverwriteMode(False) - self.setDropIndicatorShown(True) - - self.setSelectionMode(QAbstractItemView.ExtendedSelection) - self.setSelectionBehavior(QAbstractItemView.SelectRows) - self.setDragDropMode(QAbstractItemView.InternalMove) - - def dropEvent(self, event): - if event.source() == self and ( - event.dropAction() == Qt.MoveAction - or self.dragDropMode() == QAbstractItemView.InternalMove - ): - self.dropOn(event) - - else: - super(DragDropTable, self).dropEvent(event) - - def moveRows(self, row, remove=False): - """Move all selected rows to the given `row`""" - selRows = sorted({ind.row() for ind in self.selectedIndexes()}) - top = selRows[0] - - dropRow = row - if dropRow == -1: - dropRow = self.rowCount() - offset = dropRow - top - - for i, row in enumerate(selRows): - r = row + offset - if r > self.rowCount() or r < 0: - r = 0 - self.insertRow(r) - - selRows = sorted({ind.row() for ind in self.selectedIndexes()}) - - top = selRows[0] - offset = dropRow - top - for i, row in enumerate(selRows): - r = row + offset - if r > self.rowCount() or r < 0: - r = 0 - - for j in range(self.columnCount()): - source = QTableWidgetItem(self.item(row, j)) - self.setItem(r, j, source) - - if remove: - for row in reversed(selRows): - self.removeRow(row) - - def droppingOnItself(self, event, index): - dropAction = event.dropAction() - - if self.dragDropMode() == QAbstractItemView.InternalMove: - dropAction = Qt.MoveAction - - if ( - event.source() == self - and event.possibleActions() & Qt.MoveAction - and dropAction == Qt.MoveAction - ): - selectedIndexes = self.selectedIndexes() - child = index - while child.isValid() and child != self.rootIndex(): - if child in selectedIndexes: - return True - child = child.parent() - - return False - - def dropOn(self, event): - if event.isAccepted(): - return False, None, None, None - - index = QtCore.QModelIndex() - row = -1 - - if self.viewport().rect().contains(event.pos()): - index = self.indexAt(event.pos()) - if not index.isValid() or not self.visualRect(index).contains( - event.pos() - ): - index = self.rootIndex() - - if self.model().supportedDropActions() & event.dropAction(): - if index != self.rootIndex(): - dropIndicatorPosition = self.position( - event.pos(), self.visualRect(index), index - ) - - if dropIndicatorPosition == QAbstractItemView.AboveItem: - row = index.row() - # index = index.parent() - elif dropIndicatorPosition == QAbstractItemView.BelowItem: - row = index.row() + 1 - # index = index.parent() - else: - row = index.row() - - if not self.droppingOnItself(event, index): - self.moveRows(row, remove=event.source() is None) - event.accept() - - def position(self, pos, rect, index): - r = QAbstractItemView.OnViewport - margin = 2 - if pos.y() - rect.top() < margin: - r = QAbstractItemView.AboveItem - elif rect.bottom() - pos.y() < margin: - r = QAbstractItemView.BelowItem - elif rect.contains(pos, True): - r = QAbstractItemView.OnItem - - if r == QAbstractItemView.OnItem and not ( - self.model().flags(index) & Qt.ItemIsDropEnabled - ): - if pos.y() < rect.center().y(): - r = QAbstractItemView.AboveItem - else: - r = QAbstractItemView.BelowItem - return r - - -class ArrayTable(DragDropTable): - """Table that shows the arrays that will be used for plotting - - It contains the following columns: - - 1. The variable column which holds the variable names of the arrays. - multiple variables may be separated by ';;' - 2. The array name. The :attr:`psyplot.data.InteractiveBase.arr_name` - attribute. Depending on the plot methods - :attr:`~psyplot.project._PlotterInterface._prefer_list`, multiple - array names are allowed or not. If this attribute is True, - arrays with the same array name will be concatenated into one - :class:`psyplot.data.InteractiveList` - 3. The axes column. Use the right-click context menu to select a - subplot - 4. The check column. Checks for variable names, array names, axes and - dimensions via the :meth:`psyplot.project._PlotterInterface.check_data` - method - 5. Columns containing the dimension informations""" - - #: Pattern to interprete subplots - subplot_patt = re.compile( - r"\((?P\d+),\s*" # figure - r"(?P\d+),\s*" # rows - r"(?P\d+),\s*" # columns - r"(?P\d+),\s*" # position - r"(?P\d+)\s*\)" # end subplot - ) - - #: pattern to interprete arbitrary axes - axes_patt = re.compile( - r"\((?P\d+),\s*" # figure - r"(?P0*\.\d+),\s*" # lower left x - r"(?P0*\.\d+),\s*" # lower left y - r"(?P0*\.\d+),\s*" # upper right x - r"(?P0*\.\d+)\s*\)" # upper right y - ) - - #: The separator for variable names - sep = ";;" - - #: Tool tip for the variable column - VARIABLE_TT = ( - "The variables of the array from the dataset. Multiple" - "variables for one array may be separated by '%s'" % (sep) - ) - - #: Base tool tip for a dimension column - DIMS_TT = ( - "The values for dimension %s." - " You can use integers either explicit, e.g." - "
    " - "
  • 1, 2, 3, ...,
    • " - "
" - "or slices like start:end:step, e.g." - "
    " - "
  • '1:6:2'
    • " - "
" - "where the latter is equivalent to '1, 3, 5'" - ) - - def dropEvent(self, event): - """Reimplemented to call the :meth:`check_arrays` after the call""" - # apparently the row deletion occurs after the call of this method. - # therefore our call of `check_arrays` leads to the (wrong) result - # of a duplicated entry. We therefore filter them out here and make - # sure that those arrays are not considered when checking for - # duplicates - messages = dict( - zip(self.current_names, [msg for b, msg in self.check_arrays()]) - ) - super(ArrayTable, self).dropEvent(event) - ignores = [ - arr_name - for arr_name, msg in messages.items() - if not msg.startswith("Found duplicated entry of") - ] - self.check_arrays(ignore_duplicates=ignores) - - @property - def prefer_list(self): - """Return the _prefer_list attribute of the plot_method""" - return self.plot_method and self.plot_method._prefer_list - - @property - def current_names(self): - """The names that are currently in use""" - if self.prefer_list: - return [] - arr_col = self.arr_col - return [ - asstring(item.text()) - for item in filter( - None, - map(lambda i: self.item(i, arr_col), range(self.rowCount())), - ) - ] - - @property - def vnames(self): - """The list of variable names per array""" - var_col = self.var_col - return [ - self.item(i, var_col).text().split(";;") - for i in range(self.rowCount()) - ] - - @property - def arr_names_dict(self): - """The final dictionary containing the array names necessary for the - `arr_names` parameter in the - :meth:`psyplot.data.ArrayList.from_dataset` method""" - ret = dict() - arr_col = self.arr_col - for irow in range(self.rowCount()): - arr_name = asstring(self.item(irow, arr_col).text()) - if self.plot_method and self.plot_method._prefer_list: - d = ret.setdefault(arr_name, defaultdict(list)) - d["name"].append(self._get_variables(irow)) - for key, val in self._get_dims(irow).items(): - d[key].append(val) - else: - ret[arr_name] = d = {"name": self._get_variables(irow)} - d.update(self._get_dims(irow)) - - return ret - - @property - def axes(self): - """A list of axes settings corresponding to the arrays in the - :attr:`arr_names_dict`""" - ret = [] - d = set() - arr_col = self.arr_col - axes_col = self.axes_col - # get the projection - pm = self.plot_method - kwargs = {} - if pm is not None: - projection = self.plot_method.plotter_cls._get_sample_projection() - if projection is not None: - kwargs["projection"] = projection - for irow in range(self.rowCount()): - arr_name = self.item(irow, arr_col).text() - if arr_name in d: - continue - d.add(arr_name) - axes_type, args = self.axes_info(self.item(irow, axes_col)) - if axes_type == "subplot": - ret.append(SubplotCreator.create_subplot(*args, **kwargs)) - elif axes_type == "axes": - ret.append(AxesCreator.create_axes(*args, **kwargs)) - else: - ret.append(None) - return ret - - @property - def var_col(self): - """The index of the variable column""" - return self.desc_cols.index(self.VARIABLE_LABEL) - - @property - def arr_col(self): - """The index of the array name column""" - return self.desc_cols.index(self.ARRAY_LABEL) - - @property - def axes_col(self): - """The index of the axes column""" - return self.desc_cols.index(self.AXES_LABEL) - - @property - def check_col(self): - """The index of the check column""" - return self.desc_cols.index(self.CHECK_LABEL) - - def __init__(self, get_func, columns=[], *args, **kwargs): - """ - Parameters - ---------- - get_func: function - The function that, when called without arguments, returns the - xarray.Dataset to use - columns: list of str - The coordinates in the dataset""" - super(ArrayTable, self).__init__(*args, **kwargs) - self.get_ds = get_func - self.VARIABLE_LABEL = "variable" - self.ARRAY_LABEL = "array name" - self.AXES_LABEL = "axes" - self.CHECK_LABEL = "check" - self.desc_cols = [ - self.VARIABLE_LABEL, - self.ARRAY_LABEL, - self.AXES_LABEL, - self.CHECK_LABEL, - ] - self.plot_method = None - self.setSelectionBehavior(QAbstractItemView.SelectRows) - self.setContextMenuPolicy(Qt.CustomContextMenu) - self.customContextMenuRequested.connect(self.showAxesCreator) - self.set_columns(columns) - self.setItemDelegateForColumn(self.var_col, VariableItemDelegate(self)) - self.setItemDelegateForColumn( - self.arr_col, ArrayNameItemDelegate(self) - ) - self.itemChanged.connect(self.check_item) - self.itemChanged.connect(self.update_other_items) - - def set_columns(self, columns): - """Set the columns of the table - - Parameters - ---------- - columns: list of str - The coordinates in the dataset""" - if columns is None: - columns = self.column_labels - else: - self.column_labels = columns - self.setColumnCount(len(columns) + len(self.desc_cols)) - self.setHorizontalHeaderLabels(self.desc_cols + columns) - for i, col in enumerate(columns, len(self.desc_cols)): - self.horizontalHeaderItem(i).setToolTip(self.DIMS_TT % col) - self.horizontalHeaderItem(self.var_col).setToolTip(self.VARIABLE_TT) - - def setup_from_ds(self, ds=None, plot_method=None): - """Fill the table based upon the given dataset. - - Parameters - ---------- - ds: xarray.Dataset or None - If None, the dataset from the :attr:`get_ds` function is used - plot_method: psyplot.project._PlotterInterface or None - The plot method of the :class:`psyplot.project.ProjectPlotter` - class or None if no plot shall be made""" - self.clear() - self.setRowCount(0) - if ds is None: - ds = self.get_ds() - if plot_method is not None: - self.set_pm(plot_method) - if ds is None: - self.set_columns([]) - return - coords = list(ds.coords) - vnames = [v for v in ds.variables if v not in coords] - self.dims = dims = list( - set(chain(*(ds.variables[vname].dims for vname in vnames))) - ) - try: - dims.sort() - except TypeError: - pass - self.set_columns(dims) - - def next_available_name(self, *args, **kwargs): - """Gives the next possible name to use""" - counter = iter(range(1000)) - current_names = self.current_names - mp = psy.gcp(True) - while True: - name = mp.next_available_name(*args, counter=counter, **kwargs) - if name not in current_names: - return name - - def insert_array(self, name, check=True, **kwargs): - """Appends the settings for an array the the list in a new row""" - dims = set(self.get_ds().variables[name].dims) - irow = self.rowCount() - self.setRowCount(irow + 1) - self.setItem(irow, 0, QTableWidgetItem(asstring(name))) - self.setItem(irow, 1, QTableWidgetItem(self.next_available_name())) - self.setItem(irow, 2, QTableWidgetItem("")) - for dim in dims.intersection(kwargs): - icol = len(self.desc_cols) + self.dims.index(dim) - self.setItem(irow, icol, QTableWidgetItem(kwargs[dim])) - if check: - self.check_array(irow) - - def remove_arrays(self, selected=True): - """Remove array rows from the list - - Parameters - ---------- - selected: bool - If True, only the selected rows are removed""" - if selected: - irows = sorted({ind.row() for ind in self.selectedIndexes()}) - else: - irows = list(range(self.rowCount())) - for irow in irows[::-1]: - self.removeRow(irow) - - def update_selected(self, check=True, dims={}): - """Updates the dimensions of the selectiond arrays with the given - `dims` - - Parameters - ---------- - check: bool - whether the array shall be checked afterwards - dims: dict - a mapping from coordinate names to string values that shall be - appended to the current text""" - ds = self.get_ds() - irows = {item.row() for item in self.selectedItems()} - var_col = self.desc_cols.index(self.VARIABLE_LABEL) - for irow in irows: - vname = ( - asstring(self.item(irow, var_col).text()) - .split(self.sep)[0] - .strip() - ) - var_dims = set(ds.variables[vname].dims) - for dim in var_dims.intersection(dims): - icol = len(self.desc_cols) + self.dims.index(dim) - item = self.item(irow, icol) - curr_text = asstring(item.text()) - if curr_text: - curr_text += ", " - item.setText(curr_text + dims[dim]) - if check: - for irow in irows: - self.check_array(irow) - - def add_subplots(self, rows, cols, maxn=None): - """Add multiple subplots to the selected arrays""" - import matplotlib.pyplot as plt - - irows = sorted({ind.row() for ind in self.selectedIndexes()}) - irows = irows or list(range(self.rowCount())) - maxn = maxn or rows * cols - figs = chain( - *([i] * maxn for i in range(1, 1000) if i not in plt.get_fignums()) - ) - nums = cycle(range(1, maxn + 1)) - seen = set() - axes_col = self.desc_cols.index(self.AXES_LABEL) - arr_col = self.desc_cols.index(self.ARRAY_LABEL) - for irow in irows: - arr_item = self.item(irow, arr_col) - if arr_item is None or arr_item.text() in seen: - continue - seen.add(arr_item.text()) - num = next(nums) - text = "(%i, %i, %i, %i, %i)" % (next(figs), rows, cols, num, num) - item = QTableWidgetItem(text) - self.setItem(irow, axes_col, item) - - def add_single_subplot(self, rows, cols, row, col): - """Add one subplot to the selected arrays on multiple figures""" - import matplotlib.pyplot as plt - - irows = sorted({ind.row() for ind in self.selectedIndexes()}) - irows = irows or list(range(self.rowCount())) - figs = (num for num in range(1, 1000) if num not in plt.get_fignums()) - num = (row - 1) * rows + col - seen = set() - axes_col = self.desc_cols.index(self.AXES_LABEL) - arr_col = self.desc_cols.index(self.ARRAY_LABEL) - for irow in irows: - arr_item = self.item(irow, arr_col) - if arr_item is None or arr_item.text() in seen: - continue - seen.add(arr_item.text()) - text = "(%i, %i, %i, %i, %i)" % (next(figs), rows, cols, num, num) - item = QTableWidgetItem(text) - self.setItem(irow, axes_col, item) - - def showAxesCreator(self, pos): - """Context menu for right-click on a row""" - irows = sorted({ind.row() for ind in self.selectedIndexes()}) - if not irows: - return - menu = QMenu(self) - menu.addAction(self.axes_creator_action(irows)) - menu.exec_(self.mapToGlobal(pos)) - - def axes_creator_action(self, rows): - """Action to open a :class:`AxesCreatorCollection` for the selected - rows""" - axes_col = self.desc_cols.index(self.AXES_LABEL) - items = [self.item(row, axes_col) for row in rows] - action = QAction("Select subplot", self) - types_and_args = list( - filter(lambda t: t[0], map(self.axes_info, items)) - ) - types = [t[0] for t in types_and_args] - if types and all(t == types[0] for t in types): - if types[0] == "subplot": - creator_kws = ["fig", "rows", "cols", "num1", "num2"] - elif types[0] == "axes": - creator_kws = ["fig", "x0", "y0", "x1", "y1"] - else: - creator_kws = [] - func_name = types[0] - args = [t[1] for t in types_and_args] - - #: the initialization keywords of the :class:`SubplotCreator` class - kwargs = {} - - if len(items) > 0: - kwargs["fig"] = "" - - for kw, vals in zip(creator_kws, zip(*args)): - if all(val == vals[0] for val in vals): - kwargs[kw] = vals[0] - else: - func_name = None - kwargs = {} - - action.triggered.connect( - self._open_axes_creator(items, func_name, kwargs) - ) - return action - - def _change_axes(self, items, iterator): - seen = set() - arr_col = self.desc_cols.index(self.ARRAY_LABEL) - for item, text in zip(items, iterator): - arr_name = self.item(item.row(), arr_col).text() - if arr_name in seen: - continue - seen.add(arr_name) - item.setText(text) - - def _open_axes_creator(self, items, func_name, kwargs): - def func(): - if hasattr(self, "_axes_creator"): - self._axes_creator.close() - self._axes_creator = obj = AxesCreatorCollection( - func_name, kwargs, parent=self - ) - obj.okpressed.connect(partial(self._change_axes, items)) - obj.exec_() - - return func - - def axes_info(self, s): - """Interpretes an axes information""" - s = asstring(s) if isstring(s) else asstring(s.text()) - m = self.subplot_patt.match(s) - if m: - return "subplot", list(map(int, m.groups())) - m = self.axes_patt.match(s) - if m: - return "axes", [int(m.groupdict()["fig"])] + list( - map(float, m.groups()[1:]) - ) - return None, None - - def set_pm(self, s): - """Set the plot method""" - s = asstring(s) - self.plot_method = getattr(psy.plot, s, None) - self.check_arrays() - - def check_item(self, item): - """Check the array corresponding to the given item""" - if item.column() == self.desc_cols.index(self.CHECK_LABEL): - return - for irow in range(self.rowCount()): - other_item = self.item( - irow, self.desc_cols.index(self.ARRAY_LABEL) - ) - if other_item is not None: - self.check_array(irow) - - def update_other_items(self, item): - """Updates the axes information of the other items corresponding - that have the same array name as the array corresponding to the given - `item`""" - axes_col = self.desc_cols.index(self.AXES_LABEL) - if not self.prefer_list or item.column() != axes_col: - return - this_row = item.row() - arr_col = self.desc_cols.index(self.ARRAY_LABEL) - arr_item = self.item(this_row, arr_col) - if arr_item is None: - return - arr_name = arr_item.text() - self.blockSignals(True) - for row in range(self.rowCount()): - if row != this_row: - arr_item2 = self.item(row, arr_col) - if arr_item2 is not None and arr_item2.text() == arr_name: - self.item(row, axes_col).setText(item.text()) - self.blockSignals(False) - - def get_all_rows(self, row): - """Return all the rows that have the same array name as the given `row`""" - - def check_item(row): - item = self.item(row, arr_col) - return item is not None and item.text() == arr_name - - if self.plot_method is None or not self.plot_method._prefer_list: - return [row] - arr_col = self.desc_cols.index(self.ARRAY_LABEL) - arr_name = self.item(row, arr_col).text() - return [r for r in range(self.rowCount()) if check_item(r)] - - def check_array(self, row, ignore_duplicates=[]): - """check whether the array variables are valid, the array name is - valid, the axes info is valid and the dimensions""" - - def set_check(row, valid, msg): - check_item = QTableWidgetItem() - check_item.setFlags(check_item.flags() ^ Qt.ItemIsEditable) - if valid: - check_item.setIcon(QIcon(get_icon("valid.png"))) - elif valid is None: - check_item.setIcon(QIcon(get_icon("warning.png"))) - check_item.setToolTip(msg) - else: - check_item.setIcon(QIcon(get_icon("invalid.png"))) - check_item.setToolTip(msg) - self.setItem(row, check_col, check_item) - self.resizeColumnToContents(check_col) - - check_col = self.desc_cols.index(self.CHECK_LABEL) - valid = True - msg = "" - - # --------------------------------------------------------------------- - # ----------------- check if a variable is provided ------------------- - # --------------------------------------------------------------------- - - var_item = self.item(row, self.desc_cols.index(self.VARIABLE_LABEL)) - if var_item is not None and not asstring(var_item.text()).strip(): - valid = False - msg = "At least one variable name must be provided!" - - # --------------------------------------------------------------------- - # ----------------- check for duplicates of array names --------------- - # --------------------------------------------------------------------- - - arr_col = self.desc_cols.index(self.ARRAY_LABEL) - arr_item = self.item(row, arr_col) - if valid and arr_item is not None: - arr_name = arr_item.text() - if arr_name not in ignore_duplicates: - if not arr_name: - msg = "An array name must be provided" - valid = False - elif ( - len( - [ - name - for name in self.current_names - if name == arr_name - ] - ) - > 1 - ): - valid = False - msg = "Found duplicated entry of '%s'" % arr_name - - # --------------------------------------------------------------------- - # ------- check the plotmethod if necessary and set the icon ---------- - # --------------------------------------------------------------------- - - if valid and self.plot_method is not None: - rows = self.get_all_rows(row) - checks, messages = self.plot_method.check_data( - self.get_ds(), - name=list(map(self._get_variables, rows)), - dims=list(map(self._get_dims, rows)), - ) - for row2, valid, msg in zip(rows, checks, messages): - set_check(row2, valid, msg) - valid = checks[rows.index(row)] - msg = messages[rows.index(row)] - else: - set_check(row, valid, msg) - - return valid, msg - - def check_arrays(self, **kwargs): - """Convenience function to check all arrays using the - :meth:`check_array` method""" - return list( - map(partial(self.check_array, **kwargs), range(self.rowCount())) - ) - - def _str2slice(self, s): - s = s.strip() - if not s: - return [] - s = s.split(":") - if len(s) > 1: - return range(*map(int, s[:3])) - return [int(s[0])] - - def _get_dims(self, row): - start = len(self.desc_cols) - ret = {} - for dim, item in zip( - self.dims, - map( - lambda col: self.item(row, col), - range(start, self.columnCount()), - ), - ): - if item: - text = asstring(item.text()) - if text: - slices = list( - chain(*map(self._str2slice, text.split(","))) - ) - if len(slices) == 1: - slices = slices[0] - ret[dim] = slices - return ret - - def _get_variables(self, row): - var_col = self.desc_cols.index(self.VARIABLE_LABEL) - ret = [ - s.strip() - for s in asstring(self.item(row, var_col).text()).split(self.sep) - ] - ds = self.get_ds() - for i, name in enumerate(ret): - ret[i] = next(v for v in ds if asstring(v) == name) - if len(ret) == 1: - return ret[0] - return ret - - -class SubplotCreator(QWidget): - """Select a subplot to which will be created (if not already existing) when - making the plot""" - - def __init__( - self, fig=None, rows=1, cols=1, num1=1, num2=None, *args, **kwargs - ): - """ - Parameters - ---------- - fig: int or None - The number of the figure - rows: int - The number of rows for the gridspec - cols: int - The number of columns for the gridspec - num1: int - The number of the upper left corner starting from 1 - num2: int or None - The number of the lower right corner starting from 1. If None, - `num1` is used""" - super(SubplotCreator, self).