From d650ee20502c2f51e0417400c109159f890f2cd5 Mon Sep 17 00:00:00 2001 From: Beth Cimini Date: Thu, 27 May 2021 16:21:21 -0400 Subject: [PATCH] Update run_batch_general.py --- run_batch_general.py | 22 +++++++++++----------- 1 file changed, 11 insertions(+), 11 deletions(-) diff --git a/run_batch_general.py b/run_batch_general.py index afbe92b..1f37f34 100644 --- a/run_batch_general.py +++ b/run_batch_general.py @@ -17,16 +17,16 @@ def scheduleBatch(self, data): print('Batch sent. Message ID:',response.get('MessageId')) #project specific stuff -topdirname='' #PROJECTNAME -projectname='' #PROJECTNAME -batchsuffix='' #BATCHNAME -rows=list(string.ascii_uppercase)[0:8] -columns=range(1,13) -sites=range(1,18) -platelist=[] # PLATEFOLDERNAMES -illumpipename='illum.cppipe' +topdirname='2019_07_11_JUMP-CP-pilots' #PROJECTNAME +projectname='2019_07_11_JUMP-CP-pilots' #PROJECTNAME +batchsuffix='2020_11_04_CPJUMP1' #BATCHNAME +rows=list(string.ascii_uppercase)[0:16] +columns=range(1,25) +sites=range(1,10) +platelist=['BR00117010','BR00117011'] # PLATEFOLDERNAMES +illumpipename='illum_without_batchfile.cppipe' qcpipename='qc.cppipe' -analysispipename='analysis.cppipe' +analysispipename='analysis_without_batchfile.cppipe' batchpipenameillum='Batch_data_illum.h5' batchpipename='Batch_data.h5' @@ -148,8 +148,8 @@ def MakeAnalysisJobs(mode='repurp'): print('Analysis job submitted. Check your queue') -#MakeIllumJobs(mode='batch') +#MakeIllumJobs(mode='repurp') #MakeQCJobs(repurp=True) #MakeQCJobs_persite(repurp=True) -#MakeAnalysisJobs(mode='batch') +#MakeAnalysisJobs(mode='repurp')