__init__(*args, **kwargs) - - self.fig_label = QLabel("Figure number:", self) - if fig is None: - import matplotlib.pyplot as plt - - fig = next( - num for num in range(1, 1000) if num not in plt.get_fignums() - ) - self.fig_edit = QLineEdit(str(fig), self) - self.fig_edit.setValidator(QIntValidator()) - - self.rows_label = QLabel("No. of rows:", self) - self.rows_edit = QLineEdit(str(rows), self) - self.rows_edit.setValidator(QIntValidator(1, 9999, parent=self)) - - self.cols_label = QLabel("No. of columns:", self) - self.cols_edit = QLineEdit(str(cols), self) - self.cols_edit.setValidator(QIntValidator(1, 9999, parent=self)) - - self.num1_label = QLabel("Subplot number:", self) - self.num1_edit = QLineEdit(str(num1), self) - self.num1_edit.setValidator( - QIntValidator(1, max(1, (rows or 1) * (cols or 1)), self.num1_edit) - ) - - self.num2_label = QLabel("End of the plot", self) - self.num2_edit = QLineEdit(str(num2 or num1)) - self.num2_edit.setValidator( - QIntValidator( - num1, max(1, (rows or 1) * (cols or 1)), self.num2_edit - ) - ) - - self.table = table = QTableWidget(self) - table.setSelectionMode(QAbstractItemView.ContiguousSelection) - table.resizeRowsToContents() - table.resizeColumnsToContents() - table.setEditTriggers(QAbstractItemView.NoEditTriggers) - self.setup_table() - self.cols_edit.textChanged.connect(lambda s: self.setup_table()) - self.rows_edit.textChanged.connect(lambda s: self.setup_table()) - self.num1_edit.textChanged.connect(self.set_selected_from_num1) - self.num1_edit.textChanged.connect(self.set_num2_validator) - self.num2_edit.textChanged.connect(self.set_selected_from_num2) - table.itemSelectionChanged.connect(self.update_num_edit) - - layout = QGridLayout() - layout.addWidget(self.fig_label, 0, 0) - layout.addWidget(self.fig_edit, 0, 1) - layout.addWidget(self.rows_label, 1, 0) - layout.addWidget(self.rows_edit, 1, 1) - layout.addWidget(self.cols_label, 2, 0) - layout.addWidget(self.cols_edit, 2, 1) - layout.addWidget(self.num1_label, 3, 0) - layout.addWidget(self.num1_edit, 3, 1) - layout.addWidget(self.num2_label, 4, 0) - layout.addWidget(self.num2_edit, 4, 1) - - layout.addWidget(self.table, 1, 2, 4, 4) - - self.setLayout(layout) - - @staticmethod - def create_subplot(fig=None, rows=1, cols=1, num1=1, num2=None, **kwargs): - """Create a subplot for the given figure - - Parameters - ---------- - fig: :class:`matplotlib.figure.Figure` or int - If integer, the :func:`matplotlib.pyplot.figure` function is used - rows: int - Number of rows for the gridspec - cols: int - Number of columns for the gridspec - num1: int - The subplot number of the upper left corner in the grid (starting - from 1!) - num2: None or int - The subplot number of the lower left corner in the grid (starting - from 1!). If None, `num1` will be used - ``**kwargs`` - Any other keyword argument for the - :meth:`matplotlib.figure.Figure.add_subplot` method - - Returns - ------- - mpl.axes.Subplot - The new created subplot""" - if not isinstance(fig, mpl.figure.Figure): - import matplotlib.pyplot as plt - - fig = plt.figure( - fig - or next( - num - for num in range(1, 1000) - if num not in plt.get_fignums() - ) - ) - if num1 == num2: - num2 = None - elif num2 is not None: - num2 = num2 - 1 - num1 = num1 - 1 - # first check if an axes with this specification already exists and if - # yes, return it - for ax in fig.axes: - ss = ax.get_subplotspec() - if ss.num1 == num1 and ( - ss.num2 == num2 - or (ss.num2 is None and num1 == num2) - or (num2 is None and ss.num2 == num1) - ): - gs = ss.get_gridspec() - if gs.get_geometry() == (rows, cols): - return ax - # if it does not exist, create a new one - gs = mpl.gridspec.GridSpec(rows, cols) - ss = mpl.gridspec.SubplotSpec(gs, num1, num2) - return fig.add_subplot(ss, **kwargs) - - def setup_table(self): - """Set up the table based upon the number of rows and columns in the - rows and cols line edit""" - rows = int(self.rows_edit.text() or 0) - cols = int(self.cols_edit.text() or 0) - if not rows or not cols: - return - self.table.clear() - self.table.setRowCount(rows) - self.table.setColumnCount(cols) - selected = int(self.num1_edit.text() or 0) - if selected: - selected = ( - int(floor(selected / (cols + 1))), - ((selected % cols) - 1) % cols, - ) - else: - selected = (0, 0) - for i, (row, col) in enumerate(product(range(rows), range(cols)), 1): - item = QTableWidgetItem(str(i)) - self.table.setItem(row, col, item) - self.table.resizeColumnsToContents() - self.table.resizeRowsToContents() - self.num1_edit.validator().setTop(max(1, rows * cols)) - self.set_num2_validator(self.num1_edit.text()) - self.set_selected_from_num1(self.num1_edit.text()) - - def set_num2_validator(self, s): - """Set the validator range for the num2 line edit""" - num1 = int(s or 1) - rows = int(self.rows_edit.text() or 0) - cols = int(self.cols_edit.text() or 0) - num2 = int(self.num2_edit.text() or num1) - self.num2_edit.setText(str(max(num1, num2))) - self.num2_edit.validator().setRange( - num1, max(1, (rows or 1) * (cols or 1)) - ) - - def set_selected_from_num1(self, s): - """Update the selection of the table after changes of - :attr:`num1_edit`""" - self.table.clearSelection() - if not s: - return - num1 = int(s) - num2 = int(self.num2_edit.text() or num1) - self.set_selected(num1, num2) - - def set_selected_from_num2(self, s): - """Update the selection of the table after changes of :attr:`num2_edit`""" - self.table.clearSelection() - if not s: - return - num2 = int(s) - num1 = int(self.num1_edit.text() or 0) - if not num1: - return - self.set_selected(num1, num2) - - def set_selected(self, num1, num2): - """Update the selection in the table based upon `num1` and `num2`""" - self.table.clearSelection() - rows = int(self.rows_edit.text() or 0) - cols = int(self.cols_edit.text() or 0) - if not rows or not cols: - return - sel_rows = range( - int(floor(num1 / (cols + 1))), int(floor(num2 / (cols + 1))) + 1 - ) - sel_cols = range( - ((num1 % cols) - 1) % cols, (((num2 % cols) - 1) % cols) + 1 - ) - for item in starmap(self.table.item, product(sel_rows, sel_cols)): - if item: - self.table.blockSignals(True) - item.setSelected(True) - self.table.blockSignals(False) - - def update_num_edit(self): - """Update the :attr:`num1_edit` and :attr:`num2_edit` after the - selection of the table changed""" - items = self.table.selectedItems() - if not items: - return - sel_rows = [item.row() for item in items] - sel_cols = [item.column() for item in items] - cols = int(self.cols_edit.text() or 0) - self.num1_edit.blockSignals(True) - self.num1_edit.setText(str(min(sel_rows) * cols + min(sel_cols) + 1)) - self.num1_edit.blockSignals(False) - self.num2_edit.blockSignals(True) - self.num2_edit.setText(str(max(sel_rows) * cols + max(sel_cols) + 1)) - self.num2_edit.blockSignals(False) - - def get_iter(self): - """Get the iterator over the axes""" - fig_text = self.fig_edit.text() - if fig_text: - figs = repeat(fig_text) - else: - import matplotlib.pyplot as plt - - figs = map( - str, - ( - num - for num in range(1, 1000) - if num not in plt.get_fignums() - ), - ) - num1 = self.num1_edit.text() or "1" - num2 = self.num2_edit.text() or num1 - return ( - "(%s, %s, %s, %s, %s)" - % ( - fig, - self.rows_edit.text() or "1", - self.cols_edit.text() or "1", - num1, - num2, - ) - for fig in figs - ) - - -class AxesViewer(QGraphicsView): - """Widget to show a rectangle""" - - sizeChanged = QtCore.pyqtSignal(QtCore.QSize) - - def __init__(self, *args, **kwargs): - super(AxesViewer, self).__init__(*args, **kwargs) - self.setHorizontalScrollBarPolicy(Qt.ScrollBarAlwaysOff) - self.setVerticalScrollBarPolicy(Qt.ScrollBarAlwaysOff) - - def resizeEvent(self, *args, **kwargs): - super(AxesViewer, self).resizeEvent(*args, **kwargs) - self.setSceneRect( - 0, 0, self.frameSize().width(), self.frameSize().height() - ) - self.sizeChanged.emit(self.size()) - - -class AxesCreator(QWidget): - """Widget to setup an axes in a arbitrary location""" - - def __init__( - self, fig=None, x0=0.125, y0=0.1, x1=0.9, y1=0.9, *args, **kwargs - ): - """ - Parameters - ---------- - fig: int or None - The figure number. If None, a new figure number will be used - x0: float - the x-coordinate of the lower left corner (between 0 and 1) - y0: float - the y-coordinate of the lower left corner (between 0 and 1) - x1: float - the x-coordinate of the upper right corner (between 0 and 1) - y1: float - the y-coordinate of the upper right corner (between 0 and 1) - """ - super(AxesCreator, self).__init__(*args, **kwargs) - self.fig_label = QLabel("Figure number:", self) - if fig is None: - import matplotlib.pyplot as plt - - fig = next( - num for num in range(1, 1000) if num not in plt.get_fignums() - ) - self.fig_edit = QLineEdit(str(fig), self) - self.fig_edit.setValidator(QIntValidator()) - - self.x0_label = QLabel("Lower left x: ", self) - self.x0_edit = QLineEdit(str(x0), self) - self.x0_edit.setValidator(QDoubleValidator(0.0, 1.0, 5, parent=self)) - - self.y0_label = QLabel("Lower left y: ", self) - self.y0_edit = QLineEdit(str(y0), self) - self.y0_edit.setValidator(QDoubleValidator(0.0, 1.0, 5, parent=self)) - - self.x1_label = QLabel("Upper right x: ", self) - self.x1_edit = QLineEdit(str(x1), self) - self.x1_edit.setValidator(QDoubleValidator(0.0, 1.0, 5, parent=self)) - - self.y1_label = QLabel("Upper right y: ", self) - self.y1_edit = QLineEdit(str(y1), self) - self.y1_edit.setValidator(QDoubleValidator(0.5, 1.0, 5, parent=self)) - - self.graphics_scene = QGraphicsScene(self) - self.graphics_view = AxesViewer(self.graphics_scene) - - size = self.graphics_view.size() - width = size.width() * float(x1 - x0) - height = size.height() * float(y1 - y0) - x0_resized = size.width() * float(x0) - y0_resized = size.height() * float(y0) - - self.box_widget = QGraphicsRectItem( - x0_resized, y0_resized, width, height - ) - self.graphics_scene.addItem(self.box_widget) - self.graphics_view.sizeChanged.connect(self.resize_rectangle) - - layout = QGridLayout() - layout.addWidget(self.fig_label, 0, 0) - layout.addWidget(self.fig_edit, 0, 1) - layout.addWidget(self.x0_label, 1, 0) - layout.addWidget(self.x0_edit, 1, 1) - layout.addWidget(self.y0_label, 2, 0) - layout.addWidget(self.y0_edit, 2, 1) - layout.addWidget(self.x1_label, 3, 0) - layout.addWidget(self.x1_edit, 3, 1) - layout.addWidget(self.y1_label, 4, 0) - layout.addWidget(self.y1_edit, 4, 1) - - layout.addWidget(self.graphics_view, 1, 2, 4, 4) - - for w in [self.x0_edit, self.y0_edit, self.x1_edit, self.y1_edit]: - w.textChanged.connect( - lambda s: self.resize_rectangle(self.graphics_view.size()) - ) - - self.setLayout(layout) - - def resize_rectangle(self, size): - """resize the rectangle after changes of the widget size""" - coords = [ - self.x0_edit.text(), - self.y0_edit.text(), - self.x1_edit.text(), - self.y1_edit.text(), - ] - if any(not c for c in coords): - return - x0, y0, x1, y1 = map(float, coords) - width = size.width() * float(x1 - x0) - height = size.height() * float(y1 - y0) - x0_resized = size.width() * float(x0) - y1_resized = size.height() * float(1.0 - y1) - self.box_widget.setRect(x0_resized, y1_resized, width, height) - - @staticmethod - def create_axes(fig, x0, y0, x1, y1, **kwargs): - """ - Create an axes for the given `fig` - - Parameters - ---------- - fig: int or None - The figure number. If None, a new figure number will be used - x0: float - the x-coordinate of the lower left corner (between 0 and 1) - y0: float - the y-coordinate of the lower left corner (between 0 and 1) - x1: float - the x-coordinate of the upper right corner (between 0 and 1) - y1: float - the y-coordinate of the upper right corner (between 0 and 1) - ``**kwargs`` - Any other keyword argument for the - :meth:`matplotlib.figure.Figure.add_axes` method - """ - if not isinstance(fig, mpl.figure.Figure): - import matplotlib.pyplot as plt - - fig = plt.figure( - fig - or next( - num - for num in range(1, 1000) - if num not in plt.get_fignums() - ) - ) - x1 = max([x0, x1]) - y1 = max([y0, y1]) - bbox = mpl.transforms.Bbox.from_extents(x0, y0, x1, y1) - points = np.round(bbox.get_points(), 5) - for ax in fig.axes: - if (np.round(ax.get_position().get_points(), 5) == points).all(): - return ax - return fig.add_axes(bbox, **kwargs) - - def get_iter(self): - """Get the iterator over the axes""" - fig_text = self.fig_edit.text() - if fig_text: - figs = repeat(fig_text) - else: - import matplotlib.pyplot as plt - - figs = map( - str, - ( - num - for num in range(1, 1000) - if num not in plt.get_fignums() - ), - ) - left = self.x0_edit.text() or "0.125" - bottom = self.y0_edit.text() or "0.1" - width = self.x1_edit.text() or "0.9" - height = self.y1_edit.text() or "0.9" - return ( - "(%s, %s, %s, %s, %s)" % (fig, left, bottom, width, height) - for fig in figs - ) - - -class AxesSelector(QWidget): - """Widget to select an already created axes - - Click the button, select your axes and click the button again""" - - def __init__(self, *args, **kwargs): - super(AxesSelector, self).__init__(*args, **kwargs) - self.bt_choose = QPushButton("Click to select axes", self) - self.bt_choose.setCheckable(True) - self.msg_label = QLabel("", self) - - self.result_label = QLabel("", self) - - self.layout = QVBoxLayout() - self.layout.addWidget(self.bt_choose) - self.layout.addWidget(self.msg_label) - self.layout.addWidget(self.result_label) - - self.setLayout(self.layout) - - self.bt_choose.clicked.connect(self.change_pickers) - - def change_pickers(self, b): - """Change the pickers of the axes instances - - If the push button is clicked, we replace the existing pickers of the - axes in order to select the plots. Otherwise we restore them""" - if self.bt_choose.isChecked(): - self.bt_choose.setText("Click when finished") - self.msg_label.setText("Select an existing axes") - self.result_label.setText("") - self.allow_axes_select() - else: - self.bt_choose.setText("Select an axes") - self.msg_label.setText("") - self.restore_pickers() - - def unclick(self): - """Restore the original pickers""" - if self.bt_choose.isChecked(): - self.bt_choose.click() - - def allow_axes_select(self): - """Replace make all axes pickable""" - import matplotlib.pyplot as plt - - self.fig_events = d = {} - self.pickers = pickers = defaultdict(dict) - for num in plt.get_fignums(): - fig = plt.figure(num) - d[num] = fig.canvas.mpl_connect("pick_event", self.get_picked_ax) - for ax in fig.axes: - pickers[num][ax] = ax.get_picker() - ax.set_picker(True) - - def restore_pickers(self): - """Restore the original pickers of the existing axes instances""" - import matplotlib.pyplot as plt - - for num, cid in self.fig_events.items(): - plt.figure(num).canvas.mpl_disconnect(cid) - for artist, picker in self.pickers[num].items(): - artist.set_picker(picker) - self.fig_events.clear() - self.pickers.clear() - - def get_picked_ax(self, event): - """Function to be called when an axes is picked""" - try: - ax = event.artist.axes - except AttributeError: - ax = event.artist.get_axes() - text = self.result_label.text() - if text: - text += ";;" - self.result_label.setText(text + self.inspect_axes(ax)) - - def inspect_axes(self, ax): - """Inspect the given axes and get the right string for making a plot - with it""" - from matplotlib.axes import SubplotBase - - if isinstance(ax, SubplotBase): - ss = ax.get_subplotspec() - gs = ss.get_gridspec() - rows, cols = gs.get_geometry() - return "(%i, %i, %i, %i, %i)" % ( - ax.get_figure().number, - rows, - cols, - ss.num1 + 1, - (ss.num2 or ss.num1) + 1, - ) - else: - box = ax.get_position() - points = np.round(box.get_points().ravel(), 5).tolist() - return "(%i, %1.5f, %1.5f, %1.5f, %1.5f)" % tuple( - [ax.get_figure().number] + points - ) - - def setVisible(self, b): - """Reimplemented to restore the pickers if the widget is made invisible""" - super(AxesSelector, self).setVisible(b) - if not self.isVisible(): - self.unclick() - - def close(self): - """Reimplemented to restore the pickers if the widget is closed""" - self.unclick() - return super(AxesSelector, self).close() - - def get_iter(self): - """Get the iterator over the axes""" - return (txt for txt in cycle(self.result_label.text().split(";;"))) - - -class AxesCreatorCollection(QDialog): - """Wrapper for a QToolBox that holds the different possibilities to select - an axes - - When the user finished, the :attr:`okpressed` symbol is emitted with an - infinite iterator of strings. Possible widgets for the toolbox are - determined by the :attr:`widgets` attribute""" - - #: signal that is emitted when the 'Ok' pushbutton is pressed and the user - #: finished the selection - okpressed = QtCore.pyqtSignal(types.GeneratorType) - - #: key, title and class fot the widget that is used to create an - #: axes - widgets = [ - ("subplot", "Subplot in a grid", SubplotCreator), - ("axes", "Arbitray position", AxesCreator), - ("choose", "Existing subplot", AxesSelector), - ] - - def __init__(self, key=None, func_kwargs={}, *args, **kwargs): - """ - Parameters - ---------- - key: str or None - if string, it must be one of the keys in the :attr:`widgets` - attribute - func_kwargs: dict - a dictionary that is passed to the class constructor determined by - the `key` parameter if `key` is not None - ``*args,**kwargs`` - Determined by the QWidget class""" - super(AxesCreatorCollection, self).__init__(*args, **kwargs) - self.bt_cancel = QPushButton("Cancel", self) - self.bt_ok = QPushButton("Ok", self) - - self.tb = QTabWidget(self) - self.tb.setTabPosition(QTabWidget.West) - current = 0 - for i, (func_name, title, cls) in enumerate(self.widgets): - if func_name == key: - current = i - w = cls(**func_kwargs) - else: - w = cls() - self.tb.addTab(w, title) - - self.tb.setCurrentIndex(current) - - self.bt_ok.clicked.connect(self.create_subplot) - self.bt_ok.clicked.connect(self.close) - self.bt_cancel.clicked.connect(self.close) - - layout = QVBoxLayout() - layout.addWidget(self.tb) - - hbox = QHBoxLayout() - hbox.addStretch(0) - hbox.addWidget(self.bt_cancel) - hbox.addWidget(self.bt_ok) - layout.addLayout(hbox) - - self.setLayout(layout) - - def create_subplot(self): - """Method that is called whenn the ok button is pressed. - - It emits the :attr:`okpressed` signal with the iterator of the current - widget in the toolbox""" - it = self.tb.currentWidget().get_iter() - self.okpressed.emit(it) - - def close(self): - """reimplemented to make sure that all widgets are closed when this one - is closed""" - for w in map(self.tb.widget, range(len(self.widgets))): - w.close() - return super(AxesCreatorCollection, self).close() - - -class PlotCreator(QDialog): - """ - Widget to extract data from a dataset and eventually create a plot""" - - #: Tooltip for not making a plot - NO_PM_TT = "Choose a plot method (or choose none to only extract the data)" - - _preset = None - - _decoder = None - - def __init__(self, *args, **kwargs): - self.help_explorer = kwargs.pop("help_explorer", None) - super(PlotCreator, self).__init__(*args, **kwargs) - self.setAttribute(Qt.WA_DeleteOnClose) - self.setWindowTitle("Create plots") - self.error_msg = PyErrorMessage(self) - mp = psy.gcp(True) - - self.splitter = splitter = QSplitter(Qt.Vertical, parent=self) - self.w = w = QWidget(self) - self.fmt_tree_widget = QWidget(self) - - # --------------------------------------------------------------------- - # -------------------------- children --------------------------------- - # --------------------------------------------------------------------- - - self.ds_combo = QComboBox(parent=w) - self.ds_combo.setToolTip("The data source to use the data from") - self.fill_ds_combo(mp) - self.bt_open_file = QToolButton(parent=w) - self.bt_open_file.setIcon(QIcon(get_icon("run_arrow.png"))) - self.bt_open_file.setToolTip("Open a new dataset from the hard disk") - self.bt_get_ds = LoadFromConsoleButton(xarray.Dataset, parent=w) - self.bt_get_ds.setToolTip( - "Use a dataset already defined in the console" - ) - - self.pm_label = QLabel("Plot method: ", w) - self.pm_combo = QComboBox(w) - self.fill_plot_method_combo() - self.bt_load_preset = QPushButton("Preset") - self.bt_load_preset.setEnabled(False) - self.pm_info = QToolButton(w) - self.pm_info.setIcon(QIcon(get_icon("info.png"))) - self.pm_info.setToolTip("Show information in the help explorer") - - self.variables_table = VariablesTable(self.get_ds, parent=w) - self.variables_table.fill_from_ds() - - self.coords_table = CoordsTable(self.get_ds, parent=w) - self.coords_table.fill_from_ds() - - self.array_table = ArrayTable(self.get_ds, parent=w) - self.array_table.setup_from_ds(plot_method=self.pm_combo.currentText()) - - self.cbox_load = QCheckBox("load") - self.cbox_load.setToolTip( - "Load the selected data arrays into memory when clicking on " - "Ok. Note that this might cause problems for large " - "arrays!" - ) - - self.cbox_close_popups = QCheckBox("close dropdowns", w) - self.cbox_close_popups.setChecked(True) - self.cbox_close_popups.setToolTip( - "Close drop down menues after selecting indices to plot" - ) - self.cbox_use_coords = QCheckBox("show coordinates", w) - self.cbox_use_coords.setChecked(False) - self.cbox_use_coords.setToolTip( - "Show the real coordinates instead of the indices in the drop " - "down menues" - ) - self.bt_remove_all = QToolButton(w) - self.bt_remove_all.setIcon(QIcon(get_icon("minusminus.png"))) - self.bt_remove_all.setToolTip("Remove all arrays") - self.bt_remove = QToolButton(w) - self.bt_remove.setIcon(QIcon(get_icon("minus.png"))) - self.bt_remove.setToolTip("Remove selected arrays") - self.bt_add = QToolButton(w) - self.bt_add.setIcon(QIcon(get_icon("plus.png"))) - self.bt_add.setToolTip("Add arrays for the selected variables") - self.bt_add_all = QToolButton(w) - self.bt_add_all.setIcon(QIcon(get_icon("plusplus.png"))) - self.bt_add_all.setToolTip( - "Add arrays for all variables in the dataset" - ) - - self.rows_axis_label = QLabel("No. of rows", w) - self.rows_axis_edit = QLineEdit(w) - self.rows_axis_edit.setText("1") - self.cols_axis_label = QLabel("No. sof columns", w) - self.cols_axis_edit = QLineEdit(w) - self.cols_axis_edit.setText("1") - self.max_axis_label = QLabel("No. of axes per figure", w) - self.max_axis_edit = QLineEdit(w) - self.bt_add_axes = QPushButton("Add new subplots", w) - self.bt_add_axes.setToolTip( - "Adds subplots for the selected arrays based the specified number " - "of rows and columns" - ) - - self.row_axis_label = QLabel("Row number:", w) - self.row_axis_edit = QLineEdit(w) - self.row_axis_edit.setText("1") - self.col_axis_label = QLabel("Column number", w) - self.col_axis_edit = QLineEdit(w) - self.col_axis_edit.setText("1") - self.bt_add_single_axes = QPushButton("Add one subplot", w) - self.bt_add_single_axes.setToolTip( - "Add one subplot for the specified row and column" - ) - - self.fmt_tree_label = QLabel( - "Modify the formatoptions of the newly created plots." - "Values must be entered in yaml syntax", - parent=self.fmt_tree_widget, - ) - - self.fmt_tree = RcParamsTree( - None, None, None, parent=self.fmt_tree_widget - ) - self.fmt_tree.value_col = 3 - self.fmt_tree.setColumnCount(4) - self.fmt_tree.setHeaderLabels(["Formatoption", "", "", "Value"]) - - # --------------------------------------------------------------------- - # ---------------------------- connections ---------------------------- - # --------------------------------------------------------------------- - - # ----------------- dataset combo connections ------------------------ - self.bt_open_file.clicked.connect(lambda: self.open_dataset()) - self.bt_get_ds.object_loaded.connect(self.add_new_ds) - self.ds_combo.currentIndexChanged[int].connect(self.set_ds) - - self.ds_combo.currentIndexChanged[int].connect( - lambda i: self.variables_table.fill_from_ds() - ) - self.ds_combo.currentIndexChanged[int].connect( - lambda i: self.coords_table.fill_from_ds() - ) - self.ds_combo.currentIndexChanged[int].connect( - lambda i: self.array_table.setup_from_ds() - ) - self.ds_combo.currentIndexChanged[int].connect( - lambda i: self.connect_combo_boxes() - ) - - # ------------------- plot method connections ------------------------- - self.pm_combo.currentIndexChanged[str].connect( - lambda s: ( - self.pm_combo.setToolTip(getattr(psy.plot, s)._summary) - if s - else self.NO_PM_TT - ) - ) - self.pm_info.clicked.connect(self.show_pm_info) - self.pm_combo.currentIndexChanged[str].connect(self.array_table.set_pm) - self.pm_combo.currentIndexChanged[str].connect(self.fill_fmt_tree) - - # ------------------- preset button connections ----------------------- - self.bt_load_preset.clicked.connect(self.load_preset) - - # --------------------- Combo box connections ------------------------- - self.cbox_close_popups.clicked.connect(self.toggle_close_popups) - self.cbox_use_coords.clicked.connect(self.reset_comboboxes) - # connect leftclick of combo boxes to create new arrays or update the - # selected - self.connect_combo_boxes() - - # ----------------- add and remove button connections ----------------- - self.bt_add.clicked.connect( - lambda b: self.insert_array( - variables=self.variables_table.selected_variables - ) - ) - self.bt_add_all.clicked.connect( - lambda b: self.insert_array( - variables=self.variables_table.variables - ) - ) - self.bt_remove_all.clicked.connect( - lambda b: self.array_table.remove_arrays(False) - ) - self.bt_remove.clicked.connect( - lambda b: self.array_table.remove_arrays(True) - ) - - # ------------- axes creation connections ----------------------------- - self.rows_axis_edit.returnPressed.connect(self.bt_add_axes.click) - self.cols_axis_edit.returnPressed.connect(self.bt_add_axes.click) - self.max_axis_edit.returnPressed.connect(self.bt_add_axes.click) - self.bt_add_axes.clicked.connect(self.setup_subplots) - self.row_axis_edit.returnPressed.connect(self.bt_add_single_axes.click) - self.col_axis_edit.returnPressed.connect(self.bt_add_single_axes.click) - self.bt_add_single_axes.clicked.connect(self.setup_subplot) - - # -------------------- create and cancel connections ------------------ - self.bbox = bbox = QDialogButtonBox( - QDialogButtonBox.Ok | QDialogButtonBox.Cancel - ) - bbox.accepted.connect(self.create_plots) - bbox.rejected.connect(self.reject) - - # -------------------- other connections ------------------------------ - # allow only to select either variables or newly created arrays in - # order to control the behaviour of the combo box left click in - # self.insert_array_from_combo - self.array_table.itemSelectionChanged.connect( - self.variables_table.clearSelection - ) - self.variables_table.itemSelectionChanged.connect( - self.array_table.clearSelection - ) - - # --------------------------------------------------------------------- - # ---------------------------- layouts -------------------------------- - # --------------------------------------------------------------------- - - self.ds_box = QHBoxLayout() - self.ds_box.addWidget(self.ds_combo) - self.ds_box.addWidget(self.bt_open_file) - self.ds_box.addWidget(self.bt_get_ds) - - self.pm_box = QHBoxLayout() - self.pm_box.addStretch(0) - self.pm_box.addWidget(self.pm_label) - self.pm_box.addWidget(self.pm_combo) - self.pm_box.addWidget(self.bt_load_preset) - self.pm_box.addWidget(self.pm_info) - - self.tree_box = QHBoxLayout() - self.tree_box.addStretch(0) - self.tree_box.addWidget(self.cbox_load) - self.tree_box.addWidget(self.cbox_close_popups) - self.tree_box.addWidget(self.cbox_use_coords) - self.tree_box.addWidget(self.bt_remove_all) - self.tree_box.addWidget(self.bt_remove) - self.tree_box.addWidget(self.bt_add) - self.tree_box.addWidget(self.bt_add_all) - - self.axes_box = QGridLayout() - self.axes_box.addWidget(self.max_axis_label, 0, 0) - self.axes_box.addWidget(self.max_axis_edit, 0, 1) - self.axes_box.addWidget(self.rows_axis_label, 0, 2) - self.axes_box.addWidget(self.rows_axis_edit, 0, 3) - self.axes_box.addWidget(self.cols_axis_label, 0, 4) - self.axes_box.addWidget(self.cols_axis_edit, 0, 5) - self.axes_box.addWidget(self.bt_add_axes, 0, 6) - self.axes_box.addWidget(self.row_axis_label, 1, 2) - self.axes_box.addWidget(self.row_axis_edit, 1, 3) - self.axes_box.addWidget(self.col_axis_label, 1, 4) - self.axes_box.addWidget(self.col_axis_edit, 1, 5) - self.axes_box.addWidget(self.bt_add_single_axes, 1, 6) - - self.vbox = QVBoxLayout() - self.vbox.addLayout(self.ds_box) - self.vbox.addLayout(self.pm_box) - self.vbox.addLayout(self.tree_box) - self.vbox.addWidget(self.variables_table) - self.vbox.addWidget(self.coords_table) - self.vbox.addWidget(self.array_table) - self.vbox.addLayout(self.axes_box) - self.vbox.addWidget(self.bbox) - - w.setLayout(self.vbox) - - fmt_tree_layout = QVBoxLayout() - fmt_tree_layout.addWidget(self.fmt_tree_label) - fmt_tree_layout.addWidget(self.fmt_tree) - self.fmt_tree_widget.setLayout(fmt_tree_layout) - - splitter.addWidget(w) - - splitter.addWidget(self.fmt_tree_widget) - - hbox = QHBoxLayout(self) - hbox.addWidget(splitter) - self.setLayout(hbox) - self.fill_fmt_tree(self.pm_combo.currentText()) - - def toggle_close_popups(self): - """Change the automatic closing of popups""" - close_popups = self.cbox_close_popups.isChecked() - for cb in self.coords_table.combo_boxes: - cb.close_popups = close_popups - - def reset_comboboxes(self): - """Clear all comboboxes""" - use_coords = self.cbox_use_coords.isChecked() - for cb in self.coords_table.combo_boxes: - cb.use_coords = use_coords - cb.clear() - cb._is_empty = True - - def fill_fmt_tree(self, pm): - import psyplot.project as psy - - self.fmt_tree.clear() - if not pm: - self.fmt_tree_widget.setVisible(False) - self.bt_load_preset.setEnabled(False) - else: - pm = getattr(psy.plot, pm) - plotter = pm.plotter_cls() - if self._preset: - plotter.update( - psy.Project.extract_fmts_from_preset(self._preset, pm) - ) - self.fmt_tree.rc = plotter - self.fmt_tree.validators = { - key: getattr(plotter, key).validate for key in plotter - } - self.fmt_tree.descriptions = { - key: getattr(plotter, key).name for key in plotter - } - self.fmt_tree.initialize() - icon = QIcon(get_icon("info.png")) - docs_funcs = { - key: partial(plotter.show_docs, key) for key in plotter - } - for item in self.fmt_tree.top_level_items: - key = item.text(0) - bt = QToolButton() - bt.setIcon(icon) - bt.clicked.connect(docs_funcs[key]) - self.fmt_tree.setItemWidget(item, 2, bt) - self.fmt_tree.resizeColumnToContents(2) - self.fmt_tree_widget.setVisible(True) - self.bt_load_preset.setEnabled(True) - - def setup_subplots(self): - """Method to be emitted to setup the subplots for the selected arrays - on new figures""" - rows = int(self.rows_axis_edit.text()) - cols = int(self.cols_axis_edit.text()) - maxn = int(self.max_axis_edit.text() or 0) - self.array_table.add_subplots(rows, cols, maxn) - - def setup_subplot(self): - """Method to be emitted to setup one subplot at a specific location - for each of the selected arrays on separate (new) figures""" - rows = int(self.rows_axis_edit.text()) - cols = int(self.cols_axis_edit.text()) - row = int(self.row_axis_edit.text()) - col = int(self.col_axis_edit.text()) - self.array_table.add_single_subplot(rows, cols, row, col) - - def show_pm_info(self): - """Shows info on the current plotting method in the help explorer""" - if self.help_explorer is None: - return - pm_name = self.pm_combo.currentText() - if pm_name: - self.help_explorer.show_help( - getattr(psy.plot, pm_name), "psyplot.project.plot." + pm_name - ) - else: - self.help_explorer.show_rst( - """ - No plot - ======= - No plot will be created, only the data is extracted""", - "no_plot", - ) - - def connect_combo_boxes(self): - for cb in self.coords_table.combo_boxes: - cb.leftclick.connect(self.insert_array_from_combo) - - def fill_plot_method_combo(self): - """Takes the names of the plotting methods in the current project""" - self.pm_combo.addItems([""] + sorted(psy.plot._plot_methods)) - self.pm_combo.setToolTip(self.NO_PM_TT) - - def set_pm(self, plot_method): - self.pm_combo.setCurrentIndex( - self.pm_combo.findText(plot_method or "") - ) - - def create_plots(self): - """Method to be called when the `Create plot` button is pressed - - This method reads the data from the :attr:`array_table` attribute and - makes the plot (or extracts the data) based upon the - :attr:`plot_method` attribute""" - import matplotlib.pyplot as plt - - names = self.array_table.arr_names_dict - pm = self.pm_combo.currentText() - if pm: - pm = getattr(psy.plot, pm) - for d, (default_dim, default_slice) in product( - six.itervalues(names), six.iteritems(pm._default_dims) - ): - d.setdefault(default_dim, default_slice) - kwargs = { - "ax": self.array_table.axes, - "fmt": {t[1]: t[2] for t in self.fmt_tree._get_rc()}, - } - else: - pm = self.open_data - kwargs = {} - fig_nums = plt.get_fignums()[:] - try: - pm( - self.ds, - arr_names=names, - load=self.cbox_load.isChecked(), - decoder=self._decoder, - **kwargs, - ) - except Exception: - for num in set(plt.get_fignums()).difference(fig_nums): - plt.close(num) - self.error_msg.showTraceback("Failed to create the plots!") - logger.debug( - "Error while creating the plots with %s!", names, exc_info=True - ) - else: - self.close() - - def load_preset(self): - """Load a preset file""" - fname, ok = QFileDialog.getOpenFileName( - self, - "Load preset", - os.path.join(get_configdir(), "presets"), - "YAML files (*.yml *.yaml);;" "All files (*)", - ) - if ok: - self.set_preset(fname) - - def open_dataset(self, fnames=None, *args, **kwargs): - """Opens a file dialog and the dataset that has been inserted""" - - def open_ds(): - if len(fnames) == 1: - kwargs.pop("concat_dim", None) - return psy.open_dataset(fnames[0], *args, **kwargs) - else: - return psy.open_mfdataset(fnames, *args, **kwargs) - - if fnames is None: - fnames = QFileDialog.getOpenFileNames( - self, - "Open dataset", - os.getcwd(), - "NetCDF files (*.nc *.nc4);;" - "Shape files (*.shp);;" - "All files (*)", - ) - if with_qt5: # the filter is passed as well - fnames = fnames[0] - if isinstance(fnames, xarray.Dataset): - ds = fnames - self.add_new_ds("ds", ds) - elif not fnames: - return - else: - try: - ds = open_ds() - except Exception: - kwargs["decode_times"] = False - try: - ds = open_ds() - except Exception: - self.error_msg.showTraceback( - "Could not open dataset %s" % (fnames,) - ) - return - fnames_str = ", ".join(fnames) - self.add_new_ds(fnames_str, ds, fnames_str) - - def set_preset(self, preset): - import psyplot.project as psy - - self._preset = psy.Project._load_preset(preset) - if self.fmt_tree_widget.isVisible(): - self.fill_fmt_tree(self.pm_combo.currentText()) - - def set_decoder(self, decoder): - """Set the decoder for the new plots.""" - self._decoder = decoder - - def add_new_ds(self, oname, ds, fname=None): - d = {"ds": ds} - if fname: - d["fname"] = fname - self.ds_descs.insert(0, d) - self.ds_combo.insertItem(0, "New: " + oname) - self.ds_combo.setCurrentIndex(0) - - def set_ds(self, i): - """Set the current dataset""" - self.ds = self.ds_descs[i]["ds"] - - def fill_ds_combo(self, project): - """fill the dataset combobox with datasets of the current main project""" - self.ds_combo.clear() - self.ds_combo.setInsertPolicy(QComboBox.InsertAtBottom) - ds_descs = project._get_ds_descriptions( - project.array_info(ds_description="all") - ) - self.ds_combo.addItems( - [ - "%i: %s" % (i, ds_desc["fname"]) - for i, ds_desc in six.iteritems(ds_descs) - ] - ) - self.ds_descs = list(ds_descs.values()) - if len(self.ds_descs): - self.set_ds(0) - - def insert_array_from_combo(self, cb, variables=None): - """Insert new arrays into the dataset when the combobox is left-clicked""" - if variables is None: - variables = self.variables_table.selected_variables - dims = {} - for other_cb in self.coords_table.combo_boxes: - ind = other_cb.currentIndex() - dims[other_cb.dim] = str((ind - 1) if ind not in [-1, 0] else "") - dim = cb.dim - inserts = list( - str(ind.row() - 1) - for ind in cb.view().selectionModel().selectedIndexes() - if ind.row() > 0 - ) - dims.pop(dim) - for name, val in product(variables, inserts): - dims[dim] = val - self.array_table.insert_array(name, check=False, **dims) - if len(inserts) > 1: - inserts = "%s:%s" % (min(inserts), max(inserts)) - elif inserts: - inserts = inserts[0] - else: - return - self.array_table.update_selected(check=False, dims={dim: inserts}) - self.array_table.check_arrays() - - def insert_array(self, variables=None): - """Inserts an array for the given variables (or the ones selected in - the :attr:`variable_table` if `variables` is None) - """ - if variables is None: - variables = self.variables_table.selected_variables - dims = {} - for other_cb in self.coords_table.combo_boxes: - ind = other_cb.currentIndex() - dims[other_cb.dim] = str((ind - 1) if ind not in [-1, 0] else "") - for name in variables: - self.array_table.insert_array(name, check=False, **dims) - self.array_table.check_arrays() - - def get_ds(self, i=None): - """Get the dataset - - Parameters - ---------- - i: int or None - If None, the dataset of the current index in the `ds_combo` is - returned. Otherwise it specifies the locdation of the dictionary in - the :attr:`ds_descs` attribute - - Returns - ------- - xarray.Dataset - The requested dataset""" - if i is None: - i = self.ds_combo.currentIndex() - if not len(self.ds_descs): - return - return self.ds_descs[i]["ds"] - - def close(self, *args, **kwargs): - """Reimplemented to make sure that the data sets are deleted""" - super(PlotCreator, self).close(*args, **kwargs) - if hasattr(self, "ds_descs"): - del self.ds_descs - - def open_data(self, *args, **kwargs): - """Convenience method to create a sub project without a plotter - - This method is used when the :attr:`pm_combo` is empty""" - p = psy.Project.from_dataset(*args, main=psy.gcp(True), **kwargs) - psy.scp(p) - - def switch2ds(self, ds): - """Switch to the given dataset - - Parameters - ---------- - ds: xarray.Dataset - The dataset to use. It is assumed that this dataset is already - in the dataset combobox""" - for i, desc in enumerate(self.ds_descs): - if desc["ds"] is ds: - self.ds_combo.setCurrentIndex(i) - return - - def keyPressEvent(self, e): - """Reimplemented to close the window when escape is hitted""" - if e.key() == QtCore.Qt.Key_Escape: - self.close() - else: - super(PlotCreator, self).keyPressEvent(e) diff --git a/psyplot_gui/preferences.py b/psyplot_gui/preferences.py deleted file mode 100644 index f90e64f..0000000 --- a/psyplot_gui/preferences.py +++ /dev/null @@ -1,716 +0,0 @@ -"""Preferences widget for psyplot_gui - -This module defines the :class:`Preferences` widget that creates an interface -to the rcParams of psyplot and psyplot_gui""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -from warnings import warn - -import yaml -from psyplot.config.rcsetup import RcParams, psyplot_fname -from psyplot.config.rcsetup import rcParams as psy_rcParams - -from psyplot_gui import rcParams as rcParams -from psyplot_gui.common import get_icon -from psyplot_gui.compat.qtcompat import ( - QAbstractItemView, - QAction, - QDialog, - QDialogButtonBox, - QFileDialog, - QHBoxLayout, - QIcon, - QLabel, - QListView, - QListWidget, - QListWidgetItem, - QMenu, - QPushButton, - QScrollArea, - QSplitter, - QStackedWidget, - Qt, - QtCore, - QTextEdit, - QtGui, - QToolButton, - QTreeWidget, - QTreeWidgetItem, - QVBoxLayout, - QWidget, - asstring, - with_qt5, -) - - -class ConfigPage(object): - """An abstract base class for configuration pages""" - - #: A signal that shall be emitted if the validation state changes - validChanged = QtCore.pyqtSignal(bool) - - #: A signal that is emitted if changes are propsed. The signal should be - #: emitted with the instance of the page itself - propose_changes = QtCore.pyqtSignal(object) - - #: The title for the config page - title = None - - #: The icon of the page - icon = None - - #: :class:`bool` that is True, if the changes in this ConfigPage are set - #: immediately - auto_updates = False - - @property - def is_valid(self): - """Check whether the page is valid""" - raise NotImplementedError - - @property - def changed(self): - """Check whether the preferences will change""" - raise NotImplementedError - - def initialize(self): - """Initialize the page""" - raise NotImplementedError - - def apply_changes(self): - """Apply the planned changes""" - raise NotImplementedError - - -class RcParamsTree(QTreeWidget): - """A QTreeWidget that can be used to display a RcParams instance - - This widget is populated by a :class:`psyplot.config.rcsetup.RcParams` - instance and displays whether the values are valid or not""" - - #: A signal that shall be emitted if the validation state changes - validChanged = QtCore.pyqtSignal(bool) - - #: A signal that is emitted if changes are propsed. It is either emitted - #: with the parent of this instance (if this is not None) or with the - #: instance itself - propose_changes = QtCore.pyqtSignal(object) - - #: The :class:`~psyplot.config.rcsetup.RcParams` to display - rc = None - - #: list of :class:`bool`. A boolean for each rcParams key that states - #: whether the proposed value is valid or not - valid = [] - - value_col = 2 - - def __init__(self, rcParams, validators, descriptions, *args, **kwargs): - """ - Parameters - ---------- - rcParams: dict - The dictionary that contains the rcParams - validators: dict - A mapping from the `rcParams` key to the validation function for - the corresponding value - descriptions: dict - A mapping from the `rcParams` key to it's description - - See Also - -------- - psyplot.config.rcsetup.RcParams - psyplot.config.rcsetup.RcParams.validate - psyplot.config.rcsetup.RcParams.descriptions - """ - super(RcParamsTree, self).__init__(*args, **kwargs) - self.rc = rcParams - self.validators = validators - self.descriptions = descriptions - self.setContextMenuPolicy(Qt.CustomContextMenu) - self.customContextMenuRequested.connect(self.open_menu) - self.setColumnCount(self.value_col + 1) - self.setHeaderLabels(["RcParams key", "", "Value"]) - - @property - def is_valid(self): - """True if all the proposed values in this tree are valid""" - return all(self.valid) - - @property - def top_level_items(self): - """An iterator over the topLevelItems in this tree""" - return map(self.topLevelItem, range(self.topLevelItemCount())) - - def initialize(self): - """Fill the items of the :attr:`rc` into the tree""" - rcParams = self.rc - descriptions = self.descriptions - self.valid = [True] * len(rcParams) - validators = self.validators - vcol = self.value_col - for i, (key, val) in enumerate(sorted(rcParams.items())): - item = QTreeWidgetItem(0) - item.setText(0, key) - item.setToolTip(0, key) - item.setIcon(1, QIcon(get_icon("valid.png"))) - desc = descriptions.get(key) - if desc: - item.setText(vcol, desc) - item.setToolTip(vcol, desc) - child = QTreeWidgetItem(0) - item.addChild(child) - self.addTopLevelItem(item) - editor = QTextEdit(self) - # set maximal height of the editor to 3 rows - editor.setMaximumHeight( - 4 * QtGui.QFontMetrics(editor.font()).height() - ) - editor.setPlainText(yaml.dump(val)) - self.setItemWidget(child, vcol, editor) - editor.textChanged.connect( - self.set_icon_func(i, item, validators[key]) - ) - self.resizeColumnToContents(0) - self.resizeColumnToContents(1) - - def set_icon_func(self, i, item, validator): - """Create a function to change the icon of one topLevelItem - - This method creates a function that can be called when the value of an - item changes to display it's valid state. The returned function changes - the icon of the given topLevelItem depending on - whether the proposed changes are valid or not and it modifies the - :attr:`valid` attribute accordingly - - Parameters - ---------- - i: int - The index of the topLevelItem - item: QTreeWidgetItem - The topLevelItem - validator: func - The validation function - - Returns - ------- - function - The function that can be called to set the correct icon""" - - def func(): - editor = self.itemWidget(item.child(0), self.value_col) - s = asstring(editor.toPlainText()) - try: - val = yaml.load(s, Loader=yaml.Loader) - except Exception as e: - item.setIcon(1, QIcon(get_icon("warning.png"))) - item.setToolTip(1, "Could not parse yaml code: %s" % e) - self.set_valid(i, False) - return - try: - validator(val) - except Exception as e: - item.setIcon(1, QIcon(get_icon("invalid.png"))) - item.setToolTip(1, "Wrong value: %s" % e) - self.set_valid(i, False) - else: - item.setIcon(1, QIcon(get_icon("valid.png"))) - self.set_valid(i, True) - self.propose_changes.emit(self.parent() or self) - - return func - - def set_valid(self, i, b): - """Set the validation status - - If the validation status changed compared to the old one, the - :attr:`validChanged` signal is emitted - - Parameters - ---------- - i: int - The index of the topLevelItem - b: bool - The valid state of the item - """ - old = self.is_valid - self.valid[i] = b - new = self.is_valid - if new is not old: - self.validChanged.emit(new) - - def open_menu(self, position): - """Open a menu to expand and collapse all items in the tree - - Parameters - ---------- - position: QPosition - The position where to open the menu""" - menu = QMenu() - expand_all_action = QAction("Expand all", self) - expand_all_action.triggered.connect(self.expandAll) - menu.addAction(expand_all_action) - collapse_all_action = QAction("Collapse all", self) - collapse_all_action.triggered.connect(self.collapseAll) - menu.addAction(collapse_all_action) - menu.exec_(self.viewport().mapToGlobal(position)) - - def changed_rc(self, use_items=False): - """Iterate over the changed rcParams - - Parameters - ---------- - use_items: bool - If True, the topLevelItems are used instead of the keys - - Yields - ------ - QTreeWidgetItem or str - The item identifier - object - The proposed value""" - - def equals(item, key, val, orig): - return val != orig - - for t in self._get_rc(equals): - yield t[0 if use_items else 1], t[2] - - def selected_rc(self, use_items=False): - """Iterate over the selected rcParams - - Parameters - ---------- - use_items: bool - If True, the topLevelItems are used instead of the keys - - Yields - ------ - QTreeWidgetItem or str - The item identifier - object - The proposed value""" - - def is_selected(item, key, val, orig): - return item.isSelected() - - for t in self._get_rc(is_selected): - yield t[0 if use_items else 1], t[2] - - def _get_rc(self, filter_func=None): - """Iterate over the rcParams - - This function applies the given `filter_func` to check whether the - item should be included or not - - Parameters - ---------- - filter_func: function - A function that accepts the following arguments: - - item - The QTreeWidgetItem - key - The rcParams key - val - The proposed value - orig - The current value - - Yields - ------ - QTreeWidgetItem - The corresponding topLevelItem - str - The rcParams key - object - The proposed value - object - The current value - """ - - def no_check(item, key, val, orig): - return True - - rc = self.rc - filter_func = filter_func or no_check - for item in self.top_level_items: - key = asstring(item.text(0)) - editor = self.itemWidget(item.child(0), self.value_col) - val = yaml.load(asstring(editor.toPlainText()), Loader=yaml.Loader) - try: - val = rc.validate[key](val) - except Exception: - pass - try: - include = filter_func(item, key, val, rc[key]) - except Exception: - warn("Could not check state for %s key" % key, RuntimeWarning) - else: - if include: - yield (item, key, val, rc[key]) - - def apply_changes(self): - """Update the :attr:`rc` with the proposed changes""" - new = dict(self.changed_rc()) - if new != self.rc: - self.rc.update(new) - - def select_changes(self): - """Select all the items that changed comparing to the current rcParams""" - for item, val in self.changed_rc(True): - item.setSelected(True) - - -class RcParamsWidget(ConfigPage, QWidget): - """A configuration page for RcParams instances - - This page displays the :class:`psyplot.config.rcsetup.RcParams` instance in - the :attr:`rc` attribute and let's the user modify it. - - Notes - ----- - After the initialization, you have to call the :meth:`initialize` method""" - - #: the rcParams to use (must be implemented by subclasses) - rc = None - - #: the :class:`RcParamsTree` that is used to display the rcParams - tree = None - - @property - def propose_changes(self): - """A signal that is emitted if the user changes the values in the - rcParams""" - return self.tree.propose_changes - - @property - def validChanged(self): - """A signal that is emitted if the user changes the valid state of this - page""" - return self.tree.validChanged - - @property - def changed(self): - """True if any changes are proposed by this config page""" - return bool(next(self.tree.changed_rc(), None)) - - @property - def is_valid(self): - """True if all the settings are valid""" - return self.tree.is_valid - - @property - def icon(self): - """The icon of this instance in the :class:`Preferences` dialog""" - return QIcon(get_icon("rcParams.png")) - - def __init__(self, *args, **kwargs): - super(RcParamsWidget, self).__init__(*args, **kwargs) - self.vbox = vbox = QVBoxLayout() - - self.description = QLabel( - "

Modify the rcParams for your need. Changes will not be applied" - " until you click the Apply or Ok button.

" - "

Values must be entered in yaml syntax

", - parent=self, - ) - vbox.addWidget(self.description) - self.tree = tree = RcParamsTree( - self.rc, - getattr(self.rc, "validate", None), - getattr(self.rc, "descriptions", None), - parent=self, - ) - tree.setSelectionMode(QAbstractItemView.MultiSelection) - vbox.addWidget(self.tree) - - self.bt_select_all = QPushButton("Select All", self) - self.bt_select_changed = QPushButton("Select changes", self) - self.bt_select_none = QPushButton("Clear Selection", self) - self.bt_export = QToolButton(self) - self.bt_export.setText("Export Selection...") - self.bt_export.setToolTip("Export the selected rcParams to a file") - self.bt_export.setPopupMode(QToolButton.InstantPopup) - self.export_menu = export_menu = QMenu(self) - export_menu.addAction(self.save_settings_action()) - export_menu.addAction(self.save_settings_action(True)) - self.bt_export.setMenu(export_menu) - hbox = QHBoxLayout() - hbox.addWidget(self.bt_select_all) - hbox.addWidget(self.bt_select_changed) - hbox.addWidget(self.bt_select_none) - hbox.addStretch(1) - hbox.addWidget(self.bt_export) - vbox.addLayout(hbox) - - self.setLayout(vbox) - - self.bt_select_all.clicked.connect(self.tree.selectAll) - self.bt_select_none.clicked.connect(self.tree.clearSelection) - self.bt_select_changed.clicked.connect(self.tree.select_changes) - - def save_settings_action(self, update=False, target=None): - """Create an action to save the selected settings in the :attr:`tree` - - Parameters - ---------- - update: bool - If True, it is expected that the file already exists and it will be - updated. Otherwise, existing files will be overwritten - """ - - def func(): - if update: - meth = QFileDialog.getOpenFileName - else: - meth = QFileDialog.getSaveFileName - if target is None: - fname = meth( - self, - "Select a file to %s" % ("update" if update else "create"), - self.default_path, - "YAML files (*.yml);;" "All files (*)", - ) - if with_qt5: # the filter is passed as well - fname = fname[0] - else: - fname = target - if not fname: - return - if update: - rc = self.rc.__class__(defaultParams=self.rc.defaultParams) - rc.load_from_file(fname) - old_keys = list(rc) - selected = dict(self.tree.selected_rc()) - new_keys = list(selected) - rc.update(selected) - rc.dump( - fname, include_keys=old_keys + new_keys, exclude_keys=[] - ) - else: - rc = self.rc.__class__( - self.tree.selected_rc(), - defaultParams=self.rc.defaultParams, - ) - rc.dump(fname, exclude_keys=[]) - - action = QAction("Update..." if update else "Overwrite...", self) - action.triggered.connect(func) - return action - - def initialize(self, rcParams=None, validators=None, descriptions=None): - """Initialize the config page - - Parameters - ---------- - rcParams: dict - The rcParams to use. If None, the :attr:`rc` attribute of this - instance is used - validators: dict - A mapping from the `rcParams` key to the corresponding validation - function for the value. If None, the - :attr:`~psyplot.config.rcsetup.RcParams.validate` attribute of the - :attr:`rc` attribute is used - descriptions: dict - A mapping from the `rcParams` key to it's description. If None, the - :attr:`~psyplot.config.rcsetup.RcParams.descriptions` attribute of - the :attr:`rc` attribute is used""" - if rcParams is not None: - self.rc = rcParams - self.tree.rc = rcParams - if validators is not None: - self.tree.validators = validators - if descriptions is not None: - self.tree.descriptions = descriptions - self.tree.initialize() - - def apply_changes(self): - """Apply the changes in the config page""" - self.tree.apply_changes() - - -class GuiRcParamsWidget(RcParamsWidget): - """The config page for the :class:`psyplot_gui.config.rcsetup.rcParams`""" - - rc = rcParams - - title = "GUI defaults" - - default_path = psyplot_fname( - "PSYPLOTGUIRC", "psyplotguirc.yml", if_exists=False - ) - - -class PsyRcParamsWidget(RcParamsWidget): - """The config page for the :class:`psyplot.config.rcsetup.rcParams`""" - - rc = psy_rcParams - - title = "psyplot defaults" - - default_path = psyplot_fname(if_exists=False) - - -class Prefences(QDialog): - """Preferences dialog""" - - @property - def bt_apply(self): - return self.bbox.button(QDialogButtonBox.Apply) - - @property - def pages(self): - return map(self.get_page, range(self.pages_widget.count())) - - def __init__(self, main=None): - super(Prefences, self).__init__(parent=main) - self.setWindowTitle("Preferences") - - # Widgets - self.pages_widget = QStackedWidget() - self.contents_widget = QListWidget() - self.bt_reset = QPushButton("Reset to defaults") - self.bt_load_plugins = QPushButton("Load plugin pages") - self.bt_load_plugins.setToolTip( - "Load the rcParams for the plugins in separate pages" - ) - - self.bbox = bbox = QDialogButtonBox( - QDialogButtonBox.Ok - | QDialogButtonBox.Apply - | QDialogButtonBox.Cancel - ) - - # Widgets setup - # Destroying the C++ object right after closing the dialog box, - # otherwise it may be garbage-collected in another QThread - # (e.g. the editor's analysis thread in Spyder), thus leading to - # a segmentation fault on UNIX or an application crash on Windows - self.setAttribute(Qt.WA_DeleteOnClose) - self.setWindowTitle("Preferences") - self.contents_widget.setMovement(QListView.Static) - self.contents_widget.setSpacing(1) - self.contents_widget.setCurrentRow(0) - - # Layout - hsplitter = QSplitter() - hsplitter.addWidget(self.contents_widget) - hsplitter.addWidget(self.pages_widget) - hsplitter.setStretchFactor(1, 1) - - btnlayout = QHBoxLayout() - btnlayout.addWidget(self.bt_reset) - btnlayout.addWidget(self.bt_load_plugins) - btnlayout.addStretch(1) - btnlayout.addWidget(bbox) - - vlayout = QVBoxLayout() - vlayout.addWidget(hsplitter) - vlayout.addLayout(btnlayout) - - self.setLayout(vlayout) - - # Signals and slots - if main is not None: - self.bt_reset.clicked.connect(main.reset_rcParams) - self.bt_load_plugins.clicked.connect(self.load_plugin_pages) - self.pages_widget.currentChanged.connect(self.current_page_changed) - self.contents_widget.currentRowChanged.connect( - self.pages_widget.setCurrentIndex - ) - bbox.accepted.connect(self.accept) - bbox.rejected.connect(self.reject) - self.bt_apply.clicked.connect(self.apply_clicked) - self.bt_apply.setEnabled(False) - - def set_current_index(self, index): - """Set current page index""" - self.contents_widget.setCurrentRow(index) - - def current_page_changed(self, index): - configpage = self.get_page(index) - self.bt_apply.setVisible(not configpage.auto_updates) - self.check_changes(configpage) - - def get_page(self, index=None): - """Return page widget""" - if index is None: - widget = self.pages_widget.currentWidget() - else: - widget = self.pages_widget.widget(index) - return widget.widget() - - def accept(self): - """Reimplement Qt method""" - for configpage in self.pages: - if not configpage.is_valid: - continue - configpage.apply_changes() - QDialog.accept(self) - - def apply_clicked(self): - # Apply button was clicked - configpage = self.get_page() - if configpage.is_valid: - configpage.apply_changes() - self.check_changes(configpage) - - def add_page(self, widget): - """Add a new page to the preferences dialog - - Parameters - ---------- - widget: ConfigPage - The page to add""" - widget.validChanged.connect(self.bt_apply.setEnabled) - widget.validChanged.connect( - self.bbox.button(QDialogButtonBox.Ok).setEnabled - ) - scrollarea = QScrollArea(self) - scrollarea.setWidgetResizable(True) - scrollarea.setWidget(widget) - self.pages_widget.addWidget(scrollarea) - item = QListWidgetItem(self.contents_widget) - try: - item.setIcon(widget.icon) - except TypeError: - pass - item.setText(widget.title) - item.setFlags(Qt.ItemIsSelectable | Qt.ItemIsEnabled) - item.setSizeHint(QtCore.QSize(0, 25)) - widget.propose_changes.connect(self.check_changes) - - def check_changes(self, configpage): - """Enable the apply button if there are changes to the settings""" - if configpage != self.get_page(): - return - self.bt_apply.setEnabled( - not configpage.auto_updates - and configpage.is_valid - and configpage.changed - ) - - def load_plugin_pages(self): - """Load the rcParams for the plugins in separate pages""" - validators = psy_rcParams.validate - descriptions = psy_rcParams.descriptions - for ep in psy_rcParams._load_plugin_entrypoints(): - plugin = ep.load() - rc = getattr(plugin, "rcParams", None) - if rc is None: - rc = RcParams() - w = RcParamsWidget(parent=self) - w.title = "rcParams of " + ep.module - w.default_path = PsyRcParamsWidget.default_path - w.initialize( - rcParams=rc, validators=validators, descriptions=descriptions - ) - # use the full rcParams after initialization - w.rc = psy_rcParams - self.add_page(w) diff --git a/psyplot_gui/sphinx_supp/__init__.py b/psyplot_gui/sphinx_supp/__init__.py deleted file mode 100644 index bf40e2e..0000000 --- a/psyplot_gui/sphinx_supp/__init__.py +++ /dev/null @@ -1,7 +0,0 @@ -"""Supplementary files for building the docs with sphinx.""" - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only diff --git a/psyplot_gui/sphinx_supp/conf.py b/psyplot_gui/sphinx_supp/conf.py deleted file mode 100755 index 658a18a..0000000 --- a/psyplot_gui/sphinx_supp/conf.py +++ /dev/null @@ -1,160 +0,0 @@ -# -*- coding: utf-8 -*- -# -# psyplot documentation build configuration file, created by -# sphinx-quickstart on Mon Jul 20 18:01:33 2015. -# -# This file is execfile()d with the current directory set to its -# containing dir. -# -# Note that not all possible configuration values are present in this -# autogenerated file. -# -# All configuration values have a default; values that are commented out -# serve to show the default. - -# SPDX-FileCopyrightText: 2016-2024 University of Lausanne -# SPDX-FileCopyrightText: 2020-2021 Helmholtz-Zentrum Geesthacht -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -import re -import sys -from itertools import product - -import psyplot_gui - -# -- General configuration ------------------------------------------------ - -# Add any Sphinx extension module names here, as strings. They can be -# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom -# ones. -extensions = [ - "sphinx.ext.autosummary", - "sphinx.ext.todo", - "sphinx.ext.viewcode", - "psyplot.sphinxext.extended_napoleon", -] - -if psyplot_gui.rcParams["help_explorer.use_intersphinx"] is None: - if sys.platform.startswith("win"): - use_intersphinx = False - else: - use_intersphinx = psyplot_gui.rcParams["help_explorer.online"] -else: - use_intersphinx = psyplot_gui.rcParams["help_explorer.use_intersphinx"] - -if use_intersphinx: - extensions.append("sphinx.ext.intersphinx") -del use_intersphinx - -autodoc_default_options = {"show_inheritance": True} - -try: - import autodocsumm # noqa: F401 -except ImportError: - pass -else: - extensions.append("autodocsumm") - autodoc_default_options["autosummary"] = True - not_document_data = [ - "psyplot.config.rcsetup.defaultParams", - "psyplot.config.rcsetup.rcParams", - ] - -# Add any paths that contain templates here, relative to this directory. -templates_path = ["_templates"] - -napoleon_use_admonition_for_examples = True - -# The suffix(es) of source filenames. -# You can specify multiple suffix as a list of string: -source_suffix = ".rst" - -# The encoding of source files. -# source_encoding = 'utf-8-sig' - -# The master toctree document. -master_doc = "psyplot" - -autoclass_content = "both" - -# General information about the project. -project = "psyplot Help" -copyright = psyplot_gui.__copyright__ -author = psyplot_gui.__author__ - -# The version info for the project you're documenting, acts as replacement for -# |version| and |release|, also used in various other places throughout the -# built documents. -# -# The short X.Y version. -version = re.match(r"\d+\.\d+\.\d+", psyplot_gui.__version__).group() -# The full version, including alpha/beta/rc tags. -release = psyplot_gui.__version__ -# -# This is also used if you do content translation via gettext catalogs. -# Usually you set "language" from the command line for these cases. -language = None - -# List of patterns, relative to source directory, that match files and -# directories to ignore when looking for source files. -exclude_patterns = ["_build"] - -# The name of the Pygments (syntax highlighting) style to use. -pygments_style = "sphinx" - - -# -- Options for HTML output ---------------------------------------------- - -# The theme to use for HTML and HTML Help pages. See the documentation for -# a list of builtin themes. -html_theme = "sphinx_rtd_theme" -html_theme_options = { - "prev_next_buttons_location": None, - "collapse_navigation": False, -} - -# Add any paths that contain custom static files (such as style sheets) here, -# relative to this directory. They are copied after the builtin static files, -# so a file named "default.css" will overwrite the builtin "default.css". -html_static_path = ["_static"] - -# Output file base name for HTML help builder. -htmlhelp_basename = "psyplotdoc" - -# Example configuration for intersphinx: refer to the Python standard library. -intersphinx_mapping = { - "pandas": ("https://pandas.pydata.org/pandas-docs/stable/", None), - "numpy": ("https://numpy.org/doc/stable/", None), - "matplotlib": ("https://matplotlib.org/", None), - "sphinx": ("https://www.sphinx-doc.org/en/master/", None), - "xarray": ("https://xarray.pydata.org/en/stable/", None), - "cartopy": ("https://scitools.org.uk/cartopy/docs/latest/", None), - "psyplot": ("https://psyplot.github.io/psyplot/", None), - "psyplot_gui": ("https://psyplot.github.io/psyplot-gui/", None), - "psy_maps": ("https://psyplot.github.io/psy-maps/", None), - "psy_simple": ("https://psyplot.github.io/psy-simple/", None), - "psy_view": ("https://psyplot.github.io/psy-view/", None), - "psy_reg": ("https://psyplot.github.io/psy-reg/", None), - "python": ("https://docs.python.org/3/", None), -} - -replacements = { - "`psyplot.rcParams`": "`~psyplot.config.rcsetup.rcParams`", - "`psyplot.InteractiveList`": "`~psyplot.data.InteractiveList`", - "`psyplot.InteractiveArray`": "`~psyplot.data.InteractiveArray`", - "`psyplot.open_dataset`": "`~psyplot.data.open_dataset`", - "`psyplot.open_mfdataset`": "`~psyplot.data.open_mfdataset`", -} - - -def link_aliases(app, what, name, obj, options, lines): - for (key, val), (i, line) in product( - replacements.items(), enumerate(lines) - ): - lines[i] = line.replace(key, val) - - -def setup(app): - app.connect("autodoc-process-docstring", link_aliases) diff --git a/psyplot_gui/sphinx_supp/psyplot.rst b/psyplot_gui/sphinx_supp/psyplot.rst deleted file mode 100644 index 3456686..0000000 --- a/psyplot_gui/sphinx_supp/psyplot.rst +++ /dev/null @@ -1,9 +0,0 @@ -.. SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -.. -.. SPDX-License-Identifier: CC-BY-4.0 - -=========== -Help Window -=========== - -Welcome to *psyplot*! An interactive framework for code development. diff --git a/py-modindex.html b/py-modindex.html new file mode 100644 index 0000000..63ad626 --- /dev/null +++ b/py-modindex.html @@ -0,0 +1,398 @@ + + + + + + Python Module Index — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
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  • Python Module Index
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Python Module Index

+ +
+ p +
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+ p
+ psyplot_gui +
    + psyplot_gui.backend +
    + psyplot_gui.common +
    + psyplot_gui.compat +
    + psyplot_gui.compat.qtcompat +
    + psyplot_gui.config +
    + psyplot_gui.config.rcsetup +
    + psyplot_gui.console +
    + psyplot_gui.content_widget +
    + psyplot_gui.dataframeeditor +
    + psyplot_gui.dependencies +
    + psyplot_gui.fmt_widget +
    + psyplot_gui.help_explorer +
    + psyplot_gui.main +
    + psyplot_gui.plot_creator +
    + psyplot_gui.preferences +
    + psyplot_gui.sphinx_supp +
    + psyplot_gui.sphinx_supp.conf +
+ + +
+
+ + + +
+
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+
+ + + + \ No newline at end of file diff --git a/pyproject.toml b/pyproject.toml deleted file mode 100644 index ea6ff95..0000000 --- a/pyproject.toml +++ /dev/null @@ -1,149 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -[build-system] -build-backend = 'setuptools.build_meta' -requires = ['setuptools >= 61.0', 'versioneer[toml]'] - -[project] -name = "psyplot-gui" -dynamic = ["version"] -description = "Graphical user interface for the psyplot package" - -readme = "README.md" -keywords = [ - "visualization", - "psyplot", - "netcdf", - "raster", - "cartopy", - "earth-sciences", - "pyqt", - "qt", - "ipython", - "jupyter", - "qtconsole", -] - -authors = [ - { name = 'Philipp S. Sommer', email = 'philipp.sommer@hereon.de' }, -] -maintainers = [ - { name = 'Philipp S. Sommer', email = 'philipp.sommer@hereon.de' }, -] -license = { text = 'LGPL-3.0-only' } - -classifiers = [ - "Development Status :: 5 - Production/Stable", - "License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)", - "Operating System :: OS Independent", - "Programming Language :: Python", - "Programming Language :: Python :: 3", - "Programming Language :: Python :: 3 :: Only", - "Programming Language :: Python :: 3.9", - "Programming Language :: Python :: 3.10", - "Operating System :: OS Independent", -] - -requires-python = '>= 3.9' -dependencies = [ - "psyplot>=1.5.0", - # add your dependencies here - "qtconsole", - "fasteners", - "sphinx>=2.4.0", - "sphinx-rtd-theme", -] - -[project.urls] -Homepage = 'https://codebase.helmholtz.cloud/psyplot/psyplot-gui' -Documentation = "https://psyplot.github.io/psyplot-gui" -Source = "https://codebase.helmholtz.cloud/psyplot/psyplot-gui" -Tracker = "https://codebase.helmholtz.cloud/psyplot/psyplot-gui/issues/" - -[project.optional-dependencies] -testsite = [ - "tox", - "isort==5.12.0", - "black==23.1.0", - "blackdoc==0.3.8", - "flake8==6.0.0", - "pre-commit", - "mypy", - "pytest-cov", - "reuse", - "cffconvert", - "netCDF4", - "dask", - "scipy", - "psutil", -] -docs = [ - "autodocsumm", - "sphinx-rtd-theme", - "hereon-netcdf-sphinxext", - "sphinx-design", - "dask", - "netcdf4", - "psy-simple", - "sphinx-argparse", -] -dev = [ - "psyplot-gui[testsite]", - "psyplot-gui[docs]", - "PyYAML", - "types-PyYAML", -] - - -[tool.mypy] -ignore_missing_imports = true - -[tool.setuptools] -zip-safe = false -license-files = ["LICENSES/*"] - -[tool.setuptools.package-data] -psyplot_gui = [ - "psyplot_gui/sphinx_supp/conf.py", - "psyplot_gui/sphinx_supp/psyplot.rst", - "psyplot_gui/sphinx_supp/_static/*", - "psyplot_gui/icons/*.png", - "psyplot_gui/icons/*.png.license", - "psyplot_gui/icons/*.svg", - "psyplot_gui/icons/*.svg.license", -] - -[tool.setuptools.packages.find] -namespaces = false -exclude = [ - 'docs', - 'tests*', - 'examples' -] - -[tool.pytest.ini_options] -addopts = '-v' - -[tool.versioneer] -VCS = 'git' -style = 'pep440' -versionfile_source = 'psyplot_gui/_version.py' -versionfile_build = 'psyplot_gui/_version.py' -tag_prefix = 'v' -parentdir_prefix = 'psyplot-gui-' - -[tool.isort] -profile = "black" -line_length = 79 -src_paths = ["psyplot_gui"] -float_to_top = true -known_first_party = "psyplot_gui" - -[tool.black] -line-length = 79 -target-version = ['py39'] - -[tool.coverage.run] -omit = ["psyplot_gui/_version.py"] diff --git a/search.html b/search.html new file mode 100644 index 0000000..6e764c5 --- /dev/null +++ b/search.html @@ -0,0 +1,313 @@ + + + + + + Search — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ +
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  • Search
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+ + + + + + + + + \ No newline at end of file diff --git a/searchindex.js b/searchindex.js new file mode 100644 index 0000000..1ff8e92 --- /dev/null +++ b/searchindex.js @@ -0,0 +1 @@ +Search.setIndex({"docnames": ["api", "api/psyplot_gui", "api/psyplot_gui.backend", "api/psyplot_gui.common", "api/psyplot_gui.compat", "api/psyplot_gui.compat.qtcompat", "api/psyplot_gui.config", "api/psyplot_gui.config.rcsetup", "api/psyplot_gui.console", "api/psyplot_gui.content_widget", "api/psyplot_gui.dataframeeditor", "api/psyplot_gui.dependencies", "api/psyplot_gui.fmt_widget", "api/psyplot_gui.help_explorer", "api/psyplot_gui.main", "api/psyplot_gui.plot_creator", "api/psyplot_gui.preferences", "api/psyplot_gui.sphinx_supp", "api/psyplot_gui.sphinx_supp.conf", "changelog", "command_line", "configuration", "contributing", "getting_started", "index", "installing", "plugins", "todos"], "filenames": ["api.rst", "api/psyplot_gui.rst", "api/psyplot_gui.backend.rst", "api/psyplot_gui.common.rst", "api/psyplot_gui.compat.rst", "api/psyplot_gui.compat.qtcompat.rst", "api/psyplot_gui.config.rst", "api/psyplot_gui.config.rcsetup.rst", "api/psyplot_gui.console.rst", "api/psyplot_gui.content_widget.rst", "api/psyplot_gui.dataframeeditor.rst", "api/psyplot_gui.dependencies.rst", "api/psyplot_gui.fmt_widget.rst", "api/psyplot_gui.help_explorer.rst", "api/psyplot_gui.main.rst", "api/psyplot_gui.plot_creator.rst", "api/psyplot_gui.preferences.rst", "api/psyplot_gui.sphinx_supp.rst", "api/psyplot_gui.sphinx_supp.conf.rst", "changelog.rst", "command_line.rst", "configuration.rst", "contributing.rst", "getting_started.rst", "index.rst", "installing.rst", "plugins.rst", "todos.rst"], "titles": ["API Reference", "psyplot_gui package", "<no title>", "<no title>", "psyplot_gui.compat package", "<no title>", "psyplot_gui.config package", "<no title>", "<no title>", "<no title>", "<no title>", "<no title>", "<no title>", "<no title>", "<no title>", "<no title>", "<no title>", 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{"sphinx.domains.c": 3, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 9, "sphinx.domains.index": 1, "sphinx.domains.javascript": 3, "sphinx.domains.math": 2, "sphinx.domains.python": 4, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx.ext.intersphinx": 1, "sphinx.ext.todo": 2, "sphinx.ext.viewcode": 1, "sphinx": 60}, "alltitles": {"API Reference": [[0, "api-reference"]], "psyplot_gui package": [[1, "module-psyplot_gui"]], "Subpackages": [[1, "subpackages"]], "Submodules": [[1, "submodules"], [4, "submodules"], [6, "submodules"], [17, "submodules"]], "psyplot_gui.compat package": [[4, "module-psyplot_gui.compat"]], "psyplot_gui.config package": [[6, "module-psyplot_gui.config"]], "psyplot_gui.sphinx_supp package": [[17, "module-psyplot_gui.sphinx_supp"]], "Changelog": [[19, "changelog"]], "v1.5.0": [[19, "v1-5-0"]], "Changed": [[19, "changed"], [19, "id3"], [19, "id4"], [19, "id7"], [19, "id8"], [19, "id11"]], "Fixed": [[19, "fixed"]], 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"The Project content": [[23, "the-project-content"]], "The formatoptions widget": [[23, "the-formatoptions-widget"]], "Welcome to psyplot-gui\u2019s documentation!": [[24, "welcome-to-psyplot-gui-s-documentation"]], "How to cite this software": [[24, "how-to-cite-this-software"]], "License information": [[24, "license-information"]], "Indices and tables": [[24, "indices-and-tables"]], "Installation": [[25, "installation"]], "How to install": [[25, "how-to-install"]], "Installation using conda": [[25, "installation-using-conda"]], "Installation using pip": [[25, "installation-using-pip"]], "Dependencies": [[25, "dependencies"]], "Required dependencies": [[25, "required-dependencies"]], "Plugin configuration": [[26, "plugin-configuration"], [26, "plugin-config"]], "Developing plugins": [[26, "developing-plugins"]], "ToDos": [[27, "todos"]]}, "indexentries": {"listguipluginsaction (class in psyplot_gui)": [[1, "psyplot_gui.ListGuiPluginsAction"]], "unit_testing (in module psyplot_gui)": 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"psyplot_gui.send_files_to_psyplot"]], "start_app() (in module psyplot_gui)": [[1, "psyplot_gui.start_app"]], "figurecanvas (in module psyplot_gui.backend)": [[2, "psyplot_gui.backend.FigureCanvas"]], "figuremanager (in module psyplot_gui.backend)": [[2, "psyplot_gui.backend.FigureManager"]], "figurewidget (class in psyplot_gui.backend)": [[2, "psyplot_gui.backend.FigureWidget"]], "figuresdock (class in psyplot_gui.backend)": [[2, "psyplot_gui.backend.FiguresDock"]], "psyplotcanvas (class in psyplot_gui.backend)": [[2, "psyplot_gui.backend.PsyplotCanvas"]], "psyplotcanvasmanager (class in psyplot_gui.backend)": [[2, "psyplot_gui.backend.PsyplotCanvasManager"]], "close() (psyplot_gui.backend.figuresdock method)": [[2, "psyplot_gui.backend.FiguresDock.close"]], "dock_cls (psyplot_gui.backend.figurewidget attribute)": [[2, "psyplot_gui.backend.FigureWidget.dock_cls"]], "new_figure_manager() (in module psyplot_gui.backend)": [[2, "psyplot_gui.backend.new_figure_manager"]], "new_figure_manager_given_figure() (in module psyplot_gui.backend)": [[2, "psyplot_gui.backend.new_figure_manager_given_figure"]], "psyplot_gui.backend": [[2, "module-psyplot_gui.backend"]], "resize() (psyplot_gui.backend.psyplotcanvasmanager method)": [[2, "psyplot_gui.backend.PsyplotCanvasManager.resize"]], "resizeevent() (psyplot_gui.backend.psyplotcanvas method)": [[2, "psyplot_gui.backend.PsyplotCanvas.resizeEvent"]], "statusbar() (psyplot_gui.backend.psyplotcanvasmanager method)": [[2, "psyplot_gui.backend.PsyplotCanvasManager.statusBar"]], "toolbar (psyplot_gui.backend.psyplotcanvasmanager attribute)": [[2, "psyplot_gui.backend.PsyplotCanvasManager.toolbar"]], "dockmixin (class in psyplot_gui.common)": [[3, "psyplot_gui.common.DockMixin"]], "listvalidator (class in psyplot_gui.common)": [[3, "psyplot_gui.common.ListValidator"]], "loadfromconsolebutton (class in psyplot_gui.common)": [[3, "psyplot_gui.common.LoadFromConsoleButton"]], "pyerrormessage (class in psyplot_gui.common)": [[3, "psyplot_gui.common.PyErrorMessage"]], "streamtologger (class in psyplot_gui.common)": [[3, "psyplot_gui.common.StreamToLogger"]], "check() (psyplot_gui.common.loadfromconsolebutton method)": [[3, "psyplot_gui.common.LoadFromConsoleButton.check"]], "config_page (psyplot_gui.common.dockmixin attribute)": [[3, "psyplot_gui.common.DockMixin.config_page"]], "create_central_widget_action() (psyplot_gui.common.dockmixin method)": [[3, "psyplot_gui.common.DockMixin.create_central_widget_action"]], "create_view_action() (psyplot_gui.common.dockmixin method)": [[3, "psyplot_gui.common.DockMixin.create_view_action"]], "dock (psyplot_gui.common.dockmixin attribute)": [[3, "psyplot_gui.common.DockMixin.dock"]], "dock_cls (psyplot_gui.common.dockmixin attribute)": [[3, "psyplot_gui.common.DockMixin.dock_cls"]], "dock_position (psyplot_gui.common.dockmixin attribute)": [[3, "psyplot_gui.common.DockMixin.dock_position"]], "excepthook() (psyplot_gui.common.pyerrormessage 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psyplot_gui.common)": [[3, "psyplot_gui.common.is_running_tests"]], "is_shown (psyplot_gui.common.dockmixin property)": [[3, "psyplot_gui.common.DockMixin.is_shown"]], "object_loaded (psyplot_gui.common.loadfromconsolebutton attribute)": [[3, "psyplot_gui.common.LoadFromConsoleButton.object_loaded"]], "position_dock() (psyplot_gui.common.dockmixin method)": [[3, "psyplot_gui.common.DockMixin.position_dock"]], "potential_object_names (psyplot_gui.common.loadfromconsolebutton property)": [[3, "psyplot_gui.common.LoadFromConsoleButton.potential_object_names"]], "psyplot_gui.common": [[3, "module-psyplot_gui.common"]], "remove_plugin() (psyplot_gui.common.dockmixin method)": [[3, "psyplot_gui.common.DockMixin.remove_plugin"]], "showtraceback() (psyplot_gui.common.pyerrormessage method)": [[3, "psyplot_gui.common.PyErrorMessage.showTraceback"]], "show_plugin() (psyplot_gui.common.dockmixin method)": [[3, "psyplot_gui.common.DockMixin.show_plugin"]], "show_status_message() (psyplot_gui.common.dockmixin method)": [[3, "psyplot_gui.common.DockMixin.show_status_message"]], "title (psyplot_gui.common.dockmixin attribute)": [[3, "psyplot_gui.common.DockMixin.title"]], "to_dock() (psyplot_gui.common.dockmixin method)": [[3, "psyplot_gui.common.DockMixin.to_dock"]], "write() (psyplot_gui.common.streamtologger method)": [[3, "psyplot_gui.common.StreamToLogger.write"]], "psyplot_gui.compat": [[4, "module-psyplot_gui.compat"]], "asstring() (in module psyplot_gui.compat.qtcompat)": [[5, "psyplot_gui.compat.qtcompat.asstring"]], "isstring() (in module psyplot_gui.compat.qtcompat)": [[5, "psyplot_gui.compat.qtcompat.isstring"]], "psyplot_gui.compat.qtcompat": [[5, "module-psyplot_gui.compat.qtcompat"]], "config_path (in module psyplot_gui.config)": [[6, "psyplot_gui.config.config_path"]], "logcfg_path (in module psyplot_gui.config)": [[6, "psyplot_gui.config.logcfg_path"]], "psyplot_gui.config": [[6, "module-psyplot_gui.config"]], "guircparams (class in 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psyplot_gui.config.rcsetup)": [[7, "psyplot_gui.config.rcsetup.validate_none"]], "validate_str() (in module psyplot_gui.config.rcsetup)": [[7, "psyplot_gui.config.rcsetup.validate_str"]], "consolewidget (class in psyplot_gui.console)": [[8, "psyplot_gui.console.ConsoleWidget"]], "ipythoncontrol (class in psyplot_gui.console)": [[8, "psyplot_gui.console.IPythonControl"]], "close() (psyplot_gui.console.consolewidget method)": [[8, "psyplot_gui.console.ConsoleWidget.close"]], "custom_control (psyplot_gui.console.consolewidget attribute)": [[8, "psyplot_gui.console.ConsoleWidget.custom_control"]], "dock_position (psyplot_gui.console.consolewidget attribute)": [[8, "psyplot_gui.console.ConsoleWidget.dock_position"]], "eventfilter() (psyplot_gui.console.consolewidget method)": [[8, "psyplot_gui.console.ConsoleWidget.eventFilter"]], "get_current_object() (psyplot_gui.console.consolewidget method)": [[8, "psyplot_gui.console.ConsoleWidget.get_current_object"]], "get_obj() (psyplot_gui.console.consolewidget method)": [[8, "psyplot_gui.console.ConsoleWidget.get_obj"]], "init_asyncio_patch() (in module psyplot_gui.console)": [[8, "psyplot_gui.console.init_asyncio_patch"]], "intro_msg (psyplot_gui.console.consolewidget attribute)": [[8, "psyplot_gui.console.ConsoleWidget.intro_msg"]], "keypressevent() (psyplot_gui.console.ipythoncontrol method)": [[8, "psyplot_gui.console.IPythonControl.keyPressEvent"]], "psyplot_gui.console": [[8, "module-psyplot_gui.console"]], "rc (psyplot_gui.console.consolewidget attribute)": [[8, "psyplot_gui.console.ConsoleWidget.rc"]], "run_command (psyplot_gui.console.consolewidget attribute)": [[8, "psyplot_gui.console.ConsoleWidget.run_command"]], "run_command_in_shell() (psyplot_gui.console.consolewidget method)": [[8, "psyplot_gui.console.ConsoleWidget.run_command_in_shell"]], "run_script (psyplot_gui.console.consolewidget attribute)": [[8, "psyplot_gui.console.ConsoleWidget.run_script"]], "run_script_in_shell() (psyplot_gui.console.consolewidget method)": [[8, "psyplot_gui.console.ConsoleWidget.run_script_in_shell"]], "show_current_help() (psyplot_gui.console.consolewidget method)": [[8, "psyplot_gui.console.ConsoleWidget.show_current_help"]], "title (psyplot_gui.console.consolewidget attribute)": [[8, "psyplot_gui.console.ConsoleWidget.title"]], "update_mp() (psyplot_gui.console.consolewidget method)": [[8, "psyplot_gui.console.ConsoleWidget.update_mp"]], "update_sp() (psyplot_gui.console.consolewidget method)": [[8, "psyplot_gui.console.ConsoleWidget.update_sp"]], "arrayitem (class in psyplot_gui.content_widget)": [[9, "psyplot_gui.content_widget.ArrayItem"]], "datasettree (class in psyplot_gui.content_widget)": [[9, "psyplot_gui.content_widget.DatasetTree"]], "datasettreeitem (class in psyplot_gui.content_widget)": [[9, "psyplot_gui.content_widget.DatasetTreeItem"]], "figurestree (class in psyplot_gui.content_widget)": [[9, "psyplot_gui.content_widget.FiguresTree"]], "figurestreeitem (class in psyplot_gui.content_widget)": [[9, "psyplot_gui.content_widget.FiguresTreeItem"]], "plotterlist (class in psyplot_gui.content_widget)": [[9, "psyplot_gui.content_widget.PlotterList"]], "projectcontent (class in psyplot_gui.content_widget)": [[9, "psyplot_gui.content_widget.ProjectContent"]], "projectcontentwidget (class in psyplot_gui.content_widget)": [[9, "psyplot_gui.content_widget.ProjectContentWidget"]], "selectallbutton (class in psyplot_gui.content_widget)": [[9, "psyplot_gui.content_widget.SelectAllButton"]], "selectnonebutton (class in psyplot_gui.content_widget)": [[9, "psyplot_gui.content_widget.SelectNoneButton"]], "add_attrs() (psyplot_gui.content_widget.datasettreeitem method)": [[9, "psyplot_gui.content_widget.DatasetTreeItem.add_attrs"]], "add_datasets_from_cp() (psyplot_gui.content_widget.datasettree method)": [[9, "psyplot_gui.content_widget.DatasetTree.add_datasets_from_cp"]], "add_figures_from_cp() (psyplot_gui.content_widget.figurestree method)": [[9, "psyplot_gui.content_widget.FiguresTree.add_figures_from_cp"]], "add_plotterlist() (psyplot_gui.content_widget.projectcontent method)": [[9, "psyplot_gui.content_widget.ProjectContent.add_plotterlist"]], "add_variables() (psyplot_gui.content_widget.datasettreeitem method)": [[9, "psyplot_gui.content_widget.DatasetTreeItem.add_variables"]], "arr (psyplot_gui.content_widget.arrayitem attribute)": [[9, "psyplot_gui.content_widget.ArrayItem.arr"]], "array_items (psyplot_gui.content_widget.plotterlist property)": [[9, "psyplot_gui.content_widget.PlotterList.array_items"]], "arrays (psyplot_gui.content_widget.plotterlist property)": [[9, "psyplot_gui.content_widget.PlotterList.arrays"]], "can_import_plotter (psyplot_gui.content_widget.plotterlist attribute)": [[9, "psyplot_gui.content_widget.PlotterList.can_import_plotter"]], "create_dataset_tree() (psyplot_gui.content_widget.datasettree method)": [[9, "psyplot_gui.content_widget.DatasetTree.create_dataset_tree"]], "current_names (psyplot_gui.content_widget.projectcontent property)": [[9, "psyplot_gui.content_widget.ProjectContent.current_names"]], "disconnect_from_array() (psyplot_gui.content_widget.arrayitem method)": [[9, "psyplot_gui.content_widget.ArrayItem.disconnect_from_array"]], "disconnect_from_array() (psyplot_gui.content_widget.figurestreeitem method)": [[9, "psyplot_gui.content_widget.FiguresTreeItem.disconnect_from_array"]], "disconnect_items() (psyplot_gui.content_widget.plotterlist method)": [[9, "psyplot_gui.content_widget.PlotterList.disconnect_items"]], "enable_from_project() (psyplot_gui.content_widget.selectallbutton method)": [[9, "psyplot_gui.content_widget.SelectAllButton.enable_from_project"]], "enable_from_project() (psyplot_gui.content_widget.selectnonebutton method)": [[9, "psyplot_gui.content_widget.SelectNoneButton.enable_from_project"]], "enable_list() (psyplot_gui.content_widget.projectcontent method)": [[9, "psyplot_gui.content_widget.ProjectContent.enable_list"]], "escape_html() (in module psyplot_gui.content_widget)": [[9, "psyplot_gui.content_widget.escape_html"]], "expand_items() (psyplot_gui.content_widget.datasettree method)": [[9, "psyplot_gui.content_widget.DatasetTree.expand_items"]], "expanded_items() (psyplot_gui.content_widget.datasettree method)": [[9, "psyplot_gui.content_widget.DatasetTree.expanded_items"]], "get_plots_item() (psyplot_gui.content_widget.datasettreeitem method)": [[9, "psyplot_gui.content_widget.DatasetTreeItem.get_plots_item"]], "is_coord() (psyplot_gui.content_widget.datasettree static method)": [[9, "psyplot_gui.content_widget.DatasetTree.is_coord"]], "is_empty (psyplot_gui.content_widget.plotterlist attribute)": [[9, "psyplot_gui.content_widget.PlotterList.is_empty"]], "is_variable() (psyplot_gui.content_widget.datasettree static method)": [[9, "psyplot_gui.content_widget.DatasetTree.is_variable"]], "lists (psyplot_gui.content_widget.projectcontent attribute)": [[9, "psyplot_gui.content_widget.ProjectContent.lists"]], "load_variable_desc() (psyplot_gui.content_widget.datasettree method)": [[9, "psyplot_gui.content_widget.DatasetTree.load_variable_desc"]], "make_plot() (psyplot_gui.content_widget.datasettree method)": [[9, "psyplot_gui.content_widget.DatasetTree.make_plot"]], "open_menu() (psyplot_gui.content_widget.datasettree method)": [[9, "psyplot_gui.content_widget.DatasetTree.open_menu"]], "project_attribute (psyplot_gui.content_widget.plotterlist attribute)": [[9, "psyplot_gui.content_widget.PlotterList.project_attribute"]], "psyplot_gui.content_widget": [[9, "module-psyplot_gui.content_widget"]], "refresh_items() (psyplot_gui.content_widget.datasettree method)": [[9, "psyplot_gui.content_widget.DatasetTree.refresh_items"]], "refresh_plots_item() (psyplot_gui.content_widget.datasettreeitem method)": [[9, "psyplot_gui.content_widget.DatasetTreeItem.refresh_plots_item"]], "select_all() (psyplot_gui.content_widget.selectallbutton method)": [[9, "psyplot_gui.content_widget.SelectAllButton.select_all"]], "select_none() (psyplot_gui.content_widget.selectnonebutton method)": [[9, "psyplot_gui.content_widget.SelectNoneButton.select_none"]], "set_columns() (psyplot_gui.content_widget.datasettree method)": [[9, "psyplot_gui.content_widget.DatasetTree.set_columns"]], "set_text_from_array() (psyplot_gui.content_widget.arrayitem method)": [[9, "psyplot_gui.content_widget.ArrayItem.set_text_from_array"]], "set_text_from_array() (psyplot_gui.content_widget.figurestreeitem method)": [[9, "psyplot_gui.content_widget.FiguresTreeItem.set_text_from_array"]], "tooltips (psyplot_gui.content_widget.datasettree attribute)": [[9, "psyplot_gui.content_widget.DatasetTree.tooltips"]], "update_cp() (psyplot_gui.content_widget.plotterlist method)": [[9, "psyplot_gui.content_widget.PlotterList.update_cp"]], "update_current_list() (psyplot_gui.content_widget.projectcontent method)": [[9, "psyplot_gui.content_widget.ProjectContent.update_current_list"]], "update_from_project() (psyplot_gui.content_widget.plotterlist method)": [[9, "psyplot_gui.content_widget.PlotterList.update_from_project"]], "update_lists() (psyplot_gui.content_widget.projectcontent method)": [[9, "psyplot_gui.content_widget.ProjectContent.update_lists"]], "updated_from_project (psyplot_gui.content_widget.plotterlist attribute)": [[9, "psyplot_gui.content_widget.PlotterList.updated_from_project"]], "cols_to_load (psyplot_gui.dataframeeditor.dataframemodel attribute)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.COLS_TO_LOAD"]], "dataframedock (class in psyplot_gui.dataframeeditor)": [[10, "psyplot_gui.dataframeeditor.DataFrameDock"]], "dataframeeditor (class in psyplot_gui.dataframeeditor)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor"]], "dataframemodel (class in psyplot_gui.dataframeeditor)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel"]], "dataframeview (class in psyplot_gui.dataframeeditor)": [[10, "psyplot_gui.dataframeeditor.DataFrameView"]], "frozentableview (class in psyplot_gui.dataframeeditor)": [[10, "psyplot_gui.dataframeeditor.FrozenTableView"]], "rows_to_load (psyplot_gui.dataframeeditor.dataframemodel attribute)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.ROWS_TO_LOAD"]], "bgcolor() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.bgcolor"]], "bool_false_check() (in module psyplot_gui.dataframeeditor)": [[10, "psyplot_gui.dataframeeditor.bool_false_check"]], "can_fetch_more() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.can_fetch_more"]], "cell_edited (psyplot_gui.dataframeeditor.dataframeeditor attribute)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.cell_edited"]], "change_type() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.change_type"]], "clear_table() (psyplot_gui.dataframeeditor.dataframeeditor method)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.clear_table"]], "cleared (psyplot_gui.dataframeeditor.dataframeeditor attribute)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.cleared"]], "close() (psyplot_gui.dataframeeditor.dataframedock method)": [[10, "psyplot_gui.dataframeeditor.DataFrameDock.close"]], "close() (psyplot_gui.dataframeeditor.dataframeeditor method)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.close"]], "columncount() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.columnCount"]], "contextmenuevent() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.contextMenuEvent"]], "contextmenuevent() (psyplot_gui.dataframeeditor.frozentableview method)": [[10, "psyplot_gui.dataframeeditor.FrozenTableView.contextMenuEvent"]], "copy() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.copy"]], "data() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.data"]], "dock_cls (psyplot_gui.dataframeeditor.dataframeeditor attribute)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.dock_cls"]], "fetch_more() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.fetch_more"]], "filled (psyplot_gui.dataframeeditor.dataframeview property)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.filled"]], "flags() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.flags"]], "get_format() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.get_format"]], "get_value() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.get_value"]], "headerdata() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.headerData"]], "hidden (psyplot_gui.dataframeeditor.dataframeeditor property)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.hidden"]], "insertrow() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.insertRow"]], "insertrows() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.insertRows"]], "insert_row_above_selection() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.insert_row_above_selection"]], "insert_row_below_selection() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.insert_row_below_selection"]], "load_more_data() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.load_more_data"]], "maybe_tabify() (psyplot_gui.dataframeeditor.dataframeeditor method)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.maybe_tabify"]], "movecursor() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.moveCursor"]], "open_dataframe() (psyplot_gui.dataframeeditor.dataframeeditor method)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.open_dataframe"]], "psyplot_gui.dataframeeditor": [[10, "module-psyplot_gui.dataframeeditor"]], "reset() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.reset"]], "reset_model() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.reset_model"]], "resizeevent() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.resizeEvent"]], "rowcount() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.rowCount"]], "rows_inserted (psyplot_gui.dataframeeditor.dataframeeditor attribute)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.rows_inserted"]], "scrollto() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.scrollTo"]], "setdata() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.setData"]], "set_df() (psyplot_gui.dataframeeditor.dataframeeditor method)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.set_df"]], "set_df() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.set_df"]], "set_dtypes_changeable() (psyplot_gui.dataframeeditor.dataframeeditor method)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.set_dtypes_changeable"]], "set_format() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.set_format"]], "set_index() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.set_index"]], "set_index_editable() (psyplot_gui.dataframeeditor.dataframeeditor method)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.set_index_editable"]], "set_lbl_size_text() (psyplot_gui.dataframeeditor.dataframeeditor method)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.set_lbl_size_text"]], "setup_menu() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.setup_menu"]], "sort() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.sort"]], "sortbycolumn() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.sortByColumn"]], "to_dock() (psyplot_gui.dataframeeditor.dataframeeditor method)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.to_dock"]], "toggle_fmt_button() (psyplot_gui.dataframeeditor.dataframeeditor method)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.toggle_fmt_button"]], "update_df_index() (psyplot_gui.dataframeeditor.dataframemodel method)": [[10, "psyplot_gui.dataframeeditor.DataFrameModel.update_df_index"]], "update_format() (psyplot_gui.dataframeeditor.dataframeeditor method)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.update_format"]], "update_geometry() (psyplot_gui.dataframeeditor.frozentableview method)": [[10, "psyplot_gui.dataframeeditor.FrozenTableView.update_geometry"]], "update_index_editable() (psyplot_gui.dataframeeditor.dataframeeditor method)": [[10, "psyplot_gui.dataframeeditor.DataFrameEditor.update_index_editable"]], "update_section_height() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.update_section_height"]], "update_section_width() (psyplot_gui.dataframeeditor.dataframeview method)": [[10, "psyplot_gui.dataframeeditor.DataFrameView.update_section_width"]], "dependenciesdialog (class in psyplot_gui.dependencies)": [[11, "psyplot_gui.dependencies.DependenciesDialog"]], "dependenciestree (class in psyplot_gui.dependencies)": [[11, "psyplot_gui.dependencies.DependenciesTree"]], "add_dependencies() (psyplot_gui.dependencies.dependenciestree method)": [[11, "psyplot_gui.dependencies.DependenciesTree.add_dependencies"]], "bt_copy (psyplot_gui.dependencies.dependenciesdialog attribute)": [[11, "psyplot_gui.dependencies.DependenciesDialog.bt_copy"]], "clear_label() (psyplot_gui.dependencies.dependenciesdialog method)": [[11, "psyplot_gui.dependencies.DependenciesDialog.clear_label"]], "copy_selected() (psyplot_gui.dependencies.dependenciesdialog method)": [[11, "psyplot_gui.dependencies.DependenciesDialog.copy_selected"]], "info_label (psyplot_gui.dependencies.dependenciesdialog attribute)": [[11, "psyplot_gui.dependencies.DependenciesDialog.info_label"]], "label (psyplot_gui.dependencies.dependenciesdialog attribute)": [[11, "psyplot_gui.dependencies.DependenciesDialog.label"]], "open_menu() (psyplot_gui.dependencies.dependenciestree method)": [[11, "psyplot_gui.dependencies.DependenciesTree.open_menu"]], "psyplot_gui.dependencies": [[11, "module-psyplot_gui.dependencies"]], "timer (psyplot_gui.dependencies.dependenciesdialog attribute)": [[11, "psyplot_gui.dependencies.DependenciesDialog.timer"]], "tree (psyplot_gui.dependencies.dependenciesdialog attribute)": [[11, "psyplot_gui.dependencies.DependenciesDialog.tree"]], "vbox (psyplot_gui.dependencies.dependenciesdialog attribute)": [[11, "psyplot_gui.dependencies.DependenciesDialog.vbox"]], "dimensionswidget (class in psyplot_gui.fmt_widget)": [[12, "psyplot_gui.fmt_widget.DimensionsWidget"]], "formatoptionwidget (class in psyplot_gui.fmt_widget)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget"]], "clear_text() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.clear_text"]], "fill_combos_from_project() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.fill_combos_from_project"]], "fill_fmt_combo() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.fill_fmt_combo"]], "fmt_combo (psyplot_gui.fmt_widget.formatoptionwidget attribute)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.fmt_combo"]], "fmt_widget (psyplot_gui.fmt_widget.formatoptionwidget attribute)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.fmt_widget"]], "fmto (psyplot_gui.fmt_widget.formatoptionwidget property)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.fmto"]], "get_ds() (psyplot_gui.fmt_widget.dimensionswidget method)": [[12, "psyplot_gui.fmt_widget.DimensionsWidget.get_ds"]], "get_name() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.get_name"]], "get_obj() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.get_obj"]], "get_text() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.get_text"]], "group_combo (psyplot_gui.fmt_widget.formatoptionwidget attribute)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.group_combo"]], "help_explorer (psyplot_gui.fmt_widget.formatoptionwidget attribute)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.help_explorer"]], "insert_from_combo() (psyplot_gui.fmt_widget.dimensionswidget method)": [[12, "psyplot_gui.fmt_widget.DimensionsWidget.insert_from_combo"]], "insert_obj() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.insert_obj"]], "line_edit (psyplot_gui.fmt_widget.formatoptionwidget attribute)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.line_edit"]], "load_fmt_widget() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.load_fmt_widget"]], "multiline_button (psyplot_gui.fmt_widget.formatoptionwidget attribute)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.multiline_button"]], "no_fmtos_update (psyplot_gui.fmt_widget.formatoptionwidget property)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.no_fmtos_update"]], "psyplot_gui.fmt_widget": [[12, "module-psyplot_gui.fmt_widget"]], "refill_from_rc() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.refill_from_rc"]], "remove_fmt_widget() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.remove_fmt_widget"]], "reset_combobox() (psyplot_gui.fmt_widget.dimensionswidget method)": [[12, "psyplot_gui.fmt_widget.DimensionsWidget.reset_combobox"]], "reset_fmt_widget() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.reset_fmt_widget"]], "run_code() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.run_code"]], "set_current_fmt_value() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.set_current_fmt_value"]], "set_dim() (psyplot_gui.fmt_widget.dimensionswidget method)": [[12, "psyplot_gui.fmt_widget.DimensionsWidget.set_dim"]], "set_fmto() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.set_fmto"]], "set_obj() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.set_obj"]], "set_single_selection() (psyplot_gui.fmt_widget.dimensionswidget method)": [[12, "psyplot_gui.fmt_widget.DimensionsWidget.set_single_selection"]], "setup_fmt_completion_model() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.setup_fmt_completion_model"]], "shell (psyplot_gui.fmt_widget.formatoptionwidget property)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.shell"]], "show_all_fmt_info() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.show_all_fmt_info"]], "show_fmt_info() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.show_fmt_info"]], "slice2list() (psyplot_gui.fmt_widget.dimensionswidget method)": [[12, "psyplot_gui.fmt_widget.DimensionsWidget.slice2list"]], "text_edit (psyplot_gui.fmt_widget.formatoptionwidget attribute)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.text_edit"]], "toggle_close_popup() (psyplot_gui.fmt_widget.dimensionswidget method)": [[12, "psyplot_gui.fmt_widget.DimensionsWidget.toggle_close_popup"]], "toggle_line_edit() (psyplot_gui.fmt_widget.formatoptionwidget method)": [[12, "psyplot_gui.fmt_widget.FormatoptionWidget.toggle_line_edit"]], "helpexplorer (class in psyplot_gui.help_explorer)": [[13, "psyplot_gui.help_explorer.HelpExplorer"]], "helpmixin (class in psyplot_gui.help_explorer)": [[13, "psyplot_gui.help_explorer.HelpMixin"]], "sphinxthread (class in psyplot_gui.help_explorer)": [[13, "psyplot_gui.help_explorer.SphinxThread"]], "texthelp (class in psyplot_gui.help_explorer)": [[13, "psyplot_gui.help_explorer.TextHelp"]], "urlbrowser (class in psyplot_gui.help_explorer)": [[13, "psyplot_gui.help_explorer.UrlBrowser"]], "urlcombo (class in psyplot_gui.help_explorer)": [[13, "psyplot_gui.help_explorer.UrlCombo"]], "urlhelp (class in psyplot_gui.help_explorer)": [[13, "psyplot_gui.help_explorer.UrlHelp"]], "add_text_on_top() (psyplot_gui.help_explorer.urlcombo method)": [[13, "psyplot_gui.help_explorer.UrlCombo.add_text_on_top"]], "browse() (psyplot_gui.help_explorer.urlbrowser method)": [[13, "psyplot_gui.help_explorer.UrlBrowser.browse"]], "browse() (psyplot_gui.help_explorer.urlhelp method)": [[13, "psyplot_gui.help_explorer.UrlHelp.browse"]], "bt_ahead (psyplot_gui.help_explorer.urlbrowser attribute)": [[13, "psyplot_gui.help_explorer.UrlBrowser.bt_ahead"]], "bt_back (psyplot_gui.help_explorer.urlbrowser attribute)": [[13, "psyplot_gui.help_explorer.UrlBrowser.bt_back"]], "bt_lock (psyplot_gui.help_explorer.urlbrowser attribute)": [[13, "psyplot_gui.help_explorer.UrlBrowser.bt_lock"]], "bt_lock_default (psyplot_gui.help_explorer.urlbrowser attribute)": [[13, "psyplot_gui.help_explorer.UrlBrowser.bt_lock_default"]], "bt_refresh (psyplot_gui.help_explorer.urlbrowser attribute)": [[13, "psyplot_gui.help_explorer.UrlBrowser.bt_refresh"]], "bt_url_lock (psyplot_gui.help_explorer.urlbrowser attribute)": [[13, "psyplot_gui.help_explorer.UrlBrowser.bt_url_lock"]], "bt_url_lock_default (psyplot_gui.help_explorer.urlbrowser attribute)": [[13, "psyplot_gui.help_explorer.UrlBrowser.bt_url_lock_default"]], "bt_url_menus (psyplot_gui.help_explorer.urlhelp attribute)": [[13, "psyplot_gui.help_explorer.UrlHelp.bt_url_menus"]], "button_box (psyplot_gui.help_explorer.urlbrowser attribute)": [[13, "psyplot_gui.help_explorer.UrlBrowser.button_box"]], "can_document_object (psyplot_gui.help_explorer.helpmixin attribute)": [[13, "psyplot_gui.help_explorer.HelpMixin.can_document_object"]], "can_document_object (psyplot_gui.help_explorer.urlhelp attribute)": [[13, "psyplot_gui.help_explorer.UrlHelp.can_document_object"]], "can_show_rst (psyplot_gui.help_explorer.helpmixin attribute)": [[13, "psyplot_gui.help_explorer.HelpMixin.can_show_rst"]], "can_show_rst (psyplot_gui.help_explorer.urlhelp attribute)": [[13, "psyplot_gui.help_explorer.UrlHelp.can_show_rst"]], "close() (psyplot_gui.help_explorer.helpexplorer method)": [[13, "psyplot_gui.help_explorer.HelpExplorer.close"]], "close() (psyplot_gui.help_explorer.urlhelp method)": [[13, "psyplot_gui.help_explorer.UrlHelp.close"]], "completed (psyplot_gui.help_explorer.urlbrowser property)": [[13, "psyplot_gui.help_explorer.UrlBrowser.completed"]], "default_url (psyplot_gui.help_explorer.urlbrowser attribute)": [[13, "psyplot_gui.help_explorer.UrlBrowser.default_url"]], "describe_object() (psyplot_gui.help_explorer.helpmixin method)": [[13, "psyplot_gui.help_explorer.HelpMixin.describe_object"]], "describe_object() (psyplot_gui.help_explorer.urlhelp method)": [[13, "psyplot_gui.help_explorer.UrlHelp.describe_object"]], "doc_urls (psyplot_gui.help_explorer.urlbrowser attribute)": [[13, "psyplot_gui.help_explorer.UrlBrowser.doc_urls"]], "editor (psyplot_gui.help_explorer.texthelp attribute)": [[13, "psyplot_gui.help_explorer.TextHelp.editor"]], "file2html() (in module psyplot_gui.help_explorer)": [[13, "psyplot_gui.help_explorer.file2html"]], "get_doc() (psyplot_gui.help_explorer.helpmixin method)": [[13, "psyplot_gui.help_explorer.HelpMixin.get_doc"]], "get_doc() (psyplot_gui.help_explorer.urlhelp method)": [[13, "psyplot_gui.help_explorer.UrlHelp.get_doc"]], "get_objtype() (psyplot_gui.help_explorer.urlhelp method)": [[13, "psyplot_gui.help_explorer.UrlHelp.get_objtype"]], "header() (psyplot_gui.help_explorer.helpmixin method)": [[13, "psyplot_gui.help_explorer.HelpMixin.header"]], "header() (psyplot_gui.help_explorer.urlhelp method)": [[13, "psyplot_gui.help_explorer.UrlHelp.header"]], "html (psyplot_gui.help_explorer.urlbrowser attribute)": [[13, "psyplot_gui.help_explorer.UrlBrowser.html"]], "html2file() (in module psyplot_gui.help_explorer)": [[13, "psyplot_gui.help_explorer.html2file"]], "html_error (psyplot_gui.help_explorer.sphinxthread attribute)": [[13, "psyplot_gui.help_explorer.SphinxThread.html_error"]], "html_ready (psyplot_gui.help_explorer.sphinxthread attribute)": [[13, "psyplot_gui.help_explorer.SphinxThread.html_ready"]], "is_importable() (psyplot_gui.help_explorer.urlhelp method)": [[13, "psyplot_gui.help_explorer.UrlHelp.is_importable"]], "keypressevent() (psyplot_gui.help_explorer.urlcombo method)": [[13, "psyplot_gui.help_explorer.UrlCombo.keyPressEvent"]], "object_descriptor (psyplot_gui.help_explorer.helpmixin attribute)": [[13, 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(psyplot_gui.preferences.rcparamstree attribute)": [[16, "psyplot_gui.preferences.RcParamsTree.value_col"]], "psyplot_gui.sphinx_supp": [[17, "module-psyplot_gui.sphinx_supp"]], "link_aliases() (in module psyplot_gui.sphinx_supp.conf)": [[18, "psyplot_gui.sphinx_supp.conf.link_aliases"]], "psyplot_gui.sphinx_supp.conf": [[18, "module-psyplot_gui.sphinx_supp.conf"]], "setup() (in module psyplot_gui.sphinx_supp.conf)": [[18, "psyplot_gui.sphinx_supp.conf.setup"]]}}) \ No newline at end of file diff --git a/setup.py b/setup.py deleted file mode 100644 index 3049cc2..0000000 --- a/setup.py +++ /dev/null @@ -1,12 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: CC0-1.0 - -"""Setup script for the psyplot-gui package.""" -import versioneer -from setuptools import setup - -setup( - version=versioneer.get_version(), - cmdclass=versioneer.get_cmdclass(), -) diff --git a/tests/_base_testing.py b/tests/_base_testing.py deleted file mode 100644 index 60c8715..0000000 --- a/tests/_base_testing.py +++ /dev/null @@ -1,116 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -# -*- coding: utf-8 -*- -"""Module defining the base class for the gui test""" -import os -import os.path as osp -import unittest - -from psyplot import rcParams as psy_rcParams -from psyplot.config import setup_logging - -from psyplot_gui import rcParams -from psyplot_gui.compat.qtcompat import QApplication - -os.environ["PSYPLOT_PLUGINS"] = ( - "yes:psyplot_gui_test.plugin::" "yes:psy_simple.plugin" -) - - -test_dir = osp.dirname(__file__) -setup_logging(osp.join(test_dir, "logging.yml"), env_key="") - - -def is_running_in_gui(): - from psyplot_gui.main import mainwindow - - return mainwindow is not None - - -running_in_gui = is_running_in_gui() - - -on_travis = os.environ.get("TRAVIS") - - -def setup_rcparams(): - rcParams.defaultParams["console.start_channels"][0] = False - rcParams.defaultParams["main.listen_to_port"][0] = False - rcParams.defaultParams["help_explorer.render_docs_parallel"][0] = False - rcParams.defaultParams["help_explorer.use_intersphinx"][0] = False - rcParams.defaultParams["plugins.include"][0] = ["psyplot_gui_test.plugin"] - rcParams.defaultParams["plugins.exclude"][0] = "all" - rcParams.update_from_defaultParams() - - -if running_in_gui: - app = QApplication.instance() -else: - setup_rcparams() - app = QApplication([]) - app.setQuitOnLastWindowClosed(False) - - -class PsyPlotGuiTestCase(unittest.TestCase): - """A base class for testing the psyplot_gui module - - At the initializzation of the TestCase, a new - :class:`psyplot_gui.main.MainWindow` widget is created which is closed at - the end of all the tests""" - - @classmethod - def setUpClass(cls): - from psyplot_gui.main import mainwindow - - cls._close_app = mainwindow is None - cls._app = app - if not running_in_gui: - import psyplot_gui - - psyplot_gui.UNIT_TESTING = True - - @classmethod - def tearDownClass(cls): - del cls._app - - def setUp(self): - import psyplot_gui.main as main - - if not running_in_gui: - setup_rcparams() - self.window = main.MainWindow.run(show=False) - else: - self.window = main.mainwindow - - def tearDown(self): - import matplotlib.pyplot as plt - import psyplot.project as psy - - if not running_in_gui: - import psyplot_gui.main as main - - self.window.close() - rcParams.update_from_defaultParams() - psy_rcParams.update_from_defaultParams() - rcParams.disconnect() - psy_rcParams.disconnect() - main._set_mainwindow(None) - del self.window - psy.close("all") - plt.close("all") - - def get_file(self, fname): - """Get the path to the file `fname` - - Parameters - ---------- - fname: str - The path of the file name (relative to the test directory) - - Returns - ------- - str - The complete path to the given file""" - return osp.join(test_dir, fname) diff --git a/tests/conftest.py b/tests/conftest.py deleted file mode 100644 index 4b1139f..0000000 --- a/tests/conftest.py +++ /dev/null @@ -1,84 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -"""Configuration module for running tests with pytest - -We use a methodology inspired by -https://nvbn.github.io/2017/02/02/pytest-leaking/ -to show huw many MB are leaked from each test.""" -import os -from collections import namedtuple -from itertools import groupby - -from psutil import Process - -_proc = Process(os.getpid()) - - -def get_consumed_ram(): - return _proc.memory_info().rss - - -def pytest_addoption(parser): - group = parser.getgroup("psyplot", "psyplot specific options") - group.addoption( - "--leak-threshold", - help="Threshold for leak report", - default=20, - type=int, - ) - group.addoption( - "--sort-leaks", - help="Sort the leaking report in ascending order", - action="store_true", - ) - - -def pytest_configure(config): - global LEAK_LIMIT, SORT_LEAKS - LEAK_LIMIT = config.getoption("leak_threshold") * 1024 * 1024 - SORT_LEAKS = config.getoption("sort_leaks") - - -START = "START" -END = "END" -ConsumedRamLogEntry = namedtuple( - "ConsumedRamLogEntry", ("nodeid", "on", "consumed_ram") -) -consumed_ram_log = [] - - -def pytest_runtest_setup(item): - log_entry = ConsumedRamLogEntry(item.nodeid, START, get_consumed_ram()) - consumed_ram_log.append(log_entry) - - -def pytest_runtest_teardown(item): - log_entry = ConsumedRamLogEntry(item.nodeid, END, get_consumed_ram()) - consumed_ram_log.append(log_entry) - - -# display leaks greater than 20 MB -LEAK_LIMIT = 20 * 1024 * 1024 - -SORT_LEAKS = False - - -def pytest_terminal_summary(terminalreporter): - grouped = groupby(consumed_ram_log, lambda entry: entry.nodeid) - leaks = [] - for nodeid, (start_entry, end_entry) in grouped: - leaked = end_entry.consumed_ram - start_entry.consumed_ram - if leaked > LEAK_LIMIT: - leaks.append( - ( - leaked // 1024 // 1024, - nodeid, - end_entry.consumed_ram // 1024 // 1024, - ) - ) - if SORT_LEAKS: - leaks.sort() - for t in leaks: - terminalreporter.write("LEAKED %s MB in %s. Total: %s MB\n" % t) diff --git a/tests/dummy_module.py b/tests/dummy_module.py deleted file mode 100644 index 526b5e1..0000000 --- a/tests/dummy_module.py +++ /dev/null @@ -1,53 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -"""Dummy module - -Just a dummy module for documentation testing purposes""" - - -class DummyClass(object): - """I am a test class for docs""" - - #: A dummy class attribute that will be replaced by an instance attribute - a = None - - def __init__(self, a=None): - """ - Parameters - ---------- - a: object - anything""" - self.a = a - - def __call__(self, a=None): - """ - Parameters - ---------- - a: object - anything else""" - self.a = a - - def dummy_method(self, a=None): - """A dummy instance method - - Parameters - ---------- - a: object - any dummy value""" - self.a = a - - -def dummy_func(a=None): - """A dummy test function - - Parameters - ---------- - a: object - I don't care""" - pass - - -#: :class:`int`. A dummy module level attribute -a = 1 diff --git a/tests/logging.yml b/tests/logging.yml deleted file mode 100755 index a4e2d52..0000000 --- a/tests/logging.yml +++ /dev/null @@ -1,86 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - ---- -# debug logging settings for the psyplot_gui test suite - -version: 1 - -disable_existing_loggers: False - -formatters: - - simple: - - format: "[%(name)s] - %(levelname)s - %(message)s" - - level_message: - - format: "%(levelname)s: %(message)s" - - full: - format: "%(asctime)s - [%(name)s.%(funcName)s] - %(levelname)s - %(message)s" - - -handlers: - - console: - - class: logging.StreamHandler - - level: INFO - - formatter: simple - - stream: ext://sys.stdout - - warning_console: - - class: logging.StreamHandler - - level: INFO - - formatter: level_message - - stream: ext://sys.stdout - - - debug_file_handler: - - class: logging.handlers.RotatingFileHandler - - mode: w - - level: DEBUG - - formatter: full - - filename: debug_psyplot.log - - maxBytes: 10485760 # 10MB - - backupCount: 5 - - encoding: utf8 - - delay: True - -loggers: - - psyplot_gui: - - handlers: [console, debug_file_handler] - - propagate: False - - level: DEBUG - - psyplot: - - handlers: [console, debug_file_handler] - - propagate: False - - level: DEBUG -... diff --git a/tests/test-t2m-u-v.nc b/tests/test-t2m-u-v.nc deleted file mode 100644 index 7594faf..0000000 Binary files a/tests/test-t2m-u-v.nc and /dev/null differ diff --git a/tests/test-t2m-u-v.nc.license b/tests/test-t2m-u-v.nc.license deleted file mode 100644 index 5183f02..0000000 --- a/tests/test-t2m-u-v.nc.license +++ /dev/null @@ -1,3 +0,0 @@ -SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH - -SPDX-License-Identifier: LGPL-3.0-only diff --git a/tests/test_console.py b/tests/test_console.py deleted file mode 100644 index 2720a84..0000000 --- a/tests/test_console.py +++ /dev/null @@ -1,134 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -# -*- coding: utf-8 -*- -"""Skript to test the InProcessShell that is used in the psyplot gui""" -import inspect -import re -import unittest - -import _base_testing as bt -import psyplot.project as psy -import six - -from psyplot_gui.compat.qtcompat import QTest, with_qt5 - -travis_qt_msg = "Does not work on Travis with Qt4" - - -class ConsoleTest(bt.PsyPlotGuiTestCase): - """A testcase to test the InProcess IPython console of the psyplot GUI""" - - def setUp(self): - import psyplot_gui.console - - # XXX HACK: Set the _with_prompt attribute to False to tell the - # ConsoleWidget to use the _prompt_cursor - psyplot_gui.console._with_prompt = False - super(ConsoleTest, self).setUp() - - def tearDown(self): - import psyplot_gui.console - - # XXX HACK: Set the _with_prompt attribute to True again to tell the - # ConsoleWidget to use the _prompt_cursor - psyplot_gui.console._with_prompt = True - super(ConsoleTest, self).tearDown() - - def insert_text(self, text): - """Convenience method to insert a single line into the console""" - c = self.window.console - return c._insert_plain_text(c._get_prompt_cursor(), text) - - def _test_object_docu(self, symbol): - """Tests whether the documentation of :class:`object` can be displayed - - Parameters - ---------- - symbol: {'?', '('} - The symbol to use for displaying the doc - - See Also - -------- - test_questionmark, test_bracketleft - """ - from psyplot_gui.help_explorer import signature - - c = self.window.console - he = self.window.help_explorer - he.set_viewer("Plain text") - # we insert the text here otherwise using console _insert_plain_text - # method because apparently the text is not inserted when using - # QTest.keyClicks - self.insert_text("object") - QTest.keyClicks(c._control, symbol) - sig = ( - "" - if six.PY2 - else re.sub( - r"^\(\s*self,\s*", "(", str(signature(object.__init__)) - ) - ) - header = "object" + sig - bars = "=" * len(header) - self.assertEqual( - he.viewer.editor.toPlainText(), - "\n".join( - [ - bars, - header, - bars + "\n\n", - inspect.getdoc(object), - "\n" + inspect.getdoc(object.__init__), - ] - ), - ) - - @unittest.skipIf(bt.on_travis and not with_qt5, travis_qt_msg) - def test_questionmark(self): - """Test the connection to the help explorer by typing '?'""" - self._test_object_docu("?") - - @unittest.skipIf(bt.on_travis and not with_qt5, travis_qt_msg) - def test_bracketleft(self): - """Test the connection to the help explorer by typing '?'""" - self._test_object_docu("(") - - @unittest.skipIf(bt.on_travis and not with_qt5, travis_qt_msg) - def test_current_object(self): - """Test whether the current object is given correctly""" - c = self.window.console - self.insert_text("print(test.anything(object") - self.assertEqual(c.get_current_object(True), "object") - try: # qtconsole >4.3 uses the _prompt_cursor attribute - cursor = c._prompt_cursor - except AttributeError: - cursor = c._control.textCursor() - curr = cursor.position() - self.insert_text(") + 3") - cursor.setPosition(curr) - self.assertEqual(c.get_current_object(), "object") - - def test_command(self): - self.window.console.run_command_in_shell("a = 4") - self.assertEqual(self.window.console.get_obj("a")[1], 4) - - def test_mp_sp(self): - """Test whether the mp and sp variables are set correctly""" - from xarray import DataArray - - psy.Project.oncpchange.emit(psy.gcp(True)) - psy.Project.oncpchange.emit(psy.gcp()) - self.assertIs(self.window.console.get_obj("mp")[1], psy.gcp(True)) - self.assertIs(self.window.console.get_obj("sp")[1], psy.gcp()) - sp = psy.plot.lineplot(DataArray([1, 2, 3], name="test").to_dataset()) - self.assertIs(self.window.console.get_obj("mp")[1], psy.gcp(True)) - self.assertIs(self.window.console.get_obj("sp")[1], sp) - sp.close(True, True) - self.assertIs(self.window.console.get_obj("mp")[1], psy.gcp(True)) - self.assertIs(self.window.console.get_obj("sp")[1], psy.gcp()) - - -if __name__ == "__main__": - unittest.main() diff --git a/tests/test_dataframeeditor.py b/tests/test_dataframeeditor.py deleted file mode 100644 index 558c854..0000000 --- a/tests/test_dataframeeditor.py +++ /dev/null @@ -1,292 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -# -*- coding: utf-8 -*- -"""Test module for the :mod:`psyplot_gui.dataframeeditor` module""" -import sys -import unittest - -import _base_testing as bt -import numpy as np -import pandas as pd -import six -from pandas.testing import assert_frame_equal - -from psyplot_gui.compat.qtcompat import QApplication, Qt - -if six.PY2: - try: - import CStringIO as io - except ImportError: - import StringIO as io -else: - import io - - -def df_equals(df, df_ref, *args, **kwargs): - """Simple wrapper around assert_frame_equal to use unittests assertion - - Parameters - ---------- - df: pd.DataFrame - The simulation data frame - df_ref: pd.DataFrame - The reference data frame - - Returns - ------- - None or Exception - Either None if everything went fine, otherwise the raised Exception""" - try: - assert_frame_equal(df, df_ref, *args, **kwargs) - except Exception as e: - return e - - -class DataFrameEditorTest(bt.PsyPlotGuiTestCase): - #: The :class:`psyplot_gui.dataframeeditor.DataFrameEditor` - editor = None - - @property - def table(self): - return self.editor.table - - @property - def model(self): - return self.table.model() - - def setUp(self): - super(DataFrameEditorTest, self).setUp() - self.editor = self.window.new_data_frame_editor() - - def tearDown(self): - self.editor = None - - def test_dtypes(self): - df = pd.DataFrame( - [ - [True, "bool"], - [1 + 1j, "complex"], - ["test", "string"], - [1.11, "float"], - [1, "int"], - [np.random.rand(3, 3), "Unkown type"], - ["áéí", "unicode"], - ], - index=["a", "b", np.nan, np.nan, np.nan, "c", "d"], - columns=[np.nan, "Type"], - ) - self.editor.set_df(df) - self.assertIs(self.table.model().df, df) - - def test_multiindex(self): - """Test the handling of DataFrames with MultiIndex""" - df = pd.DataFrame([[1, 2, 3], [4, 5, 6]], columns=list("abc")) - self.editor.set_df(df) - self.assertTrue(self.model.index_editable) - self.assertTrue(self.editor.cb_index_editable.isChecked()) - - table = self.table - table.selectColumn(1) - table.set_index_action.trigger() - self.assertEqual(list(df.index.names), ["a"]) - self.assertTrue(self.model.index_editable) - self.assertTrue(self.editor.cb_index_editable.isChecked()) - - table.selectColumn(2) - table.append_index_action.trigger() - self.assertEqual(list(df.index.names), ["a", "b"]) - self.assertFalse(self.model.index_editable) - self.assertFalse(self.editor.cb_index_editable.isChecked()) - table.selectColumn(1) - table.set_index_action.trigger() - self.assertEqual(list(df.index.names), ["index"]) - self.assertEqual(list(df.columns), list("abc")) - self.assertTrue(self.model.index_editable) - self.assertTrue(self.editor.cb_index_editable.isChecked()) - - def test_sort(self): - """Test the sorting""" - df = pd.DataFrame( - [[4, 5, 6 + 1j], [1, object, 3]], columns=list("abc") - ) - self.editor.set_df(df) - self.assertTrue(self.model.sort(1, return_check=True)) - self.assertEqual(list(df.index.values), [1, 0]) - self.assertTrue(self.model.sort(0, return_check=True)) - self.assertEqual(list(df.index.values), [0, 1]) - - # test complex numbers - self.assertTrue( - self.model.sort(3, Qt.AscendingOrder, return_check=True) - ) - self.assertEqual(list(df["c"].values), [3 + 0j, 6 + 1j]) - self.assertTrue( - self.model.sort(3, Qt.DescendingOrder, return_check=True) - ) - self.assertEqual(list(df["c"].values), [6 + 1j, 3 + 0j]) - - # sorting is not enabled - self.table.sortByColumn(1) - self.assertEqual(list(df["a"]), [4, 1]) - - # enable sorting - self.table.setSortingEnabled(True) - self.table.header_class.setSortIndicator(1, Qt.AscendingOrder) - self.table.sortByColumn(1) - self.assertEqual(list(df["a"]), [1, 4]) - self.table.header_class.setSortIndicator(1, Qt.DescendingOrder) - self.table.sortByColumn(1) - self.assertEqual(list(df["a"]), [4, 1]) - - @unittest.expectedFailure - def test_sort_failure(self): - df = pd.DataFrame( - [[4, 5, 6 + 1j], [1, object, 3]], columns=list("abc") - ) - self.editor.set_df(df) - - # test false sorting - if not six.PY2: - self.assertFalse(self.model.sort(2, return_check=True)) - - @unittest.expectedFailure - def test_sort_failure_2(self): - df = pd.DataFrame( - [[4, 5, 6 + 1j], [1, object, 3]], columns=list("abc") - ) - self.editor.set_df(df) - - # test a column that cannot be sorted - self.table.setSortingEnabled(True) - self.table.sortByColumn(2) - - def test_edit(self): - """Test the editing of the editor""" - - df = pd.DataFrame([[1, 2, 3], [4, 5, 6]], columns=list("abc")) - self.editor.set_df(df) - - table = self.table - - # edit a regular cell - table.selectRow(0) - idx = table.selectedIndexes()[2] # first row, second column - self.model.setData(idx, 4) - self.assertEqual(df.iloc[0, 1], 4) - - # now edit the index - table.selectRow(1) - idx = table.selectedIndexes()[0] # first row, second column - self.model.setData(idx, 6) - self.assertEqual(df.index[1], 6) - - # now we change a data type - table.selectColumn(2) - table.dtype_actions["To float"].trigger() - self.assertIs(df.dtypes["b"], np.array(5.4).dtype) - - def test_large_df(self): - df = pd.DataFrame(np.zeros((int(1e6), 100))) - self.editor.set_df(df) - model = self.model - self.assertLess(model.rows_loaded, df.shape[0]) - self.assertLess(model.cols_loaded, df.shape[1]) - self.assertEqual((model.total_rows, model.total_cols), df.shape) - self.assertTrue(model.can_fetch_more(rows=True, columns=True)) - old_rows, old_cols = model.rows_loaded, model.cols_loaded - self.table.load_more_data( - self.table.verticalScrollBar().maximum(), rows=True - ) - self.table.load_more_data( - self.table.horizontalScrollBar().maximum(), columns=True - ) - self.assertGreater(model.rows_loaded, old_rows) - self.assertGreater(model.cols_loaded, old_cols) - self.assertLess(model.rows_loaded, df.shape[0]) - self.assertLess(model.cols_loaded, df.shape[1]) - - def test_insert_rows_above(self): - df = pd.DataFrame([[1, 2, 3], [4, 5, 6]], columns=list("abc")) - self.editor.set_df(df) - - # insert one row - self.table.selectRow(1) - self.table.insert_row_above_action.trigger() - self.assertEqual(df.shape, (3, 3)) - self.assertEqual(list(df.index), [0, 0, 1]) - self.assertTrue( - np.isnan(df.iloc[1, :].values).all(), msg=str(df.iloc[1, :]) - ) - - # insert two rows - self.model.insertRows(2, 2) - self.assertEqual(df.shape, (5, 3)) - self.assertEqual(list(df.index), [0, 0, 0, 0, 1]) - self.assertTrue( - np.isnan(df.iloc[2:-1, :].values).all(), msg=str(df.iloc[2:-1, :]) - ) - - def test_insert_rows_below(self): - df = pd.DataFrame([[1, 2, 3], [4, 5, 6]], columns=list("abc")) - self.editor.set_df(df) - - # insert one row - self.table.selectRow(1) - self.table.insert_row_below_action.trigger() - self.assertEqual(df.shape, (3, 3)) - self.assertEqual(list(df.index), [0, 1, 1]) - self.assertTrue( - np.isnan(df.iloc[2, :].values).all(), msg=str(df.iloc[2, :]) - ) - - # insert two rows - self.model.insertRows(3, 2) - self.assertEqual(df.shape, (5, 3)) - self.assertEqual(list(df.index), [0, 1, 1, 1, 1]) - self.assertTrue( - np.isnan(df.iloc[-2:, :].values).all(), msg=str(df.iloc[-2:, :]) - ) - - def test_copy(self): - df = pd.DataFrame([[1, 2, 3], [4, 5, 6]], columns=list("abc")) - self.editor.set_df(df) - self.table.selectAll() - self.table.copy() - clipboard = QApplication.clipboard() - stream = io.StringIO(clipboard.text()) - - df2 = pd.read_csv(stream, delim_whitespace=True) - self.assertIsNone(df_equals(df2, df)) - - self.table.selectColumn(1) - self.table.copy() - stream = io.StringIO(clipboard.text()) - arr = np.loadtxt(stream) - self.assertEqual(arr.tolist(), [1, 4]) - - @unittest.skipIf( - sys.platform == "win32", - "Avoid potential troubles with temporary csv files.", - ) - def test_open_dataframe(self): - """Test the opening of a dataframe""" - from tempfile import NamedTemporaryFile - - df = pd.DataFrame([[1, 2, 3], [4, 5, 6]], columns=list("abc")) - self.editor.open_dataframe(df) - self.editor.open_dataframe("") - f = NamedTemporaryFile(suffix=".csv") - df.to_csv(f.name, index=False) - self.editor.open_dataframe(f.name) - self.assertIsNone(df_equals(self.model.df, df)) - - @unittest.expectedFailure - def test_open_nonexistent(self): - self.editor.open_dataframe("NONEXISTENT.csv") - self.assertIsNone(self.model.df) - - def test_close(self): - self.editor.close() - self.assertFalse(self.window.dataframeeditors) diff --git a/tests/test_dependencies.py b/tests/test_dependencies.py deleted file mode 100644 index d364265..0000000 --- a/tests/test_dependencies.py +++ /dev/null @@ -1,47 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -# -*- coding: utf-8 -*- -"""Script to test the :mod:`psyplot_gui.dependencies` module""" -import unittest - -import _base_testing as bt -import numpy as np -import psyplot -import yaml - -import psyplot_gui -from psyplot_gui.compat.qtcompat import QLabel - - -class TestDependencies(bt.PsyPlotGuiTestCase): - """Test the :class:`psyplot_gui.preferences.Preferences` widget""" - - def setUp(self): - super(TestDependencies, self).setUp() - self.window.show_dependencies() - self.deps = self.window.dependencies - - def tearDown(self): - # make sure the preferences widget is closed completely - self.deps.close() - del self.deps - super(TestDependencies, self).tearDown() - - def test_widget(self): - """Test whether the tree is filled correctly""" - deps = self.deps - label = QLabel("", parent=self.window) - deps.tree.selectAll() - deps.copy_selected(label) - d = yaml.load(str(label.text()), Loader=yaml.Loader) - self.assertEqual(d["psyplot"], psyplot.__version__) - self.assertEqual(d["psyplot_gui"], psyplot_gui.__version__) - self.assertIn("numpy", d) - self.assertEqual(d["numpy"], np.__version__) - label.close() - - -if __name__ == "__main__": - unittest.main() diff --git a/tests/test_fmt_widget.py b/tests/test_fmt_widget.py deleted file mode 100644 index 557e01f..0000000 --- a/tests/test_fmt_widget.py +++ /dev/null @@ -1,179 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -"""Test module for the psyplot_gui.fmt_widget module""" -import _base_testing as bt -import yaml - -from psyplot_gui.compat.qtcompat import ( - QPushButton, - Qt, - QtCore, - QTest, - QtGui, - with_qt5, -) - -if with_qt5: - ClearAndSelect = QtCore.QItemSelectionModel.ClearAndSelect -else: - ClearAndSelect = QtGui.QItemSelectionModel.ClearAndSelect - - -class FormatoptionWidgetTest(bt.PsyPlotGuiTestCase): - """Test case for the :class:`psyplot_gui.fmt_widget.FormatoptionWidget`""" - - @property - def fmt_widget(self): - return self.window.fmt_widget - - def setUp(self): - import psyplot.project as psy - - super(FormatoptionWidgetTest, self).setUp() - self.project = psy.plot.gui_test_plotter( - self.get_file("test-t2m-u-v.nc"), name="t2m" - ) - - def tearDown(self): - import psyplot.project as psy - - super(FormatoptionWidgetTest, self).tearDown() - psy.close("all") - del self.project - - def test_fmto_groups(self): - """Test whether the group combo is filled correctly""" - fmt_w = self.fmt_widget - # test groups - self.assertEqual( - list( - map( - fmt_w.group_combo.itemText, - range(fmt_w.group_combo.count()), - ) - ), - [ - "Dimensions", - "All formatoptions", - "Miscallaneous formatoptions", - "Post processing formatoptions", - ], - ) - - def test_dims(self): - """Test whether the fmto combo for dimensions is filled correctly""" - fmt_w = self.fmt_widget - # test groups - self.assertEqual( - list( - map(fmt_w.fmt_combo.itemText, range(fmt_w.fmt_combo.count())) - ), - list(self.project[0].psy.base["t2m"].dims), - ) - - def test_dim_widget(self): - """Test the :class:`psyplot_gui.fmt_widget.DimensionsWidget`""" - fmt_w = self.fmt_widget - fmt_w.clear_text() - self.assertTrue(fmt_w.dim_widget.isVisible()) - fmt_w.dim_widget.coord_combo.load_coord() - model = fmt_w.dim_widget.coord_combo.model() - selection_model = fmt_w.dim_widget.coord_combo.view().selectionModel() - item = model.item(2) - selection_model.select(model.indexFromItem(item), ClearAndSelect) - fmt_w.dim_widget.insert_from_combo() - self.assertEqual(fmt_w.get_text(), "[1]") - # select a second item - item = model.item(3) - selection_model.select(model.indexFromItem(item), ClearAndSelect) - fmt_w.dim_widget.insert_from_combo() - self.assertEqual(fmt_w.get_text(), "[1, 2]") - - # change to single selection - fmt_w.dim_widget.set_single_selection(True) - fmt_w.dim_widget.insert_from_combo() - self.assertEqual(fmt_w.get_text(), "2") - - def test_fmtos(self): - """Test whether the fmto combo for formatoptions is filled correctly""" - fmt_w = self.fmt_widget - fmt_w.group_combo.setCurrentIndex( - fmt_w.group_combo.findText("Miscallaneous formatoptions") - ) - # test groups - self.assertEqual( - list( - map(fmt_w.fmt_combo.itemText, range(fmt_w.fmt_combo.count())) - ), - ["Test formatoption (fmt1)", "Second test formatoption (fmt2)"], - ) - - def test_toggle_multiline(self): - """Test toggle the multiline text editor""" - fmt_w = self.fmt_widget - self.assertTrue(fmt_w.line_edit.isVisible()) - self.assertFalse(fmt_w.text_edit.isVisible()) - fmt_w.set_obj("test") - self.assertEqual(fmt_w.line_edit.text()[1:-1], "test") - - # now toggle the button - QTest.mouseClick(fmt_w.multiline_button, Qt.LeftButton) - self.assertFalse(fmt_w.line_edit.isVisible()) - self.assertTrue(fmt_w.text_edit.isVisible()) - self.assertEqual(fmt_w.text_edit.toPlainText()[1:-1], "test") - fmt_w.insert_obj("test") - self.assertEqual(fmt_w.text_edit.toPlainText()[1:-1], "testtest") - - # and toggle again - QTest.mouseClick(fmt_w.multiline_button, Qt.LeftButton) - self.assertTrue(fmt_w.line_edit.isVisible()) - self.assertFalse(fmt_w.text_edit.isVisible()) - self.assertEqual(fmt_w.line_edit.text()[1:-1], "testtest") - - def test_run_code(self): - """Test updating the plot""" - fmt_w = self.fmt_widget - self.assertTrue(fmt_w.yaml_cb.isChecked()) - fmt_w.group_combo.setCurrentIndex( - fmt_w.group_combo.findText("Miscallaneous formatoptions") - ) - fmt_w.set_obj("test") - QTest.keyClick(fmt_w.line_edit, Qt.Key_Return) - self.assertEqual(self.project.plotters[0].fmt1.value, "test") - - # test python code - fmt_w.fmt_combo.setCurrentIndex(1) - fmt_w.yaml_cb.setChecked(False) - fmt_w.set_obj("second test") - QTest.mouseClick(fmt_w.run_button, Qt.LeftButton) - self.assertEqual(self.project.plotters[0].fmt2.value, "second test") - - def test_fmt_widget(self): - """Test the :meth:`psyplot.plotter.Formatoption.get_fmt_widget` method""" - fmt_w = self.fmt_widget - self.assertIs(fmt_w.fmt_widget, fmt_w.dim_widget) - fmt_w.group_combo.setCurrentIndex( - fmt_w.group_combo.findText("Miscallaneous formatoptions") - ) - self.assertIsInstance(fmt_w.fmt_widget, QPushButton) - self.assertFalse(yaml.load(fmt_w.line_edit.text(), Loader=yaml.Loader)) - fmt_w.line_edit.setText("") - QTest.mouseClick(fmt_w.fmt_widget, Qt.LeftButton) - self.assertEqual(fmt_w.line_edit.text()[1:-1], "Test") - # test with objects other than string - fmt_w.fmt_combo.setCurrentIndex(1) - self.assertIsInstance(fmt_w.fmt_widget, QPushButton) - fmt_w.clear_text() - QTest.mouseClick(fmt_w.fmt_widget, Qt.LeftButton) - self.assertEqual(fmt_w.line_edit.text(), "2") - - # check without yaml - fmt_w.yaml_cb.setChecked(False) - QTest.mouseClick(fmt_w.fmt_widget, Qt.LeftButton) - self.assertEqual(fmt_w.line_edit.text(), "22") - - def test_get_obj(self): - self.fmt_widget.line_edit.setText('{"okay": True}') - self.assertEqual(self.fmt_widget.get_obj(), {"okay": True}) diff --git a/tests/test_help_explorer.py b/tests/test_help_explorer.py deleted file mode 100644 index 7c06b59..0000000 --- a/tests/test_help_explorer.py +++ /dev/null @@ -1,287 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -"""Module for testing the components of the -:class:`psyplot_gui.help_explorer.HelpExplorer` class""" -import inspect -import os.path as osp -import unittest - -import _base_testing as bt -import dummy_module as d - -from psyplot_gui import rcParams -from psyplot_gui.compat.qtcompat import Qt, QTest, asstring -from psyplot_gui.help_explorer import ( - HelpExplorer, - UrlHelp, - _viewers, - html2file, -) - - -class UrlHelpTestMixin(bt.PsyPlotGuiTestCase): - """Convenience class for UrlHelp tests""" - - @classmethod - def setUpClass(cls): - super(UrlHelpTestMixin, cls).setUpClass() - cls._original_intersphinx = rcParams["help_explorer.use_intersphinx"] - rcParams["help_explorer.use_intersphinx"] = False - # we render the docs in the same process to avoid problems with - # signals not being send and time problems - cls._original_pdocs = rcParams["help_explorer.render_docs_parallel"] - rcParams["help_explorer.render_docs_parallel"] = False - - @classmethod - def tearDownClass(cls): - super(UrlHelpTestMixin, cls).tearDownClass() - rcParams["help_explorer.use_intersphinx"] = cls._original_intersphinx - rcParams["help_explorer.render_docs_parallel"] = cls._original_pdocs - - def setUp(self): - super(UrlHelpTestMixin, self).setUp() - self.help_explorer.set_viewer("HTML help") - - @property - def help_explorer(self): - return self.window.help_explorer - - @property - def viewer(self): - ret = self.help_explorer.viewer - self.assertIs(ret, self.help_explorer.viewers["HTML help"]) - return ret - - def _test_if_sphinx_worked(self, oname): - html = osp.join( - osp.join(self.viewer.sphinx_dir, "_build", "html", oname + ".html") - ) - self.assertEqual(html2file(self.viewer.html.url().toString()), html) - # we emit the urlChanged signal manually because it is not emitted - # without main loop - self.viewer.html.urlChanged.emit(self.viewer.html.url()) - self.assertEqual(self.viewer.tb_url.currentText(), oname) - - def _test_browsing(self): - rcParams["help_explorer.online"] = True - self.viewer.browse("www.google.de") - url = asstring(self.viewer.html.url().toString()) - self.assertTrue( - url.startswith("https://www.google.de"), msg="Wrong url " + url - ) - - def _test_object_docu(self, obj, oname): - """Test whether an html help of a python object can be shown""" - self.help_explorer.show_help(obj, oname) - fname = osp.join(self.viewer.sphinx_dir, oname + ".rst") - self.assertTrue(osp.exists(fname), msg=fname + " is not existent!") - self._test_if_sphinx_worked(oname) - - -class UrlHelpTest(UrlHelpTestMixin): - """Test the :class:`psyplot_gui.help_explorer.UrlHelp`""" - - def test_browsing(self): - """Test browsing""" - self._test_browsing() - - def test_show_rst(self): - """Test whether the showing of an rst string is working""" - s = """ - That's a test - ============= - - Just a dummy string""" - self.help_explorer.show_rst(s, "test") - fname = osp.join(self.viewer.sphinx_dir, "test.rst") - self.assertTrue(osp.exists(fname), msg=fname + " is not existent!") - self._test_if_sphinx_worked("test") - - def test_module_doc(self): - """Test whether the sphinx rendering works for a module""" - self._test_object_docu(d, "dummy_module") - - def test_class_doc(self): - """Test whether the sphinx rendering works for a class""" - self._test_object_docu(d.DummyClass, "d.DummyClass") - - def test_func_doc(self): - """Test whether the sphinx rendering works for a class""" - self._test_object_docu(d.dummy_func, "d.dummy_func") - - def test_method_doc(self): - """Test whether the sphinx rendering works for a method""" - self._test_object_docu( - d.DummyClass.dummy_method, "d.DummyClass.dummy_method" - ) - ini = d.DummyClass() - self._test_object_docu(ini.dummy_method, "ini.dummy_method") - - def test_instance_doc(self): - """Test whether the sphinx rendering works for a instance of a class""" - ini = d.DummyClass() - self._test_object_docu(ini, "ini") - - -# XXX Not yet working XXX -# def test_classattr_doc(self): -# """Test whether the sphinx rendering works for a method""" -# ini = d.DummyClass(2) -# self._test_object_docu(ini.a, 'ini.a') -# -# def test_moduleattr_doc(self): -# """Test whether the sphinx rendering works for a method""" -# self._test_object_docu(d.a, 'd.a') - - -class BrowserTest(UrlHelpTestMixin): - """Testcase for the :class:`psyplot_gui.help_explorer.UrlBrowser` class""" - - def setUp(self): - super(BrowserTest, self).setUp() - self._help = viewer = UrlHelp(parent=self.window.help_explorer) - self.window.help_explorer.viewers["HTML help"] = viewer - self.window.help_explorer.set_viewer(viewer) - - def tearDown(self): - self._help.close(force=True) - super(BrowserTest, self).tearDown() - - def test_added_url(self): - """Test to add an url on the top""" - - def check_google(): - combo.add_text_on_top("https://www.google.com/", block=True) - self.assertEqual(combo.itemText(0), "https://www.google.com/") - - combo = self.viewer.tb_url - current = combo.itemText(0) - check_google() - combo.insertItem(0, "test") - check_google() - self.assertEqual(combo.itemText(1), "test") - self.assertEqual(combo.itemText(2), current) - - def test_lock(self): - """Test the url lock""" - url = self.viewer.html.url().toString() - QTest.mouseClick(self.viewer.bt_lock, Qt.LeftButton) - self.help_explorer.show_help(int, "int") - fname = osp.join(self.viewer.sphinx_dir, "int.rst") - self.assertFalse(osp.exists(fname), msg=fname + " exists wrongly!") - self.help_explorer.show_rst(int.__doc__, "int") - self.assertFalse(osp.exists(fname), msg=fname + " exists wrongly!") - self.viewer.browse("www.google.de") - self.assertEqual(self.viewer.html.url().toString(), url) - - def test_url_lock(self): - """Test whether to object documentation works""" - self._test_browsing() - QTest.mouseClick(self.viewer.bt_url_lock, Qt.LeftButton) - self.help_explorer.show_help(int, "int") - self._test_object_docu(int, "int") - self.viewer.browse("www.unil.ch") - self._test_object_docu(int, "int") - - -class TextHelpTest(bt.PsyPlotGuiTestCase): - """Testcase for the :class:`psyplot_gui.help_explorer.TextHelp` class""" - - def setUp(self): - super(TextHelpTest, self).setUp() - self.help_explorer.set_viewer("Plain text") - - @property - def help_explorer(self): - return self.window.help_explorer - - @property - def viewer(self): - return self.help_explorer.viewer - - def _test_doc(self, doc, oname, obj=None): - """Test whether an the documentation is shown correctly - - Notes - ----- - May be improved in the future for a more exact test""" - self.assertTrue( - doc in self.viewer.editor.toPlainText(), - msg="%s was not documented!\nObject docu: %s\nHelp test: %s" - % (oname, doc, self.viewer.editor.toPlainText()), - ) - - def _test_object_docu(self, obj, oname, doc=None): - """Test whether an help of a python object can be shown""" - self.help_explorer.show_help(obj, oname) - if doc is None: - doc = inspect.getdoc(obj) - self._test_doc(doc, oname, obj) - - def test_show_rst(self): - """Test whether the showing of an rst string is working""" - s = """ - That's a test - ============= - - Just a dummy string""" - self.help_explorer.show_rst(s, "test") - self._test_doc(s, "test") - - def test_module_doc(self): - """Test whether the sphinx rendering works for a module""" - self._test_object_docu(d, "dummy_module") - - def test_class_doc(self): - """Test whether the sphinx rendering works for a class""" - self._test_object_docu(d.DummyClass, "d.DummyClass") - - def test_func_doc(self): - """Test whether the sphinx rendering works for a class""" - self._test_object_docu(d.dummy_func, "d.dummy_func") - - def test_method_doc(self): - """Test whether the sphinx rendering works for a method""" - self._test_object_docu( - d.DummyClass.dummy_method, "d.DummyClass.dummy_method" - ) - ini = d.DummyClass() - self._test_object_docu(ini.dummy_method, "ini.dummy_method") - - def test_instance_doc(self): - """Test whether the sphinx rendering works for a instance of a class""" - ini = d.DummyClass() - self._test_object_docu(ini, "ini") - - -class NoHTMLTest(TextHelpTest): - """Test running without the HTML viewer""" - - @classmethod - def setUpClass(cls): - super().setUpClass() - rcParams["help_explorer.use_webengineview"] = False - del HelpExplorer.viewers["HTML help"] - cls._orig_viewers = _viewers.copy() - _viewers.clear() - - def setUp(self): - super(TextHelpTest, self).setUp() - - @classmethod - def tearDownClass(cls): - rcParams["help_explorer.use_webengineview"] = True - HelpExplorer.viewers["HTML help"] = UrlHelp - for key, val in cls._orig_viewers.items(): - _viewers[key] = val - super().tearDownClass() - - def test_no_html(self): - """Test if the HTML help has been removed""" - self.assertNotIn("HTML help", self.help_explorer.viewers) - - -if __name__ == "__main__": - unittest.main() diff --git a/tests/test_main.py b/tests/test_main.py deleted file mode 100644 index cd09fae..0000000 --- a/tests/test_main.py +++ /dev/null @@ -1,48 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -"""Test utilities for the :mod:`psyplot_gui.main` module -""" -import unittest - -import _base_testing as bt - - -class TestMainWindow(bt.PsyPlotGuiTestCase): - def test_plugin(self): - from psyplot_gui.main import mainwindow - - try: - from psyplot_gui_test.plugin import W1, W2 - except ImportError: - self.skipTest("Test plugin not installed") - self.assertIn("psyplot_gui_test.plugin:W1:w1", mainwindow.plugins) - self.assertIn("psyplot_gui_test.plugin:W2:w2", mainwindow.plugins) - self.assertIsInstance( - mainwindow.plugins["psyplot_gui_test.plugin:W1:w1"], W1 - ) - self.assertIsInstance( - mainwindow.plugins["psyplot_gui_test.plugin:W2:w2"], W2 - ) - w = mainwindow.plugins["psyplot_gui_test.plugin:W2:w2"] - a = w.dock.toggleViewAction() - # the plugin should be hidden - self.assertFalse(a.isChecked()) - w.show_plugin() - self.assertTrue(a.isChecked()) - - def test_central_widget(self): - """Test changing the central widget""" - self.window.set_central_widget("help_explorer") - self.assertIs(self.window.centralWidget(), self.window.help_explorer) - self.window.set_central_widget(self.window.figures_tree) - self.assertIs(self.window.centralWidget(), self.window.figures_tree) - - def test_remove_plugin(self): - self.window.plugins["psyplot_gui_test.plugin:W1:w1"].remove_plugin() - self.assertNotIn("psyplot_gui_test.plugin:W1:w1", self.window.plugins) - - -if __name__ == "__main__": - unittest.main() diff --git a/tests/test_plot_creator.py b/tests/test_plot_creator.py deleted file mode 100644 index e5adc10..0000000 --- a/tests/test_plot_creator.py +++ /dev/null @@ -1,480 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -# -*- coding: utf-8 -*- -"""Skript to test the InProcessShell that is used in the psyplot gui""" -import sys -import unittest -from itertools import chain - -import _base_testing as bt -import psyplot.project as psy -import six - -from psyplot_gui.compat.qtcompat import ( - QStyleOptionViewItem, - Qt, - QtCore, - QTest, - QtGui, - QValidator, - QWidget, - asstring, -) - - -def get_col_num(ax): - try: - return ax.get_subplotspec().colspan.start - except AttributeError: # matplotlib<3.2 - return ax.colNum - - -def get_row_num(ax): - try: - return ax.get_subplotspec().rowspan.start - except AttributeError: # matplotlib<3.2 - return ax.rowNum - - -class PlotCreatorTest(bt.PsyPlotGuiTestCase): - """Tests concerning the plot creator""" - - def setUp(self): - super(PlotCreatorTest, self).setUp() - self.window.new_plots() - self.pc = self.window.plot_creator - - def tearDown(self): - if getattr(self.pc, "ds", None) is not None: - self.pc.ds.close() - # make sure the plot creator is closed completely - self.pc.close() - del self.pc - super(PlotCreatorTest, self).tearDown() - - def test_load_external_file(self): - """Test whether an external netCDF file can be loaded""" - fname = self.get_file("test-t2m-u-v.nc") - self.pc.open_dataset([fname]) - vtab = self.pc.variables_table - ds = psy.open_dataset(fname) - self.assertIn(fname, self.pc.ds_combo.currentText()) - self.assertEqual( - { - asstring(vtab.item(irow, 0).text()) - for irow in range(vtab.rowCount()) - }, - set(ds.variables) - set(ds.coords), - ) - ds.close() - - def test_load_from_console(self): - """Test whether a dataset can be loaded that is defined in the - console""" - fname = self.get_file("test-t2m-u-v.nc") - if sys.platform == "win32": - fname = fname.replace("\\", "\\\\") - self.window.console.execute("ds = psy.open_dataset('%s')" % fname) - vtab = self.pc.variables_table - ds = psy.open_dataset(self.get_file("test-t2m-u-v.nc")) - self.pc.bt_get_ds.get_from_shell("ds") - self.assertIn("ds", self.pc.ds_combo.currentText()) - self.assertEqual( - { - asstring(vtab.item(irow, 0).text()) - for irow in range(vtab.rowCount()) - }, - set(ds.variables) - set(ds.coords), - ) - ds.close() - self.window.console.execute("ds.close()") - - def test_plusplus(self): - """Test the add all button""" - # loag a dataset - self.test_load_external_file() - QTest.mouseClick(self.pc.bt_add_all, Qt.LeftButton) - atab = self.pc.array_table - vtab = self.pc.variables_table - self.assertEqual( - [ - asstring(atab.item(irow, 0).text()) - for irow in range(atab.rowCount()) - ], - [ - asstring(vtab.item(irow, 0).text()) - for irow in range(vtab.rowCount()) - ], - ) - - def test_minusminus(self): - """Test the remove all button""" - self.test_plusplus() - QTest.mouseClick(self.pc.bt_remove_all, Qt.LeftButton) - self.assertEqual(self.pc.array_table.rowCount(), 0) - - def test_plus(self): - """Test the add button""" - self.test_load_external_file() - vtab = self.pc.variables_table - atab = self.pc.array_table - nvar = vtab.rowCount() - rows = [nvar - 2, nvar - 1] - for row in rows: - vtab.item(row, 0).setSelected(True) - QTest.mouseClick(self.pc.bt_add, Qt.LeftButton) - self.assertEqual( - [ - asstring(atab.item(irow, 0).text()) - for irow in range(atab.rowCount()) - ], - [asstring(vtab.item(irow, 0).text()) for irow in rows], - ) - - def test_minus(self): - """Test the minus button""" - self.test_plusplus() - vtab = self.pc.variables_table - atab = self.pc.array_table - nvar = atab.rowCount() - rows = [nvar - 2, nvar - 1] - for row in rows: - atab.item(row, 0).setSelected(True) - QTest.mouseClick(self.pc.bt_remove, Qt.LeftButton) - variables = [ - asstring(vtab.item(row, 0).text()) - for row in range(vtab.rowCount()) - if row not in rows - ] - self.assertEqual( - [ - asstring(atab.item(irow, 0).text()) - for irow in range(atab.rowCount()) - ], - variables, - ) - - def test_update_with_dims(self): - """Test the update with the given dimensions""" - self.test_plusplus() - atab = self.pc.array_table - atab.selectAll() - atab.update_selected(dims={"time": "3"}) - icol = len(atab.desc_cols) + atab.dims.index("time") - vars3d = { - var - for var, varo in atab.get_ds().variables.items() - if "time" in varo.dims - } - for irow in range(atab.rowCount()): - vname = atab.item(irow, atab.var_col).text() - if vname in vars3d: - item = atab.item(irow, icol) - self.assertEqual( - item.text(), - "3", - msg="Wrong time value %s in row %s" % (item.text(), irow), - ) - - def test_add_subplots(self): - """Test the add subplots button""" - from math import ceil - - import matplotlib.pyplot as plt - - self.test_load_external_file() - self.test_plusplus() - self.pc.cols_axis_edit.setText("2") - self.pc.rows_axis_edit.setText("2") - self.pc.max_axis_edit.setText("3") - QTest.mouseClick(self.pc.bt_add_axes, Qt.LeftButton) - nvar = self.pc.array_table.rowCount() - nfigs = int(ceil(nvar / 3.0)) - # create the subplots - axes = self.pc.array_table.axes - self.assertEqual([ax.get_gridspec().ncols for ax in axes], [2] * nvar) - self.assertEqual([ax.get_gridspec().nrows for ax in axes], [2] * nvar) - rows = [0, 0, 1] * nfigs - cols = [0, 1, 0] * nfigs - self.assertEqual([get_row_num(ax) for ax in axes], rows) - self.assertEqual([get_col_num(ax) for ax in axes], cols) - fig_nums = list(chain(*([i] * 3 for i in range(1, nfigs + 1)))) - self.assertEqual([ax.get_figure().number for ax in axes], fig_nums) - plt.close("all") - - def test_add_single_subplots(self): - """Test the add single subplot button""" - import matplotlib.pyplot as plt - - self.test_load_external_file() - self.test_plusplus() - self.pc.cols_axis_edit.setText("2") - self.pc.rows_axis_edit.setText("2") - self.pc.row_axis_edit.setText("1") - self.pc.col_axis_edit.setText("2") - self.pc.array_table.selectAll() - QTest.mouseClick(self.pc.bt_add_single_axes, Qt.LeftButton) - nvar = self.pc.array_table.rowCount() - # create the subplots - axes = self.pc.array_table.axes - # test rows, cols and figure numbers - self.assertEqual([ax.get_gridspec().ncols for ax in axes], [2] * nvar) - self.assertEqual([ax.get_gridspec().nrows for ax in axes], [2] * nvar) - self.assertEqual([get_row_num(ax) for ax in axes], [0] * nvar) - self.assertEqual([get_col_num(ax) for ax in axes], [1] * nvar) - self.assertEqual( - [ax.get_figure().number for ax in axes], list(range(1, nvar + 1)) - ) - plt.close("all") - - def test_axescreator_subplots(self): - """Test the :class:`psyplot_gui.plot_creator.SubplotCreator`""" - import matplotlib.pyplot as plt - - from psyplot_gui.plot_creator import AxesCreatorCollection - - # load dataset - self.test_load_external_file() - # create arrays - self.test_plusplus() - # use all items - atab = self.pc.array_table - items = [atab.item(i, atab.axes_col) for i in range(atab.rowCount())] - # create the widget to select the subplots - ac = AxesCreatorCollection("subplot") - w = ac.tb.currentWidget() - w.fig_edit.setText("") - w.cols_edit.setText("2") - w.rows_edit.setText("2") - w.num1_edit.setText("2") - w.num2_edit.setText("2") - ac.okpressed.connect(lambda it: atab._change_axes(items, it)) - QTest.mouseClick(ac.bt_ok, Qt.LeftButton) - nvar = self.pc.array_table.rowCount() - # create the subplots - axes = self.pc.array_table.axes - # test rows, cols and figure numbers - self.assertEqual([ax.get_gridspec().ncols for ax in axes], [2] * nvar) - self.assertEqual([ax.get_gridspec().nrows for ax in axes], [2] * nvar) - self.assertEqual([get_row_num(ax) for ax in axes], [0] * nvar) - self.assertEqual([get_col_num(ax) for ax in axes], [1] * nvar) - self.assertEqual( - [ax.get_figure().number for ax in axes], list(range(1, nvar + 1)) - ) - # close figures - plt.close("all") - - def test_axescreator_axes(self): - """Test the :class:`psyplot_gui.plot_creator.AxesCreator`""" - import matplotlib.pyplot as plt - - from psyplot_gui.plot_creator import AxesCreatorCollection - - # load dataset - self.test_load_external_file() - # create arrays - self.test_plusplus() - # use all items - atab = self.pc.array_table - items = [atab.item(i, atab.axes_col) for i in range(atab.rowCount())] - # create the widget to select the subplots - ac = AxesCreatorCollection("axes") - w = ac.tb.currentWidget() - w.fig_edit.setText("") - w.x0_edit.setText("0.3") - w.y0_edit.setText("0.4") - w.x1_edit.setText("0.7") - w.y1_edit.setText("0.8") - ac.okpressed.connect(lambda it: atab._change_axes(items, it)) - QTest.mouseClick(ac.bt_ok, Qt.LeftButton) - nvar = self.pc.array_table.rowCount() - # create the subplots - axes = self.pc.array_table.axes - boxes = [ax.get_position() for ax in axes] - # test rows, cols and figure numbers - self.assertEqual([box.x0 for box in boxes], [0.3] * nvar) - self.assertEqual([box.y0 for box in boxes], [0.4] * nvar) - self.assertEqual([box.x1 for box in boxes], [0.7] * nvar) - self.assertEqual([box.y1 for box in boxes], [0.8] * nvar) - self.assertEqual( - [ax.get_figure().number for ax in axes], list(range(1, nvar + 1)) - ) - # close figures - plt.close("all") - - def test_axescreator_select(self): - """Test the :class:`psyplot_gui.plot_creator.AxesSelector`""" - import matplotlib.pyplot as plt - import numpy as np - from matplotlib.backend_bases import MouseEvent, PickEvent - - from psyplot_gui.plot_creator import AxesCreatorCollection - - # load dataset - self.test_load_external_file() - # create arrays - self.test_plusplus() - # use all items - atab = self.pc.array_table - items = [atab.item(i, atab.axes_col) for i in range(2)] - # create the widget to select the subplots - ax1 = plt.axes([0.3, 0.4, 0.6, 0.3]) - plt.figure() - ax2 = plt.subplot(211) - ac = AxesCreatorCollection("choose") - w = ac.tb.currentWidget() - fig = ax1.get_figure() - mouseevent1 = MouseEvent( - "button_release_event", - fig.canvas, - *np.mean(ax1.get_position().get_points().T, axis=1), - ) - w.get_picked_ax(PickEvent("pick", fig.canvas, mouseevent1, artist=ax1)) - fig = ax2.get_figure() - mouseevent2 = MouseEvent( - "button_release_event", - ax2.get_figure().canvas, - *np.mean(ax2.get_position().get_points().T, axis=1), - ) - w.get_picked_ax(PickEvent("pick", fig.canvas, mouseevent2, artist=ax2)) - - ac.okpressed.connect(lambda it: atab._change_axes(items, it)) - QTest.mouseClick(ac.bt_ok, Qt.LeftButton) - # create the subplots - axes = self.pc.array_table.axes - # check them - self.assertIs(axes[0], ax1) - self.assertIs(axes[1], ax2) - # close figures - plt.close("all") - - def test_arrayname_validator(self): - """Test the :class:`psyplot_gui.plot_creator.ArrayNameValidator`""" - # open dataset - fname = self.get_file("test-t2m-u-v.nc") - ds = psy.open_dataset(fname) - self.pc.bt_get_ds.get_from_shell(ds) - - # add data arrays - QTest.mouseClick(self.pc.bt_add_all, Qt.LeftButton) - - # get names - atab = self.pc.array_table - names = atab.current_names - - # get itemdelegate - item_delegate = atab.itemDelegateForColumn(atab.arr_col) - - # create editor and validator - widget = QWidget() - option = QStyleOptionViewItem() - index = atab.indexFromItem(atab.item(0, atab.arr_col)) - editor = item_delegate.createEditor(widget, option, index) - validator = editor.validator() - - # check validation - self.assertEqual( - validator.validate(names[1], len(names[1]))[0], - validator.Intermediate, - ) - self.assertEqual( - validator.validate("dummy", 5)[0], validator.Acceptable - ) - self.assertNotIn(validator.fixup(names[1]), names) - ds.close() - - def test_variablename_validator(self): - """Test the :class:`psyplot_gui.plot_creator.VariableItemDelegate`""" - # open dataset - try: - from psyplot_gui.compat.qtcompat import QString - except ImportError: - QString = six.text_type - fname = self.get_file("test-t2m-u-v.nc") - ds = psy.open_dataset(fname) - self.pc.bt_get_ds.get_from_shell(ds) - - # add data arrays - QTest.mouseClick(self.pc.bt_add_all, Qt.LeftButton) - - # get names - atab = self.pc.array_table - names = sorted(list(set(ds.variables).difference(ds.coords))) - - # get itemdelegate - item_delegate = atab.itemDelegateForColumn(atab.var_col) - - # create editor and validator - widget = QWidget() - option = QStyleOptionViewItem() - index = atab.indexFromItem(atab.item(0, atab.arr_col)) - editor = item_delegate.createEditor(widget, option, index) - validator = editor.validator() - - # check validation - self.assertEqual( - validator.validate(QString("dummy"), 5)[0], QValidator.Invalid - ) - self.assertEqual( - validator.validate(QString(names[0]), len(names[0]))[0], - QValidator.Acceptable, - ) - self.assertEqual( - validator.validate(QString(names[0])[:2], 2)[0], - QValidator.Intermediate, - ) - s = atab.sep.join(names) - self.assertEqual( - validator.validate(QString(s), len(s))[0], QValidator.Acceptable - ) - self.assertEqual( - validator.validate(QString(s[:3] + "dummy" + s[3:]), len(s) + 5)[ - 0 - ], - QValidator.Invalid, - ) - ds.close() - - def test_drag_drop(self): - """Test the drag and drop of the - :class:`psyplot_gui.plot_creator.ArrayTable`""" - self.pc.show() - # XXX Try to use directly the dropEvent method by setting the source of - # the event! - point = QtCore.QPoint(0, 0) - data = QtCore.QMimeData() - event = QtGui.QDropEvent( - point, - Qt.MoveAction, - data, - Qt.LeftButton, - Qt.NoModifier, - QtCore.QEvent.Drop, - ) - - # open dataset - fname = self.get_file("test-t2m-u-v.nc") - ds = psy.open_dataset(fname) - self.pc.bt_get_ds.get_from_shell(ds) - - # add data arrays - QTest.mouseClick(self.pc.bt_add_all, Qt.LeftButton) - - # move rows - atab = self.pc.array_table - old = list(atab.arr_names_dict.items()) - atab.selectRow(2) - atab.dropOn(event) - resorted = [old[i] for i in [2, 0, 1] + list(range(3, len(old)))] - self.assertEqual( - list(atab.arr_names_dict.items()), - resorted, - msg="Rows not moved correctly!", - ) - ds.close() - - -if __name__ == "__main__": - unittest.main() diff --git a/tests/test_plugin/psyplot_gui_test/__init__.py b/tests/test_plugin/psyplot_gui_test/__init__.py deleted file mode 100644 index e69de29..0000000 diff --git a/tests/test_plugin/psyplot_gui_test/plotter.py b/tests/test_plugin/psyplot_gui_test/plotter.py deleted file mode 100644 index 7c852bd..0000000 --- a/tests/test_plugin/psyplot_gui_test/plotter.py +++ /dev/null @@ -1,47 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -# Test module that defines a plotter -# -# The plotter in this module has been registered by the rcParams in the plugin -# package -from psyplot.plotter import Formatoption, Plotter - - -class TestFmt(Formatoption): - """Some documentation""" - - default = None - - name = "Test formatoption" - - def get_fmt_widget(self, parent, project): - """Get the formatoption widget to update this formatoption in the GUI""" - from psyplot_gui.compat.qtcompat import QPushButton - - button = QPushButton("Test", parent) - button.clicked.connect(lambda: parent.insert_obj(button.text())) - return button - - def update(self, value): - pass - - -class TestFmt2(TestFmt): - """Another formatoption to the different types of get_fmt_widget""" - - name = "Second test formatoption" - - def get_fmt_widget(self, parent, project): - """Get the formatoption widget to update this formatoption in the GUI""" - from psyplot_gui.compat.qtcompat import QPushButton - - button = QPushButton("Test", parent) - button.clicked.connect(lambda: parent.insert_obj(2)) - return button - - -class TestPlotter(Plotter): - fmt1 = TestFmt("fmt1") - fmt2 = TestFmt2("fmt2") diff --git a/tests/test_plugin/psyplot_gui_test/plugin.py b/tests/test_plugin/psyplot_gui_test/plugin.py deleted file mode 100644 index 9801e1c..0000000 --- a/tests/test_plugin/psyplot_gui_test/plugin.py +++ /dev/null @@ -1,37 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -from psyplot.config.rcsetup import RcParams, validate_bool, validate_dict - -from psyplot_gui.common import DockMixin -from psyplot_gui.compat.qtcompat import Qt, QWidget - - -class W1(QWidget, DockMixin): - title = "w1" - dock_position = Qt.LeftDockWidgetArea - - -class W2(QWidget, DockMixin): - title = "w2" - dock_position = Qt.BottomDockWidgetArea - hidden = True - - -rcParams = RcParams( - defaultParams={ - "test_plugin": [True, validate_bool], - "project.plotters": [ - { - "gui_test_plotter": { - "module": "psyplot_gui_test.plotter", - "plotter_name": "TestPlotter", - "import_plotter": True, - } - }, - validate_dict, - ], - } -) -rcParams.update_from_defaultParams() diff --git a/tests/test_plugin/setup.py b/tests/test_plugin/setup.py deleted file mode 100644 index 7fec53e..0000000 --- a/tests/test_plugin/setup.py +++ /dev/null @@ -1,20 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -from setuptools import find_packages, setup - -setup( - name="psyplot_gui_test", - version="1.0.0", - license="GPLv2", - packages=find_packages(exclude=["docs", "tests*", "examples"]), - entry_points={ - "psyplot_gui": [ - "w1=psyplot_gui_test.plugin:W1", - "w2=psyplot_gui_test.plugin:W2", - ], - "psyplot": ["plugin=psyplot_gui_test.plugin"], - }, - zip_safe=False, -) diff --git a/tests/test_preferences.py b/tests/test_preferences.py deleted file mode 100644 index 27fc4e8..0000000 --- a/tests/test_preferences.py +++ /dev/null @@ -1,332 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -# -*- coding: utf-8 -*- -"""Script to test the :mod:`psyplot_gui.preferences` module""" -import os -import os.path as osp -import shutil -import tempfile -import unittest -from itertools import islice - -import _base_testing as bt -import yaml -from psyplot import rcParams as psy_rcParams - -import psyplot_gui.preferences as prefs -from psyplot_gui import rcParams as gui_rcParams -from psyplot_gui.compat.qtcompat import QDialogButtonBox, Qt, QTest, asstring -from psyplot_gui.config.rcsetup import GuiRcParams - - -class TestRcParamsWidget(bt.PsyPlotGuiTestCase): - """Test the :class:`psyplot_gui.preferences.RcParamsWidget` class""" - - _created_files = set() - - def setUp(self): - super(TestRcParamsWidget, self).setUp() - self._created_files = set() - - def tearDown(self): - super(TestRcParamsWidget, self).tearDown() - for f in self._created_files: - if osp.exists(f) and osp.isdir(f): - shutil.rmtree(f) - elif osp.exists(f): - os.remove(f) - self._created_files.clear() - - def test_loading(self): - """Test whether the rcParams are loaded correctly""" - # create the preferences window - w = prefs.GuiRcParamsWidget() - w.initialize() - items = list(w.tree.top_level_items) - self.assertEqual(len(items), len(gui_rcParams)) - # test keys - keys = set(gui_rcParams) - for item in items: - keys.remove(asstring(item.text(0))) - self.assertFalse(keys) - - # test values - for item in items: - key = asstring(item.text(0)) - s_val = asstring(w.tree.itemWidget(item.child(0), 2).toPlainText()) - val = yaml.load(s_val, Loader=yaml.Loader) - self.assertEqual( - val, gui_rcParams[key], msg="Failed item %s: %s" % (key, s_val) - ) - - def test_changing(self): - """Test whether the changes are displayed correctly""" - w = prefs.GuiRcParamsWidget() - gui_rcParams["console.auto_set_mp"] = True - w.initialize() - items = list(w.tree.top_level_items) - for item in items: - if item.text(0) == "console.auto_set_mp": - iw = w.tree.itemWidget(item.child(0), 2) - iw.setPlainText("f") - QTest.mouseClick(w.bt_select_changed, Qt.LeftButton) - selected_rc = dict(w.tree.selected_rc()) - self.assertEqual(len(selected_rc), 1, msg=selected_rc) - self.assertIn("console.auto_set_mp", selected_rc) - self.assertEqual(selected_rc["console.auto_set_mp"], False) - - for item in items: - if item.text(0) == "console.auto_set_mp": - iw = w.tree.itemWidget(item.child(0), 2) - iw.setPlainText("t") - - QTest.mouseClick(w.bt_select_none, Qt.LeftButton) - self.assertFalse(dict(w.tree.selected_rc())) - - QTest.mouseClick(w.bt_select_changed, Qt.LeftButton) - self.assertFalse(w.tree.selectedItems()) - - def test_validation(self): - """Test whether the validation works correctly""" - self.window.showMaximized() - w = prefs.GuiRcParamsWidget() - w.initialize() - - # choose an item - for i, item in enumerate(w.tree.top_level_items): - if asstring(item.text(0)) == "console.auto_set_mp": - break - - self.assertTrue(w.is_valid, msg=w.tree.valid) - # set an invalid value - w.tree.itemWidget(item.child(0), 2).setPlainText("tg") - self.assertFalse(w.tree.valid[i]) - self.assertFalse(w.is_valid) - w.tree.itemWidget(item.child(0), 2).setPlainText("t") - self.assertTrue(w.tree.valid[i]) - self.assertTrue(w.is_valid) - - # set a value that cannot be loaded by yaml - w.tree.itemWidget(item.child(0), 2).setPlainText('"t') - self.assertFalse(w.tree.valid[i]) - self.assertFalse(w.is_valid) - - def test_save_01_all(self): - """Test saving the rcParams""" - w = prefs.GuiRcParamsWidget() - w.initialize() - - QTest.mouseClick(w.bt_select_all, Qt.LeftButton) - self.assertEqual(len(w.tree.selectedItems()), len(gui_rcParams)) - - fname = tempfile.NamedTemporaryFile( - prefix="psyplot_gui_test", suffix=".yml" - ).name - self._created_files.add(fname) - action = w.save_settings_action(target=fname) - action.trigger() - self.assertTrue(osp.exists(fname)) - rc = GuiRcParams(defaultParams=gui_rcParams.defaultParams) - rc.load_from_file(fname) - - self.assertEqual(rc, gui_rcParams) - - def test_save_02_some(self): - """Test saving some parts the rcParams""" - w = prefs.GuiRcParamsWidget() - w.initialize() - - keys = [] - - for item in islice(w.tree.top_level_items, 0, None, 2): - item.setSelected(True) - keys.append(asstring(item.text(0))) - - self.assertEqual(len(w.tree.selectedItems()), len(keys)) - - fname = tempfile.NamedTemporaryFile( - prefix="psyplot_gui_test", suffix=".yml" - ).name - self._created_files.add(fname) - action = w.save_settings_action(target=fname) - action.trigger() - self.assertTrue(osp.exists(fname)) - rc = GuiRcParams(defaultParams=gui_rcParams.defaultParams) - rc.load_from_file(fname) - - self.assertEqual(dict(rc), {key: gui_rcParams[key] for key in keys}) - - def test_update(self): - """Test updating the rcParams""" - w = prefs.GuiRcParamsWidget() - w.initialize() - - fname = tempfile.NamedTemporaryFile( - prefix="psyplot_gui_test", suffix=".yml" - ).name - self._created_files.add(fname) - gui_rcParams.find_all("console").dump(fname) - - keys = [] - - for item in w.tree.top_level_items: - if asstring(item.text(0)).startswith("help_explorer"): - item.setSelected(True) - keys.append(asstring(item.text(0))) - - self.assertEqual(len(w.tree.selectedItems()), len(keys)) - - action = w.save_settings_action(update=True, target=fname) - action.trigger() - self.assertTrue(osp.exists(fname)) - rc = GuiRcParams(defaultParams=gui_rcParams.defaultParams) - rc.load_from_file(fname) - - self.assertEqual( - dict(rc), - { - key: gui_rcParams[key] - for key in gui_rcParams - if key.startswith("console") or key.startswith("help_explorer") - }, - ) - - -class TestPreferences(bt.PsyPlotGuiTestCase): - """Test the :class:`psyplot_gui.preferences.Preferences` widget""" - - def setUp(self): - super(TestPreferences, self).setUp() - self.window.edit_preferences() - self.prefs = self.window.preferences - - def tearDown(self): - # make sure the preferences widget is closed completely - self.prefs.close() - del self.prefs - super(TestPreferences, self).tearDown() - - def test_pages(self): - """Test whether all pages are loaded""" - pref_w = self.prefs - pages = list(pref_w.pages) - self.assertTrue(pages) - self.assertTrue( - any(isinstance(p, prefs.GuiRcParamsWidget) for p in pages), - msg=pages, - ) - self.assertTrue( - any(isinstance(p, prefs.PsyRcParamsWidget) for p in pages), - msg=pages, - ) - - def test_apply(self): - """Test the apply button""" - pref_w = self.prefs - i, cp = next( - t - for t in enumerate(pref_w.pages) - if isinstance(t[1], prefs.GuiRcParamsWidget) - ) - pref_w.set_current_index(i) - self.assertIsInstance(pref_w.get_page(), prefs.GuiRcParamsWidget) - self.assertFalse(pref_w.bt_apply.isEnabled()) - - # change a value - current = gui_rcParams["console.auto_set_mp"] - for item in cp.tree.top_level_items: - if item.text(0) == "console.auto_set_mp": - break - cp.tree.itemWidget(item.child(0), 2).setPlainText( - yaml.dump(not current) - ) - self.assertTrue(pref_w.bt_apply.isEnabled()) - - QTest.mouseClick(pref_w.bt_apply, Qt.LeftButton) - self.assertEqual(gui_rcParams["console.auto_set_mp"], not current) - self.assertFalse(pref_w.bt_apply.isEnabled()) - - # change the value and the page - cp.tree.itemWidget(item.child(0), 2).setPlainText(yaml.dump(current)) - self.assertTrue(pref_w.bt_apply.isEnabled()) - j, cp2 = next( - t - for t in enumerate(pref_w.pages) - if isinstance(t[1], prefs.PsyRcParamsWidget) - ) - pref_w.set_current_index(j) - self.assertIsInstance(pref_w.get_page(), prefs.PsyRcParamsWidget) - self.assertFalse(pref_w.bt_apply.isEnabled()) - pref_w.set_current_index(i) - self.assertTrue(pref_w.bt_apply.isEnabled()) - - def test_ok(self): - """Test the apply button""" - pref_w = self.prefs - i, cp = next( - t - for t in enumerate(pref_w.pages) - if isinstance(t[1], prefs.GuiRcParamsWidget) - ) - pref_w.set_current_index(i) - self.assertIsInstance(pref_w.get_page(), prefs.GuiRcParamsWidget) - self.assertFalse(pref_w.bt_apply.isEnabled()) - - # change a value - current = gui_rcParams["console.auto_set_mp"] - for item in cp.tree.top_level_items: - if item.text(0) == "console.auto_set_mp": - break - cp.tree.itemWidget(item.child(0), 2).setPlainText( - yaml.dump(not current) - ) - self.assertTrue(pref_w.bt_apply.isEnabled()) - - # change a value in the PsyRcParamsWidget - i, cp = next( - t - for t in enumerate(pref_w.pages) - if isinstance(t[1], prefs.PsyRcParamsWidget) - ) - pref_w.set_current_index(i) - self.assertIsInstance(pref_w.get_page(), prefs.PsyRcParamsWidget) - self.assertFalse(pref_w.bt_apply.isEnabled()) - - # change a value - for item in cp.tree.top_level_items: - if item.text(0) == "decoder.x": - break - cp.tree.itemWidget(item.child(0), 2).setPlainText(yaml.dump({"test"})) - self.assertTrue(pref_w.bt_apply.isEnabled()) - - QTest.mouseClick( - pref_w.bbox.button(QDialogButtonBox.Ok), Qt.LeftButton - ) - self.assertEqual(gui_rcParams["console.auto_set_mp"], not current) - self.assertEqual(psy_rcParams["decoder.x"], {"test"}) - - def test_plugin_pages(self): - try: - from psyplot_gui_test.plugin import rcParams - except ImportError: - self.skipTest("psyplot_gui_test not installed") - pref_w = self.prefs - QTest.mouseClick(pref_w.bt_load_plugins, Qt.LeftButton) - i, cp = next( - t - for t in enumerate(pref_w.pages) - if isinstance(t[1], prefs.RcParamsWidget) - and not isinstance(t[1], prefs.PsyRcParamsWidget) - and "test_plugin" - in (item.text(0) for item in t[1].tree.top_level_items) - ) - pref_w.set_current_index(i) - self.assertEqual( - len(list(cp.tree.top_level_items)), len(rcParams), msg=cp - ) - - -if __name__ == "__main__": - unittest.main() diff --git a/tests/test_project_content.py b/tests/test_project_content.py deleted file mode 100644 index f156eec..0000000 --- a/tests/test_project_content.py +++ /dev/null @@ -1,352 +0,0 @@ -# SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -# -# SPDX-License-Identifier: LGPL-3.0-only - -import os.path as osp -import unittest - -# -*- coding: utf-8 -*- -from collections import defaultdict - -import _base_testing as bt -import psyplot.data as psyd -import psyplot.project as psy -import xarray as xr - -from psyplot_gui.compat.qtcompat import QDialogButtonBox, Qt, QTest, asstring - - -class ProjectContentTest(bt.PsyPlotGuiTestCase): - """Test case for testing whether the project content part is updated - correctly""" - - @property - def project_content(self): - return self.window.project_content - - @property - def content_widget(self): - return self.project_content.content_widget - - def get_list(self, key): - return self.content_widget.lists[key] - - def _selected_rows(self, name): - return list( - map(lambda ind: ind.row(), self.get_list(name).selectedIndexes()) - ) - - def test_content_update(self): - """Test whether the list is updated correctly""" - w = self.content_widget - lists = w.lists - # currently it should be empty - self.assertEqual(w.count(), 1) - self.assertEqual(w.indexOf(lists["All"]), 0) - self.assertFalse(w.isItemEnabled(0), msg='List "All" is enabled!') - - # create some plots - sp = psy.plot.plot2d(self.get_file("test-t2m-u-v.nc"), name="t2m") - sp2 = psy.plot.lineplot( - self.get_file("test-t2m-u-v.nc"), name="t2m", t=0, x=0, y=0 - ) - d = defaultdict(lambda: 1) - d["All"] = 2 - d["simple"] = 2 - for name in ["All", "simple", "lineplot", "plot2d"]: - self.assertIn(name, lists) - arrays = lists[name] - i = self.content_widget.indexOf(arrays) - self.assertNotEqual(i, -1, msg="Missing the list in the widget!") - self.assertTrue( - self.content_widget.isItemEnabled(i), - msg="%s is not enabled!" % name, - ) - self.assertEqual( - arrays.count(), - d[name], - msg="Wrong number of arrays in %s" % name, - ) - if name == "plot2d": - self.assertEqual( - asstring(arrays.item(0).text()), - sp[0].psy._short_info(), - msg="Wrong text in plot2d", - ) - else: - self.assertEqual( - asstring(arrays.item(d[name] - 1).text()), - sp2[0]._short_info(), - msg="Wrong text in %s" % name, - ) - self.assertEqual( - self._selected_rows("plot2d"), - [], - msg="Array in %s is wrongly selected!" % name, - ) - self.assertEqual( - self._selected_rows("lineplot"), - [0], - msg="Array in %s is not selected!" % name, - ) - self.assertEqual( - self._selected_rows("simple"), [1], msg="Wrong selection!" - ) - self.assertEqual( - self._selected_rows("All"), [1], msg="Wrong selection!" - ) - - # close the project - full = sp + sp2 - full.close(True, True, True) - self.assertEqual(w.count(), 1) - self.assertEqual(w.indexOf(lists["All"]), 0) - self.assertFalse(w.isItemEnabled(0), msg='List "All" is enabled!') - - def test_select_all_button(self): - """Test whether the subproject is changed correctly when selecting all""" - self.window.showMaximized() - sp = psy.plot.plot2d( - self.get_file("test-t2m-u-v.nc"), name="t2m", time=[0, 1] - ) - psy.scp(None) - QTest.mouseClick(self.project_content.select_all_button, Qt.LeftButton) - self.assertIs( - psy.gcp()[0], - sp[0], - msg="actual: %s, expected: %s" % (psy.gcp(), sp), - ) - self.assertIs(psy.gcp()[1], sp[1]) - self.assertEqual( - self._selected_rows("All"), [0, 1], msg="Not all arrays selected!" - ) - - def test_unselect_all_button(self): - """Test whether the subproject is changed cleared when unselecting all""" - self.window.showMaximized() - psy.plot.plot2d( - self.get_file("test-t2m-u-v.nc"), name="t2m", time=[0, 1] - ) - # test whether the current subproject is not empty - self.assertTrue(bool(psy.gcp())) - # unselect all - QTest.mouseClick(self.project_content.unselect_button, Qt.LeftButton) - self.assertFalse(bool(psy.gcp())) - - def test_item_selection(self): - """Test whether the subproject is changed correctly if the selection in - the list changes""" - sp = psy.plot.plot2d( - self.get_file("test-t2m-u-v.nc"), name="t2m", time=[0, 1] - ) - self.assertIs(psy.gcp()[0], sp[0]) - self.assertIs(psy.gcp()[1], sp[1]) - self.content_widget.lists["All"].item(0).setSelected(False) - self.assertIs(psy.gcp()[0], sp[1]) - self.content_widget.lists["All"].item(0).setSelected(True) - self.assertIs(psy.gcp()[0], sp[0], msg="Reselection failed!") - self.assertIs(psy.gcp()[1], sp[1], msg="Reselection failed!") - - -class FiguresTreeTest(bt.PsyPlotGuiTestCase): - """Test to check whether the figures tree behaves correctly""" - - @property - def tree(self): - return self.window.figures_tree - - def test_toplevel(self): - """Test whether the figures are updated correctly""" - - def check_figs(msg=None): - figs = iter(sp.figs) - for item in map( - self.tree.topLevelItem, range(self.tree.topLevelItemCount()) - ): - self.assertEqual( - asstring(item.text(0)), - next(figs).canvas.manager.get_window_title(), - msg=msg, - ) - - sp = psy.plot.plot2d( - self.get_file("test-t2m-u-v.nc"), name="t2m", time=[0, 1] - ) - check_figs() - sp[1:].close(True, True) - check_figs("Figures not updated correctly!") - - def test_sublevel(self): - """Test whether the arrays are updated correctly""" - - def check_figs(msg=None): - arrays = iter(sp) - for i, (fig, val) in enumerate(sp.figs.items()): - top = self.tree.topLevelItem(i) - self.assertEqual( - asstring(top.text(0)), - fig.canvas.manager.get_window_title(), - ) - for child in map(top.child, range(top.childCount())): - self.assertEqual( - asstring(child.text(0)), - next(arrays).psy._short_info(), - msg=msg, - ) - - sp = psy.plot.plot2d( - self.get_file("test-t2m-u-v.nc"), - name="t2m", - time=[0, 1, 2], - ax=(1, 2), - ) - check_figs() - sp[1:2].close(False, True) - sp = sp[0::2] - check_figs("Arrays not updated correctly!") - sp.close(True, True) - self.assertEqual(self.tree.topLevelItemCount(), 0) - - -class DatasetTreeTest(bt.PsyPlotGuiTestCase): - """Test to check whether the dataset tree behaves correctly""" - - @property - def tree(self): - return self.window.ds_tree - - def test_toplevel(self): - """Test whether the toplevel items are shown correctly""" - fname = self.get_file("test-t2m-u-v.nc") - sp1 = psy.plot.plot2d(fname, name="t2m") - sp2 = psy.plot.plot2d(fname, name="t2m") - count = next(psyd._ds_counter) - 1 - fname = osp.basename(fname) - ds1 = sp1[0].psy.base - ds2 = sp2[0].psy.base - - self.assertEqual(self.tree.topLevelItemCount(), 2) - self.assertEqual( - asstring(self._get_toplevel_item(ds1).text(0)), - "%i: %s" % (count - 1, fname), - ) - self.assertEqual( - asstring(self._get_toplevel_item(ds2).text(0)), - "*%i: %s" % (count, fname), - ) - psy.scp(sp1) - self.assertEqual( - asstring(self._get_toplevel_item(ds1).text(0)), - "*%i: %s" % (count - 1, fname), - ) - self.assertEqual( - asstring(self._get_toplevel_item(ds2).text(0)), - "%i: %s" % (count, fname), - ) - sp2.close(True, True) - self.assertEqual( - asstring(self._get_toplevel_item(ds1).text(0)), - "*%i: %s" % (count - 1, fname), - ) - self.assertEqual(self.tree.topLevelItemCount(), 1) - - def _get_toplevel_item(self, ds): - toplevel = None - for item in map( - self.tree.topLevelItem, range(self.tree.topLevelItemCount()) - ): - if item.ds() is ds: - toplevel = item - break - self.assertIsNotNone( - toplevel, msg="No item found that corresponds to %s" % ds - ) - return toplevel - - def _test_ds_representation(self, ds): - toplevel = self._get_toplevel_item(ds) - coords = set(ds.coords) - variables = set(ds.variables) - coords - for child in map( - toplevel.variables.child, range(toplevel.variables.childCount()) - ): - variables.remove(asstring(child.text(0))) - self.assertEqual( - len(variables), 0, msg="Variables not found: %s" % (variables) - ) - for child in map( - toplevel.coords.child, range(toplevel.coords.childCount()) - ): - coords.remove(asstring(child.text(0))) - self.assertEqual( - len(coords), 0, msg="Coordinates not found: %s" % (coords) - ) - - def test_sublevel(self): - """Test whether the variables and coordinates are displayed correctly""" - sp = psy.plot.plot2d(self.get_file("test-t2m-u-v.nc"), name="t2m") - ds = sp[0].psy.base - self._test_ds_representation(ds) - - def test_refresh(self): - """Test the refreshing of a dataset""" - fname = self.get_file("test-t2m-u-v.nc") - sp1 = psy.plot.plot2d(fname, name="t2m") - sp2 = psy.plot.plot2d(fname, name="t2m") - ds = sp1[0].psy.base - ds["test"] = xr.Variable(("testdim",), list(range(5))) - item = self.tree.topLevelItem(0) - self.tree.refresh_items(item) - self._test_ds_representation(ds) - self._test_ds_representation(sp2[0].psy.base) - - def test_refresh_all(self): - """Test the refreshing of a dataset""" - fname = self.get_file("test-t2m-u-v.nc") - sp1 = psy.plot.plot2d(fname, name="t2m") - sp2 = psy.plot.plot2d(fname, name="t2m") - ds = sp1[0].psy.base - ds["test"] = xr.Variable(("testdim",), list(range(5))) - ds2 = sp2[0].psy.base - ds2["test2"] = list(range(10)) - self.tree.refresh_items() - self._test_ds_representation(ds) - self._test_ds_representation(ds2) - - def test_expansion_reset(self): - """Test whether the expansion state is recovered""" - fname = self.get_file("test-t2m-u-v.nc") - psy.plot.plot2d(fname, name="t2m") - self.tree.expandItem(self.tree.topLevelItem(0)) - self.tree.expandItem(self.tree.topLevelItem(0).child(1)) - - # trigger an update - psy.plot.plot2d(fname, name="t2m") - self.assertTrue(self.tree.topLevelItem(0).isExpanded()) - self.assertFalse(self.tree.topLevelItem(0).child(0).isExpanded()) - self.assertTrue(self.tree.topLevelItem(0).child(1).isExpanded()) - self.assertFalse(self.tree.topLevelItem(0).child(2).isExpanded()) - - def test_make_plot(self): - """Test the making of plots""" - fname = self.get_file("test-t2m-u-v.nc") - sp1 = psy.plot.plot2d(fname, name="t2m") - # to make sure, have in the mean time another dataset in the current - # subproject, we create a second plot - psy.plot.plot2d(fname, name="t2m") - ds = sp1[0].psy.base - name = "t2m" - self.tree.make_plot(ds, name) - try: - self.window.plot_creator.pm_combo.setCurrentText("plot2d") - except AttributeError: - self.window.plot_creator.pm_combo.setEditText("plot2d") - QTest.mouseClick( - self.window.plot_creator.bbox.button(QDialogButtonBox.Ok), - Qt.LeftButton, - ) - self.assertIs(ds, psy.gcp()[0].psy.base) - - -if __name__ == "__main__": - unittest.main() diff --git a/todos.html b/todos.html new file mode 100644 index 0000000..d821220 --- /dev/null +++ b/todos.html @@ -0,0 +1,300 @@ + + + + + + + ToDos — psyplot-gui documentation + + + + + + + + + + + + + + + + + + + + + + +
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+ + + + \ No newline at end of file diff --git a/tox.ini b/tox.ini deleted file mode 100644 index d077345..0000000 --- a/tox.ini +++ /dev/null @@ -1,23 +0,0 @@ -; SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH -; -; SPDX-License-Identifier: CC0-1.0 - -[tox] - -[testenv] -extras = - testsite - -commands = - ; mypy psyplot_gui - isort --check psyplot_gui - black --line-length 79 --check psyplot_gui - ; blackdoc --check psyplot_gui - flake8 psyplot_gui - pytest -v --cov=psyplot_gui -x - reuse lint - cffconvert --validate - -[pytest] -python_files = tests.py test_*.py *_tests.py -norecursedirs = .* build dist *.egg venv docs